Transcription factor ABORTED
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| bHLH-MYC_N | PF14215 | 58 - 210 | 1.4e-20 | bHLH-MYC and R2R3-MYB transcription factors N-terminal |
| HLH | PF00010 | 406 - 449 | 2.1e-11 | Helix-loop-helix DNA-binding domain |
| bHLH-TF_ACT-like_plant | PF22754 | 546 - 621 | 1.5e-11 | Plant bHLH transcription factor, ACT-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 846, 1094 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 460 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 677 |
| AccI | GTMKAC | 1 cut(s) | 1465 |
| AclWI | GGATC | 6 cut(s) | 12, 449, 740, 753, 860, 1056 |
| AcsI | RAATTY | 1 cut(s) | 1081 |
| AcuI | CTGAAG | 1 cut(s) | 1759 |
| AcyI | GRCGYC | 1 cut(s) | 1062 |
| AfaI | GTAC | 4 cut(s) | 84, 295, 511, 597 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 194, 560, 677 |
| AgsI | TTSAA | 8 cut(s) | 48, 202, 257, 602, 863, 1086, 1126, 1832 |
| AhlI | ACTAGT | 3 cut(s) | 512, 568, 1825 |
| AjnI | CCWGG | 3 cut(s) | 539, 559, 1699 |
| Alw21I | GWGCWC | 2 cut(s) | 1695, 1736 |
| Alw26I | GTCTC | 4 cut(s) | 446, 980, 1579, 1792 |
| AlwI | GGATC | 6 cut(s) | 12, 449, 740, 753, 860, 1056 |
| AoxI | GGCC | 1 cut(s) | 1203 |
| ApeKI | GCWGC | 4 cut(s) | 129, 799, 1424, 1890 |
| ApoI | RAATTY | 1 cut(s) | 1081 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 233, 265, 529, 561 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 882, 1667, 1682 |
| AspLEI | GCGC | 1 cut(s) | 1890 |
| AspS9I | GGNCC | 4 cut(s) | 537, 668, 904, 1024 |
| AsuC2I | CCSGG | 1 cut(s) | 439 |
| AsuHPI | GGTGA | 3 cut(s) | 1915, 1937, 1952 |
| AvaII | GGWCC | 4 cut(s) | 537, 668, 904, 1024 |
| BamHI | GGATCC | 1 cut(s) | 745 |
| BanII | GRGCYC | 1 cut(s) | 1736 |
| BbsI | GAAGAC | 5 cut(s) | 246, 321, 408, 609, 1675 |
| Bbv12I | GWGCWC | 2 cut(s) | 1695, 1736 |
| BbvCI | CCTCAGC | 1 cut(s) | 1161 |
| BbvI | GCAGC | 4 cut(s) | 116, 811, 1411, 1902 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 764, 798 |
| BciT130I | CCWGG | 3 cut(s) | 541, 561, 1701 |
| BciVI | GTATCC | 1 cut(s) | 355 |
| BclI | TGATCA | 7 cut(s) | 943, 1141, 1147, 1384, 1390, 1480, 1522 |
| BcnI | CCSGG | 1 cut(s) | 439 |
| BcoDI | GTCTC | 4 cut(s) | 446, 980, 1579, 1792 |
| BcuI | ACTAGT | 3 cut(s) | 512, 568, 1825 |
| BfaI | CTAG | 8 cut(s) | 137, 431, 513, 569, 771, 1770, 1826, 1859 |
| BfmI | CTRYAG | 2 cut(s) | 342, 1116 |
| BfuI | GTATCC | 1 cut(s) | 355 |
| BisI | GCNGC | 4 cut(s) | 130, 800, 1425, 1891 |
| BlpI | GCTNAGC | 1 cut(s) | 1512 |
| BlsI | GCNGC | 4 cut(s) | 131, 801, 1426, 1892 |
| BmcAI | AGTACT | 4 cut(s) | 84, 295, 511, 597 |
| Bme1390I | CCNGG | 4 cut(s) | 439, 541, 561, 1701 |
| Bme18I | GGWCC | 4 cut(s) | 537, 668, 904, 1024 |
