MD11G1293800.v1.1

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0006636
Physical Location & Seq
Forward (+)
41296893 .. 41302687
5795 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1293800.v1.1.491

Sequence Viewer

Length: 2982 bp
ATGAAGAAGAGTAAGGGGAAGAACAATGGCTTGTTGCCGAACTCGCTTAGGATTATTTCGTCGTGCCTTAAAACTGTGTCGACGAATGCGAGCACCGTCGCTTCTACTGTTCGCTCTGCCGGTGCGTCTGTAGCTGCTTCGATTTCTGCTTCCGAGGATCAGAAGGATCAGGTAACCTGGGCTGGCTTTGACAGGCTAGAGTTTAGTCAGTCTACCTTCAAGCATGTTCTCTTACTTGGTTATCAAAATGGGTTTCAAGTTTTCGATATGGAGGATGCCTCTAATTTCAGTGAACTAGTTTCAAAGCGTGATGGCTCGGTTTCATTCTTACAGATGCAGCCCTTTCCTGCTGCATCTGATGGTAACCAAGGGTTCAGAACGACACATCCTTTGCTGCTGGTTGTTGCTGGAGATGACACTACTGGTGCGGGAACTGTTCATAGTACTAGCTACTTGGGAGTGGCAGGCAGAGATGGTAATTTGGAGTCTCGGCCAGGGAACCCTGTCAGCTCTCCTACAGCTGTTCGGTTTTACTCTATTAGGTCCCAAGGTTATGTACATGTTCTGAGGTTTCGGTCAGCTGTGTGTATGATTAGATGCAGTCCTCGGATTGTAGCTGTGGGTCTTGCAACTCAAATTTACTGTTTTGATGCGCTCACCCTCGAAAACAGATTCAGTGTTCTTACCTATCCTGTTCCTCAGCTAGCAGGGCAAGGATCAAATGGGTTTAATGTTGGTTACGGCCCAATGGCTGTGGGTCCAAGGTGGTTAGCCTATGCTTCCAACAGCCCTCTAGCGTCAAACGCAAGTCGCTTAGGCCCCCAAAACCTAACTCCTTCCCCAGGAGTTAGTCCATCTACATCACCTGGCAATGGTAGTTATGTGGCTCGTTATGCAATGGAGTCTAGTAAACAGTTGGCTGCTGGAATAATTAACCTGGGTGACATGGGATGCAAAACCTTGTATAAATACTGTCAAGAGATGCTCCCTGATGGATCTAACTCTCCAATATCGTCAAATTCAGGCTGGAAAGTTAGCAGGCATGCAGGCACAGAAATGGATAATGCAGGGATGGTTGTTGTCAAAGATTTTGTTACCCGAGCTGTTATATCACAGTTTAAGGCTCATACTAGTCCAATATCTGCGCTGTGTTTCGATCCTAGTGGGACCCTTCTGGTTACTGCCTCAGTGTATGGAAATAATATTAACATTTTCCGGATAATGCCTTCATGTAAACGCACTGGATCAGGTGGTCAAAACTTCGATTGGAGCACTTCTCATGTGCATCTTTACAAACTGCATCGTGGAATAACATCAGCTATGATCCAGGACATTTGCTTTAGTCATTACAGTCAGTGGGTTGCAATTGTTTCATCCAAGGGGACCTGCCATGTTTTTGTTTTATCCCCTTTTGGTGGCGATGCTGGATTTCGGCTTCTTAATAGTCACGGTGAAGAACCCTCCCTGTGTCCAGTTTTATCTCTACCTTGGTGGTCTGCTTCTTCTTGTGTCATTAATCAGCAATCTTTTCCACCGCCACCATCCGTTGCTCTTTCTGTGGTGAGCAGGATAAAGTACAGTAGTTTTGGATGGCTTAGCACAGCCAACAATGCCACTGCTTCAGCGACAGGGAAGGTCTTTGTGCCATCTGGTGCTGTTGCTGCAGTTTTCCATAATTCCTTATCTCAAAGTGTTCAGCACAGTAACTCAAGGACCAGTACCTTGGAACATCTATTAGTTTATACTCCGTCAGGTCATGTAGTTCAACATGAACTTCAGCCAAGGATAGGGGTAGAACAGAGTCATAGCGGTCTAAGTACCCAGGCAGCCACGTCTATGTATATTCAGGACGAAGAGCTGAGAGTGAAAGTTGAACCCATTCAATGGTGGGATGTATGTAGGCGGTCAGACTGGCAGGAAAGAGAGGACAGTAGTCTTGGTACCACATTCGATAGACAAGAGGTGGCTGGCATTCTTCAGAACAAATCAGGTTCTGATGGTATTCATGGAATGGAATCTCTAGACTTAAATGGTGCTGTTGGGGGGAAAAGGAGACCGGAAACTTATTCTGGGAAGGTCCATGATGGGTCCCACTGGTACCTCTCTAATGCAGAGGTGCAGATCAGTTCTTTGAGATTACCAATATGGCAAAAGTCTACGATTTGTTTTTACACGATGGGCGATCCAAGAGCTGATAGTTTCACTGGTGGAGAGTTTGAAATTGAAAAGGTCCCTGTTTTCGAGCAGTTCCATTCCATCAAATCAAGCTGGGATGACAGAGGCCTTGCTGGTGGGAGGTATCCCAGTCATACTTCGCCGCCTCATCAAGCTGAAAACAAGATCTTGGAAGAGACTGTTATATGTCACTCGAAGCCTGCATCGCTTAGCTCCACTGAAAGCTCAGATGGGGGTTCGTCAAGAAGAATTGAGCATTTTGTTGACTTCGATCAAATAAACAATGAGAAGCCCCGCACAACAGTTTATCAGACCTTGAATGGCTCGGAAAGAAGGGCCAATACAATTGTTGAGCCTTCATTAGAAAACCATATCTCTTTCAGCATTCTGTGTACTCCATCTGAACATTTTAAGAACATCAATTCTCAAATCAACAGCTGTGTCACCAACGGTTTGCCTGTGTTAGAAAGTACCATGATTCCAGGAGGAAGAGTTTCTGCCGAAGAAGGCCTAGCATTGAAAGCAATTGGGATCAGGGAGGTCTCAGTTTTATACTCTGATCAACATGCTTCGAGTACCGATATTGTTGCAGAGGGGGCTTCCACTTTGCAGCATCCAATAGATCTTTCACAGTTTTTCCAGGAGGAGCATTGTAACGCACTGGAGAAGAACGGATGCAATGGGTTAACTGAAGTCGTAGCCGATGATGTTGACAGCGACAGTAGCCACTGCGATAAGGTGAAACCCGAAAATGAGGAAGATGGTGAAATGCTTGGAGGCATGTTTGCTTTTTCTGATGAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

994

Amino Acids

107.42

Weight (kDa)

6.02

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCAS3_WD40 PF21034 76 - 478 5.6e-32 BCAS3, WD40 repeat
BCAS3 PF12490 615 - 746 1.2e-35 BCAS3 microtubule associated cell migration factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1394
Acc65I GGTACC 2 cut(s) 1940, 2097
AccB1I GGYRCC 2 cut(s) 1940, 2097
AccB7I CCANNNNNTGG 1 cut(s) 1884
AccI GTMKAC 3 cut(s) 80, 212, 2156
AccIII TCCGGA 1 cut(s) 1215
AciI CCGC 6 cut(s) 428, 1535, 1809, 1903, 2318, 2470
AclWI GGATC 9 cut(s) 165, 174, 724, 1003, 1151, 1252, 1318, 2177, 2714
AcoI YGGCCR 1 cut(s) 491
AcsI RAATTY 2 cut(s) 636, 1018
AcuI CTGAAG 4 cut(s) 1605, 1760, 1961, 2886
AfiI CCNNNNNNNGG 5 cut(s) 842, 872, 1415, 1787, 1884
AflIII ACRYGT 1 cut(s) 559
AhlI ACTAGT 2 cut(s) 295, 1130
AjiI CACGTC 1 cut(s) 1833
AjnI CCWGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
AjuI GAANNNNNNNTTGG 2 cut(s) 2785, 2817
AloI GAACNNNNNNTCC 2 cut(s) 370, 402
Alw21I GWGCWC 2 cut(s) 95, 1274
Alw26I GTCTC 4 cut(s) 492, 2047, 2345, 2722
