pycom11g11270

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
9807690 .. 9812935
5246 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g11270.3

Sequence Viewer

Length: 1584 bp
ATGTTGGGCTTATTGACAATGCGCTTGTTCTGCTGGCAACAGCTGCCTCTGCTTATTCTCATCCATCTTTTGGAACCCAGCAGAACAAGCTACAAAGTTTACGCTGAAGCTCTACTAACTTTCAAGAGCGATGGTGGAAGCCCACAACTACTCAAAGGTCGAATTGGAAGATGTCCTTGTCTAACACAATGGAAAATTGTCAACTGTCATAAACTGAAGGACCCATGTGTTGTTTCTTTGTTTTCTGGTATCTGTTCAGTTCCCCTGCGGGCTAACGCAGTCAGTTTGCCACCTTTTGTTCCAAGACTTTTCATTACACACTCTTCAATTCAACTACAAAAAGGGCACCATAAACCAAGAAGCAGGAGGATAGCAGCCATAGTTGATGGGGATAATGGAACTCCAACACTCACACCTGTGGAAAAAGTTCGTGGTAACCATTCAACAAAACCAAAAGTTGCAGCAATTATTGGTGGAGTTGTTGCCACTCTGCTTGTGATTATCGTAGTGATGCTCATTTACATGTGCTTGATGCGTGTAAAAAGATTAACTAGGCAAACATCTGAGACAGTGTCATCTGCACCATCACCTCCTGTTCAGTGGGAAAGAGGGGACGCATCTCCCTATGCCGTTGCTCATTCTCCTTACAATGCACCAAACTTGAGGCAACTCACCATATTGGAATTGGAGCAAGCGACAAGCAATTTCAGTGAAACTAATATCATAAGCCAAGGTAGATTTGGATTGGTCTACAAGGGATTGCTCCAAGATGGGACTATTGTAGCTATCAAGAGACGCCTACATGCCCCAACTCAGTATTTCTTTCATGAGGTGAAGCACGTAGCTCGTGTCAACCACATGCATATTCTCAGGCTTATTGGTTATTGTCAAGATGCTACTCAACAGTTACTTGTATATGACTATCTTCCAAATGGAAATGTTGGGAATCATCTATATGATGCTGAAGGTTTGCCTATTGGAAGGTTGGGCATAAGGCAAAGGCTATTGATTGCTTTGGGAGCAGCCAAAGGACTTGCACACCTTCGCAGTTTGGTGCCTCCTCTTCTGCACATGCATTTTAGAACAAGCAACGTTCTTCTGGACGAAAACTTTACTGCCAAGGTGTCTGATTATGGACTAACCAAATTGCTAGTGGGTCATCATGCTGGCTCATCTTCAGCCGTTGATTGCTTTGTTGACCCAGAGTTAGATTCATCAAAGAAGTTTTCAGAGAGAAGTGATGTTTACAGTTTCGGGGTCTTCTTACTGGAATTGGTCAGTGGACGTGAAGCGAATGCAAGAAACCAGTTGAACTCAGTGGATAATTTAATATTGCAGGCAAAGGATTGCAAGGATTTAGGCAGATTTGTTGACAAAACTTTAGGTGACAAGTCGTGGCAAACTGCAAAACAGATGATGGAGCTGGCATTGATGTGTGTAGATGGTAGCGAACGAAGGCCGCAGATGCAGATTGTTGTGGAGGTGCTAGAACGAATCCATCGAGGGAGAGAAAGTAGCCATTTTCATATAGAAGTTGATGAGGAGATAGGTGCTGTGACTCTTGGGAGTGAGCTTTTCAAATGA

Protein Analysis

528

Amino Acids

58.68

Weight (kDa)

9.25

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000752)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300
malus_domestica MD03G1117600.v1.1 MD11G1135900.v1.1
prunus_persica Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1
pyrus_communis pycom11g11270
rosa_chinensis RchiOBHm_Chr5g0059091
rosa_laevigata RLG00000035279
rosa_multiflora Rmu_sc0002983.1_g000039
rosa_roxburghii Rroxscaffold_1G00021320
rosa_rugosa Rorug05G0320400 Rorug05G0320500 Rorug05G0320600 Rorug05G0320700 Rorug05G0320800 Rorug05G0320900 Rorug05G0321000 Rorug05G0321000 Rorug05G0321100
rosa_samantha Rh5AG385800 Rh5BG397300 Rh5CG421000 Rh5DG413400
rosa_wichuraiana Rw5G036320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 345, 1054
AccB7I CCANNNNNTGG 1 cut(s) 70
AccI GTMKAC 1 cut(s) 750
AciI CCGC 2 cut(s) 268, 1460
AclI AACGTT 1 cut(s) 1092
AcuI CTGAAG 4 cut(s) 126, 236, 984, 1161
AcyI GRCGYC 1 cut(s) 796
AfiI CCNNNNNNNGG 1 cut(s) 70
AflIII ACRYGT 1 cut(s) 522
AgsI TTSAA 6 cut(s) 124, 327, 332, 444, 1312, 1579
AjiI CACGTC 1 cut(s) 1286
AleI CACNNNNGTG 1 cut(s) 416
AluBI AGCT 7 cut(s) 43, 90, 110, 785, 845, 1423, 1573
AluI AGCT 7 cut(s) 43, 90, 110, 785, 845, 1423, 1573
Alw26I GTCTC 2 cut(s) 560, 787
AoxI GGCC 1 cut(s) 1457
ApeKI GCWGC 4 cut(s) 43, 374, 461, 1022
Asp700I GAANNNNTTC 1 cut(s) 426
AspLEI GCGC 1 cut(s) 24
AspS9I GGNCC 1 cut(s) 220
AsuHPI GGTGA 4 cut(s) 579, 664, 844, 1397
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 1 cut(s) 348
BanI GGYRCC 2 cut(s) 345, 1054
BauI CACGAG 1 cut(s) 846
BbsI GAAGAC 1 cut(s) 1252
BbvI GCAGC 4 cut(s) 30, 386, 473, 1034
BccI CCATC 8 cut(s) 72, 125, 380, 592, 764, 1411, 1436, 1506
BceAI ACGGC 2 cut(s) 614, 1166
BcgI CGANNNNNNTGC 2 cut(s) 827, 861
BcoDI GTCTC 2 cut(s) 560, 787
BfaI CTAG 3 cut(s) 552, 1151, 1487
BisI GCNGC 5 cut(s) 44, 375, 462, 1023, 1460
BlsI GCNGC 5 cut(s) 45, 376, 463, 1024, 1461
Bme18I GGWCC 1 cut(s) 220
BmgBI CACGTC 1 cut(s) 1286
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 4 cut(s) 75, 222, 347, 1056
BmsI GCATC 6 cut(s) 501, 522, 626, 883, 949, 1455
BpiI GAAGAC 1 cut(s) 1252
BpuEI CTTGAG 1 cut(s) 682
BsaAI YACGTR 1 cut(s) 841
BsaHI GRCGYC 1 cut(s) 796
BsaJI CCNNGG 2 cut(s) 730, 1119
BsaXI ACNNNNNCTCC 2 cut(s) 1498, 1528
Bsc4I CCNNNNNNNGG 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 1272, 1306
