Prupe.8G249300_v2.0.a1

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0006636
Physical Location & Seq
Forward (+)
21510723 .. 21516776
6054 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G249300.2

Sequence Viewer

Length: 3015 bp
ATGAAGAAGAGCAAGGGCAAGAACAATGGCTTGTTGCCGAACTCACTTAGGATCATATCGTCGTGCCTCAAAACTGTTTCGACGAATGCGAGCACCGTCGCTTCTACAGTTCGCTCTGCTGGTGCGTCTGTAGCTGCTTCTATTTCTGCTTCCGAGGATCAAAAGGATCAGGTAACTTGGGCTGGCTTTGGCAGGCTAGAGCTTAGTCACTCTGCCTTTAAGCATGTTCTCTTACTTGGTTATCAGAACGGATTTCAAGTTTTTGATGTAGAGGATGCCTCTAATTTCAGCGAACTGGTTTCAAAGCGCGATGGCCCAGTTTCATTCTTACAGATGCAGCCCTCTCCTGCAGCATCTGATGGTAACCAAGGATTCAGAATGGCGCATCCATTGCTGCTGGTTGTTGCTGGAGACGACACCAATGGTCCAGGGATTGTTCATAACACGAGCCACTTGGGAGGGATAGGCAGGGATAGTAATTTGGAGTCTCGGCCAGGAAACCCTGTCGGCTCTCCTACAGCTGTTCGGTTTTATTCCCTTAGGTCCCACGGTTATGTGCATGTTCTGAGATTTCGGTCTGCTGTGTGTATGATTAGATGCAGTCCTCGGATAGTAGCTGTGGGTCTTGCAACTCAAATTTACTGCTTTGACGCGCTCACCCTCGAAAACAAATTCAGTGTTCTTACCTATCCTGTTCCTCAGCTAGCCGGACAAGGATCAATTGGGTTTAATGTCGGTTATGGCCCAATGGCTGTGGGTCCAAGGTGGTTAGCCTATGCTTCCAACAGCCCACTAGTGTCAAACACAGGTCGCTTAGGACCCCAAAACCTCACTCCTTCTCCAGGAGTTAGTCCATCTACATCACCTGGCAGTGGTAGTTATGTGGCTCGTTATGCGATGGAGTCTAGTAAACATTTGGCTGCTGGAATAATTAACCTGGGTGACATGGGATGCAAAACCTTGTACAAATACTGTCAAGATCTGCTCCCAGATGGATCTAACTCTCCAATATCATCAAATTCAGGCTGGAAAGTCAGTCGGCATGCAGGAACAGAGATGGATAATGCAGGGATGGTTGTTGTCAAAGATTTTGTTTCCCAAGCTGTTATATCACAATTTAAAGCTCATACTAGCCCAATATCTGCTCTATGTTTCGATCCCAGTGGGACCCTTCTGGTTACAGCCTCCATATATGGAAATAACATTAATATTTTCCGGATTATGCCTTCAAGCAAACACAGTGGATCAGGTGGTCAGAACTTAGATTGGAGCTCATCTCATGTGCACCTTTACAAGTTGCATCGTGGAATAACATCAGCTATGATCCAGGACATTTGCTTTAGTCATTACAGTCAGTGGGTTGCAATTGTTTCATCCAAGGGGACCTGCCATGTTTTTGTTTTATCCCCTTTTGGTGGCGATGCTGGATTTCGACTTCTTAATACTCAGGGTGAAGAACCCTCCCTATATCCAGTTTTATCTCTACCTTGGTGGTCTACTTCTTCTTGCATTTTTAATCAACAATCTTGTCCACCCCCAGCACCTGTTGCTCTTTCCGTTGTGAGCAGGATAAAATATAGCAGTTTTGGATGGCTTAGCCCAGTCAACAACACTGCTTCTTCTACAACAGGGAAGGTGTTTGTGCCATCTGGTGCTGTTGCAGCTGTATTCCATAATTCATTATCTCAAAGTCCTCGGCAGAGTAACTCAAGGACCAGTACCTTGGAGCATCTATTAGTTTATACTCCATCTGGTCATGTAGTTCAACATGAACTTCAGCCAAGGATAGGGGTAGATCAGAGTCATAGTGGTACCCAGGCAGCTACGTCTATGCATATGCAGGAGGAAGATCTGAGAGTGAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGGCGGTCAGACTGGCCAGAAAGAGAGGACATTGTTTTAGGTACCACATCTGATAGACAAGATGTAGCAGAAATAAACCAAACTAAATCAGGTTCTGATGGTACTCATGGAATGGAGTCTCTAGACTTAAATGGTGCTGTTGGGGGGGAAAGGAGACTGGAAACTTACTCTGGAAAGCTCAATGATAGGTCCCACTGGTACCTCTCTAATGCAGAGGTGCAAATAAGTTCTTTGAGATTACCAATATGGCAAAAGTCTAAGATTTGTTTTTATACAATGGGTTGTCCAAGAGTCGATAGTTTTGCTGATGGAGAGTTTGAAATTGAAAAAGTCCCAGTTCATGAAATTGAAATGAGACAGAAGGAATTATTGCCTGTTTTTGAGCAGTTCCATATCATCAAATCAAGCTGGGATGACAGAGTCCCGGGTGGGAGATTTCCCAGTCATTCTTCGTCAGAACCTCATCAAGCTCAAGACAAGATCTTGGAAGAGACTGTTATTTGTCACTCAAAGCCTGCATCGCTTAGCTCCACGGAAAGCTCAGATGGGGGTTCGTCAAGAAGAATTGAGCATTTCCTCGATTTTGATCAAACGAACAATGAGAAGGCCCGCACAACAGTTTGTCAGATCTTGAATGGCCCGGAAAGAAGAGCCAATACAATTGTTGAGCCTTCATTAGAAAACCATATATCTTTCAGCATTCTGTGTACTCCATCTGAACATTTTAAGAACATCGATTCTCAAGTTTCCAGTTGTCTCACCAACGGTTTTCCTGTGTTAGAAAGTAAGTTGACCCCAGGAGGAAGAGTTTCTGCTGAAGAAGGCCTGTCTTTAAAAGCAATTGGGATCAGTGAGGTCTCAGTTTTATACTCTGATCAACATCCTTCAAGTACCAATATTGTGGCAGAGGGGGCTCCCACTTTGCAGCATCCAATAGATCTTTCACAGTTTTTCCAGGAGGAGCATTGTAACGCATTGGTGCCGAATGGATGCCATGGGTTAACTGAAGTCATAACTGATGATGTTGACAGTGACAGTAGCCACTGCGATAAGGTGAAAGCCATGGATGAGGAAGATAGTGAAATGCTTGGAGGCATGTTTGCCTTTTCTGATGAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

1005

Amino Acids

108.83

Weight (kDa)

6.0

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1394
Acc65I GGTACC 3 cut(s) 1811, 1934, 2091
AccB1I GGYRCC 4 cut(s) 1811, 1934, 2091, 2872
AccI GTMKAC 1 cut(s) 1496
AccII CGCG 2 cut(s) 309, 653
AccIII TCCGGA 1 cut(s) 1215
AciI CCGC 2 cut(s) 1897, 2503
AclWI GGATC 9 cut(s) 59, 165, 174, 724, 1003, 1151, 1252, 1318, 2747
AcoI YGGCCR 2 cut(s) 491, 1907
AcsI RAATTY 3 cut(s) 636, 671, 1018
AcuI CTGAAG 3 cut(s) 1760, 2730, 2919
AfaI GTAC 8 cut(s) 965, 1720, 1813, 1936, 1996, 2093, 2602, 2785
AfiI CCNNNNNNNGG 4 cut(s) 842, 872, 1415, 1787
AhlI ACTAGT 1 cut(s) 793
AjnI CCWGG 9 cut(s) 427, 493, 841, 865, 936, 1326, 1815, 2689, 2847
AjuI GAANNNNNNNTTGG 2 cut(s) 2818, 2850
Alw21I GWGCWC 3 cut(s) 95, 1274, 1287
Alw26I GTCTC 8 cut(s) 405, 492, 2016, 2041, 2242, 2378, 2654, 2755
Alw44I GTGCAC 1 cut(s) 1283
AlwI GGATC 9 cut(s) 59, 165, 174, 724, 1003, 1151, 1252, 1318, 2747
AlwNI CAGNNNCTG 3 cut(s) 356, 1544, 1988
