RLG00000031995

UDP-N-acetylglucosamine transferase subunit ALG14

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006662
Physical Location & Seq
Reverse (-)
10084683 .. 10085543
861 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031995

Sequence Viewer

Length: 672 bp
ATGGCCTGCAACGTCACAGTTACTGTGGTAATCATAAGTGTGATGTTGATCTTGATTCGTCTGCTCTATGTTTTATACCAATCCGGCAAACCCCTCAAAGCCAGAGGCTCTGCAGGCTTGGCACCACCACCTCTTAGTACACTCATTATATTAGGCTCAGGGGGTCACACTGCAGAGATGCTCAACCTGTTATCCGTGCTGCAAAAGGACAGATTTTCCCCCAGGTTCTACATTGCCGCTGCTACTGACAATATGAGTCTCCAGAAAGCTCGGTTGCTAGAAGAGACTGAGGACAAAATGGAGACTTCACGCTCACAGTTCATGCAGATCTATCGAAGTAGGGAAGTGGGGCAATCGTATATAACCTCTGTGTTGACTACTTTGATAGCTATGGTTCATGCAGTTTGGCTAATGCTAAGAATCAGACCTAAAGTGATTCTATGCAACGGGCCTGGGACTTGTGTTCCACTTTGTGTAATTGCATTCTTATTTAAGGTTGTGGGGGTTAGATGGTCATCTGTGTTTTATGTTGAGAGTATAGCAAGAGTACAGAGGCTTTCCTTAAGTGGCTTGCTTCTTTACAAGTTACGCATAGCGGATCAGTTCTTTGTCCAATGGCCACAGCTACAGAAGAAATATCCCCGAGCTCACTATGTTGGCCGTCTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00510 ko00513 ko01100 map00510 map00513 map01100
Pfam Domains
Protein Families
Alg14

Protein Analysis

224

Amino Acids

25.14

Weight (kDa)

