MD11G1135900.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
12464807 .. 12470082
5276 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1135900.v1.1.491

Sequence Viewer

Length: 1518 bp
ATGTTGGGTTTATTGACAATGCGCTTGTTCTGGTGGCAACAGCTGCCTCTGCTTATTCTCATCCATCTTTTGGAACCCAGCAGAACAAGCTACAAAGTTTACGCTGAAGCTCTACTAACTTTCAAGAGCGATGGTGGAAGCCCTCAACTACTCAACGGTCGAATTGGAAGATGTCCTTGTCTAACACAATGGAAAATTGTCTACTGTCATAAACTGAAGGACCCGTGTGTTGTTTCTTTACTTTTCGTTACACACTCTTCAATTCAACTACAAAAAGAGCACCATAAACCAAGAAGCAGGAGGATAGCAGCCATAGTTGATGGGGATAATGGAACTCCAACACTCACACCTGTGGAAAAAGTTCGTGGTAACCATTCAACAAAACCAAAAGTTGCAGCAATTATTGGTGGAGTTGTTGCCACTCTGCTTGTGATTATCGTAGTGATGCTCGTTTACATCTGCTTGATGCGTGTAAAAAGATTAACTAGGCAAACATCTGAGACAGTGTCATCTGCACCATCACCCCCTGTTCAGTGGGAAAGAGGGGACGCATCTCCCTACGCCATTGCTCATTCTCCTTACAGTGCACCAAACTTGAGGCAACTCACCATATTGGAATTGGAGCAAGCGACGTGCAATTTCAGTGAAACTAATATCATAAGCCAAGGTAGATTTGGTTTGGTTTACAAGGGATTGCTTCAAGATGGGACTATTGTAGCTATCAAGAGACGCCTACATGCCCCAACTCAGTATTTCTTTCATGAGGTGAAGCACGTAGCTCGTGTCAACCACATGCATATTCTCAGGCTTATTGGTTATTGTCAAGATGCCACTCAACAGTTACTTGTATATGACTATCTTCCAAATGGAAATGTTGGGAATCATCTATACGATGCTGAAGGTTTGCCTATTGGAAGGTTGGGCATAAGGCAAAGGCTATCGATTGCTTTGGGTGCAGCCAAAGGACTTGCACACCTTCGCAGTTTGGTGCCTCCTCTTCTGCACATGCATTTTAGAACAAGCAACGTTCTTCTGGACGAAAACTTTACTGCCAAGGTGTCTGATTATGGACTAACCAAATTGCTAGTGGGTCATCATGCTGGCTCATCTTCAGCCGTTGATTGCTTTGTTGACCCAGAGTTAGATTCATCAAAGAAGTTTTCAGAGAGAAGTGATGTTTACAGTTTCGGGGTCTTCTTGCTGGAATTGGTCAGTGGACGTGAAGCGAATGCAAGAAACCAGTTGAACTCAGTGGATAATTTAATATTGCAGGCAAAGGATTGCAAGGATTTAGACAGATTTGTTGACAAAACTTTAGGTGACAAGTCGAGGCAAACTGCGAAACAGATGATGGAGCTGGCATTGATGTGTGTAGATGGTAGCGAACGAAGGCCGCAGATGCAGATTGTTGTGGAGGAGCTAGAACGAATCCATCGGGGGAGAGAAAGTAGCCATTTTCACATAGAAGTTGATGAGGAGATAGGTGCTGTGACTCTTGGGAGTGAGCTTTTCAAATGA

Protein Analysis

506

Amino Acids

56.55

Weight (kDa)