Ama87I CYCGRG 1 cut(s) 2317
Aor13HI TCCGGA 1 cut(s) 1215
AoxI GGCC 7 cut(s) 313, 491, 742, 1907, 2499, 2530, 2716
ApaLI GTGCAC 1 cut(s) 1283
ApeKI GCWGC 8 cut(s) 134, 337, 350, 394, 920, 1661, 1820, 2818
ApoI RAATTY 3 cut(s) 636, 671, 1018
AseI ATTAAT 1 cut(s) 1206
Asp700I GAANNNNTTC 2 cut(s) 1872, 2701
Asp718I GGTACC 3 cut(s) 1811, 1934, 2091
AspLEI GCGC 3 cut(s) 309, 385, 655
AsuC2I CCSGG 3 cut(s) 2318, 2319, 2534
AsuHPI GGTGA 6 cut(s) 649, 855, 953, 1463, 2644, 2959
AsuNHI GCTAGC 1 cut(s) 703
AvaI CYCGRG 1 cut(s) 2317
AvaII GGWCC 8 cut(s) 425, 543, 758, 818, 1167, 1383, 1713, 2082
AxyI CCTNAGG 1 cut(s) 539
BaeGI GKGCMC 1 cut(s) 1287
BalI TGGCCA 1 cut(s) 1909
BanI GGYRCC 4 cut(s) 1811, 1934, 2091, 2872
BanII GRGCYC 2 cut(s) 1274, 2809
BarI GAAGNNNNNNTAC 2 cut(s) 2533, 2565
BauI CACGAG 1 cut(s) 445
Bbv12I GWGCWC 3 cut(s) 95, 1274, 1287
BbvCI CCTCAGC 1 cut(s) 699
BbvI GCAGC 8 cut(s) 121, 349, 362, 381, 907, 1673, 1832, 2830
BcgI CGANNNNNNTGC 2 cut(s) 2177, 2211
BciT130I CCWGG 9 cut(s) 429, 495, 843, 867, 938, 1328, 1817, 2691, 2849
BclI TGATCA 2 cut(s) 2479, 2767
BcnI CCSGG 3 cut(s) 2318, 2319, 2534
BcoDI GTCTC 8 cut(s) 405, 492, 2016, 2041, 2242, 2378, 2654, 2755
BcuI ACTAGT 1 cut(s) 793
BfaI CTAG 6 cut(s) 197, 704, 794, 906, 1131, 2015
BfmI CTRYAG 4 cut(s) 105, 129, 348, 516
BfuAI ACCTGC 1 cut(s) 1394
BglII AGATCT 5 cut(s) 979, 1849, 2373, 2520, 2830
BisI GCNGC 8 cut(s) 135, 338, 351, 395, 921, 1662, 1821, 2819
BlpI GCTNAGC 2 cut(s) 1595, 2417
BlsI GCNGC 8 cut(s) 136, 339, 352, 396, 922, 1663, 1822, 2820
Bme18I GGWCC 8 cut(s) 425, 543, 758, 818, 1167, 1383, 1713, 2082
BmeT110I CYCGRG 1 cut(s) 2317
BmrI ACTGGG 5 cut(s) 311, 1155, 1595, 2222, 2328
BmtI GCTAGC 1 cut(s) 707
BmuI ACTGGG 5 cut(s) 311, 1155, 1595, 2222, 2328
BplI GAGNNNNNCTC 4 cut(s) 263, 295, 1261, 1293
BpmI CTGGAG 2 cut(s) 429, 825
Bpu10I CCTNAGC 2 cut(s) 699, 814
Bpu1102I GCTNAGC 2 cut(s) 1595, 2417
BpuEI CTTGAG 3 cut(s) 1693, 2349, 2619
BpuMI CCSGG 3 cut(s) 2318, 2319, 2534
Bsa29I ATCGAT 1 cut(s) 2628
BsaBI GATNNNNATC 2 cut(s) 2478, 2772
BsaI GGTCTC 1 cut(s) 2755
BsaWI WCCGGW 1 cut(s) 1215
BsaXI ACNNNNNCTCC 4 cut(s) 823, 853, 2685, 2715