AlwI GGATC 9 cut(s) 165, 174, 724, 1003, 1151, 1252, 1318, 2177, 2714
AlwNI CAGNNNCTG 1 cut(s) 1994
Ama87I CYCGRG 1 cut(s) 1098
Aor13HI TCCGGA 1 cut(s) 1215
AoxI GGCC 6 cut(s) 491, 742, 817, 2281, 2511, 2683
ApeKI GCWGC 8 cut(s) 134, 337, 350, 394, 920, 1661, 1826, 2785
ApoI RAATTY 2 cut(s) 636, 1018
ArsI GACNNNNNNTTYG 2 cut(s) 373, 405
AseI ATTAAT 1 cut(s) 1515
Asp700I GAANNNNTTC 2 cut(s) 1878, 2668
Asp718I GGTACC 2 cut(s) 1940, 2097
AspLEI GCGC 2 cut(s) 655, 1147
AsuHPI GGTGA 8 cut(s) 649, 855, 953, 1463, 1573, 2611, 2926, 2951
AsuNHI GCTAGC 1 cut(s) 703
AvaI CYCGRG 1 cut(s) 1098
AvaII GGWCC 8 cut(s) 543, 758, 1167, 1383, 1713, 2077, 2088, 2230
BanI GGYRCC 2 cut(s) 1940, 2097
BarI GAAGNNNNNNTAC 2 cut(s) 2500, 2532
Bbv12I GWGCWC 2 cut(s) 95, 1274
BbvCI CCTCAGC 1 cut(s) 699
BbvI GCAGC 8 cut(s) 121, 337, 349, 381, 907, 1648, 1838, 2797
BceAI ACGGC 1 cut(s) 757
BcgI CGANNNNNNTGC 2 cut(s) 2744, 2778
BciT130I CCWGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
BciVI GTATCC 1 cut(s) 2310
BclI TGATCA 1 cut(s) 2734
BcoDI GTCTC 4 cut(s) 492, 2047, 2345, 2722
BcuI ACTAGT 2 cut(s) 295, 1130
BfmI CTRYAG 3 cut(s) 129, 516, 1662
BfuAI ACCTGC 1 cut(s) 1394
BfuI GTATCC 1 cut(s) 2310
BglII AGATCT 2 cut(s) 2340, 2797
BisI GCNGC 9 cut(s) 135, 338, 351, 395, 921, 1662, 1827, 2318, 2786
BlpI GCTNAGC 2 cut(s) 1595, 2384
BlsI GCNGC 9 cut(s) 136, 339, 352, 396, 922, 1663, 1828, 2319, 2787
BmcAI AGTACT 1 cut(s) 445
Bme1390I CCNGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
Bme18I GGWCC 8 cut(s) 543, 758, 1167, 1383, 1713, 2077, 2088, 2230
BmeT110I CYCGRG 1 cut(s) 1098
BmgBI CACGTC 1 cut(s) 1833
BmrFI CCNGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
BmrI ACTGGG 1 cut(s) 2298
BmtI GCTAGC 1 cut(s) 707
BmuI ACTGGG 1 cut(s) 2298
BoxI GACNNNNGTC 1 cut(s) 1932
BplI GAGNNNNNCTC 4 cut(s) 263, 295, 1261, 1293
BpmI CTGGAG 2 cut(s) 429, 2858
Bpu10I CCTNAGC 3 cut(s) 47, 699, 814
Bpu1102I GCTNAGC 2 cut(s) 1595, 2384
BpuEI CTTGAG 1 cut(s) 1693
BsaI GGTCTC 2 cut(s) 2047, 2722
BsaWI WCCGGW 2 cut(s) 1215, 2056
BsaXI ACNNNNNCTCC 2 cut(s) 2652, 2682
Bsc4I CCNNNNNNNGG 5 cut(s) 842, 872, 1415, 1787, 1884
Bse118I RCCGGY 1 cut(s) 119
