Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0010177

Physical Location & Seq

Genomic Coordinates Forward (+)

35852008 .. 35855180

Gene Structure 3173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1264800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGGCTATCAATATTTTTAATTTTCTTGTTTGTTTCTCTATTGCTTCCTTTGTCATTTCTTCCAATGCCAGAAGAGTTCTAGACTCGAAAAATGTAGACGGTAACAATGGCGGTAGCAATTTCACTCATGTATGTGATCCTTCAAGGTTTTCCGACCTTGGCTTGGATGTGTCAACCTTTGGCTTCTGCGACTCCAAATTGTCGTATGACGATAGGGCCAAGGATTTGGTAGATAGGATGACATTGGCAGAGAAAGTGAGGCAACTAGGAAATAGTGCAAAGGGGGTTCCGAGGTTGGGGTTGCCTAAGTATGAGTGGTGGTCTGAGGCACTCCATGGTGTGTCGAATGTTGGTCCCGGGACTTATTTCGATGATCTTATTCCGGGTGCAACAAGCTTTCCCACTGTTATTCTTACAACCGCAGCATTCAACGAGTCATTGTGGAAGCAAATTGGTCAGGCTGTTTCAACAGAAGCAAGAGCCATGTACAATCTAGGAAGAGCCGGATTGACATATTGGAGTCCCAACGTTAATGTCGTGAGGGATCCAAGGTGGGGAAGAGCCACGGAAACACCCGGTGAAGACCCTTACGTTGTTGGCGTTTATGCCTCTAACTACGTCAGAGGCTTGCAGGATGTTAAGGGCACAGAGAATGCCACAGATTTGAACTCTAGACCTCTAAAAGTTTCCTCATGCTGCAAGCATTATGCCGCCTACGATGTAGACAACTGGCTCGGTGTCGATCGTTACCATTTTGATGCGAGGGTGACAGAGCAAGATATGGCGGAAACTTTCCTAAAACCGTTCGAGATGTGTATTAAGGATGGTGATGTAAGCAGTGTAATGTGCTCTTATAACCGTGTTAACGGCATCCCCACTTGTGCTGATCCGAAGCTCTTGAAAGAAACCATTAGAGGAGATTGGGATCTTCATGGATATATAGTCTCGGATTGTGACTCTCTTGAAGTTATGGTGAACGGCCACAAATGGCTCGGCGACACCAAGGAGGATGCTGCTGCACAAGCTTTGAAAGCAGGAATGGATTTGGACTGTGGAGTCTACTACACAAACTTCACTCAGAATTCGGTGAGGCAAGGGAAAGTGAAGGAGGTAGAAATCGACCGGTCACTCAAGAACCTTTATGTGGTGCTTATGAGGCTAGGTTTCTTCGATGGGAATCCCACTTTCAAGTCTCTCGGCAAGAAGGATGTGTGCTCCAAACAACATATTGAATTAGCAACAGAAGCGGCAAGAGAAGGAATCGTTTTATTGAAGAATGTCAATGAAACTTTGCCGTTGAAATCTAAGAAAATAAAAAAACTAGCCGTCGTTGGGCCTCATGCCAATGCTACAGCAGCAATGATTGGAAACTATGCAGGTATTCCTTGTCAATTCACTTCACCTCTCGATGCATTTTCATCCTACGGAGAAGTCAAGTATGGAATGGGATGTGATGGAGTTGCATGTGCAAATGATAGTCTGATATTCCCTGCCATGAAAGCCGCAAAGCATGCAGATGCAACCATAATTTTTGCTGGTTTGGACTTATCAGTTGAGGCAGAGAGCTTGGATAGGGTGGATCTGCTTCTTCCTGGCTACCAAACCCTGTTTATCAATCAGGTCGCTCAAGTCTCCAAGGGTCCGGTAATTCTTGTAATTATGTCTGCTGGTGGTGTTGATATCAGTTTTGCCAAACAAAATGATAACATCAATGCAATATTGTGGGCTGGGTACCCGGGGGAGGAAGGCGGCCATGCCATTGCAGATGTTGTTTTTGGACATTACAATCCTGGAGGAAGATTGCCTCTTACATGGTACGAAGCTGGTTATGTGGATATGCTACCCATGACATCCATGAAATTGAGGCCAATCGATAGCCTAGGCTATCCCGGTCGTACATACAAATTCTACAATGGCTCCACAGTTTACCCATTCGGATATGGCCTTAGCTACACCCAGTTCAACTACACCCTGCGATCTGCAGAGAGATCTCTGGATATAAAGTTGAGAAAGTCCCAACACTGCCGTGACATAGAGTACAAGGATAATGAATACAAGCCACCTTGCCCTTCAGTCCTTATCGACGACTTGGAATGCAACCATGAATTTGGGTTCGGGATTGAAGTAAAAAATGTGGGTAAGAGAGATGGAAGTGAAGTCATCATCGTTTACTCAAAACCACCTATTGGCATCGCCGCTTCACATACCAAGCAGGTGATTGGGTTTAAGAGGGTCTTTGTGAAAGCCGGAAAGAGCAAAACTGTTAACTTTGTGTTCAATGCCTGCAAGAGCTTGGGAGTTGTCAACTACAATGCTTACAATCTTCTGACATCAGGCAGACACACTATTATGCTTGGAGATGATGTCGTCTCCTTCCCCATTCAACTCAACATTAAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

801

Amino Acids

88.05

Weight (kDa)

6.35

Isoelectric Point (pI)

29.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	129 - 379	3.5e-34	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	421 - 651	2.7e-49	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	719 - 788	1e-08	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09700
fragaria_vesca	FvH4_3g05990
malus_domestica	MD05G1287500.v1.1 MD05G1287700.v1.1 MD05G1288600.v1.1 MD10G1264800.v1.1 MD17G1089800.v1.1
prunus_persica	Prupe.4G077200_v2.0.a1
pyrus_communis	pycom05g26600
rosa_chinensis	RchiOBHm_Chr5g0013421
rosa_laevigata	RLG00000032018
rosa_multiflora	Rmu_sc0003458.1_g000016 Rmu_sc0003458.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063140
rosa_rugosa	Rorug05G0009200 Rorug05G0009300
rosa_samantha	Rh5AG104600 Rh5BG100900 Rh5CG112800 Rh5DG099500
rosa_wichuraiana	Rw5G009120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	855
AarI	CACCTGC	1 cut(s)	2203
AasI	GACNNNNNNGTC	1 cut(s)	1055
Acc36I	ACCTGC	2 cut(s)	1367, 2203
Acc65I	GGTACC	1 cut(s)	1731
AccB1I	GGYRCC	1 cut(s)	1731
AccB7I	CCANNNNNTGG	1 cut(s)	2186
AccI	GTMKAC	3 cut(s)	96, 723, 1059
AciI	CCGC	8 cut(s)	111, 420, 711, 785, 1247, 1503, 1749, 2196
AclI	AACGTT	1 cut(s)	528
AclWI	GGATC	6 cut(s)	131, 539, 552, 881, 933, 1587
AcoI	YGGCCR	2 cut(s)	979, 1750
AcsI	RAATTY	3 cut(s)	1081, 1904, 2105
AcuI	CTGAAG	1 cut(s)	2055
AdeI	CACNNNGTG	1 cut(s)	578
AfaI	GTAC	5 cut(s)	488, 1733, 1817, 1897, 2039
AfiI	CCNNNNNNNGG	7 cut(s)	163, 296, 554, 1144, 1332, 1741, 2186
AgeI	ACCGGT	1 cut(s)	1122
AjnI	CCWGG	2 cut(s)	1591, 1789
AleI	CACNNNNGTG	1 cut(s)	2025
AluBI	AGCT	7 cut(s)	396, 895, 1025, 1566, 1823, 1950, 2292
AluI	AGCT	7 cut(s)	396, 895, 1025, 1566, 1823, 1950, 2292
Alw21I	GWGCWC	2 cut(s)	851, 1217
Alw26I	GTCTC	4 cut(s)	949, 1197, 1636, 2374
AlwI	GGATC	6 cut(s)	131, 539, 552, 881, 933, 1587
Ama87I	CYCGRG	2 cut(s)	356, 1735
AoxI	GGCC	6 cut(s)	216, 979, 1334, 1750, 1865, 1942