Bsc4I CCNNNNNNNGG 4 cut(s) 842, 872, 1415, 1787
Bse21I CCTNAGG 1 cut(s) 539
Bse3DI GCAATG 1 cut(s) 389
Bse8I GATNNNNATC 2 cut(s) 2478, 2772
BseAI TCCGGA 1 cut(s) 1215
BseBI CCWGG 9 cut(s) 429, 495, 843, 867, 938, 1328, 1817, 2691, 2849
BseCI ATCGAT 1 cut(s) 2628
BseJI GATNNNNATC 2 cut(s) 2478, 2772
BseLI CCNNNNNNNGG 4 cut(s) 842, 872, 1415, 1787
BseMI GCAATG 1 cut(s) 389
BseMII CTCAG 6 cut(s) 557, 713, 1460, 1844, 2448, 2766
BseRI GAGGAG 1 cut(s) 2867
BseSI GKGCMC 1 cut(s) 1287
BseXI GCAGC 8 cut(s) 121, 349, 362, 381, 907, 1673, 1832, 2830
BseYI CCCAGC 2 cut(s) 1537, 2301
Bsh1236I CGCG 2 cut(s) 309, 653
BshFI GGCC 7 cut(s) 315, 493, 744, 1909, 2501, 2532, 2718
BshNI GGYRCC 4 cut(s) 1811, 1934, 2091, 2872
BshVI ATCGAT 1 cut(s) 2628
BsiHKAI GWGCWC 3 cut(s) 95, 1274, 1287
BsiHKCI CYCGRG 1 cut(s) 2317
BsiSI CCGG 4 cut(s) 708, 1216, 2318, 2534
BslFI GGGAC 6 cut(s) 529, 1180, 1396, 2068, 2210, 2300
BslI CCNNNNNNNGG 4 cut(s) 842, 872, 1415, 1787
BsmAI GTCTC 8 cut(s) 405, 492, 2016, 2041, 2242, 2378, 2654, 2755
BsmBI CGTCTC 1 cut(s) 405
BsmFI GGGAC 6 cut(s) 529, 1180, 1396, 2068, 2210, 2300
BsmI GAATGC 2 cut(s) 91, 2592
BsnI GGCC 7 cut(s) 315, 493, 744, 1909, 2501, 2532, 2718
Bso31I GGTCTC 1 cut(s) 2755
BsoBI CYCGRG 1 cut(s) 2317
Bsp1286I GDGCHC 4 cut(s) 95, 1274, 1287, 2809
Bsp13I TCCGGA 1 cut(s) 1215
Bsp1407I TGTACA 1 cut(s) 963
Bsp1720I GCTNAGC 2 cut(s) 1595, 2417
Bsp19I CCATGG 2 cut(s) 2887, 2955
BspACI CCGC 2 cut(s) 1897, 2503
BspANI GGCC 7 cut(s) 315, 493, 744, 1909, 2501, 2532, 2718
BspCNI CTCAG 6 cut(s) 558, 712, 1459, 1845, 2447, 2765
BspDI ATCGAT 1 cut(s) 2628
BspEI TCCGGA 1 cut(s) 1215
BspFNI CGCG 2 cut(s) 309, 653
BspHI TCATGA 1 cut(s) 2233
BspMAI CTGCAG 1 cut(s) 352
BspMI ACCTGC 1 cut(s) 1394
BspOI GCTAGC 1 cut(s) 707
BspPI GGATC 9 cut(s) 59, 165, 174, 724, 1003, 1151, 1252, 1318, 2747
BspQI GCTCTTC 2 cut(s) 2, 2536
BspT107I GGYRCC 4 cut(s) 1811, 1934, 2091, 2872
BspTNI GGTCTC 1 cut(s) 2755
BsrDI GCAATG 1 cut(s) 389
BsrGI TGTACA 1 cut(s) 963
BssSI CACGAG 1 cut(s) 445
BssT1I CCWWGG 8 cut(s) 367, 761, 1377, 1487, 1722, 1781, 2887, 2955
Bst2BI CACGAG 1 cut(s) 445