Bse1I ACTGG 9 cut(s) 427, 1246, 1472, 1716, 1916, 2099, 2209, 2304, 2841
Bse3DI GCAATG 3 cut(s) 877, 903, 2860
BseAI TCCGGA 1 cut(s) 1215
BseBI CCWGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
BseLI CCNNNNNNNGG 5 cut(s) 842, 872, 1415, 1787, 1884
BseMI GCAATG 3 cut(s) 877, 903, 2860
BseMII CTCAG 6 cut(s) 557, 713, 1200, 1850, 2415, 2733
BseNI ACTGG 9 cut(s) 427, 1246, 1472, 1716, 1916, 2099, 2209, 2304, 2841
BseRI GAGGAG 1 cut(s) 2834
BseXI GCAGC 8 cut(s) 121, 337, 349, 381, 907, 1648, 1838, 2797
BseYI CCCAGC 1 cut(s) 2268
BsgI GTGCAG 1 cut(s) 2138
BshFI GGCC 6 cut(s) 493, 744, 819, 2283, 2513, 2685
BshNI GGYRCC 2 cut(s) 1940, 2097
BsiHKAI GWGCWC 2 cut(s) 95, 1274
BsiHKCI CYCGRG 1 cut(s) 1098
BsiSI CCGG 3 cut(s) 120, 1216, 2057
BslFI GGGAC 5 cut(s) 529, 1180, 1396, 2074, 2216
BslI CCNNNNNNNGG 5 cut(s) 842, 872, 1415, 1787, 1884
BsmAI GTCTC 4 cut(s) 492, 2047, 2345, 2722
BsmFI GGGAC 5 cut(s) 529, 1180, 1396, 2074, 2216
BsmI GAATGC 3 cut(s) 91, 1971, 2559
BsnI GGCC 6 cut(s) 493, 744, 819, 2283, 2513, 2685
Bso31I GGTCTC 2 cut(s) 2047, 2722
BsoBI CYCGRG 1 cut(s) 1098
Bsp1286I GDGCHC 2 cut(s) 95, 1274
Bsp13I TCCGGA 1 cut(s) 1215
Bsp1407I TGTACA 1 cut(s) 556
Bsp1720I GCTNAGC 2 cut(s) 1595, 2384
BspACI CCGC 6 cut(s) 428, 1535, 1809, 1903, 2318, 2470
BspANI GGCC 6 cut(s) 493, 744, 819, 2283, 2513, 2685
BspCNI CTCAG 6 cut(s) 558, 712, 1199, 1851, 2414, 2732
BspEI TCCGGA 1 cut(s) 1215
BspMAI CTGCAG 1 cut(s) 1666
BspMI ACCTGC 1 cut(s) 1394
BspOI GCTAGC 1 cut(s) 707
BspPI GGATC 9 cut(s) 165, 174, 724, 1003, 1151, 1252, 1318, 2177, 2714
BspQI GCTCTTC 1 cut(s) 1848
BspT107I GGYRCC 2 cut(s) 1940, 2097
BspTNI GGTCTC 2 cut(s) 2047, 2722
BsrDI GCAATG 3 cut(s) 877, 903, 2860
BsrFI RCCGGY 1 cut(s) 119
BsrGI TGTACA 1 cut(s) 556
BsrI ACTGG 9 cut(s) 427, 1246, 1472, 1716, 1916, 2099, 2209, 2304, 2841
BssAI RCCGGY 1 cut(s) 119
BssT1I CCWWGG 7 cut(s) 367, 547, 761, 1377, 1487, 1722, 1781
Bst2UI CCWGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
Bst6I CTCTTC 4 cut(s) 2, 1848, 2343, 2659
BstAUI TGTACA 1 cut(s) 556
BstC8I GCNNGC 9 cut(s) 91, 184, 466, 705, 1040, 1044, 1048, 1969, 2376
BstEII GGTNACC 2 cut(s) 172, 362
BstENI CCTNNNNNAGG 1 cut(s) 840
