Rh6AG337400

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006636
Physical Location & Seq
Forward (+)
53773320 .. 53779016
5697 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG337400.1

Sequence Viewer

Length: 2160 bp
ATGAAGAAAGGGAAGGGGAGGAACAACGGCGGCTTGTTGCCGAGCTCGCTGAGGATCATATCGTCGTGCCTCAAGACTGTTTCGACGAATGCCAGCACCGTCGCTTCTACGGTTCGCTCCGCCAGTGCGTCCGTCGCTGCTTCTATATCTGCTTCCGAGGATCAGAAGGATCAGGTAACCTGGGCTGGCTTTGACAGGCTAGAGCTTGGTCATTCTGCCTTCAAACGCGTTCTGTTGCTTGGTTATCAGAATGGATTTCAAGTTTTTGACGTCGAGGATGCCTCTAACTACAGCGAACTGGTTTCAAAGCGTGATGGCCCAGTTTCGTTCTTACAGATGCAGCCCTATCCTGCAGCATCTGATGATGATGAGGAGGGATTTAGAGCTTCTCATCCTATGTTGCTGGTTGTTGCTGGAGATGACACCAGTGGTTCAGGCGTTGTTCAAAATCACAGCAACTTGGGAGGCTTAGGAAGAGATGGTCATTTGGAGTCTCGGCCAGGAAACCCTTTCAGCTCTCCTACAGCTGTTCGGTTTTACTCGCTCAGGTCCCACAGTTATGTGCATGTTCTAAGATTTCGGTCTGCTGTCTGTATGATTAGATGCAGTCCTCGGATAGTAGCTGTTGGTCTTGCAAGTCAAATATATTGCTTTGATGCGCTCACCCTCGAAAATAAATTCAGTGTTCTTACCTATCCTGTTCCTCAGCTAGCAGGACAAGGATCCTCTGGGTTTAACGTAGGTTATGGCCCAATGGCTGTGGGTCCTAGGTGGCTAGCTTATGCTTCCAACAGCCCACTCATGTCAAACACAAGTCGCTTAGGTCCCCACAATCTTACTCCTTCTCCAGGAGTTAGTCCATCTACATCACCTGGTAATGGTAGTTACGTGGCTCGTTATGCAATGGAGTCTAGTAAACAGCTGGCCGCTGGAATTATCAACCTGGGTGACATGGGATGCAAAACCTTGTACAAATACTGTCAAGAGCTCCTCCCAGATGGGTCTAGTTCTCCAGTATCATCAAATTCAGGCTGGAAAGTTAGCAGGCTTGCCGGAACAGAAATGGATAGTGCTGGGATGGTTGTTGTCAAAGATTTTGTTACCCGAGCTGTTATATCGCAGTTTAAAGCTCATACTAGTCCAATATCTGCACTGTGTTTTGATCCCAGTGGGACCCTTCTTGTTACTGCCTCAATATATGGAAATAACATTAATATTTTTCGGATAATGCCTTCATGCAAACGCAATGGATCAGGCGTTCAGAACATGAATTGGAGCTCGTCTCATGTGCATCTATACAAACTGCATCGTGGAATAACTTCAGCTATGATCCAGGACATTTGCTTCAGTCATTATTCTCAATGGGTTGCAATTGTTTCATCCAAGGGGACCTGCCATGTTTTTGTTTTATCCCCTTTTGGTGGTGATGCTGGATTTCAAGTTCAACATTCCCAGGGTGAAGAACCCACACTTTATCCAGTTTTATCTCTTCCTTGGTGGTCTACTTCTTCTTGCATCATGAGTCAACAATCTTTTCCACCCCCACCGCCTGTTGTTCTTTCAGTTGTGAGCAGAATAAAGTATAGTAGTTTTGGATGGCTTAGCACAGTCAACAATGCCGCTGGTTCCACCACAGGAAAGGTATTTGTACCATCAGGTGCTGTTGCGGCTGTTTTTCATAATTCCCTTTCTCAAAGTGTTCAGCACAGTAACTCAAGGGCTGGTACCTTGGAGCATCTATTAGTTTATACTCCATCAGGTCATGTAGTTCAACATGAACTTCAGCCAAGAGTAGGGGTAGAACAAAGTCATAGTGGTTTGAATACCCAGACAGCTACATACATGCACATGCAGGAGGAAGACCTGAGAGTGAAAGTTGAACCTATACAGTGGTGGGATGTATGCAGACGTTCAGATTGGCCAGAAAGAGAGGACTGTATTTTAGGAATTAACGCTGATCGTCAAGATGTGGCTGAAACAATTCAAAGTAAATCAGGTTCTGATGGTACTTATGCGTTGGAGTTTCTTGACTTAAATGGTGGTGTTGAGGGGAAAAGGAACCTGGAAACGCATAGGTCCAGGAATATTTCTAATGCAGAGGTGCAAATAAATTCTTTCAGACTACCAATATGGCAAAAGTCGAAGGTATTTTTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