ApeKI	GCWGC	5 cut(s)	422, 696, 1013, 1016, 1355
ApoI	RAATTY	3 cut(s)	1081, 1904, 2105
AsiGI	ACCGGT	1 cut(s)	1122
Asp718I	GGTACC	1 cut(s)	1731
AspA2I	CCTAGG	1 cut(s)	1879
AspS9I	GGNCC	4 cut(s)	216, 353, 1334, 1640
AsuC2I	CCSGG	7 cut(s)	357, 358, 384, 576, 1736, 1737, 1890
AsuHPI	GGTGA	7 cut(s)	590, 778, 839, 985, 1099, 1392, 2227
AvaI	CYCGRG	2 cut(s)	356, 1735
AvaII	GGWCC	2 cut(s)	353, 1640
AvrII	CCTAGG	1 cut(s)	1879
BaeGI	GKGCMC	1 cut(s)	647
BamHI	GGATCC	1 cut(s)	544
BanI	GGYRCC	1 cut(s)	1731
BbsI	GAAGAC	1 cut(s)	588
Bbv12I	GWGCWC	2 cut(s)	851, 1217
BbvI	GCAGC	5 cut(s)	434, 683, 1000, 1003, 1367
BccI	CCATC	4 cut(s)	818, 1166, 1448, 2141
BceAI	ACGGC	5 cut(s)	883, 994, 1279, 1310, 2010
BciT130I	CCWGG	2 cut(s)	1593, 1791
BcnI	CCSGG	7 cut(s)	357, 358, 384, 576, 1736, 1737, 1890
BcoDI	GTCTC	4 cut(s)	949, 1197, 1636, 2374
BfaI	CTAG	7 cut(s)	80, 266, 494, 672, 1160, 1322, 1880
BfmI	CTRYAG	2 cut(s)	1350, 1980
BfuAI	ACCTGC	2 cut(s)	1367, 2203
BglII	AGATCT	1 cut(s)	1988
BlnI	CCTAGG	1 cut(s)	1879
Bme1390I	CCNGG	9 cut(s)	357, 358, 384, 576, 1593, 1736, 1737, 1791, 1890
Bme18I	GGWCC	2 cut(s)	353, 1640
BmeT110I	CYCGRG	2 cut(s)	356, 1735
BmgT120I	GGNCC	4 cut(s)	216, 353, 1334, 1640
BmiI	GGNNCC	6 cut(s)	288, 355, 546, 1641, 1733, 1918
BmrFI	CCNGG	9 cut(s)	357, 358, 384, 576, 1593, 1736, 1737, 1791, 1890
BmrI	ACTGGG	1 cut(s)	1951
BmsI	GCATC	6 cut(s)	748, 879, 1000, 1399, 1507, 2199
BmuI	ACTGGG	1 cut(s)	1951
BpiI	GAAGAC	1 cut(s)	588
BpmI	CTGGAG	1 cut(s)	1812
Bpu10I	CCTNAGC	1 cut(s)	1946
BpuEI	CTTGAG	2 cut(s)	1115, 1611
BpuMI	CCSGG	7 cut(s)	357, 358, 384, 576, 1736, 1737, 1890
Bsa29I	ATCGAT	1 cut(s)	1872
BsaBI	GATNNNNATC	2 cut(s)	924, 1176
BsaWI	WCCGGW	2 cut(s)	1122, 1642
BsaXI	ACNNNNNCTCC	4 cut(s)	1901, 1931, 2349, 2379
Bsc4I	CCNNNNNNNGG	7 cut(s)	163, 296, 554, 1144, 1332, 1741, 2186
Bse118I	RCCGGY	1 cut(s)	1122
Bse1I	ACTGG	2 cut(s)	734, 1957
Bse3DI	GCAATG	2 cut(s)	1365, 1758
Bse8I	GATNNNNATC	2 cut(s)	924, 1176
BseBI	CCWGG	2 cut(s)	1593, 1791
BseCI	ATCGAT	1 cut(s)	1872
BseJI	GATNNNNATC	2 cut(s)	924, 1176
BseLI	CCNNNNNNNGG	7 cut(s)	163, 296, 554, 1144, 1332, 1741, 2186
BseMI	GCAATG	2 cut(s)	1365, 1758
BseMII	CTCAG	2 cut(s)	315, 1091
BseNI	ACTGG	2 cut(s)	734, 1957
BseRI	GAGGAG	1 cut(s)	930
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	5 cut(s)	434, 683, 1000, 1003, 1367
BseYI	CCCAGC	1 cut(s)	1727
BsgI	GTGCAG	1 cut(s)	1002
