Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0011548

Physical Location & Seq

Genomic Coordinates Reverse (-)

6416069 .. 6423067

Gene Structure 6999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1075400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGCTGCCTCATGGGAGGAAAGCGTCGAATACTCCATCAACACCATCTACCTCCTCTTCTCCGCCTACCTCGTCTTCGTCATGCAGCTTGGCTTCGCCATGCTCTGCGCCGGCTCCGTTCAAGCCAAGAACGCCATGAACATAATGCTTACCAACGTCGTCGACGCCGTGGTAGGTAGCCTCTCCTACTACCTCTTCGGATTTGCCTTTGCATTCGGAGAAGGCTCAAATGCCAACCCTTTTATTGGTACAAGTTTCTTTGCTCTCAATGACATTCCCAACTCCACCTACGACTATGACTACAGCTTCTTCCTTTTCCAATGGGCTTTTGCCATAGCTGTTGCGGGTATAACCAGTGGGTCAATTGCTGAGCGTACCCAATTTAGTGCGTACCTCATTTTCTCTTGCTTTCTTTCCGGGTTTGTGTACCCCGTGGTGGTTCATTGGGTGTGGTCGTCCACTGGGTGGCTTAGTCCAAATTCGAGTAACTTGTTGTTAGGCTCTGGAGCCATTGACTTTGCCGGAAGTGGCTGTTGGATTATTGGCGTGGTCCATTTGGTTGGTGGGGTTGCCGGGCTTTGGGGCTCTTTCATCGAAGGCCCCAGAGTGGGCCGGTTTGATGCGTTTGGGAAGGCCATACCCATTAGAGGCCATAACGCGGCGCTCGTGGTGCTTGGGACGTTCTTGTTGTGGTTCGGTTGGTTTGGTTTCAATCCGGGCTCGTTTGATAAGATTCTTGTGGCGTATCCGGGCACAAGTGATCAAGGGAATTGGACTGGCGTGGGCCGAACAGCGGTTGCAACTACGTTAGCTGGATCGACTGCGGGAATCGTTACCCTATTCGGCCGGCGCTTGCTAGTGGGTCATTGGGATGCACTAGATGTTTGCAACGGAGTGCTTGGTGGGTTTGTAGCGATAACGTCGGGATGTGCCGTGGTTGAACCGTGGGCTGCCGTTGTTTGTGGTTTCTTCGCAGCTTGGGTTCTAATGGGGTTCAACATCTTGGCCATAAAACTACAATTTGATGACCCGTTAGAGGCGACCCAATTGCACGGTGGGTGTGGTGCGTGGGGTTTGATATTTACAGGGCTGTTCGCGAAAGAGGAGTTCGTTGTCCAAGCCTATAATGCAGGCGCCGTCGGTACAGTACGGCCTTACGGTCTCTTTATGGGCGGCGGATGGGGGCTGCTCGGAGCCCAAGTGGCTGAGCTTTTGGCCATTGTGGGCTGGGTCAGCTTGACAATGGGTCCTCTCTTCTACACCCTTCACAAGCTCAGGATTTTGAGGATCTCTGTGGATGACGAAATTGCAGGTCTTGATGTTTCCAGTCATGGAGGCCATGCCTATGTTCATGCAGAAGAACACCAACGTCGCTTTTACGCAGATTACGTACGCATTCAAGGCAATAGATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008519 GO:0015075 GO:0015695 GO:0015696 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0098655

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ammonium_transp

Protein Analysis

472

Amino Acids

50.6

Weight (kDa)

5.4

Isoelectric Point (pI)

