Rorug05G0320400

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
38007449 .. 38009633
2185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0320400.1

Sequence Viewer

Length: 1209 bp
ATGTACTGGTGTGCATTAATTCTCATACTGATCTTGTCCTCCTCCTCTCTCGCCACCTCTGCTCATAAGAGAACCAAAATTTGTATTCCCATCAACCCCATGAACATCACCAACTGCAAGAAACTACTCACCTTGGGAGCTGAACTCGGCTGGAACATCCACAACGAAACCCACATTGACATCTTGTTCACCATTCCAATATCTATGGACGACACACCAAAATGGGTCGCCTGGGGTGTGAACCCGCGTCGGAAAAGGCCGCGGATGATCGGAACCAGGGCCATTATCGCCATTTCACAGGCCAACGGGACTTTGAAGGTCAGCAGATACAACATCACCAGTGACACCAAGCTGGGATGTCGTTTGCAGCCTCTGCAGCCTTCCATAGAGTTCGAGGATGTCGTCGTCCAAAACATGACAGGTGATGTGAAACCTAACAGATACATGTCAATTTTTGCGACGCTAATTTTGCGTCCAGATTTAGCTGCGTACGACATTGCAAGGTTGAACCATGTGTGGCAAGTTGGGTATGAAGCTGATGAGGTTGCTCTGGAGCCTAAGATGCACCCGACGGCTCTCCAGAACGTGGATAGCACAGAGACTACAAACTTGTACAGTTGGAAAGGTATCAGCATTGAACATCGCCGGCATCATCTTAGAACGGTGCATGGGATTCTGAATATTGTGGGATGGGGAACATTGTTGCCCTTTGGAGTGATTATAGCGAGGTACTTGAGAAGATATCCCTTTCATTGTACACATTGGTTTTTATCGCACGTCTCTTGTCAGATCGTTGGTTACATTCTCGGCACGATTGGTTGGGCAATCGGAATATGGCTCGGACATGCTTCCAAAGAATATCACTTCCACACTCACAATATTCTCGCCATGTTCATATTTGCATTTACAACATTACAAATGATTGCTCTGCGTTTAAGGCCAACGCCAATAGATGATTTCCGGAAATACTGGGACATGTACCATCATTTTCTGGGCTACGCACTTCTGGCTGTGATCATATTGAATATATTCCATGGCATTGCCATTTTGAAGCCAGACAAAACCTGGCTATGCGCTTATATTGGAACCCTTGCAGTGCTTGCTTCCATCACATTGGGTTTGGAGATTTATACTTGGTGTAAATTCATGAATTCCAAAATGAAGAAACCAAACACTTCCGGAGAAGTTCAACCCGTACCTAGTAGTTAG

Protein Analysis

402

Amino Acids

45.83

Weight (kDa)