Bsh1285I	CGRYCG	3 cut(s)	745, 1123, 1894
BshFI	GGCC	6 cut(s)	218, 981, 1336, 1752, 1867, 1944
BshNI	GGYRCC	1 cut(s)	1731
BshTI	ACCGGT	1 cut(s)	1122
BshVI	ATCGAT	1 cut(s)	1872
BsiEI	CGRYCG	3 cut(s)	745, 1123, 1894
BsiHKAI	GWGCWC	2 cut(s)	851, 1217
BsiHKCI	CYCGRG	2 cut(s)	356, 1735
BsiSI	CCGG	9 cut(s)	357, 383, 504, 576, 1123, 1643, 1736, 1890, 2247
BslFI	GGGAC	4 cut(s)	339, 373, 507, 1999
BslI	CCNNNNNNNGG	7 cut(s)	163, 296, 554, 1144, 1332, 1741, 2186
BsmAI	GTCTC	4 cut(s)	949, 1197, 1636, 2374
BsmBI	CGTCTC	1 cut(s)	2374
BsmFI	GGGAC	4 cut(s)	339, 373, 507, 1999
BsmI	GAATGC	3 cut(s)	425, 658, 2099
BsnI	GGCC	6 cut(s)	218, 981, 1336, 1752, 1867, 1944
BsoBI	CYCGRG	2 cut(s)	356, 1735
Bsp1286I	GDGCHC	3 cut(s)	647, 851, 1217
Bsp1407I	TGTACA	1 cut(s)	486
Bsp143I	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
Bsp19I	CCATGG	1 cut(s)	334
BspACI	CCGC	8 cut(s)	111, 420, 711, 785, 1247, 1503, 1749, 2196
BspANI	GGCC	6 cut(s)	218, 981, 1336, 1752, 1867, 1944
BspCNI	CTCAG	2 cut(s)	316, 1090
BspDI	ATCGAT	1 cut(s)	1872
BspLI	GGNNCC	6 cut(s)	288, 355, 546, 1641, 1733, 1918
BspMAI	CTGCAG	1 cut(s)	1984
BspMI	ACCTGC	2 cut(s)	1367, 2203
BspPI	GGATC	6 cut(s)	131, 539, 552, 881, 933, 1587
BspQI	GCTCTTC	2 cut(s)	493, 553
BspT107I	GGYRCC	1 cut(s)	1731
BsrDI	GCAATG	2 cut(s)	1365, 1758
BsrFI	RCCGGY	1 cut(s)	1122
BsrGI	TGTACA	1 cut(s)	486
BsrI	ACTGG	2 cut(s)	734, 1957
BssAI	RCCGGY	1 cut(s)	1122
BssMI	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
BssT1I	CCWWGG	7 cut(s)	157, 219, 334, 548, 1002, 1635, 1879
Bst2UI	CCWGG	2 cut(s)	1593, 1791
Bst4CI	ACNGT	7 cut(s)	101, 406, 804, 860, 1052, 1924, 2263
Bst6I	CTCTTC	3 cut(s)	67, 493, 553
BstAPI	GCANNNNNTGC	1 cut(s)	1511
BstAUI	TGTACA	1 cut(s)	486
BstC8I	GCNNGC	4 cut(s)	629, 701, 1512, 2284
BstDEI	CTNAG	5 cut(s)	306, 324, 1077, 1305, 1946
BstDSI	CCRYGG	2 cut(s)	334, 564
BstKTI	GATC	9 cut(s)	139, 376, 547, 745, 889, 928, 1582, 1979, 1991
BstMAI	GTCTC	4 cut(s)	949, 1197, 1636, 2374
BstMBI	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
BstMCI	CGRYCG	3 cut(s)	745, 1123, 1894
BstMWI	GCNNNNNNNGC	7 cut(s)	1022, 1031, 1156, 1244, 1355, 1499, 1511
BstNI	CCWGG	2 cut(s)	1593, 1791
BstNSI	RCATGY	2 cut(s)	1467, 1514
BstSCI	CCNGG	9 cut(s)	355, 356, 382, 574, 1591, 1734, 1735, 1789, 1888
BstSFI	CTRYAG	2 cut(s)	1350, 1980
BstSLI	GKGCMC	1 cut(s)	647