Bst2UI CCWGG 9 cut(s) 429, 495, 843, 867, 938, 1328, 1817, 2691, 2849
Bst6I CTCTTC 4 cut(s) 2, 2376, 2536, 2692
BstAPI GCANNNNNTGC 2 cut(s) 391, 1547
BstAUI TGTACA 1 cut(s) 963
BstC8I GCNNGC 7 cut(s) 91, 184, 194, 705, 1044, 2409, 2503
BstDSI CCRYGG 4 cut(s) 547, 2424, 2887, 2955
BstEII GGTNACC 1 cut(s) 362
BstENI CCTNNNNNAGG 1 cut(s) 840
BstFNI CGCG 2 cut(s) 309, 653
BstHHI GCGC 3 cut(s) 309, 385, 655
BstMAI GTCTC 8 cut(s) 405, 492, 2016, 2041, 2242, 2378, 2654, 2755
BstMWI GCNNNNNNNGC 7 cut(s) 131, 391, 893, 1547, 1661, 2413, 2804
BstNI CCWGG 9 cut(s) 429, 495, 843, 867, 938, 1328, 1817, 2691, 2849
BstNSI RCATGY 4 cut(s) 227, 563, 1046, 2992
BstPI GGTNACC 1 cut(s) 362
BstSFI CTRYAG 4 cut(s) 105, 129, 348, 516
BstSLI GKGCMC 1 cut(s) 1287
BstUI CGCG 2 cut(s) 309, 653
BstV1I GCAGC 8 cut(s) 121, 349, 362, 381, 907, 1673, 1832, 2830
BstX2I RGATCY 6 cut(s) 979, 995, 1849, 2373, 2520, 2830
BstXI CCANNNNNNTGG 2 cut(s) 1723, 2794
BstYI RGATCY 6 cut(s) 979, 995, 1849, 2373, 2520, 2830
Bsu15I ATCGAT 1 cut(s) 2628
Bsu36I CCTNAGG 1 cut(s) 539
BsuRI GGCC 7 cut(s) 315, 493, 744, 1909, 2501, 2532, 2718
BsuTUI ATCGAT 1 cut(s) 2628
BtgI CCRYGG 4 cut(s) 547, 2424, 2887, 2955
BtgZI GCGATG 4 cut(s) 324, 911, 1434, 2397
BtsI GCAGTG 3 cut(s) 877, 1611, 2935
BveI ACCTGC 1 cut(s) 1394
Cac8I GCNNGC 7 cut(s) 91, 184, 194, 705, 1044, 2409, 2503
CaiI CAGNNNCTG 3 cut(s) 356, 1544, 1988
CciI TCATGA 1 cut(s) 2233
CfoI GCGC 3 cut(s) 309, 385, 655
Cfr9I CCCGGG 1 cut(s) 2317
ClaI ATCGAT 1 cut(s) 2628
CseI GACGC 2 cut(s) 114, 659
Csp6I GTAC 8 cut(s) 964, 1719, 1812, 1935, 1995, 2092, 2601, 2784
CspCI CAANNNNNGTGG 4 cut(s) 735, 770, 1222, 1257
CviQI GTAC 8 cut(s) 964, 1719, 1812, 1935, 1995, 2092, 2601, 2784
DraI TTTAAA 2 cut(s) 1120, 2727
EaeI YGGCCR 2 cut(s) 491, 1907
Eam1104I CTCTTC 4 cut(s) 2, 2376, 2536, 2692
EarI CTCTTC 4 cut(s) 2, 2376, 2536, 2692
Ecl136II GAGCTC 1 cut(s) 1272
Eco130I CCWWGG 8 cut(s) 367, 761, 1377, 1487, 1722, 1781, 2887, 2955
Eco147I AGGCCT 1 cut(s) 2718
Eco24I GRGCYC 2 cut(s) 1274, 2809
Eco31I GGTCTC 1 cut(s) 2755
Eco47I GGWCC 8 cut(s) 425, 543, 758, 818, 1167, 1383, 1713, 2082
Eco53kI GAGCTC 1 cut(s) 1272
Eco57I CTGAAG 3 cut(s) 1760, 2730, 2919
