MD11G1147800.v1.1

Protein UPSTREAM OF FLC isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0006878
Physical Location & Seq
Forward (+)
13934069 .. 13938291
4223 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1147800.v1.1.491

Sequence Viewer

Length: 1908 bp
ATGCGGGCGTCCATTTCCACTTCCTCCATTTTTGATCAGCTTCTTCTCTTTGTTTCTTTCTGTCTGTGTTTTCTTGTCTCGTTGTCTCTCCCATTCTCATATACCAAATTTAGATTCCTGATTGGTTTCAAGGGTTCCAACTCTCTCACACTACCTCTTCTATCCGATTTACTCCACCGTTCAAAAACCCACAATTTGTTTTTCTGCGGTTTTCTGACTGATCTGAGCCGCAAATCCGCCATACTGGGTTTTGCAGGTTTTGGTGACGACCCAGAAGCCAAAAGCTTTAATTTTTTTCAGAAAACGAAGGAAGCAATGGAGGGTAGGATGAAGAAGTATAGCCAAGTGAGTCCGGAGAGGGCGAAAGTGTGGACTGAGAAGTCGCCCAGGTACCATCAGAACCGCAAAGTTCCTGTGGTTTACTATCTCTCTCGAAATCGGCAGCTTGAACACCCCCATTTCATGGAGGTTCCTGTAACCTCTCCCCAGGGGCTCTACCTCAGAGATGTGATTAATAGGCTTAATGCTCTGAGGGGCAGAGGCATGGCTACCATGTATTCATGGTCTTCTAAGAGAAGCTATAAGGGTGGATATGTCTGGCATGATCTCTCTGAAGATGATCTGATTCCTCCGGCCCATGGAAATGAGTACGTACTCAAAGGTTCTGAGCTTTTTGAAGAATCGAATTCAGGTCGGTTTAGCCCGTTGGCAGAAATAAAAATCCAGAGCTTGAAACAATTACCGGAACCAGCATCTTCTAGAAGCCAAGATGATTCTTCATCGTCGTCAAGTTTGAATGGGAAGGAAACAAAGCTTTCTCAAGAATATGAGCTCTCTCCTCTGGTTCAACATCCCGAAGGCTCTTCCAGTGCATCTCCAGAGTCTACGGTTGGAAAGAATTCTTCGTGGGGCGGTTCACTCAGCTTGACAGAGTACAAGGTTTACAAGAGTGATGGTTTGGCTGATGCTTCTACACAGACTGAAGAAAATGGGAACAAACCTAAAGCATCAGAAACATGTACAAGGGGTGTTTCCACAGATGATGGATCATTAGAACCGGATTGCAGTTATTATCATAATCGAGTGCTGTGTGTGAAAGAGAACTCTGAGATTTGCAGTGATTCAGTTTCCCCTCCTCGGTCTTCCCCCAGCCCATCTTCATCAGGTGGGAAGACTGAAACTTTGGAATCCCTTATTAGGGCTGATGTTAGTAAACTCAATAGTTTTAGAATAGTTGAAGGGGAAGACGTACGGATGCAAAACAATCCAAGGGTTAAGGCTACTAATGTACTTATGCAACTCATCTCGTGTGGTTCAATATCAGTGAAGGATCACAGTTTTGGTCTTATTCCAACCTACAAGGCCCGGTTTTCCCATTCCAATTTTCGCTCCCCATTATTCTCCACTAAAGTAATGCTGGGAGAGCTGGACTGCCTATCAGAGAATCCAAGGCTAATGGGTTTGAGATTGGAAGATAAAGAATATTTTAGTGGGAGCTTGATTGAGACTAAAATGCTCAAGGAGGAAGATGGACGTACAGCTTTAAAACGATCATCTTCATACAATGCTGACAGAAGTTGTAAGAAGCTGGATTCAGTAGAGGACAAAGAGGAGTCTACATCAGGACGTTCGAAATGCATTCCAAGATCAATCAAAGCTTCACTGAACAAGCATCCACGAAGTGAATCTATGAGATTCCCCATTTCCGATAAGCCAAGGAACTCCTCAGATAGAGTTGATGGTGCACATATCAATACCCACAGCGTATCCAATGGAGGTAGCAAAAGAATCACAGACCCTTCATCTCTTAAAAAGCAATCGAAAAGGTTAGATTCGTTTAGAGAAGAGAAGGAGAAGGAGAAGGTGATCAAAATCGAAGAAAGCTTGCTTCTGGAGCTCGGGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF966