719

Amino Acids

77.92

Weight (kDa)

8.45

Isoelectric Point (pI)

52.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCAS3_WD40 PF21034 77 - 480 1.8e-34 BCAS3, WD40 repeat
BCAS3 PF12490 615 - 718 1.3e-25 BCAS3 microtubule associated cell migration factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 1400
Acc65I GGTACC 1 cut(s) 1724
AccB1I GGYRCC 1 cut(s) 1724
AccI GTMKAC 1 cut(s) 1502
AccII CGCG 1 cut(s) 228
AciI CCGC 6 cut(s) 30, 120, 927, 1547, 1620, 1667
AclWI GGATC 8 cut(s) 62, 168, 177, 717, 730, 1157, 1258, 1324
AcoI YGGCCR 3 cut(s) 497, 924, 1919
AcsI RAATTY 3 cut(s) 677, 1024, 2110
AcuI CTGAAG 3 cut(s) 1305, 1330, 1766
AcyI GRCGYC 1 cut(s) 270
AfaI GTAC 4 cut(s) 971, 1650, 1726, 2008
AfiI CCNNNNNNNGG 4 cut(s) 848, 878, 1421, 1793
AflIII ACRYGT 1 cut(s) 226
AhlI ACTAGT 1 cut(s) 1136
AjnI CCWGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
AloI GAACNNNNNNTCC 4 cut(s) 1242, 1274, 1425, 1457
Alw21I GWGCWC 3 cut(s) 47, 990, 1280
Alw26I GTCTC 2 cut(s) 498, 1287
AlwI GGATC 8 cut(s) 62, 168, 177, 717, 730, 1157, 1258, 1324
AlwNI CAGNNNCTG 3 cut(s) 359, 1661, 2000
Ama87I CYCGRG 1 cut(s) 1104
AoxI GGCC 5 cut(s) 316, 497, 748, 924, 1919
ApeKI GCWGC 3 cut(s) 137, 340, 353
ApoI RAATTY 3 cut(s) 677, 1024, 2110
AseI ATTAAT 1 cut(s) 1212
Asp700I GAANNNNTTC 2 cut(s) 1318, 1980
Asp718I GGTACC 1 cut(s) 1724
AspA2I CCTAGG 1 cut(s) 767
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 8 cut(s) 317, 549, 749, 764, 824, 1173, 1389, 2076
AsuHPI GGTGA 5 cut(s) 655, 861, 959, 1436, 1469
AsuNHI GCTAGC 2 cut(s) 709, 775
AvaI CYCGRG 1 cut(s) 1104
AvaII GGWCC 6 cut(s) 549, 764, 824, 1173, 1389, 2076
AvrII CCTAGG 1 cut(s) 767
BalI TGGCCA 1 cut(s) 1921
BamHI GGATCC 1 cut(s) 722
BanI GGYRCC 1 cut(s) 1724
BanII GRGCYC 3 cut(s) 47, 990, 1280
BbsI GAAGAC 1 cut(s) 1866
Bbv12I GWGCWC 3 cut(s) 47, 990, 1280
BbvCI CCTCAGC 2 cut(s) 50, 705
BbvI GCAGC 3 cut(s) 124, 352, 365
BccI CCATC 9 cut(s) 308, 473, 868, 992, 1072, 1590, 1660, 1762, 1997
BceAI ACGGC 1 cut(s) 43
BciT130I CCWGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
BcoDI GTCTC 2 cut(s) 498, 1287
BcuI ACTAGT 1 cut(s) 1136
