MD10G1265600.v1.1

UDP-N-acetylglucosamine transferase subunit ALG14

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0006662
Physical Location & Seq
Forward (+)
35889197 .. 35899127
9931 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1265600.v1.1.491

Sequence Viewer

Length: 888 bp
ATGAAGCAGGCTCTTGTATATTACACTAAAATAAAATTGTCTATTTTTCTATTTTCCCTTAAAAAATGGAAGGTAGAAAAAAATAATCCTATATATTTTGACGGGAATAAACCGAAAATTCCCTTTGTTTCTTCATTTTCATCTGAGAGTCGCTTTCATTTTCCCATAAGTCCTCACCTTTGCCGGAAACAAAAGCCTTTCGATTCCCCAATCATGGGCTGTGCCGTTGCAATCACTCTTCTGATCGCCGCCGCAACGCTGATCGTCACTCGCCTGCTCTACGTATTGCACTTAACCGGCAAACCCCACAAACCCCCCAAACCCAGCAGCTCGAAAGGCTCAGCTCCCCAACCCCTCAGCACCCTAATCGTCTTGGGCTCTGGAGGCCACACGGCGGAGATGATCAACCTCTTGTCCGTCCTTCAAAGAGACAGATTTGCCCCTAGGTTCTACATCGCCGCCGCCACTGATAACATGAGCCTCCAGAAAGCTCGCCTACTGGAAGAGAACGCCGATGAGAGTTCGAGCTCGCAGTTCATGCAGATCTACCGTAGTAGGGAAGTGGGTCAGTCTTATTTCACCTCTGTTTTGACCACTTTGATTGCTTTGGCTCATGGGCTCTGGCTAATGATCAGAATCCGACCCCAAGTGATTCTGTGCAATGGGCCTGGGACTTGTGTTCCACTTTGTGTAATTGCATTCATATTCGAGGTTGTGGGGATTCGATGGTCGTCTGTGTTTTATGTTGAGAGTATAGCAAGAGTGCAGAGGCTCTCCCTGAGCGGCTTGCTTCTTTACAAGTTACGGATAGCGGATCAATTCTTTGTCCAGTGGCCTCAGCTACAGAAGAAATATCCCCGAGCTCACTATGTTGGTTGTCTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00510 ko00513 ko01100 map00510 map00513 map01100
Pfam Domains
Protein Families
Alg14

Protein Analysis

296

Amino Acids

33.29

Weight (kDa)