9.36

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF568 PF04526 89 - 204 5.8e-19 Protein of unknown function (DUF568)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000752)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300 FvH4_3g32300
malus_domestica MD03G1117600.v1.1 MD11G1135900.v1.1
prunus_persica Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1 Prupe.6G101300_v2.0.a1
pyrus_communis pycom11g11270
rosa_chinensis RchiOBHm_Chr5g0059091
rosa_laevigata RLG00000035279
rosa_multiflora Rmu_sc0002983.1_g000039
rosa_roxburghii Rroxscaffold_1G00021320
rosa_rugosa Rorug05G0320400 Rorug05G0320500 Rorug05G0320600 Rorug05G0320700 Rorug05G0320800 Rorug05G0320900 Rorug05G0321000 Rorug05G0321000 Rorug05G0321100
rosa_samantha Rh5AG385800 Rh5BG397300 Rh5CG421000 Rh5DG413400
rosa_wichuraiana Rw5G036320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 586
AccII CGCG 2 cut(s) 247, 262
AccIII TCCGGA 2 cut(s) 960, 1178
AciI CCGC 3 cut(s) 245, 260, 262
AcsI RAATTY 3 cut(s) 78, 1142, 1150
AfaI GTAC 7 cut(s) 5, 491, 614, 731, 757, 980, 1197
AfiI CCNNNNNNNGG 1 cut(s) 586
AflIII ACRYGT 2 cut(s) 444, 975
AgsI TTSAA 6 cut(s) 316, 508, 638, 1024, 1051, 1190
AjiI CACGTC 1 cut(s) 778
AjnI CCWGG 3 cut(s) 230, 275, 1064
AluBI AGCT 4 cut(s) 140, 352, 485, 536
AluI AGCT 4 cut(s) 140, 352, 485, 536
Alw26I GTCTC 2 cut(s) 593, 784
AlwNI CAGNNNCTG 1 cut(s) 373
Aor13HI TCCGGA 2 cut(s) 960, 1178
AoxI GGCC 4 cut(s) 257, 279, 300, 938
ApeKI GCWGC 3 cut(s) 367, 376, 485
ApoI RAATTY 3 cut(s) 78, 1142, 1150
ArsI GACNNNNNNTTYG 2 cut(s) 451, 483
AseI ATTAAT 1 cut(s) 17
Asp700I GAANNNNTTC 1 cut(s) 1028
AspLEI GCGC 1 cut(s) 1076
AspS9I GGNCC 1 cut(s) 279
AsuHPI GGTGA 5 cut(s) 100, 121, 181, 328, 434
BbvI GCAGC 3 cut(s) 379, 388, 472
BccI CCATC 4 cut(s) 98, 684, 990, 1115
BceAI ACGGC 1 cut(s) 588
BciT130I CCWGG 3 cut(s) 232, 277, 1066
BclI TGATCA 1 cut(s) 1014
BcoDI GTCTC 2 cut(s) 593, 784
BfaI CTAG 1 cut(s) 1200
BfmI CTRYAG 1 cut(s) 374
BisI GCNGC 4 cut(s) 260, 368, 377, 486
BlsI GCNGC 4 cut(s) 261, 369, 378, 487
Bme1390I CCNGG 3 cut(s) 232, 277, 1066
BmgBI CACGTC 1 cut(s) 778
BmgT120I GGNCC 1 cut(s) 279
BmiI GGNNCC 3 cut(s) 274, 555, 1087
BmrFI CCNGG 3 cut(s) 232, 277, 1066
BmrI ACTGGG 1 cut(s) 979
BmsI GCATC 2 cut(s) 552, 658
BmuI ACTGGG 1 cut(s) 979
BplI GAGNNNNNCTC 2 cut(s) 129, 161
BpmI CTGGAG 2 cut(s) 563, 572
BpuEI CTTGAG 1 cut(s) 754
BsaJI CCNNGG 5 cut(s) 132, 231, 260, 276, 1033
BsaWI WCCGGW 2 cut(s) 960, 1178
Bsc4I CCNNNNNNNGG 1 cut(s) 586
Bse118I RCCGGY 1 cut(s) 645