8.96

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 216 - 465 1.1e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 218 - 474 4.7e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000752)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300
malus_domestica MD03G1117600.v1.1 MD11G1135900.v1.1
prunus_persica Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1
pyrus_communis pycom11g11270
rosa_chinensis RchiOBHm_Chr5g0059091
rosa_laevigata RLG00000035279
rosa_multiflora Rmu_sc0002983.1_g000039
rosa_roxburghii Rroxscaffold_1G00021320
rosa_rugosa Rorug05G0320400 Rorug05G0320500 Rorug05G0320600 Rorug05G0320700 Rorug05G0320800 Rorug05G0320900 Rorug05G0321000 Rorug05G0321000 Rorug05G0321100
rosa_samantha Rh5AG385800 Rh5BG397300 Rh5CG421000 Rh5DG413400
rosa_wichuraiana Rw5G036320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 988
AccB7I CCANNNNNTGG 1 cut(s) 70
AccI GTMKAC 1 cut(s) 201
AciI CCGC 1 cut(s) 1394
AclI AACGTT 1 cut(s) 1026
AcuI CTGAAG 4 cut(s) 126, 236, 918, 1095
AcyI GRCGYC 1 cut(s) 730
AfiI CCNNNNNNNGG 1 cut(s) 70
AgsI TTSAA 7 cut(s) 124, 261, 266, 378, 701, 1246, 1513
AjiI CACGTC 2 cut(s) 633, 1220
AleI CACNNNNGTG 1 cut(s) 350
AluBI AGCT 8 cut(s) 43, 90, 110, 719, 779, 1357, 1420, 1507
AluI AGCT 8 cut(s) 43, 90, 110, 719, 779, 1357, 1420, 1507
Alw21I GWGCWC 2 cut(s) 282, 589
Alw26I GTCTC 2 cut(s) 494, 721
Alw44I GTGCAC 1 cut(s) 585
AoxI GGCC 1 cut(s) 1391
ApaLI GTGCAC 1 cut(s) 585
ApeKI GCWGC 4 cut(s) 43, 308, 395, 956
Asp700I GAANNNNTTC 1 cut(s) 360
AspLEI GCGC 1 cut(s) 24
AspS9I GGNCC 1 cut(s) 220
AsuHPI GGTGA 4 cut(s) 513, 598, 778, 1331
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 1 cut(s) 589
BanI GGYRCC 1 cut(s) 988
BauI CACGAG 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 1186
Bbv12I GWGCWC 2 cut(s) 282, 589
BbvI GCAGC 4 cut(s) 30, 320, 407, 968
BccI CCATC 8 cut(s) 72, 125, 314, 526, 698, 1345, 1370, 1440
BceAI ACGGC 1 cut(s) 1100
BcgI CGANNNNNNTGC 2 cut(s) 761, 795
BcoDI GTCTC 2 cut(s) 494, 721
BfaI CTAG 3 cut(s) 486, 1085, 1421
BisI GCNGC 5 cut(s) 44, 309, 396, 957, 1394
BlsI GCNGC 5 cut(s) 45, 310, 397, 958, 1395
Bme18I GGWCC 1 cut(s) 220
BmgBI CACGTC 2 cut(s) 633, 1220
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 3 cut(s) 75, 222, 990
BmsI GCATC 6 cut(s) 435, 456, 560, 817, 883, 1389
BpiI GAAGAC 1 cut(s) 1186
BpuEI CTTGAG 1 cut(s) 616
Bsa29I ATCGAT 1 cut(s) 941
BsaAI YACGTR 1 cut(s) 775