23.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ammonium_transp	PF00909	18 - 449	1.6e-119	Ammonium Transporter Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011548)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g38461
malus_domestica	MD11G1075400.v1.1
prunus_persica	Prupe.6G058300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0069161 RchiOBHm_Chr5g0073441
rosa_laevigata	RLG00000036041
rosa_multiflora	Rmu_sc0000936.1_g000015 Rmu_sc0001997.1_g000014
rosa_rugosa	Rorug05G0396500
rosa_samantha	Rh5AG453300 Rh5AG480500 Rh5BG472500 Rh5BG501300 Rh5CG494900 Rh5CG524400 Rh5DG513600
rosa_wichuraiana	Rw0G006030 Rw5G042330 Rw5G044640 Rw5G044670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1301
AccB1I	GGYRCC	1 cut(s)	1133
AccB7I	CCANNNNNTGG	1 cut(s)	465
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	2 cut(s)	659, 1097
AciI	CCGC	7 cut(s)	63, 344, 659, 794, 824, 1173, 1176
AclWI	GGATC	2 cut(s)	823, 1295
AcoI	YGGCCR	3 cut(s)	844, 1005, 1215
AcsI	RAATTY	1 cut(s)	478
AcyI	GRCGYC	2 cut(s)	165, 1134
AdeI	CACNNNGTG	1 cut(s)	465
AfaI	GTAC	7 cut(s)	250, 376, 392, 428, 1144, 1149, 1392
AgsI	TTSAA	5 cut(s)	122, 712, 941, 997, 1400
AhdI	GACNNNNNGTC	1 cut(s)	1245
AjuI	GAANNNNNNNTTGG	2 cut(s)	517, 549
AluBI	AGCT	8 cut(s)	88, 306, 338, 812, 977, 1210, 1236, 1273
AluI	AGCT	8 cut(s)	88, 306, 338, 812, 977, 1210, 1236, 1273
Alw26I	GTCTC	1 cut(s)	1166
AlwI	GGATC	2 cut(s)	823, 1295
ApeKI	GCWGC	5 cut(s)	5, 85, 950, 974, 1186
ApoI	RAATTY	1 cut(s)	478
AspLEI	GCGC	4 cut(s)	110, 664, 852, 1136
AspS9I	GGNCC	5 cut(s)	550, 599, 610, 784, 1247
AsuC2I	CCSGG	4 cut(s)	418, 574, 717, 750
AvaII	GGWCC	2 cut(s)	550, 1247
BaeGI	GKGCMC	1 cut(s)	755
BalI	TGGCCA	2 cut(s)	1007, 1217
BanI	GGYRCC	1 cut(s)	1133
BanII	GRGCYC	3 cut(s)	587, 722, 1198
BauI	CACGAG	1 cut(s)	665
BbsI	GAAGAC	1 cut(s)	67
BbvI	GCAGC	4 cut(s)	97, 937, 986, 1173
BccI	CCATC	3 cut(s)	44, 53, 1173
BceAI	ACGGC	5 cut(s)	152, 917, 938, 1121, 1166
BcgI	CGANNNNNNTGC	2 cut(s)	1030, 1064
BciVI	GTATCC	1 cut(s)	756
BclI	TGATCA	1 cut(s)	760
BcnI	CCSGG	4 cut(s)	418, 574, 717, 750
BcoDI	GTCTC	1 cut(s)	1166
BfaI	CTAG	2 cut(s)	857, 878
BfmI	CTRYAG	1 cut(s)	301
BfoI	RGCGCY	3 cut(s)	665, 853, 1137
BfuAI	ACCTGC	1 cut(s)	1301
BfuI	GTATCC	1 cut(s)	756
BglI	GCCNNNNNGGC	1 cut(s)	1202
BisI	GCNGC	7 cut(s)	6, 86, 660, 951, 975, 1174, 1187
BlpI	GCTNAGC	2 cut(s)	369, 1206
BlsI	GCNGC	7 cut(s)	7, 87, 661, 952, 976, 1175, 1188
Bme1390I	CCNGG	4 cut(s)	418, 574, 717, 750