BstHHI GCGC 2 cut(s) 655, 1147
BstMAI GTCTC 4 cut(s) 492, 2047, 2345, 2722
BstNI CCWGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
BstNSI RCATGY 5 cut(s) 227, 563, 1046, 2744, 2959
BstPAI GACNNNNGTC 1 cut(s) 1932
BstPI GGTNACC 2 cut(s) 172, 362
BstSCI CCNGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
BstSFI CTRYAG 3 cut(s) 129, 516, 1662
BstV1I GCAGC 8 cut(s) 121, 337, 349, 381, 907, 1648, 1838, 2797
BstX2I RGATCY 3 cut(s) 995, 2340, 2797
BstXI CCANNNNNNTGG 1 cut(s) 1723
BstYI RGATCY 3 cut(s) 995, 2340, 2797
BsuI GTATCC 1 cut(s) 2310
BsuRI GGCC 6 cut(s) 493, 744, 819, 2283, 2513, 2685
BtgZI GCGATG 2 cut(s) 1434, 2364
BtrI CACGTC 1 cut(s) 1833
BtsI GCAGTG 2 cut(s) 1614, 2902
BveI ACCTGC 1 cut(s) 1394
Cac8I GCNNGC 9 cut(s) 91, 184, 466, 705, 1040, 1044, 1048, 1969, 2376
CaiI CAGNNNCTG 1 cut(s) 1994
CfoI GCGC 2 cut(s) 655, 1147
Cfr10I RCCGGY 1 cut(s) 119
CseI GACGC 2 cut(s) 114, 786
CspCI CAANNNNNGTGG 2 cut(s) 735, 770
EaeI YGGCCR 1 cut(s) 491
Eam1104I CTCTTC 4 cut(s) 2, 1848, 2343, 2659
EarI CTCTTC 4 cut(s) 2, 1848, 2343, 2659
Eco130I CCWWGG 7 cut(s) 367, 547, 761, 1377, 1487, 1722, 1781
Eco147I AGGCCT 2 cut(s) 2283, 2685
Eco31I GGTCTC 2 cut(s) 2047, 2722
Eco47I GGWCC 8 cut(s) 543, 758, 1167, 1383, 1713, 2077, 2088, 2230
Eco57I CTGAAG 4 cut(s) 1605, 1760, 1961, 2886
Eco88I CYCGRG 1 cut(s) 1098
Eco91I GGTNACC 2 cut(s) 172, 362
EcoNI CCTNNNNNAGG 1 cut(s) 840
EcoO109I RGGNCCY 6 cut(s) 543, 818, 1167, 1383, 2088, 2230
EcoO65I GGTNACC 2 cut(s) 172, 362
EcoRII CCWGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
EcoT14I CCWWGG 7 cut(s) 367, 547, 761, 1377, 1487, 1722, 1781
ErhI CCWWGG 7 cut(s) 367, 547, 761, 1377, 1487, 1722, 1781
FaqI GGGAC 5 cut(s) 529, 1180, 1396, 2074, 2216
FauI CCCGC 2 cut(s) 421, 2477
FbaI TGATCA 1 cut(s) 2734
FblI GTMKAC 3 cut(s) 80, 212, 2156
Fnu4HI GCNGC 9 cut(s) 135, 338, 351, 395, 921, 1662, 1827, 2318, 2786
Fsp4HI GCNGC 9 cut(s) 135, 338, 351, 395, 921, 1662, 1827, 2318, 2786
GlaI GCGC 2 cut(s) 654, 1146
GluI GCNGC 9 cut(s) 135, 338, 351, 395, 921, 1662, 1827, 2318, 2786
GsaI CCCAGC 1 cut(s) 2272
GsuI CTGGAG 2 cut(s) 429, 2858
HaeIII GGCC 6 cut(s) 493, 744, 819, 2283, 2513, 2685