9.91

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg14 PF08660 122 - 294 7.6e-68 Oligosaccharide biosynthesis protein Alg14 like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 783
AciI CCGC 7 cut(s) 249, 252, 395, 459, 462, 783, 812
AclWI GGATC 1 cut(s) 822
AcsI RAATTY 1 cut(s) 117
AdeI CACNNNGTG 1 cut(s) 689
AfiI CCNNNNNNNGG 4 cut(s) 214, 215, 394, 556
AgsI TTSAA 1 cut(s) 425
AjnI CCWGG 1 cut(s) 667
AluBI AGCT 6 cut(s) 330, 344, 491, 528, 841, 863
AluI AGCT 6 cut(s) 330, 344, 491, 528, 841, 863
Alw21I GWGCWC 2 cut(s) 530, 865
Alw26I GTCTC 2 cut(s) 423, 884
AlwI GGATC 1 cut(s) 822
Ama87I CYCGRG 1 cut(s) 858
AoxI GGCC 3 cut(s) 385, 665, 833
ApeKI GCWGC 1 cut(s) 327
ApoI RAATTY 1 cut(s) 117
AspA2I CCTAGG 1 cut(s) 443
AspS9I GGNCC 1 cut(s) 665
AsuHPI GGTGA 2 cut(s) 167, 571
AvaI CYCGRG 1 cut(s) 858
AvrII CCTAGG 1 cut(s) 443
BanII GRGCYC 4 cut(s) 380, 530, 621, 865
Bbv12I GWGCWC 2 cut(s) 530, 865
BbvCI CCTCAGC 2 cut(s) 356, 837
BbvI GCAGC 1 cut(s) 339
BccI CCATC 1 cut(s) 720
BceAI ACGGC 2 cut(s) 209, 408
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BciT130I CCWGG 1 cut(s) 669
BclI TGATCA 2 cut(s) 402, 630
BcoDI GTCTC 2 cut(s) 423, 884
BfaI CTAG 1 cut(s) 444
BfmI CTRYAG 1 cut(s) 842
BglII AGATCT 1 cut(s) 543
BisI GCNGC 6 cut(s) 249, 252, 328, 459, 462, 784
BlnI CCTAGG 1 cut(s) 443
BlpI GCTNAGC 1 cut(s) 340
BlsI GCNGC 6 cut(s) 250, 253, 329, 460, 463, 785
Bme1390I CCNGG 1 cut(s) 669
BmeT110I CYCGRG 1 cut(s) 858
BmgT120I GGNCC 1 cut(s) 665
BmrFI CCNGG 1 cut(s) 669
BpmI CTGGAG 2 cut(s) 402, 467
Bpu10I CCTNAGC 3 cut(s) 356, 779, 837
Bpu1102I GCTNAGC 1 cut(s) 340
BsaAI YACGTR 1 cut(s) 283
BsaBI GATNNNNATC 1 cut(s) 635
BsaJI CCNNGG 2 cut(s) 443, 668
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 215, 394, 556
Bse118I RCCGGY 1 cut(s) 296
Bse1I ACTGG 2 cut(s) 504, 829
Bse3DI GCAATG 1 cut(s) 667
Bse8I GATNNNNATC 1 cut(s) 635
BseBI CCWGG 1 cut(s) 669
BseDI CCNNGG 2 cut(s) 443, 668
BseJI GATNNNNATC 1 cut(s) 635
BseLI CCNNNNNNNGG 4 cut(s) 214, 215, 394, 556
BseMI GCAATG 1 cut(s) 667
BseMII CTCAG 5 cut(s) 135, 354, 370, 770, 851
BseNI ACTGG 2 cut(s) 504, 829
BseXI GCAGC 1 cut(s) 339
BseYI CCCAGC 1 cut(s) 323
BsgI GTGCAG 1 cut(s) 785
BshFI GGCC 3 cut(s) 387, 667, 835
BsiHKAI GWGCWC 2 cut(s) 530, 865
BsiHKCI CYCGRG 1 cut(s) 858
BsiSI CCGG 2 cut(s) 184, 297
BslFI GGGAC 1 cut(s) 685
BslI CCNNNNNNNGG 4 cut(s) 214, 215, 394, 556
BsmAI GTCTC 2 cut(s) 423, 884
BsmFI GGGAC 1 cut(s) 685
BsmI GAATGC 1 cut(s) 698
BsnI GGCC 3 cut(s) 387, 667, 835
BsoBI CYCGRG 1 cut(s) 858
Bsp1286I GDGCHC 4 cut(s) 380, 530, 621, 865
Bsp143I GATC 6 cut(s) 243, 261, 402, 543, 630, 814
Bsp1720I GCTNAGC 1 cut(s) 340