| BmgT120I | GGNCC | 4 cut(s) | 537, 668, 904, 1024 |
| BmiI | GGNNCC | 5 cut(s) | 426, 538, 747, 1544, 1632 |
| BmrFI | CCNGG | 4 cut(s) | 439, 541, 561, 1701 |
| BmsI | GCATC | 8 cut(s) | 385, 540, 1147, 1159, 1309, 1452, 1769, 1919 |
| BpiI | GAAGAC | 5 cut(s) | 246, 321, 408, 609, 1675 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1161 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 2 cut(s) | 282, 1620 |
| BpuMI | CCSGG | 1 cut(s) | 439 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1146, 1383, 1389, 1662 |
| BsaHI | GRCGYC | 1 cut(s) | 1062 |
| BsaJI | CCNNGG | 1 cut(s) | 540 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 555, 585 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 194, 560, 677 |
| Bse1I | ACTGG | 3 cut(s) | 332, 1027, 1195 |
| Bse3DI | GCAATG | 2 cut(s) | 957, 966 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1146, 1383, 1389, 1662 |
| BseBI | CCWGG | 3 cut(s) | 541, 561, 1701 |
| BseDI | CCNNGG | 1 cut(s) | 540 |
| BseGI | GGATG | 7 cut(s) | 212, 267, 376, 834, 1171, 1324, 1951 |
| BseJI | GATNNNNATC | 4 cut(s) | 1146, 1383, 1389, 1662 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 194, 560, 677 |
| BseMI | GCAATG | 2 cut(s) | 957, 966 |
| BseMII | CTCAG | 5 cut(s) | 660, 1143, 1152, 1503, 1730 |
| BseNI | ACTGG | 3 cut(s) | 332, 1027, 1195 |
| BseRI | GAGGAG | 1 cut(s) | 1198 |
| BseXI | GCAGC | 4 cut(s) | 116, 811, 1411, 1902 |
| BseYI | CCCAGC | 1 cut(s) | 749 |
| BsgI | GTGCAG | 1 cut(s) | 537 |
| BshFI | GGCC | 1 cut(s) | 1205 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1695, 1736 |
| BsiSI | CCGG | 3 cut(s) | 438, 1065, 1560 |
| BslFI | GGGAC | 4 cut(s) | 224, 295, 550, 1862 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 194, 560, 677 |
| BsmAI | GTCTC | 4 cut(s) | 446, 980, 1579, 1792 |
| BsmFI | GGGAC | 4 cut(s) | 224, 295, 550, 1862 |
| BsnI | GGCC | 1 cut(s) | 1205 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1695, 1736 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1512 |
| BspANI | GGCC | 1 cut(s) | 1205 |
| BspCNI | CTCAG | 5 cut(s) | 659, 1142, 1153, 1504, 1731 |
| BspHI | TCATGA | 6 cut(s) | 144, 697, 1051, 1144, 1387, 1414 |
| BspLI | GGNNCC | 5 cut(s) | 426, 538, 747, 1544, 1632 |
| BspMAI | CTGCAG | 1 cut(s) | 346 |
| BspPI | GGATC | 6 cut(s) | 12, 449, 740, 753, 860, 1056 |
| BsrDI | GCAATG | 2 cut(s) | 957, 966 |
| BsrI | ACTGG | 3 cut(s) | 332, 1027, 1195 |
| BssECI | CCNNGG | 1 cut(s) | 540 |
| BssNAI | GTATAC | 1 cut(s) | 1466 |
| BssNI | GRCGYC | 1 cut(s) | 1062 |
| Bst1107I | GTATAC | 1 cut(s) | 1466 |
| Bst2UI | CCWGG | 3 cut(s) | 541, 561, 1701 |
| Bst4CI | ACNGT | 5 cut(s) | 532, 839, 937, 969, 1463 |
| BstACI | GRCGYC | 1 cut(s) | 1062 |