BstV1I	GCAGC	5 cut(s)	434, 683, 1000, 1003, 1367
BstV2I	GAAGAC	1 cut(s)	588
BstX2I	RGATCY	4 cut(s)	544, 925, 1579, 1988
BstXI	CCANNNNNNTGG	2 cut(s)	226, 2108
BstYI	RGATCY	4 cut(s)	544, 925, 1579, 1988
Bsu15I	ATCGAT	1 cut(s)	1872
BsuRI	GGCC	6 cut(s)	218, 981, 1336, 1752, 1867, 1944
BsuTUI	ATCGAT	1 cut(s)	1872
BtgI	CCRYGG	2 cut(s)	334, 564
BtgZI	GCGATG	1 cut(s)	2176
BtsI	GCAGTG	2 cut(s)	844, 2020
BtsIMutI	CAGTG	3 cut(s)	402, 844, 2020
BveI	ACCTGC	2 cut(s)	1367, 2203
Cac8I	GCNNGC	4 cut(s)	629, 701, 1512, 2284
Cfr10I	RCCGGY	1 cut(s)	1122
Cfr13I	GGNCC	4 cut(s)	216, 353, 1334, 1640
Cfr9I	CCCGGG	2 cut(s)	356, 1735
ClaI	ATCGAT	1 cut(s)	1872
Csp6I	GTAC	5 cut(s)	487, 1732, 1816, 1896, 2038
CspAI	ACCGGT	1 cut(s)	1122
CviQI	GTAC	5 cut(s)	487, 1732, 1816, 1896, 2038
DdeI	CTNAG	5 cut(s)	306, 324, 1077, 1305, 1946
DpnI	GATC	9 cut(s)	138, 375, 546, 744, 888, 927, 1581, 1978, 1990
DpnII	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
DraIII	CACNNNGTG	1 cut(s)	578
DrdI	GACNNNNNNGTC	1 cut(s)	1055
DseDI	GACNNNNNNGTC	1 cut(s)	1055
EaeI	YGGCCR	2 cut(s)	979, 1750
Eam1104I	CTCTTC	3 cut(s)	67, 493, 553
EarI	CTCTTC	3 cut(s)	67, 493, 553
EciI	GGCGGA	1 cut(s)	800
Eco130I	CCWWGG	7 cut(s)	157, 219, 334, 548, 1002, 1635, 1879
Eco32I	GATATC	1 cut(s)	1681
Eco47I	GGWCC	2 cut(s)	353, 1640
Eco57I	CTGAAG	1 cut(s)	2055
Eco88I	CYCGRG	2 cut(s)	356, 1735
EcoRI	GAATTC	1 cut(s)	1081
EcoRII	CCWGG	2 cut(s)	1591, 1789
EcoRV	GATATC	1 cut(s)	1681
EcoT14I	CCWWGG	7 cut(s)	157, 219, 334, 548, 1002, 1635, 1879
EcoT22I	ATGCAT	1 cut(s)	1414
ErhI	CCWWGG	7 cut(s)	157, 219, 334, 548, 1002, 1635, 1879
Esp3I	CGTCTC	1 cut(s)	2374
FalI	AAGNNNNNCTT	2 cut(s)	2219, 2251
FaqI	GGGAC	4 cut(s)	339, 373, 507, 1999
FblI	GTMKAC	3 cut(s)	96, 723, 1059
FspBI	CTAG	7 cut(s)	80, 266, 494, 672, 1160, 1322, 1880
GsaI	CCCAGC	1 cut(s)	1731
GsuI	CTGGAG	1 cut(s)	1812
HaeIII	GGCC	6 cut(s)	218, 981, 1336, 1752, 1867, 1944
HapII	CCGG	9 cut(s)	357, 383, 504, 576, 1123, 1643, 1736, 1890, 2247
HincII	GTYRAC	4 cut(s)	174, 865, 2266, 2305
HindII	GTYRAC	4 cut(s)	174, 865, 2266, 2305
HindIII	AAGCTT	2 cut(s)	394, 1023
HinfI	GANTC	8 cut(s)	83, 191, 434, 520, 956, 1056, 1177, 1260
HpaI	GTTAAC	2 cut(s)	865, 2266
HpaII	CCGG	9 cut(s)	357, 383, 504, 576, 1123, 1643, 1736, 1890, 2247
HphI	GGTGA	7 cut(s)	590, 778, 839, 985, 1099, 1392, 2227
Hpy99I	CGWCG	2 cut(s)	1331, 2087
HpyAV	CCTTC	7 cut(s)	150, 1099, 1198, 1250, 1739, 2079, 2383