BseDI CCNNGG 2 cut(s) 730, 1119
BseGI GGATG 1 cut(s) 60
BseLI CCNNNNNNNGG 1 cut(s) 70
BseMII CTCAG 4 cut(s) 555, 827, 883, 1329
BseNI ACTGG 2 cut(s) 1272, 1306
BseRI GAGGAG 2 cut(s) 1050, 1556
BseSI GKGCMC 1 cut(s) 348
BseXI GCAGC 4 cut(s) 30, 386, 473, 1034
BseYI CCCAGC 1 cut(s) 77
BsgI GTGCAG 2 cut(s) 564, 1052
BshFI GGCC 1 cut(s) 1459
BshNI GGYRCC 2 cut(s) 345, 1054
BslFI GGGAC 2 cut(s) 626, 787
BslI CCNNNNNNNGG 1 cut(s) 70
BsmAI GTCTC 2 cut(s) 560, 787
BsmBI CGTCTC 1 cut(s) 787
BsmFI GGGAC 2 cut(s) 626, 787
BsmI GAATGC 1 cut(s) 1300
BsnI GGCC 1 cut(s) 1459
Bsp1286I GDGCHC 1 cut(s) 348
BspACI CCGC 2 cut(s) 268, 1460
BspANI GGCC 1 cut(s) 1459
BspCNI CTCAG 4 cut(s) 556, 826, 882, 1328
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 4 cut(s) 75, 222, 347, 1056
BspT107I GGYRCC 2 cut(s) 345, 1054
BsrI ACTGG 2 cut(s) 1272, 1306
BssECI CCNNGG 2 cut(s) 730, 1119
BssNI GRCGYC 1 cut(s) 796
BssSI CACGAG 1 cut(s) 846
BssT1I CCWWGG 2 cut(s) 730, 1119
Bst2BI CACGAG 1 cut(s) 846
Bst4CI ACNGT 4 cut(s) 206, 571, 906, 1250
Bst6I CTCTTC 2 cut(s) 328, 1068
BstACI GRCGYC 1 cut(s) 796
BstAPI GCANNNNNTGC 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 841
BstC8I GCNNGC 6 cut(s) 35, 270, 693, 1168, 1338, 1425
BstDEI CTNAG 4 cut(s) 564, 813, 869, 1315
BstEII GGTNACC 1 cut(s) 434
BstF5I GGATG 1 cut(s) 60
BstHHI GCGC 1 cut(s) 24
BstMAI GTCTC 2 cut(s) 560, 787
BstMWI GCNNNNNNNGC 6 cut(s) 30, 43, 49, 87, 1019, 1465
BstNSI RCATGY 4 cut(s) 526, 806, 862, 1075
BstPI GGTNACC 1 cut(s) 434
BstSLI GKGCMC 1 cut(s) 348
BstV1I GCAGC 4 cut(s) 30, 386, 473, 1034
BstV2I GAAGAC 1 cut(s) 1252
BsuRI GGCC 1 cut(s) 1459
BtgZI GCGATG 1 cut(s) 144
BtrI CACGTC 1 cut(s) 1286
BtsCI GGATG 1 cut(s) 60
BtsIMutI CAGTG 5 cut(s) 576, 605, 715, 1285, 1323
Cac8I GCNNGC 6 cut(s) 35, 270, 693, 1168, 1338, 1425
CciI TCATGA 1 cut(s) 826
CfoI GCGC 1 cut(s) 24
Cfr13I GGNCC 1 cut(s) 220
CseI GACGC 2 cut(s) 623, 804
CspCI CAANNNNNGTGG 2 cut(s) 475, 510
CviAII CATG 7 cut(s) 225, 523, 803, 827, 859, 1072, 1163
DdeI CTNAG 4 cut(s) 564, 813, 869, 1315
Eam1104I CTCTTC 2 cut(s) 328, 1068
EarI CTCTTC 2 cut(s) 328, 1068
Eco130I CCWWGG 2 cut(s) 730, 1119
Eco47I GGWCC 1 cut(s) 220
Eco57I CTGAAG 4 cut(s) 126, 236, 984, 1161
Eco91I GGTNACC 1 cut(s) 434
EcoO109I RGGNCCY 1 cut(s) 220
EcoO65I GGTNACC 1 cut(s) 434
EcoT14I CCWWGG 2 cut(s) 730, 1119