Bse1I ACTGG 3 cut(s) 11, 339, 974
Bse3DI GCAATG 2 cut(s) 495, 1038
BseAI TCCGGA 2 cut(s) 960, 1178
BseBI CCWGG 3 cut(s) 232, 277, 1066
BseDI CCNNGG 5 cut(s) 132, 231, 260, 276, 1033
BseGI GGATG 5 cut(s) 156, 270, 362, 403, 695
BseLI CCNNNNNNNGG 1 cut(s) 586
BseMI GCAATG 2 cut(s) 495, 1038
BseNI ACTGG 3 cut(s) 11, 339, 974
BseRI GAGGAG 2 cut(s) 31, 34
BseXI GCAGC 3 cut(s) 379, 388, 472
BseYI CCCAGC 1 cut(s) 352
Bsh1236I CGCG 2 cut(s) 247, 262
BshFI GGCC 4 cut(s) 259, 281, 302, 940
BsiSI CCGG 3 cut(s) 646, 961, 1179
BsiWI CGTACG 1 cut(s) 489
BslFI GGGAC 2 cut(s) 322, 986
BslI CCNNNNNNNGG 1 cut(s) 586
BsmAI GTCTC 2 cut(s) 593, 784
BsmBI CGTCTC 1 cut(s) 784
BsmFI GGGAC 2 cut(s) 322, 986
BsnI GGCC 4 cut(s) 259, 281, 302, 940
Bsp13I TCCGGA 2 cut(s) 960, 1178
Bsp1407I TGTACA 2 cut(s) 612, 755
Bsp143I GATC 4 cut(s) 30, 267, 789, 1014
Bsp19I CCATGG 1 cut(s) 1033
BspACI CCGC 3 cut(s) 245, 260, 262
BspANI GGCC 4 cut(s) 259, 281, 302, 940
BspEI TCCGGA 2 cut(s) 960, 1178
BspFNI CGCG 2 cut(s) 247, 262
BspHI TCATGA 1 cut(s) 1146
BspLI GGNNCC 3 cut(s) 274, 555, 1087
BspMAI CTGCAG 1 cut(s) 378
BsrDI GCAATG 2 cut(s) 495, 1038
BsrFI RCCGGY 1 cut(s) 645
BsrGI TGTACA 2 cut(s) 612, 755
BsrI ACTGG 3 cut(s) 11, 339, 974
BssAI RCCGGY 1 cut(s) 645
BssECI CCNNGG 5 cut(s) 132, 231, 260, 276, 1033
BssMI GATC 4 cut(s) 30, 267, 789, 1014
BssT1I CCWWGG 2 cut(s) 132, 1033
Bst2UI CCWGG 3 cut(s) 232, 277, 1066
Bst4CI ACNGT 2 cut(s) 617, 664
BstAPI GCANNNNNTGC 2 cut(s) 373, 1100
BstAUI TGTACA 2 cut(s) 612, 755
BstC8I GCNNGC 2 cut(s) 647, 1101
BstDEI CTNAG 2 cut(s) 558, 656
BstDSI CCRYGG 2 cut(s) 260, 1033
BstF5I GGATG 5 cut(s) 156, 270, 362, 403, 695
BstFNI CGCG 2 cut(s) 247, 262
BstHHI GCGC 1 cut(s) 1076
BstKTI GATC 4 cut(s) 33, 270, 792, 1017
BstMAI GTCTC 2 cut(s) 593, 784
BstMBI GATC 4 cut(s) 30, 267, 789, 1014
BstMWI GCNNNNNNNGC 9 cut(s) 59, 287, 373, 376, 469, 562, 937, 1007, 1100
BstNI CCWGG 3 cut(s) 232, 277, 1066
BstNSI RCATGY 3 cut(s) 448, 848, 979
BstSCI CCNGG 3 cut(s) 230, 275, 1064
BstSFI CTRYAG 1 cut(s) 374
BstUI CGCG 2 cut(s) 247, 262
BstV1I GCAGC 3 cut(s) 379, 388, 472
BstXI CCANNNNNNTGG 1 cut(s) 1114
BsuRI GGCC 4 cut(s) 259, 281, 302, 940
BtgI CCRYGG 2 cut(s) 260, 1033
BtgZI GCGATG 1 cut(s) 626
BtrI CACGTC 1 cut(s) 778
BtsCI GGATG 5 cut(s) 156, 270, 362, 403, 695
BtsI GCAGTG 1 cut(s) 1101
BtsIMutI CAGTG 2 cut(s) 346, 1101
Cac8I GCNNGC 2 cut(s) 647, 1101
CaiI CAGNNNCTG 1 cut(s) 373
CciI TCATGA 1 cut(s) 1146
CfoI GCGC 1 cut(s) 1076
Cfr10I RCCGGY 1 cut(s) 645