Protein Analysis

636

Amino Acids

70.97

Weight (kDa)

8.91

Isoelectric Point (pI)

53.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SOK PF06136 137 - 225 3.5e-49 SOSEKI protein DIX-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1906
AasI GACNNNNNNGTC 1 cut(s) 379
Acc36I ACCTGC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 390
AccB1I GGYRCC 1 cut(s) 390
AccB7I CCANNNNNTGG 1 cut(s) 463
AccI GTMKAC 2 cut(s) 884, 1616
AccIII TCCGGA 1 cut(s) 352
AciI CCGC 6 cut(s) 4, 207, 229, 237, 403, 912
AclWI GGATC 2 cut(s) 1054, 1338
AcsI RAATTY 3 cut(s) 107, 685, 898
AcuI CTGAAG 2 cut(s) 633, 1002
AcyI GRCGYC 1 cut(s) 8
AdeI CACNNNGTG 1 cut(s) 1682
AfaI GTAC 8 cut(s) 392, 650, 654, 935, 1021, 1251, 1290, 1537
AfiI CCNNNNNNNGG 5 cut(s) 463, 638, 1137, 1197, 1198
AflIII ACRYGT 1 cut(s) 1016
AgsI TTSAA 9 cut(s) 130, 183, 449, 677, 733, 796, 848, 1238, 1317
AjnI CCWGG 2 cut(s) 386, 486
AjuI GAANNNNNNNTTGG 2 cut(s) 98, 130
Alw21I GWGCWC 3 cut(s) 834, 1747, 1899
Alw26I GTCTC 3 cut(s) 82, 90, 1499
Alw44I GTGCAC 1 cut(s) 1743
AlwI GGATC 2 cut(s) 1054, 1338
Ama87I CYCGRG 1 cut(s) 1898
Aor13HI TCCGGA 1 cut(s) 352
AoxI GGCC 2 cut(s) 633, 1362
ApaLI GTGCAC 1 cut(s) 1743
ApeKI GCWGC 1 cut(s) 442
ApoI RAATTY 3 cut(s) 107, 685, 898
ArsI GACNNNNNNTTYG 2 cut(s) 1165, 1197
AseI ATTAAT 1 cut(s) 513
Asp700I GAANNNNTTC 1 cut(s) 898
Asp718I GGTACC 1 cut(s) 390
AspS9I GGNCC 2 cut(s) 634, 1363
AsuC2I CCSGG 1 cut(s) 1366
AsuHPI GGTGA 2 cut(s) 275, 1876
AsuII TTCGAA 1 cut(s) 1631
AvaI CYCGRG 1 cut(s) 1898
BaeGI GKGCMC 1 cut(s) 1747
BanI GGYRCC 1 cut(s) 390
BanII GRGCYC 3 cut(s) 495, 834, 1899
BauI CACGAG 1 cut(s) 1306
BbsI GAAGAC 4 cut(s) 558, 1134, 1178, 1251
Bbv12I GWGCWC 3 cut(s) 834, 1747, 1899
BbvI GCAGC 1 cut(s) 454
BccI CCATC 6 cut(s) 402, 947, 1037, 1162, 1523, 1733
BciT130I CCWGG 2 cut(s) 388, 488
BciVI GTATCC 1 cut(s) 1777
BclI TGATCA 2 cut(s) 34, 1866
BcnI CCSGG 1 cut(s) 1366
BcoDI GTCTC 3 cut(s) 82, 90, 1499
BfaI CTAG 1 cut(s) 759
BfuAI ACCTGC 1 cut(s) 245
BfuI GTATCC 1 cut(s) 1777
BisI GCNGC 2 cut(s) 229, 443
BlsI GCNGC 2 cut(s) 230, 444
Bme1390I CCNGG 3 cut(s) 388, 488, 1366
BmeT110I CYCGRG 1 cut(s) 1898
BmgT120I GGNCC 2 cut(s) 634, 1363
BmiI GGNNCC 4 cut(s) 136, 392, 471, 747
BmrFI CCNGG 3 cut(s) 388, 488, 1366
BmrI ACTGGG 1 cut(s) 254
BmsI GCATC 6 cut(s) 761, 881, 955, 1016, 1245, 1681
BmuI ACTGGG 1 cut(s) 254
BpiI GAAGAC 4 cut(s) 558, 1134, 1178, 1251
BpmI CTGGAG 1 cut(s) 861
Bpu14I TTCGAA 1 cut(s) 1631