Eco81I CCTNAGG 1 cut(s) 539
Eco88I CYCGRG 1 cut(s) 2317
Eco91I GGTNACC 1 cut(s) 362
EcoICRI GAGCTC 1 cut(s) 1272
EcoNI CCTNNNNNAGG 1 cut(s) 840
EcoO109I RGGNCCY 5 cut(s) 543, 818, 1167, 1383, 2082
EcoO65I GGTNACC 1 cut(s) 362
EcoRII CCWGG 9 cut(s) 427, 493, 841, 865, 936, 1326, 1815, 2689, 2847
EcoT14I CCWWGG 8 cut(s) 367, 761, 1377, 1487, 1722, 1781, 2887, 2955
EcoT22I ATGCAT 1 cut(s) 1836
EcoT38I GRGCYC 2 cut(s) 1274, 2809
ErhI CCWWGG 8 cut(s) 367, 761, 1377, 1487, 1722, 1781, 2887, 2955
Esp3I CGTCTC 1 cut(s) 405
FaqI GGGAC 6 cut(s) 529, 1180, 1396, 2068, 2210, 2300
FauI CCCGC 1 cut(s) 2510
FauNDI CATATG 1 cut(s) 1836
FbaI TGATCA 2 cut(s) 2479, 2767
FblI GTMKAC 1 cut(s) 1496
Fnu4HI GCNGC 8 cut(s) 135, 338, 351, 395, 921, 1662, 1821, 2819
FriOI GRGCYC 2 cut(s) 1274, 2809
Fsp4HI GCNGC 8 cut(s) 135, 338, 351, 395, 921, 1662, 1821, 2819
FspBI CTAG 6 cut(s) 197, 704, 794, 906, 1131, 2015
GlaI GCGC 3 cut(s) 308, 384, 654
GluI GCNGC 8 cut(s) 135, 338, 351, 395, 921, 1662, 1821, 2819
GsaI CCCAGC 2 cut(s) 1541, 2305
GsuI CTGGAG 2 cut(s) 429, 825
HaeIII GGCC 7 cut(s) 315, 493, 744, 1909, 2501, 2532, 2718
HapII CCGG 4 cut(s) 708, 1216, 2318, 2534
HgaI GACGC 2 cut(s) 114, 659
HhaI GCGC 3 cut(s) 309, 385, 655
Hin6I GCGC 3 cut(s) 307, 383, 653
HinP1I GCGC 3 cut(s) 307, 383, 653
HincII GTYRAC 4 cut(s) 1606, 2685, 2895, 2920
HindII GTYRAC 4 cut(s) 1606, 2685, 2895, 2920
HinfI GANTC 8 cut(s) 372, 485, 902, 1801, 2009, 2184, 2313, 2630
HpaI GTTAAC 1 cut(s) 2895
HpaII CCGG 4 cut(s) 708, 1216, 2318, 2534
HphI GGTGA 6 cut(s) 649, 855, 953, 1463, 2644, 2959
Hpy166II GTNNAC 9 cut(s) 911, 1285, 1497, 1532, 1606, 2601, 2685, 2895, 2920
Hpy188III TCNNGA 8 cut(s) 977, 1216, 2015, 2064, 2234, 2366, 2451, 2524
Hpy8I GTNNAC 9 cut(s) 911, 1285, 1497, 1532, 1606, 2601, 2685, 2895, 2920
Hpy99I CGWCG 3 cut(s) 64, 85, 101
HpyCH4IV ACGT 1 cut(s) 1826
HpyF10VI GCNNNNNNNGC 7 cut(s) 131, 391, 893, 1547, 1661, 2413, 2804
HpySE526I ACGT 1 cut(s) 1826
HspAI GCGC 3 cut(s) 307, 383, 653
KflI GGGWCCC 1 cut(s) 1167
Kpn2I TCCGGA 1 cut(s) 1215
KpnI GGTACC 3 cut(s) 1815, 1938, 2095
Ksp22I TGATCA 2 cut(s) 2479, 2767
KspAI GTTAAC 1 cut(s) 2895