BspACI CCGC 7 cut(s) 249, 252, 395, 459, 462, 783, 812
BspANI GGCC 3 cut(s) 387, 667, 835
BspCNI CTCAG 5 cut(s) 136, 353, 369, 771, 850
BspPI GGATC 1 cut(s) 822
BsrBI CCGCTC 1 cut(s) 783
BsrDI GCAATG 1 cut(s) 667
BsrFI RCCGGY 1 cut(s) 296
BsrI ACTGG 2 cut(s) 504, 829
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 2 cut(s) 443, 668
BssMI GATC 6 cut(s) 243, 261, 402, 543, 630, 814
BssT1I CCWWGG 1 cut(s) 443
Bst2UI CCWGG 1 cut(s) 669
Bst4CI ACNGT 1 cut(s) 551
Bst6I CTCTTC 2 cut(s) 243, 498
BstAPI GCANNNNNTGC 1 cut(s) 538
BstBAI YACGTR 1 cut(s) 283
BstC8I GCNNGC 5 cut(s) 9, 275, 493, 530, 788
BstDEI CTNAG 5 cut(s) 144, 340, 356, 779, 837
BstKTI GATC 6 cut(s) 246, 264, 405, 546, 633, 817
BstMAI GTCTC 2 cut(s) 423, 884
BstMBI GATC 6 cut(s) 243, 261, 402, 543, 630, 814
BstMWI GCNNNNNNNGC 3 cut(s) 336, 384, 538
BstNI CCWGG 1 cut(s) 669
BstSCI CCNGG 1 cut(s) 667
BstSFI CTRYAG 1 cut(s) 842
BstSNI TACGTA 1 cut(s) 283
BstV1I GCAGC 1 cut(s) 339
BstX2I RGATCY 1 cut(s) 543
BstYI RGATCY 1 cut(s) 543
BsuRI GGCC 3 cut(s) 387, 667, 835
BtgZI GCGATG 1 cut(s) 439
BtsIMutI CAGTG 2 cut(s) 465, 836
Cac8I GCNNGC 5 cut(s) 9, 275, 493, 530, 788
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 1 cut(s) 665
CspCI CAANNNNNGTGG 2 cut(s) 583, 618
CviAII CATG 5 cut(s) 214, 475, 538, 614, 883
DdeI CTNAG 5 cut(s) 144, 340, 356, 779, 837
DpnI GATC 6 cut(s) 245, 263, 404, 545, 632, 816
DpnII GATC 6 cut(s) 243, 261, 402, 543, 630, 814
DraIII CACNNNGTG 1 cut(s) 689
Eam1104I CTCTTC 2 cut(s) 243, 498
EarI CTCTTC 2 cut(s) 243, 498
EciI GGCGGA 1 cut(s) 410
Ecl136II GAGCTC 2 cut(s) 528, 863
Eco105I TACGTA 1 cut(s) 283
Eco130I CCWWGG 1 cut(s) 443
Eco24I GRGCYC 4 cut(s) 380, 530, 621, 865
Eco53kI GAGCTC 2 cut(s) 528, 863
Eco88I CYCGRG 1 cut(s) 858
EcoICRI GAGCTC 2 cut(s) 528, 863
EcoRII CCWGG 1 cut(s) 667
EcoT14I CCWWGG 1 cut(s) 443
EcoT38I GRGCYC 4 cut(s) 380, 530, 621, 865
ErhI CCWWGG 1 cut(s) 443
FaeI CATG 5 cut(s) 217, 478, 541, 617, 886
FaqI GGGAC 1 cut(s) 685
FatI CATG 5 cut(s) 213, 474, 537, 613, 882
FbaI TGATCA 2 cut(s) 402, 630
Fnu4HI GCNGC 6 cut(s) 249, 252, 328, 459, 462, 784
FriOI GRGCYC 4 cut(s) 380, 530, 621, 865
Fsp4HI GCNGC 6 cut(s) 249, 252, 328, 459, 462, 784
FspBI CTAG 1 cut(s) 444
GluI GCNGC 6 cut(s) 249, 252, 328, 459, 462, 784
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 2 cut(s) 402, 467
HaeIII GGCC 3 cut(s) 387, 667, 835
HapII CCGG 2 cut(s) 184, 297
Hin1II CATG 5 cut(s) 217, 478, 541, 617, 886
HinfI GANTC 5 cut(s) 148, 203, 636, 652, 721
HpaII CCGG 2 cut(s) 184, 297
HphI GGTGA 2 cut(s) 167, 571
Hpy188I TCNGA 4 cut(s) 145, 243, 635, 641
Hpy188III TCNNGA 2 cut(s) 381, 484
HpyAV CCTTC 2 cut(s) 64, 431
HpyCH4III ACNGT 1 cut(s) 551