BpuEI CTTGAG 2 cut(s) 804, 1502
BpuMI CCSGG 1 cut(s) 1366
BsaAI YACGTR 1 cut(s) 652
BsaBI GATNNNNATC 1 cut(s) 1871
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 8 cut(s) 386, 486, 487, 637, 1136, 1268, 1448, 1715
BsaWI WCCGGW 3 cut(s) 352, 742, 1057
BsaXI ACNNNNNCTCC 1 cut(s) 1886
Bsc4I CCNNNNNNNGG 5 cut(s) 463, 638, 1137, 1197, 1198
Bse1I ACTGG 2 cut(s) 249, 867
Bse3DI GCAATG 1 cut(s) 321
Bse8I GATNNNNATC 1 cut(s) 1871
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 2 cut(s) 388, 488
BseDI CCNNGG 8 cut(s) 386, 486, 487, 637, 1136, 1268, 1448, 1715
BseGI GGATG 4 cut(s) 333, 850, 1260, 1672
BseJI GATNNNNATC 1 cut(s) 1871
BseLI CCNNNNNNNGG 5 cut(s) 463, 638, 1137, 1197, 1198
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 8 cut(s) 215, 366, 514, 521, 657, 934, 1098, 1740
BseNI ACTGG 2 cut(s) 249, 867
BseRI GAGGAG 4 cut(s) 828, 1125, 1625, 1714
BseSI GKGCMC 1 cut(s) 1747
BseXI GCAGC 1 cut(s) 454
BseYI CCCAGC 2 cut(s) 1148, 1417
BshFI GGCC 2 cut(s) 635, 1364
BshNI GGYRCC 1 cut(s) 390
BsiHKAI GWGCWC 3 cut(s) 834, 1747, 1899
BsiHKCI CYCGRG 1 cut(s) 1898
BsiSI CCGG 5 cut(s) 353, 632, 743, 1058, 1366
BsiWI CGTACG 1 cut(s) 1249
BslI CCNNNNNNNGG 5 cut(s) 463, 638, 1137, 1197, 1198
BsmAI GTCTC 3 cut(s) 82, 90, 1499
BsmI GAATGC 1 cut(s) 1638
BsnI GGCC 2 cut(s) 635, 1364
BsoBI CYCGRG 1 cut(s) 1898
Bsp119I TTCGAA 1 cut(s) 1631
Bsp1286I GDGCHC 4 cut(s) 495, 834, 1747, 1899
Bsp13I TCCGGA 1 cut(s) 352
Bsp1407I TGTACA 1 cut(s) 1019
Bsp143I GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
Bsp19I CCATGG 1 cut(s) 637
BspACI CCGC 6 cut(s) 4, 207, 229, 237, 403, 912
BspANI GGCC 2 cut(s) 635, 1364
BspCNI CTCAG 8 cut(s) 216, 367, 513, 522, 658, 933, 1099, 1739
BspEI TCCGGA 1 cut(s) 352
BspLI GGNNCC 4 cut(s) 136, 392, 471, 747
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 2 cut(s) 1054, 1338
BspQI GCTCTTC 1 cut(s) 868
BspT104I TTCGAA 1 cut(s) 1631
BspT107I GGYRCC 1 cut(s) 390
BsrDI GCAATG 1 cut(s) 321
BsrGI TGTACA 1 cut(s) 1019
BsrI ACTGG 2 cut(s) 249, 867
BssECI CCNNGG 8 cut(s) 386, 486, 487, 637, 1136, 1268, 1448, 1715
BssMI GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
BssNI GRCGYC 1 cut(s) 8
BssSI CACGAG 1 cut(s) 1306
BssT1I CCWWGG 4 cut(s) 637, 1268, 1448, 1715
Bst2BI CACGAG 1 cut(s) 1306
Bst2UI CCWGG 2 cut(s) 388, 488
Bst4CI ACNGT 3 cut(s) 179, 889, 1337
Bst6I CTCTTC 3 cut(s) 162, 868, 1839
BstACI GRCGYC 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 1019