BfaI CTAG 7 cut(s) 200, 710, 768, 776, 912, 1005, 1137
BfmI CTRYAG 3 cut(s) 289, 351, 522
BfuAI ACCTGC 1 cut(s) 1400
BisI GCNGC 7 cut(s) 31, 138, 341, 354, 927, 1620, 1668
BlnI CCTAGG 1 cut(s) 767
BlpI GCTNAGC 1 cut(s) 1601
BlsI GCNGC 7 cut(s) 32, 139, 342, 355, 928, 1621, 1669
Bme1390I CCNGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
Bme18I GGWCC 6 cut(s) 549, 764, 824, 1173, 1389, 2076
BmeT110I CYCGRG 1 cut(s) 1104
BmgT120I GGNCC 8 cut(s) 317, 549, 749, 764, 824, 1173, 1389, 2076
BmrFI CCNGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
BmrI ACTGGG 2 cut(s) 314, 1161
BmtI GCTAGC 2 cut(s) 713, 779
BmuI ACTGGG 2 cut(s) 314, 1161
BpiI GAAGAC 1 cut(s) 1866
BplI GAGNNNNNCTC 4 cut(s) 266, 298, 1267, 1299
BpmI CTGGAG 3 cut(s) 435, 831, 996
Bpu10I CCTNAGC 5 cut(s) 50, 469, 545, 705, 820
Bpu1102I GCTNAGC 1 cut(s) 1601
BpuEI CTTGAG 2 cut(s) 56, 1699
BsaAI YACGTR 1 cut(s) 889
BsaHI GRCGYC 1 cut(s) 270
BsaXI ACNNNNNCTCC 2 cut(s) 829, 859
Bsc4I CCNNNNNNNGG 4 cut(s) 848, 878, 1421, 1793
Bse1I ACTGG 7 cut(s) 123, 303, 320, 426, 1013, 1167, 1478
Bse3DI GCAATG 2 cut(s) 909, 1252
BseBI CCWGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
BseGI GGATG 7 cut(s) 283, 391, 962, 1083, 1379, 1601, 1903
BseLI CCNNNNNNNGG 4 cut(s) 848, 878, 1421, 1793
BseMI GCAATG 2 cut(s) 909, 1252
BseMII CTCAG 4 cut(s) 41, 559, 719, 1856
BseNI ACTGG 7 cut(s) 123, 303, 320, 426, 1013, 1167, 1478
BseRI GAGGAG 2 cut(s) 386, 980
BseXI GCAGC 3 cut(s) 124, 352, 365
BseYI CCCAGC 1 cut(s) 1073
BsgI GTGCAG 1 cut(s) 1134
Bsh1236I CGCG 1 cut(s) 228
BshFI GGCC 5 cut(s) 318, 499, 750, 926, 1921
BshNI GGYRCC 1 cut(s) 1724
BsiHKAI GWGCWC 3 cut(s) 47, 990, 1280
BsiHKCI CYCGRG 1 cut(s) 1104
BsiSI CCGG 1 cut(s) 1053
BslFI GGGAC 4 cut(s) 535, 810, 1186, 1402
BslI CCNNNNNNNGG 4 cut(s) 848, 878, 1421, 1793
BsmAI GTCTC 2 cut(s) 498, 1287
BsmBI CGTCTC 1 cut(s) 1287
BsmFI GGGAC 4 cut(s) 535, 810, 1186, 1402
BsmI GAATGC 1 cut(s) 94
BsnI GGCC 5 cut(s) 318, 499, 750, 926, 1921
BsoBI CYCGRG 1 cut(s) 1104
Bsp1286I GDGCHC 3 cut(s) 47, 990, 1280
Bsp1407I TGTACA 1 cut(s) 969
Bsp143I GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
Bsp1720I GCTNAGC 1 cut(s) 1601
BspACI CCGC 6 cut(s) 30, 120, 927, 1547, 1620, 1667
BspANI GGCC 5 cut(s) 318, 499, 750, 926, 1921