10.06

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg14 PF08660 48 - 222 5.6e-69 Oligosaccharide biosynthesis protein Alg14 like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 121
AciI CCGC 2 cut(s) 237, 596
AclWI GGATC 1 cut(s) 606
AcoI YGGCCR 2 cut(s) 617, 658
AdeI CACNNNGTG 1 cut(s) 473
AfaI GTAC 2 cut(s) 139, 549
AflII CTTAAG 1 cut(s) 562
AjnI CCWGG 2 cut(s) 221, 451
AluBI AGCT 4 cut(s) 269, 389, 625, 647
AluI AGCT 4 cut(s) 269, 389, 625, 647
Alw21I GWGCWC 1 cut(s) 649
Alw26I GTCTC 4 cut(s) 263, 278, 296, 668
AlwI GGATC 1 cut(s) 606
AlwNI CAGNNNCTG 1 cut(s) 23
Ama87I CYCGRG 1 cut(s) 642
AoxI GGCC 4 cut(s) 3, 449, 617, 658
ApeKI GCWGC 2 cut(s) 199, 239
AspS9I GGNCC 1 cut(s) 449
AvaI CYCGRG 1 cut(s) 642
BalI TGGCCA 1 cut(s) 619
BanI GGYRCC 1 cut(s) 121
BanII GRGCYC 1 cut(s) 649
Bbv12I GWGCWC 1 cut(s) 649
BbvI GCAGC 2 cut(s) 186, 226
BccI CCATC 1 cut(s) 504
BceAI ACGGC 1 cut(s) 645
BcgI CGANNNNNNTGC 2 cut(s) 314, 348
BciT130I CCWGG 2 cut(s) 223, 453
BcoDI GTCTC 4 cut(s) 263, 278, 296, 668
BfaI CTAG 1 cut(s) 278
BfmI CTRYAG 3 cut(s) 111, 171, 626
BfrI CTTAAG 1 cut(s) 562
BglII AGATCT 1 cut(s) 327
BisI GCNGC 3 cut(s) 200, 237, 240
BlsI GCNGC 3 cut(s) 201, 238, 241
Bme1390I CCNGG 2 cut(s) 223, 453
BmeT110I CYCGRG 1 cut(s) 642
BmgT120I GGNCC 1 cut(s) 449
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 2 cut(s) 223, 453
BmsI GCATC 1 cut(s) 168
BpmI CTGGAG 1 cut(s) 245
Bpu10I CCTNAGC 1 cut(s) 157
BsaBI GATNNNNATC 2 cut(s) 47, 514
BsaJI CCNNGG 2 cut(s) 221, 452
Bse3DI GCAATG 1 cut(s) 231
Bse8I GATNNNNATC 2 cut(s) 47, 514
BseBI CCWGG 2 cut(s) 223, 453
BseDI CCNNGG 2 cut(s) 221, 452
BseJI GATNNNNATC 2 cut(s) 47, 514
BseMI GCAATG 1 cut(s) 231
BseMII CTCAG 2 cut(s) 171, 279
BseXI GCAGC 2 cut(s) 186, 226
BshFI GGCC 4 cut(s) 5, 451, 619, 660
BshNI GGYRCC 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 649
BsiHKCI CYCGRG 1 cut(s) 642
BsiSI CCGG 1 cut(s) 84
BslFI GGGAC 1 cut(s) 469
BsmAI GTCTC 4 cut(s) 263, 278, 296, 668
BsmBI CGTCTC 1 cut(s) 668
BsmFI GGGAC 1 cut(s) 469
BsmI GAATGC 1 cut(s) 482
BsnI GGCC 4 cut(s) 5, 451, 619, 660
BsoBI CYCGRG 1 cut(s) 642
Bsp1286I GDGCHC 1 cut(s) 649
Bsp143I GATC 3 cut(s) 48, 327, 598
BspACI CCGC 2 cut(s) 237, 596
BspANI GGCC 4 cut(s) 5, 451, 619, 660
BspCNI CTCAG 2 cut(s) 170, 280
BspLI GGNNCC 1 cut(s) 123
BspMAI CTGCAG 2 cut(s) 115, 175
BspPI GGATC 1 cut(s) 606
BspT107I GGYRCC 1 cut(s) 121
BspTI CTTAAG 1 cut(s) 562
BsrDI GCAATG 1 cut(s) 231
BssECI CCNNGG 2 cut(s) 221, 452
BssMI GATC 3 cut(s) 48, 327, 598
Bst2UI CCWGG 2 cut(s) 223, 453
Bst4CI ACNGT 3 cut(s) 19, 25, 318
Bst6I CTCTTC 1 cut(s) 276
BstAFI CTTAAG 1 cut(s) 562
BstC8I GCNNGC 3 cut(s) 7, 115, 572
BstDEI CTNAG 4 cut(s) 134, 157, 288, 416
BstKTI GATC 3 cut(s) 51, 330, 601
BstMAI GTCTC 4 cut(s) 263, 278, 296, 668
BstMBI GATC 3 cut(s) 48, 327, 598
BstMWI GCNNNNNNNGC 2 cut(s) 114, 119
BstNI CCWGG 2 cut(s) 223, 453
BstSCI CCNGG 2 cut(s) 221, 451
BstSFI CTRYAG 3 cut(s) 111, 171, 626
BstV1I GCAGC 2 cut(s) 186, 226
BstX2I RGATCY 1 cut(s) 327
BstYI RGATCY 1 cut(s) 327
BsuRI GGCC 4 cut(s) 5, 451, 619, 660
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 1 cut(s) 168
Cac8I GCNNGC 3 cut(s) 7, 115, 572
CaiI CAGNNNCTG 1 cut(s) 23
Cfr13I GGNCC 1 cut(s) 449
Csp6I GTAC 2 cut(s) 138, 548
CviAII CATG 3 cut(s) 322, 398, 667
CviQI GTAC 2 cut(s) 138, 548
DdeI CTNAG 4 cut(s) 134, 157, 288, 416
DpnI GATC 3 cut(s) 50, 329, 600
DpnII GATC 3 cut(s) 48, 327, 598
DraIII CACNNNGTG 1 cut(s) 473
EaeI YGGCCR 2 cut(s) 617, 658
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