HpyCH4IV ACGT 1 cut(s) 282
HpyCH4V TGCA 6 cut(s) 230, 289, 541, 660, 698, 766
HpyF10VI GCNNNNNNNGC 3 cut(s) 336, 384, 538
HpyF3I CTNAG 5 cut(s) 144, 340, 356, 779, 837
HpySE526I ACGT 1 cut(s) 282
Hsp92II CATG 5 cut(s) 217, 478, 541, 617, 886
Ksp22I TGATCA 2 cut(s) 402, 630
Kzo9I GATC 6 cut(s) 243, 261, 402, 543, 630, 814
LmnI GCTCC 1 cut(s) 349
Lsp1109I GCAGC 1 cut(s) 339
MaeI CTAG 1 cut(s) 444
MaeII ACGT 1 cut(s) 282
MaeIII GTNAC 2 cut(s) 265, 801
MalI GATC 6 cut(s) 245, 263, 404, 545, 632, 816
MbiI CCGCTC 1 cut(s) 783
MboI GATC 6 cut(s) 243, 261, 402, 543, 630, 814
MboII GAAGA 4 cut(s) 123, 230, 515, 859
MflI RGATCY 1 cut(s) 543
MhlI GDGCHC 4 cut(s) 380, 530, 621, 865
MluCI AATT 4 cut(s) 35, 117, 693, 818
MlyI GAGTC 1 cut(s) 157
MmeI TCCRAC 1 cut(s) 664
MnlI CCTC 9 cut(s) 183, 365, 377, 419, 491, 592, 703, 762, 846
MseI TTAA 2 cut(s) 60, 293
MspI CCGG 2 cut(s) 184, 297
MspR9I CCNGG 1 cut(s) 669
Mva1269I GAATGC 1 cut(s) 698
MvaI CCWGG 1 cut(s) 669
MwoI GCNNNNNNNGC 3 cut(s) 336, 384, 538
NdeII GATC 6 cut(s) 243, 261, 402, 543, 630, 814
NlaIII CATG 5 cut(s) 217, 478, 541, 617, 886
NmuCI GTSAC 1 cut(s) 265
PctI GAATGC 1 cut(s) 698
PfeI GAWTC 4 cut(s) 203, 636, 652, 721
PkrI GCNGC 6 cut(s) 250, 253, 329, 460, 463, 785
PleI GAGTC 1 cut(s) 156
PpsI GAGTC 1 cut(s) 156
Ppu21I YACGTR 1 cut(s) 283
Psp124BI GAGCTC 2 cut(s) 530, 865
Psp6I CCWGG 1 cut(s) 667
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 1 cut(s) 667
PspPI GGNCC 1 cut(s) 665
PsuI RGATCY 1 cut(s) 543
SacI GAGCTC 2 cut(s) 530, 865
SaqAI TTAA 2 cut(s) 60, 293
SatI GCNGC 6 cut(s) 249, 252, 328, 459, 462, 784
Sau3AI GATC 6 cut(s) 243, 261, 402, 543, 630, 814
Sau96I GGNCC 1 cut(s) 665
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 669
SduI GDGCHC 4 cut(s) 380, 530, 621, 865
SfcI CTRYAG 1 cut(s) 842
SnaBI TACGTA 1 cut(s) 283
Sse9I AATT 4 cut(s) 35, 117, 693, 818
SsiI CCGC 7 cut(s) 249, 252, 395, 459, 462, 783, 812
SspMI CTAG 1 cut(s) 444
SstI GAGCTC 2 cut(s) 530, 865
StyD4I CCNGG 1 cut(s) 667
StyI CCWWGG 1 cut(s) 443
TaaI ACNGT 1 cut(s) 551
TaiI ACGT 1 cut(s) 285
TaqI TCGA 5 cut(s) 201, 332, 524, 708, 724
TasI AATT 4 cut(s) 35, 117, 693, 818
TauI GCSGC 5 cut(s) 251, 254, 461, 464, 786
TfiI GAWTC 4 cut(s) 203, 636, 652, 721
Tru1I TTAA 2 cut(s) 60, 293
Tru9I TTAA 2 cut(s) 60, 293
TscAI CASTG 2 cut(s) 472, 836
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 1 cut(s) 327
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 6 cut(s) 17, 123, 129, 146, 526, 691
TspGWI ACGGA 2 cut(s) 406, 820
TspRI CASTG 2 cut(s) 472, 836
XapI RAATTY 1 cut(s) 117
XmaJI CCTAGG 1 cut(s) 443
XspI CTAG 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.