BspCNI CTCAG 4 cut(s) 42, 558, 718, 1857
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 1 cut(s) 1518
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 1400
BspOI GCTAGC 2 cut(s) 713, 779
BspPI GGATC 8 cut(s) 62, 168, 177, 717, 730, 1157, 1258, 1324
BspT107I GGYRCC 1 cut(s) 1724
BsrDI GCAATG 2 cut(s) 909, 1252
BsrGI TGTACA 1 cut(s) 969
BsrI ACTGG 7 cut(s) 123, 303, 320, 426, 1013, 1167, 1478
BssMI GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 4 cut(s) 767, 1383, 1493, 1728
Bst2UI CCWGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
Bst6I CTCTTC 2 cut(s) 469, 1494
BstACI GRCGYC 1 cut(s) 270
BstAUI TGTACA 1 cut(s) 969
BstBAI YACGTR 1 cut(s) 889
BstC8I GCNNGC 8 cut(s) 47, 94, 187, 711, 777, 924, 1046, 1050
BstDEI CTNAG 8 cut(s) 50, 469, 545, 572, 705, 820, 1601, 1865
BstEII GGTNACC 1 cut(s) 175
BstENI CCTNNNNNAGG 1 cut(s) 846
BstF5I GGATG 7 cut(s) 283, 391, 962, 1083, 1379, 1601, 1903
BstFNI CGCG 1 cut(s) 228
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 8 cut(s) 57, 163, 172, 725, 1165, 1253, 1332, 1960
BstMAI GTCTC 2 cut(s) 498, 1287
BstMBI GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
BstMWI GCNNNNNNNGC 4 cut(s) 46, 134, 899, 1667
BstNI CCWGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
BstNSI RCATGY 3 cut(s) 569, 1846, 1852
BstPI GGTNACC 1 cut(s) 175
BstSCI CCNGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
BstSFI CTRYAG 3 cut(s) 289, 351, 522
BstUI CGCG 1 cut(s) 228
BstV1I GCAGC 3 cut(s) 124, 352, 365
BstV2I GAAGAC 1 cut(s) 1866
BstX2I RGATCY 1 cut(s) 722
BstYI RGATCY 1 cut(s) 722
BsuRI GGCC 5 cut(s) 318, 499, 750, 926, 1921
BtsCI GGATG 7 cut(s) 283, 391, 962, 1083, 1379, 1601, 1903
BtsIMutI CAGTG 6 cut(s) 130, 433, 688, 1151, 1174, 1895
BveI ACCTGC 1 cut(s) 1400
Cac8I GCNNGC 8 cut(s) 47, 94, 187, 711, 777, 924, 1046, 1050
CaiI CAGNNNCTG 3 cut(s) 359, 1661, 2000
CciI TCATGA 1 cut(s) 1518
CfoI GCGC 1 cut(s) 661
Cfr13I GGNCC 8 cut(s) 317, 549, 749, 764, 824, 1173, 1389, 2076
CseI GACGC 1 cut(s) 117
CsiI ACCWGGT 1 cut(s) 871
Csp6I GTAC 4 cut(s) 970, 1649, 1725, 2007
CspCI CAANNNNNGTGG 2 cut(s) 741, 776
CviQI GTAC 4 cut(s) 970, 1649, 1725, 2007
DdeI CTNAG 8 cut(s) 50, 469, 545, 572, 705, 820, 1601, 1865
DpnI GATC 8 cut(s) 56, 162, 171, 724, 1164, 1252, 1331, 1959