LguI GCTCTTC 2 cut(s) 2, 2536
LmnI GCTCC 6 cut(s) 990, 1269, 1726, 2426, 2812, 2854
Lsp1109I GCAGC 8 cut(s) 121, 349, 362, 381, 907, 1673, 1832, 2830
MaeI CTAG 6 cut(s) 197, 704, 794, 906, 1131, 2015
MaeII ACGT 1 cut(s) 1826
MaeIII GTNAC 9 cut(s) 172, 206, 362, 941, 1177, 1703, 2396, 2861, 2924
MfeI CAATTG 4 cut(s) 720, 1365, 2553, 2733
MflI RGATCY 6 cut(s) 979, 995, 1849, 2373, 2520, 2830
MhlI GDGCHC 4 cut(s) 95, 1274, 1287, 2809
MlsI TGGCCA 1 cut(s) 1909
MluNI TGGCCA 1 cut(s) 1909
MlyI GAGTC 6 cut(s) 494, 911, 1810, 2018, 2193, 2322
MmeI TCCRAC 1 cut(s) 807
Mox20I TGGCCA 1 cut(s) 1909
Mph1103I ATGCAT 1 cut(s) 1836
MroI TCCGGA 1 cut(s) 1215
MroXI GAANNNNTTC 2 cut(s) 1872, 2701
MscI TGGCCA 1 cut(s) 1909
MslI CAYNNNNRTG 1 cut(s) 552
Msp20I TGGCCA 1 cut(s) 1909
MspA1I CMGCKG 2 cut(s) 521, 1664
MspI CCGG 4 cut(s) 708, 1216, 2318, 2534
MunI CAATTG 4 cut(s) 720, 1365, 2553, 2733
Mva1269I GAATGC 2 cut(s) 91, 2592
MvaI CCWGG 9 cut(s) 429, 495, 843, 867, 938, 1328, 1817, 2691, 2849
MvnI CGCG 2 cut(s) 309, 653
MwoI GCNNNNNNNGC 7 cut(s) 131, 391, 893, 1547, 1661, 2413, 2804
NciI CCSGG 3 cut(s) 2318, 2319, 2534
NcoI CCATGG 2 cut(s) 2887, 2955
NdeI CATATG 1 cut(s) 1836
NheI GCTAGC 1 cut(s) 703
NmeAIII GCCGAG 2 cut(s) 469, 1675
NmuCI GTSAC 4 cut(s) 206, 941, 2396, 2924
NsiI ATGCAT 1 cut(s) 1836
NspI RCATGY 4 cut(s) 227, 563, 1046, 2992
PaeI GCATGC 1 cut(s) 1046
PagI TCATGA 1 cut(s) 2233
PceI AGGCCT 1 cut(s) 2718
PciSI GCTCTTC 2 cut(s) 2, 2536
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PctI GAATGC 2 cut(s) 91, 2592
PdmI GAANNNNTTC 2 cut(s) 1872, 2701
PfeI GAWTC 2 cut(s) 372, 2630
PflFI GACNNNGTC 1 cut(s) 2312
PfoI TCCNGGA 3 cut(s) 841, 1326, 2847
PkrI GCNGC 8 cut(s) 136, 339, 352, 396, 922, 1663, 1822, 2820
PleI GAGTC 6 cut(s) 493, 910, 1809, 2017, 2192, 2321
PpsI GAGTC 6 cut(s) 493, 910, 1809, 2017, 2192, 2321
PpuMI RGGWCCY 5 cut(s) 543, 818, 1167, 1383, 2082
PshBI ATTAAT 1 cut(s) 1206
Psp124BI GAGCTC 1 cut(s) 1274
Psp5II RGGWCCY 5 cut(s) 543, 818, 1167, 1383, 2082
Psp6I CCWGG 9 cut(s) 427, 493, 841, 865, 936, 1326, 1815, 2689, 2847
PspEI GGTNACC 1 cut(s) 362
PspFI CCCAGC 2 cut(s) 1537, 2301