Bme18I	GGWCC	2 cut(s)	550, 1247
BmeRI	GACNNNNNGTC	1 cut(s)	1245
BmgT120I	GGNCC	5 cut(s)	550, 599, 610, 784, 1247
BmiI	GGNNCC	6 cut(s)	115, 508, 601, 1135, 1195, 1248
BmrFI	CCNGG	4 cut(s)	418, 574, 717, 750
BmrI	ACTGGG	1 cut(s)	471
BmsI	GCATC	2 cut(s)	610, 862
BmuI	ACTGGG	1 cut(s)	471
BpiI	GAAGAC	1 cut(s)	67
BpmI	CTGGAG	1 cut(s)	525
Bpu10I	CCTNAGC	1 cut(s)	1274
Bpu1102I	GCTNAGC	2 cut(s)	369, 1206
BpuMI	CCSGG	4 cut(s)	418, 574, 717, 750
BsaAI	YACGTR	1 cut(s)	1390
BsaHI	GRCGYC	2 cut(s)	165, 1134
BsaI	GGTCTC	1 cut(s)	1166
BsaJI	CCNNGG	4 cut(s)	168, 432, 933, 944
BsaXI	ACNNNNNCTCC	2 cut(s)	1185, 1215
Bse118I	RCCGGY	3 cut(s)	110, 612, 846
Bse1I	ACTGG	4 cut(s)	354, 466, 781, 1326
BseDI	CCNNGG	4 cut(s)	168, 432, 933, 944
BseGI	GGATG	4 cut(s)	877, 932, 1184, 1303
BseMII	CTCAG	3 cut(s)	360, 1197, 1288
BseNI	ACTGG	4 cut(s)	354, 466, 781, 1326
BseRI	GAGGAG	2 cut(s)	44, 1118
BseSI	GKGCMC	1 cut(s)	755
BseX3I	CGGCCG	1 cut(s)	844
BseXI	GCAGC	4 cut(s)	97, 937, 986, 1173
BseYI	CCCAGC	1 cut(s)	1227
Bsh1236I	CGCG	2 cut(s)	659, 1097
Bsh1285I	CGRYCG	1 cut(s)	847
BshNI	GGYRCC	1 cut(s)	1133
BsiEI	CGRYCG	1 cut(s)	847
BsiSI	CCGG	8 cut(s)	111, 417, 522, 573, 613, 716, 749, 847
BsiWI	CGTACG	1 cut(s)	1390
BslFI	GGGAC	1 cut(s)	691
BsmAI	GTCTC	1 cut(s)	1166
BsmFI	GGGAC	1 cut(s)	691
BsmI	GAATGC	2 cut(s)	212, 1395
Bso31I	GGTCTC	1 cut(s)	1166
Bsp1286I	GDGCHC	4 cut(s)	587, 722, 755, 1198
Bsp143I	GATC	4 cut(s)	760, 815, 1287, 1409
Bsp1720I	GCTNAGC	2 cut(s)	369, 1206
Bsp68I	TCGCGA	1 cut(s)	1097
BspACI	CCGC	7 cut(s)	63, 344, 659, 794, 824, 1173, 1176
BspCNI	CTCAG	3 cut(s)	361, 1198, 1287
BspFNI	CGCG	2 cut(s)	659, 1097
BspLI	GGNNCC	6 cut(s)	115, 508, 601, 1135, 1195, 1248
BspMI	ACCTGC	1 cut(s)	1301
BspPI	GGATC	2 cut(s)	823, 1295
BspT107I	GGYRCC	1 cut(s)	1133
BspTNI	GGTCTC	1 cut(s)	1166
BsrFI	RCCGGY	3 cut(s)	110, 612, 846
BsrI	ACTGG	4 cut(s)	354, 466, 781, 1326
BssAI	RCCGGY	3 cut(s)	110, 612, 846
BssECI	CCNNGG	4 cut(s)	168, 432, 933, 944
BssMI	GATC	4 cut(s)	760, 815, 1287, 1409
BssNI	GRCGYC	2 cut(s)	165, 1134
BssSI	CACGAG	1 cut(s)	665
Bst2BI	CACGAG	1 cut(s)	665
Bst4CI	ACNGT	4 cut(s)	945, 1055, 1147, 1160
Bst6I	CTCTTC	3 cut(s)	62, 200, 1259
BstACI	GRCGYC	2 cut(s)	165, 1134
BstBAI	YACGTR	1 cut(s)	1390
BstC8I	GCNNGC	4 cut(s)	112, 848, 854, 1132
BstDEI	CTNAG	4 cut(s)	369, 470, 1206, 1274
BstDSI	CCRYGG	4 cut(s)	168, 432, 933, 944
BstF5I	GGATG	4 cut(s)	877, 932, 1184, 1303
BstFNI	CGCG	2 cut(s)	659, 1097