BsaHI GRCGYC 1 cut(s) 730
BsaJI CCNNGG 2 cut(s) 664, 1053
BsaXI ACNNNNNCTCC 2 cut(s) 1432, 1462
Bsc4I CCNNNNNNNGG 1 cut(s) 70
Bse1I ACTGG 1 cut(s) 1240
Bse3DI GCAATG 1 cut(s) 564
BseCI ATCGAT 1 cut(s) 941
BseDI CCNNGG 2 cut(s) 664, 1053
BseGI GGATG 1 cut(s) 60
BseLI CCNNNNNNNGG 1 cut(s) 70
BseMI GCAATG 1 cut(s) 564
BseMII CTCAG 4 cut(s) 489, 761, 817, 1263
BseNI ACTGG 1 cut(s) 1240
BseRI GAGGAG 3 cut(s) 984, 1430, 1490
BseSI GKGCMC 1 cut(s) 589
BseXI GCAGC 4 cut(s) 30, 320, 407, 968
BseYI CCCAGC 1 cut(s) 77
BsgI GTGCAG 3 cut(s) 498, 975, 986
Bsh1285I CGRYCG 1 cut(s) 160
BshFI GGCC 1 cut(s) 1393
BshNI GGYRCC 1 cut(s) 988
BshVI ATCGAT 1 cut(s) 941
BsiEI CGRYCG 1 cut(s) 160
BsiHKAI GWGCWC 2 cut(s) 282, 589
BslFI GGGAC 2 cut(s) 560, 721
BslI CCNNNNNNNGG 1 cut(s) 70
BsmAI GTCTC 2 cut(s) 494, 721
BsmBI CGTCTC 1 cut(s) 721
BsmFI GGGAC 2 cut(s) 560, 721
BsmI GAATGC 1 cut(s) 1234
BsnI GGCC 1 cut(s) 1393
Bsp1286I GDGCHC 2 cut(s) 282, 589
BspACI CCGC 1 cut(s) 1394
BspANI GGCC 1 cut(s) 1393
BspCNI CTCAG 4 cut(s) 490, 760, 816, 1262
BspDI ATCGAT 1 cut(s) 941
BspHI TCATGA 1 cut(s) 760
BspLI GGNNCC 3 cut(s) 75, 222, 990
BspT107I GGYRCC 1 cut(s) 988
BsrDI GCAATG 1 cut(s) 564
BsrI ACTGG 1 cut(s) 1240
BssECI CCNNGG 2 cut(s) 664, 1053
BssNI GRCGYC 1 cut(s) 730
BssSI CACGAG 1 cut(s) 780
BssT1I CCWWGG 2 cut(s) 664, 1053
Bst2BI CACGAG 1 cut(s) 780
Bst4CI ACNGT 6 cut(s) 158, 206, 505, 584, 840, 1184
Bst6I CTCTTC 2 cut(s) 262, 1002
BstACI GRCGYC 1 cut(s) 730
BstAPI GCANNNNNTGC 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 775
BstC8I GCNNGC 4 cut(s) 627, 1102, 1272, 1359
BstDEI CTNAG 4 cut(s) 498, 747, 803, 1249
BstEII GGTNACC 1 cut(s) 368
BstF5I GGATG 1 cut(s) 60
BstHHI GCGC 1 cut(s) 24
BstMAI GTCTC 2 cut(s) 494, 721
BstMCI CGRYCG 1 cut(s) 160
BstMWI GCNNNNNNNGC 5 cut(s) 43, 49, 87, 953, 1399
BstNSI RCATGY 3 cut(s) 740, 796, 1009
BstPI GGTNACC 1 cut(s) 368
BstSLI GKGCMC 1 cut(s) 589
BstV1I GCAGC 4 cut(s) 30, 320, 407, 968
BstV2I GAAGAC 1 cut(s) 1186
Bsu15I ATCGAT 1 cut(s) 941
BsuRI GGCC 1 cut(s) 1393
BsuTUI ATCGAT 1 cut(s) 941
BtgZI GCGATG 1 cut(s) 144
BtrI CACGTC 2 cut(s) 633, 1220
BtsCI GGATG 1 cut(s) 60
BtsIMutI CAGTG 6 cut(s) 510, 539, 589, 649, 1219, 1257
Cac8I GCNNGC 4 cut(s) 627, 1102, 1272, 1359
CciI TCATGA 1 cut(s) 760
CfoI GCGC 1 cut(s) 24
Cfr13I GGNCC 1 cut(s) 220
ClaI ATCGAT 1 cut(s) 941
CseI GACGC 2 cut(s) 557, 738
CspCI CAANNNNNGTGG 2 cut(s) 409, 444