HpyCH4III	ACNGT	7 cut(s)	101, 406, 804, 860, 1052, 1924, 2263
HpyCH4IV	ACGT	3 cut(s)	528, 591, 618
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1022, 1031, 1156, 1244, 1355, 1499, 1511
HpyF3I	CTNAG	5 cut(s)	306, 324, 1077, 1305, 1946
HpySE526I	ACGT	3 cut(s)	528, 591, 618
KpnI	GGTACC	1 cut(s)	1735
KspAI	GTTAAC	2 cut(s)	865, 2266
Kzo9I	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
LguI	GCTCTTC	2 cut(s)	493, 553
LmnI	GCTCC	2 cut(s)	1220, 1922
Lsp1109I	GCAGC	5 cut(s)	434, 683, 1000, 1003, 1367
LweI	GCATC	6 cut(s)	748, 879, 1000, 1399, 1507, 2199
MaeI	CTAG	7 cut(s)	80, 266, 494, 672, 1160, 1322, 1880
MaeII	ACGT	3 cut(s)	528, 591, 618
MaeIII	GTNAC	6 cut(s)	101, 746, 766, 953, 1125, 2027
MalI	GATC	9 cut(s)	138, 375, 546, 744, 888, 927, 1581, 1978, 1990
MboI	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
MflI	RGATCY	4 cut(s)	544, 925, 1579, 1988
MhlI	GDGCHC	3 cut(s)	647, 851, 1217
MlyI	GAGTC	6 cut(s)	77, 185, 443, 529, 950, 1065
MmeI	TCCRAC	1 cut(s)	177
Mph1103I	ATGCAT	1 cut(s)	1414
MseI	TTAA	8 cut(s)	18, 531, 639, 819, 864, 2226, 2265, 2394
MslI	CAYNNNNRTG	6 cut(s)	132, 756, 1344, 1515, 2025, 2348
MspI	CCGG	9 cut(s)	357, 383, 504, 576, 1123, 1643, 1736, 1890, 2247
MspR9I	CCNGG	9 cut(s)	357, 358, 384, 576, 1593, 1736, 1737, 1791, 1890
Mva1269I	GAATGC	3 cut(s)	425, 658, 2099
MvaI	CCWGG	2 cut(s)	1593, 1791
MwoI	GCNNNNNNNGC	7 cut(s)	1022, 1031, 1156, 1244, 1355, 1499, 1511
NciI	CCSGG	7 cut(s)	357, 358, 384, 576, 1736, 1737, 1890
NcoI	CCATGG	1 cut(s)	334
NdeII	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
NlaIV	GGNNCC	6 cut(s)	288, 355, 546, 1641, 1733, 1918
NmeAIII	GCCGAG	2 cut(s)	972, 1176
NmuCI	GTSAC	4 cut(s)	766, 953, 1125, 2027
NsiI	ATGCAT	1 cut(s)	1414
NspI	RCATGY	2 cut(s)	1467, 1514
OliI	CACNNNNGTG	1 cut(s)	2025
PaeI	GCATGC	1 cut(s)	1514
PaqCI	CACCTGC	1 cut(s)	2203
PciSI	GCTCTTC	2 cut(s)	493, 553
PcsI	WCGNNNNNNNCGW	2 cut(s)	534, 597
PctI	GAATGC	3 cut(s)	425, 658, 2099
PfeI	GAWTC	2 cut(s)	1177, 1260
PflMI	CCANNNNNTGG	1 cut(s)	2186
PfoI	TCCNGGA	1 cut(s)	1789
PinAI	ACCGGT	1 cut(s)	1122
Ple19I	CGATCG	1 cut(s)	745
PleI	GAGTC	6 cut(s)	77, 185, 442, 528, 950, 1064
PpsI	GAGTC	6 cut(s)	77, 185, 442, 528, 950, 1064
PsiI	TTATAA	1 cut(s)	855
Psp1406I	AACGTT	1 cut(s)	528
Psp6I	CCWGG	2 cut(s)	1591, 1789
PspFI	CCCAGC	1 cut(s)	1727
PspGI	CCWGG	2 cut(s)	1591, 1789