EcoT22I ATGCAT 2 cut(s) 864, 1077
ErhI CCWWGG 2 cut(s) 730, 1119
Esp3I CGTCTC 1 cut(s) 787
FaeI CATG 7 cut(s) 228, 526, 806, 830, 862, 1075, 1166
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FaqI GGGAC 2 cut(s) 626, 787
FatI CATG 7 cut(s) 224, 522, 802, 826, 858, 1071, 1162
FauI CCCGC 1 cut(s) 261
FblI GTMKAC 1 cut(s) 750
Fnu4HI GCNGC 5 cut(s) 44, 375, 462, 1023, 1460
FokI GGATG 1 cut(s) 47
Fsp4HI GCNGC 5 cut(s) 44, 375, 462, 1023, 1460
FspBI CTAG 3 cut(s) 552, 1151, 1487
GlaI GCGC 1 cut(s) 23
GluI GCNGC 5 cut(s) 44, 375, 462, 1023, 1460
GsaI CCCAGC 1 cut(s) 81
HaeIII GGCC 1 cut(s) 1459
HgaI GACGC 2 cut(s) 623, 804
HhaI GCGC 1 cut(s) 24
Hin1I GRCGYC 1 cut(s) 796
Hin1II CATG 7 cut(s) 228, 526, 806, 830, 862, 1075, 1166
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HincII GTYRAC 4 cut(s) 202, 853, 1198, 1372
HindII GTYRAC 4 cut(s) 202, 853, 1198, 1372
HinfI GANTC 4 cut(s) 946, 1211, 1494, 1558
HphI GGTGA 4 cut(s) 579, 664, 844, 1397
Hpy166II GTNNAC 8 cut(s) 100, 202, 751, 853, 1198, 1246, 1283, 1372
Hpy188I TCNGA 3 cut(s) 565, 1129, 1231
Hpy188III TCNNGA 5 cut(s) 124, 790, 827, 890, 1100
Hpy8I GTNNAC 8 cut(s) 100, 202, 751, 853, 1198, 1246, 1283, 1372
HpyAV CCTTC 5 cut(s) 211, 959, 975, 1052, 1449
HpyCH4III ACNGT 4 cut(s) 206, 571, 906, 1250
HpyCH4IV ACGT 3 cut(s) 840, 1092, 1285
HpyF10VI GCNNNNNNNGC 6 cut(s) 30, 43, 49, 87, 1019, 1465
HpyF3I CTNAG 4 cut(s) 564, 813, 869, 1315
HpySE526I ACGT 3 cut(s) 840, 1092, 1285
Hsp92I GRCGYC 1 cut(s) 796
Hsp92II CATG 7 cut(s) 228, 526, 806, 830, 862, 1075, 1166
HspAI GCGC 1 cut(s) 22
LmnI GCTCC 4 cut(s) 688, 768, 1019, 1420
Lsp1109I GCAGC 4 cut(s) 30, 386, 473, 1034
LweI GCATC 6 cut(s) 501, 522, 626, 883, 949, 1455
MaeI CTAG 3 cut(s) 552, 1151, 1487
MaeII ACGT 3 cut(s) 840, 1092, 1285
MaeIII GTNAC 4 cut(s) 434, 906, 1385, 1555
MboII GAAGA 7 cut(s) 180, 315, 917, 1055, 1088, 1167, 1252
MhlI GDGCHC 1 cut(s) 348
MluCI AATT 9 cut(s) 162, 195, 327, 465, 683, 703, 1145, 1271, 1324
MlyI GAGTC 1 cut(s) 1552
MmeI TCCRAC 1 cut(s) 428
Mph1103I ATGCAT 2 cut(s) 864, 1077
MroXI GAANNNNTTC 1 cut(s) 426
MseI TTAA 2 cut(s) 548, 1328
MslI CAYNNNNRTG 4 cut(s) 416, 521, 954, 1432
MspA1I CMGCKG 1 cut(s) 43
Mva1269I GAATGC 1 cut(s) 1300
MwoI GCNNNNNNNGC 6 cut(s) 30, 43, 49, 87, 1019, 1465
NlaIII CATG 7 cut(s) 228, 526, 806, 830, 862, 1075, 1166