| BstC8I | GCNNGC | 2 cut(s) | 134, 1203 |
| BstF5I | GGATG | 7 cut(s) | 212, 267, 376, 834, 1171, 1324, 1951 |
| BstHHI | GCGC | 1 cut(s) | 1890 |
| BstMAI | GTCTC | 4 cut(s) | 446, 980, 1579, 1792 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 38, 956, 1630, 1740, 1779 |
| BstNI | CCWGG | 3 cut(s) | 541, 561, 1701 |
| BstNSI | RCATGY | 2 cut(s) | 614, 1009 |
| BstSCI | CCNGG | 4 cut(s) | 437, 539, 559, 1699 |
| BstSFI | CTRYAG | 2 cut(s) | 342, 1116 |
| BstV1I | GCAGC | 4 cut(s) | 116, 811, 1411, 1902 |
| BstV2I | GAAGAC | 5 cut(s) | 246, 321, 408, 609, 1675 |
| BstX2I | RGATCY | 4 cut(s) | 4, 441, 745, 865 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1658, 1884 |
| BstYI | RGATCY | 4 cut(s) | 4, 441, 745, 865 |
| BstZ17I | GTATAC | 1 cut(s) | 1466 |
| BsuI | GTATCC | 1 cut(s) | 355 |
| BsuRI | GGCC | 1 cut(s) | 1205 |
| BtsCI | GGATG | 7 cut(s) | 212, 267, 376, 834, 1171, 1324, 1951 |
| BtsI | GCAGTG | 2 cut(s) | 1144, 1442 |
| BtsIMutI | CAGTG | 2 cut(s) | 1144, 1442 |
| Cac8I | GCNNGC | 2 cut(s) | 134, 1203 |
| CciI | TCATGA | 6 cut(s) | 144, 697, 1051, 1144, 1387, 1414 |
| CfoI | GCGC | 1 cut(s) | 1890 |
| Cfr13I | GGNCC | 4 cut(s) | 537, 668, 904, 1024 |
| CseI | GACGC | 1 cut(s) | 1070 |
| CsiI | ACCWGGT | 1 cut(s) | 1699 |
| Csp6I | GTAC | 4 cut(s) | 83, 294, 510, 596 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1684, 1719 |
| CviQI | GTAC | 4 cut(s) | 83, 294, 510, 596 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 460 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 460 |
| Ecl136II | GAGCTC | 1 cut(s) | 1734 |
| Eco24I | GRGCYC | 1 cut(s) | 1736 |
| Eco47I | GGWCC | 4 cut(s) | 537, 668, 904, 1024 |
| Eco53kI | GAGCTC | 1 cut(s) | 1734 |
| Eco57I | CTGAAG | 1 cut(s) | 1759 |
| EcoICRI | GAGCTC | 1 cut(s) | 1734 |
| EcoRI | GAATTC | 1 cut(s) | 1081 |
| EcoRII | CCWGG | 3 cut(s) | 539, 559, 1699 |
| EcoT22I | ATGCAT | 1 cut(s) | 1011 |
| EcoT38I | GRGCYC | 1 cut(s) | 1736 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 306, 338, 1359, 1391 |
| FaqI | GGGAC | 4 cut(s) | 224, 295, 550, 1862 |
| FauNDI | CATATG | 1 cut(s) | 1011 |
| FbaI | TGATCA | 7 cut(s) | 943, 1141, 1147, 1384, 1390, 1480, 1522 |
| FblI | GTMKAC | 1 cut(s) | 1465 |
| Fnu4HI | GCNGC | 4 cut(s) | 130, 800, 1425, 1891 |
| FokI | GGATG | 7 cut(s) | 219, 274, 363, 841, 1178, 1331, 1938 |
| FriOI | GRGCYC | 1 cut(s) | 1736 |
| Fsp4HI | GCNGC | 4 cut(s) | 130, 800, 1425, 1891 |
| FspBI | CTAG | 8 cut(s) | 137, 431, 513, 569, 771, 1770, 1826, 1859 |
| GlaI | GCGC | 1 cut(s) | 1889 |
| GluI | GCNGC | 4 cut(s) | 130, 800, 1425, 1891 |
| GsaI | CCCAGC | 1 cut(s) | 753 |
| HaeIII | GGCC | 1 cut(s) | 1205 |
| HapII | CCGG | 3 cut(s) | 438, 1065, 1560 |