DpnII GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
DraI TTTAAA 1 cut(s) 1126
EaeI YGGCCR 3 cut(s) 497, 924, 1919
Eam1104I CTCTTC 2 cut(s) 469, 1494
EarI CTCTTC 2 cut(s) 469, 1494
EciI GGCGGA 1 cut(s) 109
Ecl136II GAGCTC 3 cut(s) 45, 988, 1278
Eco130I CCWWGG 4 cut(s) 767, 1383, 1493, 1728
Eco24I GRGCYC 3 cut(s) 47, 990, 1280
Eco47I GGWCC 6 cut(s) 549, 764, 824, 1173, 1389, 2076
Eco53kI GAGCTC 3 cut(s) 45, 988, 1278
Eco57I CTGAAG 3 cut(s) 1305, 1330, 1766
Eco88I CYCGRG 1 cut(s) 1104
Eco91I GGTNACC 1 cut(s) 175
EcoICRI GAGCTC 3 cut(s) 45, 988, 1278
EcoNI CCTNNNNNAGG 1 cut(s) 846
EcoO109I RGGNCCY 5 cut(s) 549, 764, 824, 1173, 1389
EcoO65I GGTNACC 1 cut(s) 175
EcoRII CCWGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
EcoT14I CCWWGG 4 cut(s) 767, 1383, 1493, 1728
EcoT38I GRGCYC 3 cut(s) 47, 990, 1280
ErhI CCWWGG 4 cut(s) 767, 1383, 1493, 1728
Esp3I CGTCTC 1 cut(s) 1287
FaqI GGGAC 4 cut(s) 535, 810, 1186, 1402
FblI GTMKAC 1 cut(s) 1502
Fnu4HI GCNGC 7 cut(s) 31, 138, 341, 354, 927, 1620, 1668
FokI GGATG 7 cut(s) 290, 378, 969, 1090, 1366, 1608, 1910
FriOI GRGCYC 3 cut(s) 47, 990, 1280
Fsp4HI GCNGC 7 cut(s) 31, 138, 341, 354, 927, 1620, 1668
FspBI CTAG 7 cut(s) 200, 710, 768, 776, 912, 1005, 1137
GlaI GCGC 1 cut(s) 660
GluI GCNGC 7 cut(s) 31, 138, 341, 354, 927, 1620, 1668
GsaI CCCAGC 1 cut(s) 1077
GsuI CTGGAG 3 cut(s) 435, 831, 996
HaeIII GGCC 5 cut(s) 318, 499, 750, 926, 1921
HapII CCGG 1 cut(s) 1053
HgaI GACGC 1 cut(s) 117
HhaI GCGC 1 cut(s) 661
Hin1I GRCGYC 1 cut(s) 270
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 2 cut(s) 1526, 1612
HindII GTYRAC 2 cut(s) 1526, 1612
HinfI GANTC 3 cut(s) 491, 908, 1522
HpaII CCGG 1 cut(s) 1053
HphI GGTGA 5 cut(s) 655, 861, 959, 1436, 1469
Hpy166II GTNNAC 4 cut(s) 917, 1503, 1526, 1612
Hpy188III TCNNGA 5 cut(s) 73, 983, 1519, 1964, 2027
Hpy8I GTNNAC 4 cut(s) 917, 1503, 1526, 1612
Hpy99I CGWCG 5 cut(s) 67, 88, 104, 137, 275
HpyAV CCTTC 7 cut(s) 7, 160, 229, 852, 1187, 1242, 2137
HpyCH4IV ACGT 4 cut(s) 270, 738, 888, 1909
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 134, 899, 1667
HpyF3I CTNAG 8 cut(s) 50, 469, 545, 572, 705, 820, 1601, 1865
HpySE526I ACGT 4 cut(s) 270, 738, 888, 1909
Hsp92I GRCGYC 1 cut(s) 270
HspAI GCGC 1 cut(s) 659
KflI GGGWCCC 1 cut(s) 1173
KpnI GGTACC 1 cut(s) 1728