CviAII CATG 5 cut(s) 737, 761, 793, 1006, 1097
DdeI CTNAG 4 cut(s) 498, 747, 803, 1249
Eam1104I CTCTTC 2 cut(s) 262, 1002
EarI CTCTTC 2 cut(s) 262, 1002
Eco130I CCWWGG 2 cut(s) 664, 1053
Eco47I GGWCC 1 cut(s) 220
Eco57I CTGAAG 4 cut(s) 126, 236, 918, 1095
Eco91I GGTNACC 1 cut(s) 368
EcoO109I RGGNCCY 1 cut(s) 220
EcoO65I GGTNACC 1 cut(s) 368
EcoT14I CCWWGG 2 cut(s) 664, 1053
EcoT22I ATGCAT 2 cut(s) 798, 1011
ErhI CCWWGG 2 cut(s) 664, 1053
Esp3I CGTCTC 1 cut(s) 721
FaeI CATG 5 cut(s) 740, 764, 796, 1009, 1100
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FaqI GGGAC 2 cut(s) 560, 721
FatI CATG 5 cut(s) 736, 760, 792, 1005, 1096
FblI GTMKAC 1 cut(s) 201
Fnu4HI GCNGC 5 cut(s) 44, 309, 396, 957, 1394
FokI GGATG 1 cut(s) 47
Fsp4HI GCNGC 5 cut(s) 44, 309, 396, 957, 1394
FspBI CTAG 3 cut(s) 486, 1085, 1421
GlaI GCGC 1 cut(s) 23
GluI GCNGC 5 cut(s) 44, 309, 396, 957, 1394
GsaI CCCAGC 1 cut(s) 81
HaeIII GGCC 1 cut(s) 1393
HgaI GACGC 2 cut(s) 557, 738
HhaI GCGC 1 cut(s) 24
Hin1I GRCGYC 1 cut(s) 730
Hin1II CATG 5 cut(s) 740, 764, 796, 1009, 1100
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HincII GTYRAC 3 cut(s) 787, 1132, 1306
HindII GTYRAC 3 cut(s) 787, 1132, 1306
HinfI GANTC 4 cut(s) 880, 1145, 1428, 1492
HphI GGTGA 4 cut(s) 513, 598, 778, 1331
Hpy188I TCNGA 3 cut(s) 499, 1063, 1165
Hpy188III TCNNGA 6 cut(s) 124, 701, 724, 761, 824, 1034
Hpy99I CGWCG 1 cut(s) 634
HpyAV CCTTC 5 cut(s) 211, 893, 909, 986, 1383
HpyCH4III ACNGT 6 cut(s) 158, 206, 505, 584, 840, 1184
HpyCH4IV ACGT 4 cut(s) 632, 774, 1026, 1219
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 49, 87, 953, 1399
HpyF3I CTNAG 4 cut(s) 498, 747, 803, 1249
HpySE526I ACGT 4 cut(s) 632, 774, 1026, 1219
Hsp92I GRCGYC 1 cut(s) 730
Hsp92II CATG 5 cut(s) 740, 764, 796, 1009, 1100
HspAI GCGC 1 cut(s) 22
LmnI GCTCC 3 cut(s) 622, 1354, 1417
Lsp1109I GCAGC 4 cut(s) 30, 320, 407, 968
LweI GCATC 6 cut(s) 435, 456, 560, 817, 883, 1389
MaeI CTAG 3 cut(s) 486, 1085, 1421
MaeII ACGT 4 cut(s) 632, 774, 1026, 1219
MaeIII GTNAC 5 cut(s) 247, 368, 840, 1319, 1489
MboII GAAGA 7 cut(s) 180, 249, 851, 989, 1022, 1101, 1186
MhlI GDGCHC 2 cut(s) 282, 589
MluCI AATT 9 cut(s) 162, 195, 261, 399, 617, 637, 1079, 1205, 1258
MlyI GAGTC 1 cut(s) 1486
MmeI TCCRAC 1 cut(s) 362
Mph1103I ATGCAT 2 cut(s) 798, 1011
MroXI GAANNNNTTC 1 cut(s) 360
MseI TTAA 2 cut(s) 482, 1262
MslI CAYNNNNRTG 2 cut(s) 350, 1366