Cfr13I GGNCC 1 cut(s) 279
Cfr42I CCGCGG 1 cut(s) 263
CseI GACGC 3 cut(s) 236, 461, 469
Csp6I GTAC 7 cut(s) 4, 490, 613, 730, 756, 979, 1196
CviQI GTAC 7 cut(s) 4, 490, 613, 730, 756, 979, 1196
DdeI CTNAG 2 cut(s) 558, 656
DpnI GATC 4 cut(s) 32, 269, 791, 1016
DpnII GATC 4 cut(s) 30, 267, 789, 1014
Eco130I CCWWGG 2 cut(s) 132, 1033
Eco32I GATATC 1 cut(s) 743
EcoRI GAATTC 1 cut(s) 1150
EcoRII CCWGG 3 cut(s) 230, 275, 1064
EcoRV GATATC 1 cut(s) 743
EcoT14I CCWWGG 2 cut(s) 132, 1033
ErhI CCWWGG 2 cut(s) 132, 1033
Esp3I CGTCTC 1 cut(s) 784
FaqI GGGAC 2 cut(s) 322, 986
FauI CCCGC 1 cut(s) 252
FbaI TGATCA 1 cut(s) 1014
Fnu4HI GCNGC 4 cut(s) 260, 368, 377, 486
FokI GGATG 5 cut(s) 143, 277, 369, 410, 702
Fsp4HI GCNGC 4 cut(s) 260, 368, 377, 486
FspBI CTAG 1 cut(s) 1200
GlaI GCGC 1 cut(s) 1075
GluI GCNGC 4 cut(s) 260, 368, 377, 486
GsaI CCCAGC 1 cut(s) 356
GsuI CTGGAG 2 cut(s) 563, 572
HaeIII GGCC 4 cut(s) 259, 281, 302, 940
HapII CCGG 3 cut(s) 646, 961, 1179
HgaI GACGC 3 cut(s) 236, 461, 469
HhaI GCGC 1 cut(s) 1076
Hin6I GCGC 1 cut(s) 1074
HinP1I GCGC 1 cut(s) 1074
HinfI GANTC 1 cut(s) 673
HpaII CCGG 3 cut(s) 646, 961, 1179
HphI GGTGA 5 cut(s) 100, 121, 181, 328, 434
Hpy166II GTNNAC 3 cut(s) 189, 241, 758
Hpy188I TCNGA 6 cut(s) 252, 272, 678, 789, 830, 842
Hpy188III TCNNGA 6 cut(s) 476, 551, 580, 961, 1147, 1179
Hpy8I GTNNAC 3 cut(s) 189, 241, 758
Hpy99I CGWCG 4 cut(s) 252, 407, 463, 574
HpyAV CCTTC 2 cut(s) 310, 390
HpyCH4III ACNGT 2 cut(s) 617, 664
HpyCH4IV ACGT 2 cut(s) 585, 777
HpyCH4V TGCA 9 cut(s) 14, 117, 367, 376, 500, 565, 667, 902, 1094
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 287, 373, 376, 469, 562, 937, 1007, 1100
HpyF3I CTNAG 2 cut(s) 558, 656
HpySE526I ACGT 2 cut(s) 585, 777
HspAI GCGC 1 cut(s) 1074
Kpn2I TCCGGA 2 cut(s) 960, 1178
KroI GCCGGC 1 cut(s) 645
KroNI GCCGGC 1 cut(s) 647
Ksp22I TGATCA 1 cut(s) 1014
KspI CCGCGG 1 cut(s) 263
Kzo9I GATC 4 cut(s) 30, 267, 789, 1014
LmnI GCTCC 2 cut(s) 137, 553
Lsp1109I GCAGC 3 cut(s) 379, 388, 472
LweI GCATC 2 cut(s) 552, 658
MaeI CTAG 1 cut(s) 1200
MaeII ACGT 2 cut(s) 585, 777
MaeIII GTNAC 2 cut(s) 341, 797
MalI GATC 4 cut(s) 32, 269, 791, 1016
MboI GATC 4 cut(s) 30, 267, 789, 1014
MboII GAAGA 2 cut(s) 750, 1174
MluCI AATT 6 cut(s) 18, 78, 450, 465, 1142, 1150
MmeI TCCRAC 2 cut(s) 230, 599
MnlI CCTC 8 cut(s) 49, 52, 55, 67, 381, 388, 535, 720
MroI TCCGGA 2 cut(s) 960, 1178
MroNI GCCGGC 1 cut(s) 645
MroXI GAANNNNTTC 1 cut(s) 1028
MseI TTAA 2 cut(s) 17, 935
MslI CAYNNNNRTG 1 cut(s) 220
MspA1I CMGCKG 1 cut(s) 262