HapII CCGG 3 cut(s) 120, 1216, 2057
HgaI GACGC 2 cut(s) 114, 786
HhaI GCGC 2 cut(s) 655, 1147
Hin6I GCGC 2 cut(s) 653, 1145
HinP1I GCGC 2 cut(s) 653, 1145
HincII GTYRAC 4 cut(s) 81, 2440, 2862, 2887
HindII GTYRAC 4 cut(s) 81, 2440, 2862, 2887
HinfI GANTC 6 cut(s) 485, 672, 902, 1801, 2015, 2653
HpaI GTTAAC 1 cut(s) 2862
HpaII CCGG 3 cut(s) 120, 1216, 2057
HphI GGTGA 8 cut(s) 649, 855, 953, 1463, 1573, 2611, 2926, 2951
Hpy188III TCNNGA 5 cut(s) 977, 1216, 1847, 2021, 2418
Hpy99I CGWCG 3 cut(s) 64, 85, 101
HpyCH4IV ACGT 1 cut(s) 1832
HpySE526I ACGT 1 cut(s) 1832
HspAI GCGC 2 cut(s) 653, 1145
KflI GGGWCCC 2 cut(s) 1167, 2088
Kpn2I TCCGGA 1 cut(s) 1215
KpnI GGTACC 2 cut(s) 1944, 2101
Ksp22I TGATCA 1 cut(s) 2734
KspAI GTTAAC 1 cut(s) 2862
LguI GCTCTTC 1 cut(s) 1848
LmnI GCTCC 4 cut(s) 990, 1269, 2393, 2821
Lsp1109I GCAGC 8 cut(s) 121, 337, 349, 381, 907, 1648, 1838, 2797
MaeII ACGT 1 cut(s) 1832
MfeI CAATTG 3 cut(s) 1365, 2520, 2700
MflI RGATCY 3 cut(s) 995, 2340, 2797
MhlI GDGCHC 2 cut(s) 95, 1274
MlyI GAGTC 3 cut(s) 494, 911, 1810
MmeI TCCRAC 1 cut(s) 807
MroI TCCGGA 1 cut(s) 1215
MroXI GAANNNNTTC 2 cut(s) 1878, 2668
MslI CAYNNNNRTG 2 cut(s) 1055, 1835
MspA1I CMGCKG 3 cut(s) 521, 581, 2613
MspI CCGG 3 cut(s) 120, 1216, 2057
MspR9I CCNGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
MunI CAATTG 3 cut(s) 1365, 2520, 2700
Mva1269I GAATGC 3 cut(s) 91, 1971, 2559
MvaI CCWGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
NheI GCTAGC 1 cut(s) 703
NmeAIII GCCGAG 1 cut(s) 469
NmuCI GTSAC 4 cut(s) 941, 1445, 2363, 2617
NspI RCATGY 5 cut(s) 227, 563, 1046, 2744, 2959
PaeI GCATGC 1 cut(s) 1046
PceI AGGCCT 2 cut(s) 2283, 2685
PciI ACATGT 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 1848
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PctI GAATGC 3 cut(s) 91, 1971, 2559
PdmI GAANNNNTTC 2 cut(s) 1878, 2668
PfeI GAWTC 3 cut(s) 672, 2015, 2653
PflMI CCANNNNNTGG 1 cut(s) 1884
PfoI TCCNGGA 3 cut(s) 1326, 2656, 2814
PkrI GCNGC 9 cut(s) 136, 339, 352, 396, 922, 1663, 1828, 2319, 2787
PleI GAGTC 3 cut(s) 493, 910, 1809
PpsI GAGTC 3 cut(s) 493, 910, 1809
PpuMI RGGWCCY 5 cut(s) 543, 1167, 1383, 2088, 2230