| HgaI | GACGC | 1 cut(s) | 1070 |
| HhaI | GCGC | 1 cut(s) | 1890 |
| Hin1I | GRCGYC | 1 cut(s) | 1062 |
| Hin6I | GCGC | 1 cut(s) | 1888 |
| HinP1I | GCGC | 1 cut(s) | 1888 |
| HincII | GTYRAC | 1 cut(s) | 1501 |
| HindII | GTYRAC | 1 cut(s) | 1501 |
| HindIII | AAGCTT | 2 cut(s) | 673, 1241 |
| HinfI | GANTC | 7 cut(s) | 434, 658, 705, 1486, 1592, 1663, 1850 |
| HpaII | CCGG | 3 cut(s) | 438, 1065, 1560 |
| HphI | GGTGA | 3 cut(s) | 1915, 1937, 1952 |
| Hpy166II | GTNNAC | 5 cut(s) | 685, 807, 1466, 1501, 1823 |
| Hpy188I | TCNGA | 9 cut(s) | 892, 1132, 1182, 1474, 1485, 1597, 1740, 1778, 1915 |
| Hpy8I | GTNNAC | 5 cut(s) | 685, 807, 1466, 1501, 1823 |
| Hpy99I | CGWCG | 1 cut(s) | 1898 |
| HpyAV | CCTTC | 3 cut(s) | 359, 1227, 1412 |
| HpyCH4III | ACNGT | 5 cut(s) | 532, 839, 937, 969, 1463 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 38, 956, 1630, 1740, 1779 |
| Hsp92I | GRCGYC | 1 cut(s) | 1062 |
| HspAI | GCGC | 1 cut(s) | 1888 |
| Ksp22I | TGATCA | 7 cut(s) | 943, 1141, 1147, 1384, 1390, 1480, 1522 |
| LmnI | GCTCC | 3 cut(s) | 631, 1537, 1630 |
| Lsp1109I | GCAGC | 4 cut(s) | 116, 811, 1411, 1902 |
| LweI | GCATC | 8 cut(s) | 385, 540, 1147, 1159, 1309, 1452, 1769, 1919 |
| MabI | ACCWGGT | 1 cut(s) | 1699 |
| MaeI | CTAG | 8 cut(s) | 137, 431, 513, 569, 771, 1770, 1826, 1859 |
| MaeIII | GTNAC | 3 cut(s) | 369, 1750, 1765 |
| MflI | RGATCY | 4 cut(s) | 4, 441, 745, 865 |
| MhlI | GDGCHC | 2 cut(s) | 1695, 1736 |
| MluCI | AATT | 9 cut(s) | 72, 723, 778, 853, 881, 919, 1016, 1081, 1917 |
| MlyI | GAGTC | 3 cut(s) | 428, 1495, 1844 |
| MmeI | TCCRAC | 2 cut(s) | 1275, 1477 |
| Mph1103I | ATGCAT | 1 cut(s) | 1011 |
| MroXI | GAANNNNTTC | 3 cut(s) | 882, 1667, 1682 |
| MseI | TTAA | 4 cut(s) | 458, 482, 1245, 1506 |
| MslI | CAYNNNNRTG | 5 cut(s) | 977, 1010, 1413, 1419, 1882 |
| MspA1I | CMGCKG | 1 cut(s) | 129 |
| MspI | CCGG | 3 cut(s) | 438, 1065, 1560 |
| MspR9I | CCNGG | 4 cut(s) | 439, 541, 561, 1701 |
| MvaI | CCWGG | 3 cut(s) | 541, 561, 1701 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 38, 956, 1630, 1740, 1779 |
| NciI | CCSGG | 1 cut(s) | 439 |
| NdeI | CATATG | 1 cut(s) | 1011 |
| NlaIV | GGNNCC | 5 cut(s) | 426, 538, 747, 1544, 1632 |
| NmuCI | GTSAC | 1 cut(s) | 1765 |
| NsiI | ATGCAT | 1 cut(s) | 1011 |
| NspI | RCATGY | 2 cut(s) | 614, 1009 |
| PagI | TCATGA | 6 cut(s) | 144, 697, 1051, 1144, 1387, 1414 |
| PdmI | GAANNNNTTC | 3 cut(s) | 882, 1667, 1682 |
| PfeI | GAWTC | 4 cut(s) | 658, 705, 1592, 1663 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 677 |
| PfoI | TCCNGGA | 1 cut(s) | 437 |
| PkrI | GCNGC | 4 cut(s) | 131, 801, 1426, 1892 |
| PleI | GAGTC | 3 cut(s) | 428, 1494, 1844 |
| PpsI | GAGTC | 3 cut(s) | 428, 1494, 1844 |