MspI CCGG 3 cut(s) 646, 961, 1179
MspR9I CCNGG 3 cut(s) 232, 277, 1066
MvaI CCWGG 3 cut(s) 232, 277, 1066
MvnI CGCG 2 cut(s) 247, 262
MwoI GCNNNNNNNGC 9 cut(s) 59, 287, 373, 376, 469, 562, 937, 1007, 1100
NaeI GCCGGC 1 cut(s) 647
NcoI CCATGG 1 cut(s) 1033
NdeII GATC 4 cut(s) 30, 267, 789, 1014
NgoMIV GCCGGC 1 cut(s) 645
NlaIV GGNNCC 3 cut(s) 274, 555, 1087
NmeAIII GCCGAG 2 cut(s) 126, 786
NmuCI GTSAC 1 cut(s) 341
NspI RCATGY 3 cut(s) 448, 848, 979
PagI TCATGA 1 cut(s) 1146
PciI ACATGT 2 cut(s) 444, 975
PcsI WCGNNNNNNNCGW 1 cut(s) 399
PdiI GCCGGC 1 cut(s) 647
PdmI GAANNNNTTC 1 cut(s) 1028
PfeI GAWTC 1 cut(s) 673
Pfl23II CGTACG 1 cut(s) 489
PflMI CCANNNNNTGG 1 cut(s) 586
PkrI GCNGC 4 cut(s) 261, 369, 378, 487
PscI ACATGT 2 cut(s) 444, 975
PshBI ATTAAT 1 cut(s) 17
Psp6I CCWGG 3 cut(s) 230, 275, 1064
PspFI CCCAGC 1 cut(s) 352
PspGI CCWGG 3 cut(s) 230, 275, 1064
PspLI CGTACG 1 cut(s) 489
PspN4I GGNNCC 3 cut(s) 274, 555, 1087
PspPI GGNCC 1 cut(s) 279
PstI CTGCAG 1 cut(s) 378
PstNI CAGNNNCTG 1 cut(s) 373
RsaI GTAC 7 cut(s) 5, 491, 614, 731, 757, 980, 1197
RsaNI GTAC 7 cut(s) 4, 490, 613, 730, 756, 979, 1196
RseI CAYNNNNRTG 1 cut(s) 220
SacII CCGCGG 1 cut(s) 263
SaqAI TTAA 2 cut(s) 17, 935
SatI GCNGC 4 cut(s) 260, 368, 377, 486
Sau3AI GATC 4 cut(s) 30, 267, 789, 1014
Sau96I GGNCC 1 cut(s) 279
ScrFI CCNGG 3 cut(s) 232, 277, 1066
SfaNI GCATC 2 cut(s) 552, 658
SfcI CTRYAG 1 cut(s) 374
Sfr303I CCGCGG 1 cut(s) 263
SgrBI CCGCGG 1 cut(s) 263
SmiMI CAYNNNNRTG 1 cut(s) 220
SmlI CTYRAG 1 cut(s) 733
SmoI CTYRAG 1 cut(s) 733
Sse9I AATT 6 cut(s) 18, 78, 450, 465, 1142, 1150
SsiI CCGC 3 cut(s) 245, 260, 262
SspI AATATT 2 cut(s) 682, 880
SspMI CTAG 1 cut(s) 1200
StyD4I CCNGG 3 cut(s) 230, 275, 1064
StyI CCWWGG 2 cut(s) 132, 1033
TaaI ACNGT 2 cut(s) 617, 664
TaiI ACGT 2 cut(s) 588, 780
TaqI TCGA 1 cut(s) 393
TasI AATT 6 cut(s) 18, 78, 450, 465, 1142, 1150
TatI WGTACW 3 cut(s) 3, 612, 755
TauI GCSGC 1 cut(s) 262
TfiI GAWTC 1 cut(s) 673
Tru1I TTAA 2 cut(s) 17, 935
Tru9I TTAA 2 cut(s) 17, 935
TscAI CASTG 2 cut(s) 346, 1101
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 3 cut(s) 367, 376, 485
Tsp45I GTSAC 1 cut(s) 341
TspDTI ATGAA 7 cut(s) 116, 546, 740, 883, 1135, 1163, 1175
TspRI CASTG 2 cut(s) 346, 1101
Van91I CCANNNNNTGG 1 cut(s) 586
VspI ATTAAT 1 cut(s) 17
XapI RAATTY 3 cut(s) 78, 1142, 1150
XceI RCATGY 3 cut(s) 448, 848, 979
XcmI CCANNNNNNNNNTGG 1 cut(s) 1062
XmnI GAANNNNTTC 1 cut(s) 1028
XspI CTAG 1 cut(s) 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.