PspN4I	GGNNCC	6 cut(s)	288, 355, 546, 1641, 1733, 1918
PspPI	GGNCC	4 cut(s)	216, 353, 1334, 1640
PstI	CTGCAG	1 cut(s)	1984
PsuI	RGATCY	4 cut(s)	544, 925, 1579, 1988
PvuI	CGATCG	1 cut(s)	745
RsaI	GTAC	5 cut(s)	488, 1733, 1817, 1897, 2039
RsaNI	GTAC	5 cut(s)	487, 1732, 1816, 1896, 2038
RseI	CAYNNNNRTG	6 cut(s)	132, 756, 1344, 1515, 2025, 2348
SapI	GCTCTTC	2 cut(s)	493, 553
SaqAI	TTAA	8 cut(s)	18, 531, 639, 819, 864, 2226, 2265, 2394
Sau3AI	GATC	9 cut(s)	136, 373, 544, 742, 886, 925, 1579, 1976, 1988
Sau96I	GGNCC	4 cut(s)	216, 353, 1334, 1640
SchI	GAGTC	6 cut(s)	77, 185, 443, 529, 950, 1065
ScrFI	CCNGG	9 cut(s)	357, 358, 384, 576, 1593, 1736, 1737, 1791, 1890
SduI	GDGCHC	3 cut(s)	647, 851, 1217
SfaNI	GCATC	6 cut(s)	748, 879, 1000, 1399, 1507, 2199
SfcI	CTRYAG	2 cut(s)	1350, 1980
SinI	GGWCC	2 cut(s)	353, 1640
SmaI	CCCGGG	2 cut(s)	358, 1737
SmiMI	CAYNNNNRTG	6 cut(s)	132, 756, 1344, 1515, 2025, 2348
SmlI	CTYRAG	2 cut(s)	1130, 1626
SmoI	CTYRAG	2 cut(s)	1130, 1626
SphI	GCATGC	1 cut(s)	1514
SsiI	CCGC	8 cut(s)	111, 420, 711, 785, 1247, 1503, 1749, 2196
SspI	AATATT	2 cut(s)	13, 1719
SspMI	CTAG	7 cut(s)	80, 266, 494, 672, 1160, 1322, 1880
StyD4I	CCNGG	9 cut(s)	355, 356, 382, 574, 1591, 1734, 1735, 1789, 1888
StyI	CCWWGG	7 cut(s)	157, 219, 334, 548, 1002, 1635, 1879
TaaI	ACNGT	7 cut(s)	101, 406, 804, 860, 1052, 1924, 2263
TaiI	ACGT	3 cut(s)	531, 594, 621
TatI	WGTACW	2 cut(s)	486, 2037
TauI	GCSGC	5 cut(s)	713, 1250, 1505, 1752, 2198
TfiI	GAWTC	2 cut(s)	1177, 1260
Tru1I	TTAA	8 cut(s)	18, 531, 639, 819, 864, 2226, 2265, 2394
Tru9I	TTAA	8 cut(s)	18, 531, 639, 819, 864, 2226, 2265, 2394
TscAI	CASTG	3 cut(s)	409, 844, 2027
TseFI	GTSAC	4 cut(s)	766, 953, 1125, 2027
TseI	GCWGC	5 cut(s)	422, 696, 1013, 1016, 1355
Tsp45I	GTSAC	4 cut(s)	766, 953, 1125, 2027
TspDTI	ATGAA	7 cut(s)	920, 1299, 1407, 1511, 1871, 2064, 2118
TspGWI	ACGGA	2 cut(s)	581, 1440
TspMI	CCCGGG	2 cut(s)	356, 1735
TspRI	CASTG	3 cut(s)	409, 844, 2027
Van91I	CCANNNNNTGG	1 cut(s)	2186
VpaK11BI	GGWCC	2 cut(s)	353, 1640
XapI	RAATTY	3 cut(s)	1081, 1904, 2105
XbaI	TCTAGA	2 cut(s)	79, 671
XceI	RCATGY	2 cut(s)	1467, 1514
XmaI	CCCGGG	2 cut(s)	356, 1735
XmaJI	CCTAGG	1 cut(s)	1879
XmiI	GTMKAC	3 cut(s)	96, 723, 1059
XspI	CTAG	7 cut(s)	80, 266, 494, 672, 1160, 1322, 1880
Zsp2I	ATGCAT	1 cut(s)	1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.