| PsiI | TTATAA | 2 cut(s) | 846, 1094 |
| Psp124BI | GAGCTC | 1 cut(s) | 1736 |
| Psp6I | CCWGG | 3 cut(s) | 539, 559, 1699 |
| PspFI | CCCAGC | 1 cut(s) | 749 |
| PspGI | CCWGG | 3 cut(s) | 539, 559, 1699 |
| PspN4I | GGNNCC | 5 cut(s) | 426, 538, 747, 1544, 1632 |
| PspPI | GGNCC | 4 cut(s) | 537, 668, 904, 1024 |
| PstI | CTGCAG | 1 cut(s) | 346 |
| PsuI | RGATCY | 4 cut(s) | 4, 441, 745, 865 |
| PvuII | CAGCTG | 1 cut(s) | 129 |
| RsaI | GTAC | 4 cut(s) | 84, 295, 511, 597 |
| RsaNI | GTAC | 4 cut(s) | 83, 294, 510, 596 |
| RseI | CAYNNNNRTG | 5 cut(s) | 977, 1010, 1413, 1419, 1882 |
| SacI | GAGCTC | 1 cut(s) | 1736 |
| SaqAI | TTAA | 4 cut(s) | 458, 482, 1245, 1506 |
| SatI | GCNGC | 4 cut(s) | 130, 800, 1425, 1891 |
| Sau96I | GGNCC | 4 cut(s) | 537, 668, 904, 1024 |
| ScaI | AGTACT | 4 cut(s) | 84, 295, 511, 597 |
| SchI | GAGTC | 3 cut(s) | 428, 1495, 1844 |
| ScrFI | CCNGG | 4 cut(s) | 439, 541, 561, 1701 |
| SduI | GDGCHC | 2 cut(s) | 1695, 1736 |
| SexAI | ACCWGGT | 1 cut(s) | 1699 |
| SfaNI | GCATC | 8 cut(s) | 385, 540, 1147, 1159, 1309, 1452, 1769, 1919 |
| SfcI | CTRYAG | 2 cut(s) | 342, 1116 |
| SinI | GGWCC | 4 cut(s) | 537, 668, 904, 1024 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 977, 1010, 1413, 1419, 1882 |
| SmlI | CTYRAG | 2 cut(s) | 297, 1635 |
| SmoI | CTYRAG | 2 cut(s) | 297, 1635 |
| SpeI | ACTAGT | 3 cut(s) | 512, 568, 1825 |
| Sse9I | AATT | 9 cut(s) | 72, 723, 778, 853, 881, 919, 1016, 1081, 1917 |
| SspI | AATATT | 1 cut(s) | 1090 |
| SspMI | CTAG | 8 cut(s) | 137, 431, 513, 569, 771, 1770, 1826, 1859 |
| SstI | GAGCTC | 1 cut(s) | 1736 |
| StyD4I | CCNGG | 4 cut(s) | 437, 539, 559, 1699 |
| TaaI | ACNGT | 5 cut(s) | 532, 839, 937, 969, 1463 |
| TaqI | TCGA | 3 cut(s) | 98, 506, 713 |
| TasI | AATT | 9 cut(s) | 72, 723, 778, 853, 881, 919, 1016, 1081, 1917 |
| TatI | WGTACW | 4 cut(s) | 82, 293, 509, 595 |
| TfiI | GAWTC | 4 cut(s) | 658, 705, 1592, 1663 |
| Tru1I | TTAA | 4 cut(s) | 458, 482, 1245, 1506 |
| Tru9I | TTAA | 4 cut(s) | 458, 482, 1245, 1506 |
| TscAI | CASTG | 2 cut(s) | 1144, 1442 |
| TseFI | GTSAC | 1 cut(s) | 1765 |
| TseI | GCWGC | 4 cut(s) | 129, 799, 1424, 1890 |
| Tsp45I | GTSAC | 1 cut(s) | 1765 |
| TspGWI | ACGGA | 1 cut(s) | 644 |
| TspRI | CASTG | 2 cut(s) | 1144, 1442 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 677 |
| VpaK11BI | GGWCC | 4 cut(s) | 537, 668, 904, 1024 |
| XapI | RAATTY | 1 cut(s) | 1081 |
| XceI | RCATGY | 2 cut(s) | 614, 1009 |
| XmiI | GTMKAC | 1 cut(s) | 1465 |
| XmnI | GAANNNNTTC | 3 cut(s) | 882, 1667, 1682 |
| XspI | CTAG | 8 cut(s) | 137, 431, 513, 569, 771, 1770, 1826, 1859 |
| ZrmI | AGTACT | 4 cut(s) | 84, 295, 511, 597 |
| Zsp2I | ATGCAT | 1 cut(s) | 1011 |