BstH2I	RGCGCY	3 cut(s)	665, 853, 1137
BstHHI	GCGC	4 cut(s)	110, 664, 852, 1136
BstKTI	GATC	4 cut(s)	763, 818, 1290, 1412
BstMAI	GTCTC	1 cut(s)	1166
BstMBI	GATC	4 cut(s)	760, 815, 1287, 1409
BstMCI	CGRYCG	1 cut(s)	847
BstMWI	GCNNNNNNNGC	6 cut(s)	131, 670, 1127, 1202, 1233, 1401
BstSCI	CCNGG	4 cut(s)	416, 572, 715, 748
BstSFI	CTRYAG	1 cut(s)	301
BstSLI	GKGCMC	1 cut(s)	755
BstSNI	TACGTA	1 cut(s)	1390
BstUI	CGCG	2 cut(s)	659, 1097
BstV1I	GCAGC	4 cut(s)	97, 937, 986, 1173
BstV2I	GAAGAC	1 cut(s)	67
BstX2I	RGATCY	1 cut(s)	1287
BstXI	CCANNNNNNTGG	1 cut(s)	560
BstYI	RGATCY	1 cut(s)	1287
BstZI	CGGCCG	1 cut(s)	844
BsuI	GTATCC	1 cut(s)	756
BtgI	CCRYGG	4 cut(s)	168, 432, 933, 944
BtsCI	GGATG	4 cut(s)	877, 932, 1184, 1303
BtsIMutI	CAGTG	2 cut(s)	361, 459
BtuMI	TCGCGA	1 cut(s)	1097
BveI	ACCTGC	1 cut(s)	1301
Cac8I	GCNNGC	4 cut(s)	112, 848, 854, 1132
CfoI	GCGC	4 cut(s)	110, 664, 852, 1136
Cfr10I	RCCGGY	3 cut(s)	110, 612, 846
Cfr13I	GGNCC	5 cut(s)	550, 599, 610, 784, 1247
CseI	GACGC	2 cut(s)	13, 173
Csp6I	GTAC	7 cut(s)	249, 375, 391, 427, 1143, 1148, 1391
CviAII	CATG	7 cut(s)	12, 82, 100, 136, 1331, 1340, 1352
CviQI	GTAC	7 cut(s)	249, 375, 391, 427, 1143, 1148, 1391
DdeI	CTNAG	4 cut(s)	369, 470, 1206, 1274
DinI	GGCGCC	1 cut(s)	1135
DpnI	GATC	4 cut(s)	762, 817, 1289, 1411
DpnII	GATC	4 cut(s)	760, 815, 1287, 1409
DraIII	CACNNNGTG	1 cut(s)	465
DriI	GACNNNNNGTC	1 cut(s)	1245
EaeI	YGGCCR	3 cut(s)	844, 1005, 1215
EagI	CGGCCG	1 cut(s)	844
Eam1104I	CTCTTC	3 cut(s)	62, 200, 1259
Eam1105I	GACNNNNNGTC	1 cut(s)	1245
EarI	CTCTTC	3 cut(s)	62, 200, 1259
EciI	GGCGGA	2 cut(s)	52, 1191
EclXI	CGGCCG	1 cut(s)	844
Eco105I	TACGTA	1 cut(s)	1390
Eco24I	GRGCYC	3 cut(s)	587, 722, 1198
Eco31I	GGTCTC	1 cut(s)	1166
Eco47I	GGWCC	2 cut(s)	550, 1247
Eco52I	CGGCCG	1 cut(s)	844
EcoO109I	RGGNCCY	2 cut(s)	599, 1247
EcoT38I	GRGCYC	3 cut(s)	587, 722, 1198
EgeI	GGCGCC	1 cut(s)	1135
EheI	GGCGCC	1 cut(s)	1135
FaeI	CATG	7 cut(s)	15, 85, 103, 139, 1334, 1343, 1355
FaqI	GGGAC	1 cut(s)	691
FatI	CATG	7 cut(s)	11, 81, 99, 135, 1330, 1339, 1351
FauI	CCCGC	2 cut(s)	337, 817
FbaI	TGATCA	1 cut(s)	760
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	7 cut(s)	6, 86, 660, 951, 975, 1174, 1187
FokI	GGATG	4 cut(s)	884, 939, 1191, 1310
FriOI	GRGCYC	3 cut(s)	587, 722, 1198
Fsp4HI	GCNGC	7 cut(s)	6, 86, 660, 951, 975, 1174, 1187
FspBI	CTAG	2 cut(s)	857, 878
GlaI	GCGC	4 cut(s)	109, 663, 851, 1135
GluI	GCNGC	7 cut(s)	6, 86, 660, 951, 975, 1174, 1187