Ecl136II GAGCTC 1 cut(s) 647
Eco24I GRGCYC 1 cut(s) 649
Eco53kI GAGCTC 1 cut(s) 647
Eco88I CYCGRG 1 cut(s) 642
EcoICRI GAGCTC 1 cut(s) 647
EcoRII CCWGG 2 cut(s) 221, 451
EcoT38I GRGCYC 1 cut(s) 649
Esp3I CGTCTC 1 cut(s) 668
FaeI CATG 3 cut(s) 325, 401, 670
FaqI GGGAC 1 cut(s) 469
FatI CATG 3 cut(s) 321, 397, 666
Fnu4HI GCNGC 3 cut(s) 200, 237, 240
FriOI GRGCYC 1 cut(s) 649
Fsp4HI GCNGC 3 cut(s) 200, 237, 240
FspBI CTAG 1 cut(s) 278
GluI GCNGC 3 cut(s) 200, 237, 240
GsuI CTGGAG 1 cut(s) 245
HaeIII GGCC 4 cut(s) 5, 451, 619, 660
HapII CCGG 1 cut(s) 84
Hin1II CATG 3 cut(s) 325, 401, 670
HincII GTYRAC 1 cut(s) 375
HindII GTYRAC 1 cut(s) 375
HinfI GANTC 4 cut(s) 55, 256, 420, 436
HpaII CCGG 1 cut(s) 84
Hpy166II GTNNAC 2 cut(s) 140, 375
Hpy188I TCNGA 1 cut(s) 425
Hpy188III TCNNGA 2 cut(s) 52, 262
Hpy8I GTNNAC 2 cut(s) 140, 375
HpyCH4III ACNGT 3 cut(s) 19, 25, 318
HpyCH4IV ACGT 1 cut(s) 12
HpyCH4V TGCA 8 cut(s) 9, 113, 173, 202, 325, 401, 444, 482
HpyF10VI GCNNNNNNNGC 2 cut(s) 114, 119
HpyF3I CTNAG 4 cut(s) 134, 157, 288, 416
HpySE526I ACGT 1 cut(s) 12
Hsp92II CATG 3 cut(s) 325, 401, 670
Kzo9I GATC 3 cut(s) 48, 327, 598
Lsp1109I GCAGC 2 cut(s) 186, 226
LweI GCATC 1 cut(s) 168
MaeI CTAG 1 cut(s) 278
MaeII ACGT 1 cut(s) 12
MaeIII GTNAC 4 cut(s) 13, 19, 164, 585
MalI GATC 3 cut(s) 50, 329, 600
MboI GATC 3 cut(s) 48, 327, 598
MboII GAAGA 2 cut(s) 293, 643
MflI RGATCY 1 cut(s) 327
MhlI GDGCHC 1 cut(s) 649
MlsI TGGCCA 1 cut(s) 619
MluCI AATT 1 cut(s) 477
MluNI TGGCCA 1 cut(s) 619
MlyI GAGTC 1 cut(s) 265
MnlI CCTC 6 cut(s) 98, 104, 141, 283, 376, 546
Mox20I TGGCCA 1 cut(s) 619
MscI TGGCCA 1 cut(s) 619
MseI TTAA 2 cut(s) 492, 563
MslI CAYNNNNRTG 1 cut(s) 38
Msp20I TGGCCA 1 cut(s) 619
MspA1I CMGCKG 1 cut(s) 239
MspCI CTTAAG 1 cut(s) 562
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 2 cut(s) 223, 453
Mva1269I GAATGC 1 cut(s) 482
MvaI CCWGG 2 cut(s) 223, 453
MwoI GCNNNNNNNGC 2 cut(s) 114, 119
NdeII GATC 3 cut(s) 48, 327, 598
NlaIII CATG 3 cut(s) 325, 401, 670
NlaIV GGNNCC 1 cut(s) 123
NmuCI GTSAC 2 cut(s) 13, 164
PctI GAATGC 1 cut(s) 482
PfeI GAWTC 3 cut(s) 55, 420, 436
PkrI GCNGC 3 cut(s) 201, 238, 241
PleI GAGTC 1 cut(s) 264
PpsI GAGTC 1 cut(s) 264
Psp124BI GAGCTC 1 cut(s) 649
Psp6I CCWGG 2 cut(s) 221, 451
PspGI CCWGG 2 cut(s) 221, 451
PspN4I GGNNCC 1 cut(s) 123
PspPI GGNCC 1 cut(s) 449
PstI CTGCAG 2 cut(s) 115, 175
PstNI CAGNNNCTG 1 cut(s) 23
PsuI RGATCY 1 cut(s) 327
RsaI GTAC 2 cut(s) 139, 549
RsaNI GTAC 2 cut(s) 138, 548
RseI CAYNNNNRTG 1 cut(s) 38
SacI GAGCTC 1 cut(s) 649
SaqAI TTAA 2 cut(s) 492, 563
SatI GCNGC 3 cut(s) 200, 237, 240
Sau3AI GATC 3 cut(s) 48, 327, 598
Sau96I GGNCC 1 cut(s) 449
SchI GAGTC 1 cut(s) 265
ScrFI CCNGG 2 cut(s) 223, 453
SduI GDGCHC 1 cut(s) 649
SfaNI GCATC 1 cut(s) 168
SfcI CTRYAG 3 cut(s) 111, 171, 626
SmiMI CAYNNNNRTG 1 cut(s) 38
SmlI CTYRAG 1 cut(s) 562
SmoI CTYRAG 1 cut(s) 562
Sse9I AATT 1 cut(s) 477
SsiI CCGC 2 cut(s) 237, 596
SspMI CTAG 1 cut(s) 278
SstI GAGCTC 1 cut(s) 649
StyD4I CCNGG 2 cut(s) 221, 451
TaaI ACNGT 3 cut(s) 19, 25, 318
TaiI ACGT 1 cut(s) 15
TaqI TCGA 1 cut(s) 334
TasI AATT 1 cut(s) 477
TatI WGTACW 2 cut(s) 137, 547
TauI GCSGC 1 cut(s) 239
TfiI GAWTC 3 cut(s) 55, 420, 436
Tru1I TTAA 2 cut(s) 492, 563
Tru9I TTAA 2 cut(s) 492, 563
TscAI CASTG 1 cut(s) 175
TseFI GTSAC 2 cut(s) 13, 164
TseI GCWGC 2 cut(s) 199, 239
Tsp45I GTSAC 2 cut(s) 13, 164
TspDTI ATGAA 2 cut(s) 310, 386
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 1 cut(s) 175
Vha464I CTTAAG 1 cut(s) 562
XspI CTAG 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.