NlaIV GGNNCC 4 cut(s) 75, 222, 347, 1056
NmuCI GTSAC 2 cut(s) 1385, 1555
NsiI ATGCAT 2 cut(s) 864, 1077
NspI RCATGY 4 cut(s) 526, 806, 862, 1075
OliI CACNNNNGTG 1 cut(s) 416
PagI TCATGA 1 cut(s) 826
PciI ACATGT 1 cut(s) 522
PcsI WCGNNNNNNNCGW 1 cut(s) 1498
PctI GAATGC 1 cut(s) 1300
PdmI GAANNNNTTC 1 cut(s) 426
PfeI GAWTC 3 cut(s) 946, 1211, 1494
PflFI GACNNNGTC 1 cut(s) 571
PflMI CCANNNNNTGG 1 cut(s) 70
PkrI GCNGC 5 cut(s) 45, 376, 463, 1024, 1461
PleI GAGTC 1 cut(s) 1552
PpsI GAGTC 1 cut(s) 1552
Ppu21I YACGTR 1 cut(s) 841
PpuMI RGGWCCY 1 cut(s) 220
PscI ACATGT 1 cut(s) 522
Psp1406I AACGTT 1 cut(s) 1092
Psp5II RGGWCCY 1 cut(s) 220
PspEI GGTNACC 1 cut(s) 434
PspFI CCCAGC 1 cut(s) 77
PspN4I GGNNCC 4 cut(s) 75, 222, 347, 1056
PspPI GGNCC 1 cut(s) 220
PspPPI RGGWCCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 571
PvuII CAGCTG 1 cut(s) 43
RseI CAYNNNNRTG 4 cut(s) 416, 521, 954, 1432
SaqAI TTAA 2 cut(s) 548, 1328
SatI GCNGC 5 cut(s) 44, 375, 462, 1023, 1460
Sau96I GGNCC 1 cut(s) 220
SchI GAGTC 1 cut(s) 1552
SduI GDGCHC 1 cut(s) 348
SfaNI GCATC 6 cut(s) 501, 522, 626, 883, 949, 1455
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 4 cut(s) 416, 521, 954, 1432
SmlI CTYRAG 1 cut(s) 661
SmoI CTYRAG 1 cut(s) 661
Sse9I AATT 9 cut(s) 162, 195, 327, 465, 683, 703, 1145, 1271, 1324
SsiI CCGC 2 cut(s) 268, 1460
SspI AATATT 1 cut(s) 1332
SspMI CTAG 3 cut(s) 552, 1151, 1487
StyI CCWWGG 2 cut(s) 730, 1119
TaaI ACNGT 4 cut(s) 206, 571, 906, 1250
TaiI ACGT 3 cut(s) 843, 1095, 1288
TaqI TCGA 2 cut(s) 160, 1501
TasI AATT 9 cut(s) 162, 195, 327, 465, 683, 703, 1145, 1271, 1324
TauI GCSGC 1 cut(s) 1462
TfiI GAWTC 3 cut(s) 946, 1211, 1494
Tru1I TTAA 2 cut(s) 548, 1328
Tru9I TTAA 2 cut(s) 548, 1328
TscAI CASTG 5 cut(s) 576, 605, 715, 1285, 1323
TseFI GTSAC 2 cut(s) 1385, 1555
TseI GCWGC 4 cut(s) 43, 374, 461, 1022
Tsp45I GTSAC 2 cut(s) 1385, 1555
TspDTI ATGAA 4 cut(s) 301, 815, 1203, 1514
TspRI CASTG 5 cut(s) 576, 605, 715, 1285, 1323
Tth111I GACNNNGTC 1 cut(s) 571
Van91I CCANNNNNTGG 1 cut(s) 70
VpaK11BI GGWCC 1 cut(s) 220
XceI RCATGY 4 cut(s) 526, 806, 862, 1075
XcmI CCANNNNNNNNNTGG 3 cut(s) 682, 737, 1150
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 1 cut(s) 426
XspI CTAG 3 cut(s) 552, 1151, 1487
Zsp2I ATGCAT 2 cut(s) 864, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.