PscI ACATGT 1 cut(s) 559
PshAI GACNNNNGTC 1 cut(s) 1932
PshBI ATTAAT 1 cut(s) 1515
Psp5II RGGWCCY 5 cut(s) 543, 1167, 1383, 2088, 2230
Psp6I CCWGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
PspEI GGTNACC 2 cut(s) 172, 362
PspFI CCCAGC 1 cut(s) 2268
PspGI CCWGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
PspPPI RGGWCCY 5 cut(s) 543, 1167, 1383, 2088, 2230
PstI CTGCAG 1 cut(s) 1666
PstNI CAGNNNCTG 1 cut(s) 1994
PsuI RGATCY 3 cut(s) 995, 2340, 2797
PvuII CAGCTG 3 cut(s) 521, 581, 2613
RseI CAYNNNNRTG 2 cut(s) 1055, 1835
SalI GTCGAC 1 cut(s) 79
SapI GCTCTTC 1 cut(s) 1848
SatI GCNGC 9 cut(s) 135, 338, 351, 395, 921, 1662, 1827, 2318, 2786
ScaI AGTACT 1 cut(s) 445
SchI GAGTC 3 cut(s) 494, 911, 1810
ScrFI CCNGG 9 cut(s) 178, 495, 843, 867, 938, 1328, 1823, 2658, 2816
SduI GDGCHC 2 cut(s) 95, 1274
SfcI CTRYAG 3 cut(s) 129, 516, 1662
SinI GGWCC 8 cut(s) 543, 758, 1167, 1383, 1713, 2077, 2088, 2230
SmiMI CAYNNNNRTG 2 cut(s) 1055, 1835
SmlI CTYRAG 1 cut(s) 1708
SmoI CTYRAG 1 cut(s) 1708
SpeI ACTAGT 2 cut(s) 295, 1130
SphI GCATGC 1 cut(s) 1046
SseBI AGGCCT 2 cut(s) 2283, 2685
SsiI CCGC 6 cut(s) 428, 1535, 1809, 1903, 2318, 2470
SspI AATATT 1 cut(s) 1204
StuI AGGCCT 2 cut(s) 2283, 2685
StyD4I CCNGG 9 cut(s) 176, 493, 841, 865, 936, 1326, 1821, 2656, 2814
StyI CCWWGG 7 cut(s) 367, 547, 761, 1377, 1487, 1722, 1781
TaiI ACGT 1 cut(s) 1835
TaqII GACCGA 1 cut(s) 564
TatI WGTACW 4 cut(s) 443, 556, 1575, 2567
TauI GCSGC 1 cut(s) 2320
TfiI GAWTC 3 cut(s) 672, 2015, 2653
TseFI GTSAC 4 cut(s) 941, 1445, 2363, 2617
TseI GCWGC 8 cut(s) 134, 337, 350, 394, 920, 1661, 1826, 2785
Tsp45I GTSAC 4 cut(s) 941, 1445, 2363, 2617
TspDTI ATGAA 8 cut(s) 17, 312, 428, 1218, 1362, 1785, 1994, 2523
TspGWI ACGGA 3 cut(s) 1534, 1737, 2862
Van91I CCANNNNNTGG 1 cut(s) 1884
VpaK11BI GGWCC 8 cut(s) 543, 758, 1167, 1383, 1713, 2077, 2088, 2230
VspI ATTAAT 1 cut(s) 1515
XagI CCTNNNNNAGG 1 cut(s) 840
XapI RAATTY 2 cut(s) 636, 1018
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 5 cut(s) 227, 563, 1046, 2744, 2959
XmiI GTMKAC 3 cut(s) 80, 212, 2156
XmnI GAANNNNTTC 2 cut(s) 1878, 2668
ZrmI AGTACT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.