BstBAI YACGTR 1 cut(s) 652
BstBI TTCGAA 1 cut(s) 1631
BstC8I GCNNGC 2 cut(s) 6, 1886
BstDEI CTNAG 9 cut(s) 224, 375, 500, 530, 570, 666, 920, 1107, 1726
BstDSI CCRYGG 1 cut(s) 637
BstF5I GGATG 4 cut(s) 333, 850, 1260, 1672
BstKTI GATC 9 cut(s) 37, 223, 607, 622, 1049, 1333, 1553, 1649, 1869
BstMAI GTCTC 3 cut(s) 82, 90, 1499
BstMBI GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
BstMWI GCNNNNNNNGC 2 cut(s) 1423, 1894
BstNI CCWGG 2 cut(s) 388, 488
BstNSI RCATGY 1 cut(s) 1020
BstSCI CCNGG 3 cut(s) 386, 486, 1364
BstSLI GKGCMC 1 cut(s) 1747
BstSNI TACGTA 1 cut(s) 652
BstV1I GCAGC 1 cut(s) 454
BstV2I GAAGAC 4 cut(s) 558, 1134, 1178, 1251
BsuI GTATCC 1 cut(s) 1777
BsuRI GGCC 2 cut(s) 635, 1364
BtgI CCRYGG 1 cut(s) 637
BtsCI GGATG 4 cut(s) 333, 850, 1260, 1672
BtsI GCAGTG 1 cut(s) 1123
BtsIMutI CAGTG 4 cut(s) 874, 1123, 1329, 1661
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 2 cut(s) 6, 1886
Cfr13I GGNCC 2 cut(s) 634, 1363
Csp6I GTAC 8 cut(s) 391, 649, 653, 934, 1020, 1250, 1289, 1536
CviAII CATG 7 cut(s) 463, 544, 553, 561, 602, 638, 1017
CviQI GTAC 8 cut(s) 391, 649, 653, 934, 1020, 1250, 1289, 1536
DdeI CTNAG 9 cut(s) 224, 375, 500, 530, 570, 666, 920, 1107, 1726
DpnI GATC 9 cut(s) 36, 222, 606, 621, 1048, 1332, 1552, 1648, 1868
DpnII GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
DraI TTTAAA 1 cut(s) 1545
DraIII CACNNNGTG 1 cut(s) 1682
DrdI GACNNNNNNGTC 1 cut(s) 379
DseDI GACNNNNNNGTC 1 cut(s) 379
Eam1104I CTCTTC 3 cut(s) 162, 868, 1839
EarI CTCTTC 3 cut(s) 162, 868, 1839
EciI GGCGGA 1 cut(s) 226
Ecl136II GAGCTC 2 cut(s) 832, 1897
Eco105I TACGTA 1 cut(s) 652
Eco130I CCWWGG 4 cut(s) 637, 1268, 1448, 1715
Eco24I GRGCYC 3 cut(s) 495, 834, 1899
Eco53kI GAGCTC 2 cut(s) 832, 1897
Eco57I CTGAAG 2 cut(s) 633, 1002
Eco88I CYCGRG 1 cut(s) 1898
EcoICRI GAGCTC 2 cut(s) 832, 1897
EcoRI GAATTC 2 cut(s) 685, 898
EcoRII CCWGG 2 cut(s) 386, 486
EcoT14I CCWWGG 4 cut(s) 637, 1268, 1448, 1715
EcoT22I ATGCAT 1 cut(s) 1640
EcoT38I GRGCYC 3 cut(s) 495, 834, 1899
ErhI CCWWGG 4 cut(s) 637, 1268, 1448, 1715
FaeI CATG 7 cut(s) 466, 547, 556, 564, 605, 641, 1020
FatI CATG 7 cut(s) 462, 543, 552, 560, 601, 637, 1016
FbaI TGATCA 2 cut(s) 34, 1866
FblI GTMKAC 2 cut(s) 884, 1616
Fnu4HI GCNGC 2 cut(s) 229, 443
FokI GGATG 4 cut(s) 340, 837, 1267, 1659
FriOI GRGCYC 3 cut(s) 495, 834, 1899
Fsp4HI GCNGC 2 cut(s) 229, 443
FspBI CTAG 1 cut(s) 759
GluI GCNGC 2 cut(s) 229, 443
GsaI CCCAGC 2 cut(s) 1152, 1421