PspGI CCWGG 9 cut(s) 427, 493, 841, 865, 936, 1326, 1815, 2689, 2847
PspPPI RGGWCCY 5 cut(s) 543, 818, 1167, 1383, 2082
PstI CTGCAG 1 cut(s) 352
PstNI CAGNNNCTG 3 cut(s) 356, 1544, 1988
PsuI RGATCY 6 cut(s) 979, 995, 1849, 2373, 2520, 2830
PsyI GACNNNGTC 1 cut(s) 2312
PvuII CAGCTG 2 cut(s) 521, 1664
RsaI GTAC 8 cut(s) 965, 1720, 1813, 1936, 1996, 2093, 2602, 2785
RsaNI GTAC 8 cut(s) 964, 1719, 1812, 1935, 1995, 2092, 2601, 2784
RseI CAYNNNNRTG 1 cut(s) 552
SacI GAGCTC 1 cut(s) 1274
SapI GCTCTTC 2 cut(s) 2, 2536
SatI GCNGC 8 cut(s) 135, 338, 351, 395, 921, 1662, 1821, 2819
SchI GAGTC 6 cut(s) 494, 911, 1810, 2018, 2193, 2322
SduI GDGCHC 4 cut(s) 95, 1274, 1287, 2809
SfcI CTRYAG 4 cut(s) 105, 129, 348, 516
SinI GGWCC 8 cut(s) 425, 543, 758, 818, 1167, 1383, 1713, 2082
SmaI CCCGGG 1 cut(s) 2319
SmiMI CAYNNNNRTG 1 cut(s) 552
SmlI CTYRAG 3 cut(s) 1708, 2364, 2634
SmoI CTYRAG 3 cut(s) 1708, 2364, 2634
SpeI ACTAGT 1 cut(s) 793
SphI GCATGC 1 cut(s) 1046
SseBI AGGCCT 1 cut(s) 2718
SsiI CCGC 2 cut(s) 1897, 2503
SspI AATATT 2 cut(s) 1210, 2791
SspMI CTAG 6 cut(s) 197, 704, 794, 906, 1131, 2015
SstI GAGCTC 1 cut(s) 1274
StuI AGGCCT 1 cut(s) 2718
StyI CCWWGG 8 cut(s) 367, 761, 1377, 1487, 1722, 1781, 2887, 2955
TaiI ACGT 1 cut(s) 1829
TaqI TCGA 7 cut(s) 80, 663, 1155, 1432, 2187, 2472, 2628
TaqII GACCGA 1 cut(s) 564
TatI WGTACW 2 cut(s) 963, 2600
TfiI GAWTC 2 cut(s) 372, 2630
TseFI GTSAC 4 cut(s) 206, 941, 2396, 2924
TseI GCWGC 8 cut(s) 134, 337, 350, 394, 920, 1661, 1820, 2818
Tsp45I GTSAC 4 cut(s) 206, 941, 2396, 2924
TspDTI ATGAA 9 cut(s) 17, 312, 428, 1362, 1668, 1785, 2222, 2250, 2556
TspGWI ACGGA 3 cut(s) 264, 1546, 2441
TspMI CCCGGG 1 cut(s) 2317
Tth111I GACNNNGTC 1 cut(s) 2312
VneI GTGCAC 1 cut(s) 1283
VpaK11BI GGWCC 8 cut(s) 425, 543, 758, 818, 1167, 1383, 1713, 2082
VspI ATTAAT 1 cut(s) 1206
XagI CCTNNNNNAGG 1 cut(s) 840
XapI RAATTY 3 cut(s) 636, 671, 1018
XbaI TCTAGA 1 cut(s) 2014
XceI RCATGY 4 cut(s) 227, 563, 1046, 2992
XmaI CCCGGG 1 cut(s) 2317
XmiI GTMKAC 1 cut(s) 1496
XmnI GAANNNNTTC 2 cut(s) 1872, 2701
XspI CTAG 6 cut(s) 197, 704, 794, 906, 1131, 2015
Zsp2I ATGCAT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.