Kzo9I GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
LmnI GCTCC 4 cut(s) 122, 993, 1275, 1732
Lsp1109I GCAGC 3 cut(s) 124, 352, 365
MabI ACCWGGT 1 cut(s) 871
MaeI CTAG 7 cut(s) 200, 710, 768, 776, 912, 1005, 1137
MaeII ACGT 4 cut(s) 270, 738, 888, 1909
MaeIII GTNAC 6 cut(s) 175, 884, 947, 1099, 1183, 1709
MalI GATC 8 cut(s) 56, 162, 171, 724, 1164, 1252, 1331, 1959
MboI GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
MboII GAAGA 6 cut(s) 16, 486, 1472, 1481, 1500, 1871
MfeI CAATTG 1 cut(s) 1371
MflI RGATCY 1 cut(s) 722
MhlI GDGCHC 3 cut(s) 47, 990, 1280
MlsI TGGCCA 1 cut(s) 1921
MluCI AATT 9 cut(s) 677, 933, 1024, 1270, 1371, 1681, 1947, 1980, 2110
MluI ACGCGT 1 cut(s) 226
MluNI TGGCCA 1 cut(s) 1921
MlyI GAGTC 3 cut(s) 500, 917, 1531
MmeI TCCRAC 2 cut(s) 813, 1998
Mox20I TGGCCA 1 cut(s) 1921
MroXI GAANNNNTTC 2 cut(s) 1318, 1980
MscI TGGCCA 1 cut(s) 1921
MseI TTAA 5 cut(s) 735, 1125, 1212, 1950, 2033
MslI CAYNNNNRTG 2 cut(s) 558, 1847
Msp20I TGGCCA 1 cut(s) 1921
MspA1I CMGCKG 4 cut(s) 527, 922, 929, 1622
MspI CCGG 1 cut(s) 1053
MspR9I CCNGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
MunI CAATTG 1 cut(s) 1371
Mva1269I GAATGC 1 cut(s) 94
MvaI CCWGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
MvnI CGCG 1 cut(s) 228
MwoI GCNNNNNNNGC 4 cut(s) 46, 134, 899, 1667
NdeII GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
NheI GCTAGC 2 cut(s) 709, 775
NmeAIII GCCGAG 2 cut(s) 66, 475
NmuCI GTSAC 1 cut(s) 947
NspI RCATGY 3 cut(s) 569, 1846, 1852
PagI TCATGA 1 cut(s) 1518
PasI CCCWGGG 1 cut(s) 1453
PctI GAATGC 1 cut(s) 94
PdmI GAANNNNTTC 2 cut(s) 1318, 1980
PfoI TCCNGGA 3 cut(s) 847, 1332, 2078
PkrI GCNGC 7 cut(s) 32, 139, 342, 355, 928, 1621, 1669
PleI GAGTC 3 cut(s) 499, 916, 1530
PpsI GAGTC 3 cut(s) 499, 916, 1530
Ppu21I YACGTR 1 cut(s) 889
PpuMI RGGWCCY 5 cut(s) 549, 764, 824, 1173, 1389
PshBI ATTAAT 1 cut(s) 1212
Psp124BI GAGCTC 3 cut(s) 47, 990, 1280
Psp5II RGGWCCY 5 cut(s) 549, 764, 824, 1173, 1389
Psp6I CCWGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
PspEI GGTNACC 1 cut(s) 175
PspFI CCCAGC 1 cut(s) 1073
PspGI CCWGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
PspPI GGNCC 8 cut(s) 317, 549, 749, 764, 824, 1173, 1389, 2076
PspPPI RGGWCCY 5 cut(s) 549, 764, 824, 1173, 1389
PsrI GAACNNNNNNTAC 2 cut(s) 1981, 2013