GsuI CTGGAG 1 cut(s) 861
HaeIII GGCC 2 cut(s) 635, 1364
HapII CCGG 5 cut(s) 353, 632, 743, 1058, 1366
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 7 cut(s) 466, 547, 556, 564, 605, 641, 1020
HindIII AAGCTT 4 cut(s) 283, 812, 1656, 1882
HpaII CCGG 5 cut(s) 353, 632, 743, 1058, 1366
HphI GGTGA 2 cut(s) 275, 1876
Hpy166II GTNNAC 8 cut(s) 372, 421, 885, 917, 943, 1214, 1617, 1745
Hpy8I GTNNAC 8 cut(s) 372, 421, 885, 917, 943, 1214, 1617, 1745
Hpy99I CGWCG 1 cut(s) 787
HpyAV CCTTC 9 cut(s) 301, 796, 851, 1232, 1321, 1809, 1843, 1849, 1855
HpyCH4III ACNGT 3 cut(s) 179, 889, 1337
HpyCH4IV ACGT 4 cut(s) 651, 1248, 1534, 1627
HpyCH4V TGCA 8 cut(s) 254, 872, 1065, 1116, 1258, 1297, 1638, 1745
HpyF10VI GCNNNNNNNGC 2 cut(s) 1423, 1894
HpyF3I CTNAG 9 cut(s) 224, 375, 500, 530, 570, 666, 920, 1107, 1726
HpySE526I ACGT 4 cut(s) 651, 1248, 1534, 1627
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 7 cut(s) 466, 547, 556, 564, 605, 641, 1020
Kpn2I TCCGGA 1 cut(s) 352
KpnI GGTACC 1 cut(s) 394
Ksp22I TGATCA 2 cut(s) 34, 1866
Kzo9I GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
LguI GCTCTTC 1 cut(s) 868
LmnI GCTCC 3 cut(s) 1394, 1494, 1894
Lsp1109I GCAGC 1 cut(s) 454
LweI GCATC 6 cut(s) 761, 881, 955, 1016, 1245, 1681
MaeI CTAG 1 cut(s) 759
MaeII ACGT 4 cut(s) 651, 1248, 1534, 1627
MaeIII GTNAC 2 cut(s) 263, 475
MalI GATC 9 cut(s) 36, 222, 606, 621, 1048, 1332, 1552, 1648, 1868
MboI GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
MhlI GDGCHC 4 cut(s) 495, 834, 1747, 1899
MluCI AATT 7 cut(s) 107, 193, 289, 685, 737, 898, 1381
MlyI GAGTC 3 cut(s) 358, 890, 1622
MmeI TCCRAC 3 cut(s) 162, 871, 1376
Mph1103I ATGCAT 1 cut(s) 1640
MroI TCCGGA 1 cut(s) 352
MroXI GAANNNNTTC 1 cut(s) 898
MseI TTAA 6 cut(s) 288, 513, 522, 1275, 1544, 1809
MslI CAYNNNNRTG 1 cut(s) 642
MspI CCGG 5 cut(s) 353, 632, 743, 1058, 1366
MspR9I CCNGG 3 cut(s) 388, 488, 1366
Mva1269I GAATGC 1 cut(s) 1638
MvaI CCWGG 2 cut(s) 388, 488
MwoI GCNNNNNNNGC 2 cut(s) 1423, 1894
NciI CCSGG 1 cut(s) 1366
NcoI CCATGG 1 cut(s) 637
NdeII GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
NlaIII CATG 7 cut(s) 466, 547, 556, 564, 605, 641, 1020
NlaIV GGNNCC 4 cut(s) 136, 392, 471, 747
NmuCI GTSAC 1 cut(s) 263
NsiI ATGCAT 1 cut(s) 1640
NspI RCATGY 1 cut(s) 1020
NspV TTCGAA 1 cut(s) 1631
PasI CCCWGGG 1 cut(s) 487
PciI ACATGT 1 cut(s) 1016
PciSI GCTCTTC 1 cut(s) 868
PctI GAATGC 1 cut(s) 1638
PdmI GAANNNNTTC 1 cut(s) 898