GsaI	CCCAGC	1 cut(s)	1231
GsuI	CTGGAG	1 cut(s)	525
HaeII	RGCGCY	3 cut(s)	665, 853, 1137
HapII	CCGG	8 cut(s)	111, 417, 522, 573, 613, 716, 749, 847
HgaI	GACGC	2 cut(s)	13, 173
HhaI	GCGC	4 cut(s)	110, 664, 852, 1136
Hin1I	GRCGYC	2 cut(s)	165, 1134
Hin1II	CATG	7 cut(s)	15, 85, 103, 139, 1334, 1343, 1355
Hin6I	GCGC	4 cut(s)	108, 662, 850, 1134
HinP1I	GCGC	4 cut(s)	108, 662, 850, 1134
HincII	GTYRAC	1 cut(s)	163
HindII	GTYRAC	1 cut(s)	163
HinfI	GANTC	2 cut(s)	733, 828
HpaII	CCGG	8 cut(s)	111, 417, 522, 573, 613, 716, 749, 847
Hpy166II	GTNNAC	3 cut(s)	163, 427, 459
Hpy188I	TCNGA	3 cut(s)	200, 218, 1193
Hpy188III	TCNNGA	6 cut(s)	504, 924, 1096, 1276, 1316, 1413
Hpy8I	GTNNAC	3 cut(s)	163, 427, 459
Hpy99I	CGWCG	7 cut(s)	29, 161, 164, 167, 925, 1142, 1374
HpyAV	CCTTC	4 cut(s)	215, 590, 625, 1274
HpyCH4III	ACNGT	4 cut(s)	945, 1055, 1147, 1160
HpyCH4IV	ACGT	6 cut(s)	156, 680, 806, 920, 1369, 1389
HpyCH4V	TGCA	9 cut(s)	85, 212, 800, 875, 888, 1051, 1130, 1310, 1355
HpyF10VI	GCNNNNNNNGC	6 cut(s)	131, 670, 1127, 1202, 1233, 1401
HpyF3I	CTNAG	4 cut(s)	369, 470, 1206, 1274
HpySE526I	ACGT	6 cut(s)	156, 680, 806, 920, 1369, 1389
Hsp92I	GRCGYC	2 cut(s)	165, 1134
Hsp92II	CATG	7 cut(s)	15, 85, 103, 139, 1334, 1343, 1355
HspAI	GCGC	4 cut(s)	108, 662, 850, 1134
KasI	GGCGCC	1 cut(s)	1133
KroI	GCCGGC	2 cut(s)	110, 846
KroNI	GCCGGC	2 cut(s)	112, 848
Ksp22I	TGATCA	1 cut(s)	760
Kzo9I	GATC	4 cut(s)	760, 815, 1287, 1409
LmnI	GCTCC	3 cut(s)	119, 506, 1193
Lsp1109I	GCAGC	4 cut(s)	97, 937, 986, 1173
LweI	GCATC	2 cut(s)	610, 862
MaeI	CTAG	2 cut(s)	857, 878
MaeII	ACGT	6 cut(s)	156, 680, 806, 920, 1369, 1389
MaeIII	GTNAC	2 cut(s)	485, 832
MalI	GATC	4 cut(s)	762, 817, 1289, 1411
MboI	GATC	4 cut(s)	760, 815, 1287, 1409
MboII	GAAGA	7 cut(s)	49, 67, 187, 301, 961, 1246, 1370
MfeI	CAATTG	2 cut(s)	363, 1046
MflI	RGATCY	1 cut(s)	1287
MhlI	GDGCHC	4 cut(s)	587, 722, 755, 1198
MlsI	TGGCCA	2 cut(s)	1007, 1217
MluCI	AATT	7 cut(s)	363, 380, 478, 769, 1019, 1046, 1305
MluNI	TGGCCA	2 cut(s)	1007, 1217
Mly113I	GGCGCC	1 cut(s)	1134
MmeI	TCCRAC	1 cut(s)	515
Mox20I	TGGCCA	2 cut(s)	1007, 1217
MroNI	GCCGGC	2 cut(s)	110, 846
MscI	TGGCCA	2 cut(s)	1007, 1217
MslI	CAYNNNNRTG	2 cut(s)	870, 1344
Msp20I	TGGCCA	2 cut(s)	1007, 1217
MspA1I	CMGCKG	1 cut(s)	794
MspI	CCGG	8 cut(s)	111, 417, 522, 573, 613, 716, 749, 847
MspR9I	CCNGG	4 cut(s)	418, 574, 717, 750
MunI	CAATTG	2 cut(s)	363, 1046
Mva1269I	GAATGC	2 cut(s)	212, 1395
MvnI	CGCG	2 cut(s)	659, 1097