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 3 cut(s) 359, 1661, 2000
PsuI RGATCY 1 cut(s) 722
PvuII CAGCTG 2 cut(s) 527, 922
RsaI GTAC 4 cut(s) 971, 1650, 1726, 2008
RsaNI GTAC 4 cut(s) 970, 1649, 1725, 2007
RseI CAYNNNNRTG 2 cut(s) 558, 1847
SacI GAGCTC 3 cut(s) 47, 990, 1280
SaqAI TTAA 5 cut(s) 735, 1125, 1212, 1950, 2033
SatI GCNGC 7 cut(s) 31, 138, 341, 354, 927, 1620, 1668
Sau3AI GATC 8 cut(s) 54, 160, 169, 722, 1162, 1250, 1329, 1957
Sau96I GGNCC 8 cut(s) 317, 549, 749, 764, 824, 1173, 1389, 2076
SchI GAGTC 3 cut(s) 500, 917, 1531
ScrFI CCNGG 9 cut(s) 181, 501, 849, 873, 944, 1334, 1454, 2063, 2080
SduI GDGCHC 3 cut(s) 47, 990, 1280
SexAI ACCWGGT 1 cut(s) 871
SfcI CTRYAG 3 cut(s) 289, 351, 522
SinI GGWCC 6 cut(s) 549, 764, 824, 1173, 1389, 2076
SmiMI CAYNNNNRTG 2 cut(s) 558, 1847
SmlI CTYRAG 2 cut(s) 71, 1714
SmoI CTYRAG 2 cut(s) 71, 1714
SpeI ACTAGT 1 cut(s) 1136
Sse9I AATT 9 cut(s) 677, 933, 1024, 1270, 1371, 1681, 1947, 1980, 2110
SsiI CCGC 6 cut(s) 30, 120, 927, 1547, 1620, 1667
SspI AATATT 2 cut(s) 1216, 2086
SspMI CTAG 7 cut(s) 200, 710, 768, 776, 912, 1005, 1137
SstI GAGCTC 3 cut(s) 47, 990, 1280
StyD4I CCNGG 9 cut(s) 179, 499, 847, 871, 942, 1332, 1452, 2061, 2078
StyI CCWWGG 4 cut(s) 767, 1383, 1493, 1728
TaiI ACGT 4 cut(s) 273, 741, 891, 1912
TaqI TCGA 4 cut(s) 83, 273, 669, 2141
TaqII GACCGA 1 cut(s) 570
TasI AATT 9 cut(s) 677, 933, 1024, 1270, 1371, 1681, 1947, 1980, 2110
TatI WGTACW 1 cut(s) 969
TauI GCSGC 4 cut(s) 33, 929, 1622, 1670
Tru1I TTAA 5 cut(s) 735, 1125, 1212, 1950, 2033
Tru9I TTAA 5 cut(s) 735, 1125, 1212, 1950, 2033
TscAI CASTG 6 cut(s) 130, 433, 688, 1158, 1174, 1895
TseFI GTSAC 1 cut(s) 947
TseI GCWGC 3 cut(s) 137, 340, 353
Tsp45I GTSAC 1 cut(s) 947
TspDTI ATGAA 6 cut(s) 17, 1224, 1283, 1368, 1667, 1791
TspGWI ACGGA 1 cut(s) 121
TspRI CASTG 6 cut(s) 130, 433, 688, 1158, 1174, 1895
VpaK11BI GGWCC 6 cut(s) 549, 764, 824, 1173, 1389, 2076
VspI ATTAAT 1 cut(s) 1212
XagI CCTNNNNNAGG 1 cut(s) 846
XapI RAATTY 3 cut(s) 677, 1024, 2110
XceI RCATGY 3 cut(s) 569, 1846, 1852
XmaJI CCTAGG 1 cut(s) 767
XmiI GTMKAC 1 cut(s) 1502
XmnI GAANNNNTTC 2 cut(s) 1318, 1980
XspI CTAG 7 cut(s) 200, 710, 768, 776, 912, 1005, 1137
ZraI GACGTC 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.