Pfl23II CGTACG 1 cut(s) 1249
PflMI CCANNNNNTGG 1 cut(s) 463
PkrI GCNGC 2 cut(s) 230, 444
PleI GAGTC 3 cut(s) 357, 889, 1621
PpsI GAGTC 3 cut(s) 357, 889, 1621
Ppu21I YACGTR 1 cut(s) 652
PscI ACATGT 1 cut(s) 1016
PshBI ATTAAT 1 cut(s) 513
PsiI TTATAA 1 cut(s) 1906
Psp124BI GAGCTC 2 cut(s) 834, 1899
Psp6I CCWGG 2 cut(s) 386, 486
PspFI CCCAGC 2 cut(s) 1148, 1417
PspGI CCWGG 2 cut(s) 386, 486
PspLI CGTACG 1 cut(s) 1249
PspN4I GGNNCC 4 cut(s) 136, 392, 471, 747
PspPI GGNCC 2 cut(s) 634, 1363
RsaI GTAC 8 cut(s) 392, 650, 654, 935, 1021, 1251, 1290, 1537
RsaNI GTAC 8 cut(s) 391, 649, 653, 934, 1020, 1250, 1289, 1536
RseI CAYNNNNRTG 1 cut(s) 642
SacI GAGCTC 2 cut(s) 834, 1899
SapI GCTCTTC 1 cut(s) 868
SaqAI TTAA 6 cut(s) 288, 513, 522, 1275, 1544, 1809
SatI GCNGC 2 cut(s) 229, 443
Sau3AI GATC 9 cut(s) 34, 220, 604, 619, 1046, 1330, 1550, 1646, 1866
Sau96I GGNCC 2 cut(s) 634, 1363
SchI GAGTC 3 cut(s) 358, 890, 1622
ScrFI CCNGG 3 cut(s) 388, 488, 1366
SduI GDGCHC 4 cut(s) 495, 834, 1747, 1899
SfaNI GCATC 6 cut(s) 761, 881, 955, 1016, 1245, 1681
SfuI TTCGAA 1 cut(s) 1631
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 2 cut(s) 819, 1517
SmoI CTYRAG 2 cut(s) 819, 1517
SnaBI TACGTA 1 cut(s) 652
Sse9I AATT 7 cut(s) 107, 193, 289, 685, 737, 898, 1381
SsiI CCGC 6 cut(s) 4, 207, 229, 237, 403, 912
SspI AATATT 1 cut(s) 1484
SspMI CTAG 1 cut(s) 759
SstI GAGCTC 2 cut(s) 834, 1899
StyD4I CCNGG 3 cut(s) 386, 486, 1364
StyI CCWWGG 4 cut(s) 637, 1268, 1448, 1715
TaaI ACNGT 3 cut(s) 179, 889, 1337
TaiI ACGT 4 cut(s) 654, 1251, 1537, 1630
TaqI TCGA 6 cut(s) 433, 683, 1081, 1631, 1820, 1875
TaqII GACCGA 1 cut(s) 1128
TasI AATT 7 cut(s) 107, 193, 289, 685, 737, 898, 1381
TatI WGTACW 3 cut(s) 933, 1019, 1288
TauI GCSGC 1 cut(s) 231
Tru1I TTAA 6 cut(s) 288, 513, 522, 1275, 1544, 1809
Tru9I TTAA 6 cut(s) 288, 513, 522, 1275, 1544, 1809
TscAI CASTG 4 cut(s) 874, 1123, 1329, 1668
TseFI GTSAC 1 cut(s) 263
TseI GCWGC 1 cut(s) 442
Tsp45I GTSAC 1 cut(s) 263
TspDTI ATGAA 7 cut(s) 344, 451, 549, 768, 1149, 1548, 1791
TspGWI ACGGA 1 cut(s) 1267
TspRI CASTG 4 cut(s) 874, 1123, 1329, 1668
Van91I CCANNNNNTGG 1 cut(s) 463
VneI GTGCAC 1 cut(s) 1743
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 3 cut(s) 107, 685, 898
XbaI TCTAGA 1 cut(s) 758
XceI RCATGY 1 cut(s) 1020
XmiI GTMKAC 2 cut(s) 884, 1616
XmnI GAANNNNTTC 1 cut(s) 898
XspI CTAG 1 cut(s) 759
Zsp2I ATGCAT 1 cut(s) 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.