MwoI	GCNNNNNNNGC	6 cut(s)	131, 670, 1127, 1202, 1233, 1401
NaeI	GCCGGC	2 cut(s)	112, 848
NarI	GGCGCC	1 cut(s)	1134
NciI	CCSGG	4 cut(s)	418, 574, 717, 750
NdeII	GATC	4 cut(s)	760, 815, 1287, 1409
NgoMIV	GCCGGC	2 cut(s)	110, 846
NlaIII	CATG	7 cut(s)	15, 85, 103, 139, 1334, 1343, 1355
NlaIV	GGNNCC	6 cut(s)	115, 508, 601, 1135, 1195, 1248
NruI	TCGCGA	1 cut(s)	1097
PcsI	WCGNNNNNNNCGW	3 cut(s)	165, 663, 1386
PctI	GAATGC	2 cut(s)	212, 1395
PdiI	GCCGGC	2 cut(s)	112, 848
PfeI	GAWTC	2 cut(s)	733, 828
Pfl23II	CGTACG	1 cut(s)	1390
PflMI	CCANNNNNTGG	1 cut(s)	465
PkrI	GCNGC	7 cut(s)	7, 87, 661, 952, 976, 1175, 1188
PluTI	GGCGCC	1 cut(s)	1137
Ppu21I	YACGTR	1 cut(s)	1390
PpuMI	RGGWCCY	1 cut(s)	1247
Psp5II	RGGWCCY	1 cut(s)	1247
PspFI	CCCAGC	1 cut(s)	1227
PspLI	CGTACG	1 cut(s)	1390
PspN4I	GGNNCC	6 cut(s)	115, 508, 601, 1135, 1195, 1248
PspPI	GGNCC	5 cut(s)	550, 599, 610, 784, 1247
PspPPI	RGGWCCY	1 cut(s)	1247
PsuI	RGATCY	1 cut(s)	1287
RruI	TCGCGA	1 cut(s)	1097
RsaI	GTAC	7 cut(s)	250, 376, 392, 428, 1144, 1149, 1392
RsaNI	GTAC	7 cut(s)	249, 375, 391, 427, 1143, 1148, 1391
RseI	CAYNNNNRTG	2 cut(s)	870, 1344
SalI	GTCGAC	1 cut(s)	161
SatI	GCNGC	7 cut(s)	6, 86, 660, 951, 975, 1174, 1187
Sau3AI	GATC	4 cut(s)	760, 815, 1287, 1409
Sau96I	GGNCC	5 cut(s)	550, 599, 610, 784, 1247
ScrFI	CCNGG	4 cut(s)	418, 574, 717, 750
SduI	GDGCHC	4 cut(s)	587, 722, 755, 1198
SfaNI	GCATC	2 cut(s)	610, 862
SfcI	CTRYAG	1 cut(s)	301
SfoI	GGCGCC	1 cut(s)	1135
SgrDI	CGTCGACG	1 cut(s)	161
SinI	GGWCC	2 cut(s)	550, 1247
SmiMI	CAYNNNNRTG	2 cut(s)	870, 1344
SnaBI	TACGTA	1 cut(s)	1390
Sse9I	AATT	7 cut(s)	363, 380, 478, 769, 1019, 1046, 1305
SsiI	CCGC	7 cut(s)	63, 344, 659, 794, 824, 1173, 1176
SspDI	GGCGCC	1 cut(s)	1133
SspMI	CTAG	2 cut(s)	857, 878
StyD4I	CCNGG	4 cut(s)	416, 572, 715, 748
TaaI	ACNGT	4 cut(s)	945, 1055, 1147, 1160
TaiI	ACGT	6 cut(s)	159, 683, 809, 923, 1372, 1392
TaqI	TCGA	5 cut(s)	27, 162, 482, 594, 818
TasI	AATT	7 cut(s)	363, 380, 478, 769, 1019, 1046, 1305
TauI	GCSGC	2 cut(s)	662, 1176
TfiI	GAWTC	2 cut(s)	733, 828
TscAI	CASTG	2 cut(s)	361, 466
TseI	GCWGC	5 cut(s)	5, 85, 950, 974, 1186
TspDTI	ATGAA	4 cut(s)	152, 431, 580, 1340
TspGWI	ACGGA	2 cut(s)	106, 906
TspRI	CASTG	2 cut(s)	361, 466
Van91I	CCANNNNNTGG	1 cut(s)	465
VpaK11BI	GGWCC	2 cut(s)	550, 1247
XapI	RAATTY	1 cut(s)	478
XcmI	CCANNNNNNNNNTGG	2 cut(s)	560, 1052
XmiI	GTMKAC	1 cut(s)	162
XspI	CTAG	2 cut(s)	857, 878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.