MspA1I CMGCKG 1 cut(s) 43
Mva1269I GAATGC 1 cut(s) 1234
MwoI GCNNNNNNNGC 5 cut(s) 43, 49, 87, 953, 1399
NlaIII CATG 5 cut(s) 740, 764, 796, 1009, 1100
NlaIV GGNNCC 3 cut(s) 75, 222, 990
NmuCI GTSAC 2 cut(s) 1319, 1489
NsiI ATGCAT 2 cut(s) 798, 1011
NspI RCATGY 3 cut(s) 740, 796, 1009
OliI CACNNNNGTG 1 cut(s) 350
PagI TCATGA 1 cut(s) 760
PctI GAATGC 1 cut(s) 1234
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 3 cut(s) 880, 1145, 1428
PflFI GACNNNGTC 1 cut(s) 505
PflMI CCANNNNNTGG 1 cut(s) 70
PkrI GCNGC 5 cut(s) 45, 310, 397, 958, 1395
PleI GAGTC 1 cut(s) 1486
PpsI GAGTC 1 cut(s) 1486
Ppu21I YACGTR 1 cut(s) 775
PpuMI RGGWCCY 1 cut(s) 220
Psp1406I AACGTT 1 cut(s) 1026
Psp5II RGGWCCY 1 cut(s) 220
PspEI GGTNACC 1 cut(s) 368
PspFI CCCAGC 1 cut(s) 77
PspN4I GGNNCC 3 cut(s) 75, 222, 990
PspPI GGNCC 1 cut(s) 220
PspPPI RGGWCCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 505
PvuII CAGCTG 1 cut(s) 43
RseI CAYNNNNRTG 2 cut(s) 350, 1366
SaqAI TTAA 2 cut(s) 482, 1262
SatI GCNGC 5 cut(s) 44, 309, 396, 957, 1394
Sau96I GGNCC 1 cut(s) 220
SchI GAGTC 1 cut(s) 1486
SduI GDGCHC 2 cut(s) 282, 589
SfaNI GCATC 6 cut(s) 435, 456, 560, 817, 883, 1389
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 2 cut(s) 350, 1366
SmlI CTYRAG 1 cut(s) 595
SmoI CTYRAG 1 cut(s) 595
Sse9I AATT 9 cut(s) 162, 195, 261, 399, 617, 637, 1079, 1205, 1258
SsiI CCGC 1 cut(s) 1394
SspI AATATT 1 cut(s) 1266
SspMI CTAG 3 cut(s) 486, 1085, 1421
StyI CCWWGG 2 cut(s) 664, 1053
TaaI ACNGT 6 cut(s) 158, 206, 505, 584, 840, 1184
TaiI ACGT 4 cut(s) 635, 777, 1029, 1222
TaqI TCGA 3 cut(s) 160, 941, 1328
TasI AATT 9 cut(s) 162, 195, 261, 399, 617, 637, 1079, 1205, 1258
TauI GCSGC 1 cut(s) 1396
TfiI GAWTC 3 cut(s) 880, 1145, 1428
Tru1I TTAA 2 cut(s) 482, 1262
Tru9I TTAA 2 cut(s) 482, 1262
TscAI CASTG 6 cut(s) 510, 539, 589, 649, 1219, 1257
TseFI GTSAC 2 cut(s) 1319, 1489
TseI GCWGC 4 cut(s) 43, 308, 395, 956
Tsp45I GTSAC 2 cut(s) 1319, 1489
TspDTI ATGAA 2 cut(s) 749, 1137
TspRI CASTG 6 cut(s) 510, 539, 589, 649, 1219, 1257
Tth111I GACNNNGTC 1 cut(s) 505
Van91I CCANNNNNTGG 1 cut(s) 70
VneI GTGCAC 1 cut(s) 585
VpaK11BI GGWCC 1 cut(s) 220
XceI RCATGY 3 cut(s) 740, 796, 1009
XcmI CCANNNNNNNNNTGG 3 cut(s) 616, 671, 1084
XmiI GTMKAC 1 cut(s) 201
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 3 cut(s) 486, 1085, 1421
Zsp2I ATGCAT 2 cut(s) 798, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.