Rh6DG337600

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0006636
Physical Location & Seq
Forward (+)
54176663 .. 54183499
6837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG337600.1

Sequence Viewer

Length: 2157 bp
ATGAAGAAAGGGAAGGGGAGGAACAACGGCGGCTTGTTGCCGAGCTCGCTGAGGATCATATCGTCGTGCCTCAAGACTGTTTCGACGAATGCCAGCACCGTCGCTTCTACGGTTCGCTCCGCCGGTGCGTCCGTCGCTGCTTCTATTTCTGCTTCCGAGGATCAGAAGGATCAGGTAACCTGGGCTGGCTTTGACAGGCTAGAGCTTGGTCATTCTGCCTTCAAACGCGTTCTGTTGCTTGGTTATCAGAATGGATTTCAAGTTTTTGATGTCGAGGATGCCTCTAACTACAGCGAACTGGTTTCAAAGCGTGATGGCCCAGTTTCGTTCTTACAGATGCAGCCCTATCCTGCAGCATCTGATGATGAGGAGGGATTTAGAGCTTCTCATCCTATGTTGCTGGTTGTTGCTGGAGATGACACCAATGGTTCAGGCGTTGTTCAAAATCACAGCAACTTGGGAGGCTTAGGAAGAGATGGTCATTTGGAGTCTCGGCCAGGAAACCCTTTCAGCTCTCCTACAGCTGTTCGGTTTTACTCACTCAGGTCCCACAGTTATGTGCATGTTCTGAGATTTCGGTCTGCTGTCTGTATGATTAGATGCAGTCCTCGGATAGTAGCTGTTGGTCTTGCAAGTCAAATATATTGCTTTGATGCGCTCACCCTCGAAAATAAATTCAGTGTTCTTACCTATCCTGTTCCTCAGCTAGCAGGACAAGGATCCTCTGGGTTTAACGTAGGTTATGGCCCAATGGCTGTGGGTCCTAGGTGGCTAGCTTATGCTTCCAACAGCCCACTCATGTCAAACACAAGTCGCTTAGGTCCCCACAATCTTACCCCTTCTCCAGGAGTTAGTCCATCTACATCACCTGGTAATGGTAGTTACGTGGCTCGTTATGCAATGGAGTCTAGTAAACAGCTGGCCGCTGGAATTATCAACCTGGGTGACATGGGATGCAAAACCTTGTACAAATACTGTCAAGAGCTCCTCCCAGATGGGTCTAGTTCTCCAGTATCATCAAATTCAGGCTGGAAAGTTAGCAGGCTTGCCGGAACAGAAATGGATAGTGCTGGGATGGTTGTTGTCAAAGATTTTGTTACCCGAGCTGTTATATCGCAGTTTAAAGCTCATACTAGTCCAATATCTGCACTGTGTTTTGATCCCAGTGGGACCCTTCTTGTTACTGCCTCAATATATGGAAATAACATTAATATTTTTCGGATAATGCCTTCATGCAAACGCAATGGATCAGGCGTTCAGAACATGAATTGGAGCTCATCTCATGTGCATCTATACAAACTGCATCGTGGAATAACATCAGCTATGATCCAGGACATTTGCTTCAGTCATTATTCTCAATGGGTTGCAATTGTTTCATCCAAGGGGACCTGCCATGTTTTTGTTTTATCCCCTTTTGGTGGTGATGCTGGATTTCAAGTTCAACATTCCCAGGGTGAAGAACCCACACTATATCCAGTTTTATCTCTTCCTTGGTGGTCTACTTCTTCTTGCATCATGAGTCAACAATCTTTTCCACCCCCACCGCCTGTTGTTCTTTCAGTTGTGAGCAGAATAAAGTATAGTAGTTTTGGATGGCTTAGCACGGTCAACAATGCCGCTGGTTCCACAACAGGAAAGGTGTTTGTACCATCAGGTGCTGTTGCGGCTGTTTTTCATAATTCCCTTTCTCAAAGTGTTCAGCACAGTAACTCAAGGGCTGGTACCTTGGAGCATCTATTAGTTTATACTCCATCAGGTCATGTAGTTCAACATGAACTTCAGCCAAGAGTAGGGGTAGAACAAAGTCATAGTGGTTTGAATACCCAGACAGCTACATACATGCACATGCAGGAGGAAGACCTGAGAGTGAAAGTTGAACCTATACAGTGGTGGGATGTATGCAGACGTTCAGATTGGCCAGAAAGAGAGGACTGTATTTTAGGAATTAATGCTGATCGTCAAGATGTGGCTGAAACAATTCAAAGTAAATCAGGTTCTGATGGTACTTATGCATTGGAGTTTCTTGACTTAAATGGTGGTGTTGAGGGGAAAAGGAACCTGGAAACGCATAGGTCCAGGAATATTTCTAATGCAGAGGTGCAAATAAATTCTTTCAGATTACCAATATGGCAAAAGTCGAAGGTATTTTTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

718

Amino Acids

77.8

Weight (kDa)

8.56

Isoelectric Point (pI)

51.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCAS3_WD40 PF21034 174 - 479 1.1e-31 BCAS3, WD40 repeat
BCAS3 PF12490 614 - 717 1.3e-25 BCAS3 microtubule associated cell migration factor, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1397
Acc65I GGTACC 1 cut(s) 1721
AccB1I GGYRCC 1 cut(s) 1721
AccI GTMKAC 1 cut(s) 1499
AccII CGCG 1 cut(s) 228
AciI CCGC 6 cut(s) 30, 120, 924, 1544, 1617, 1664
AclWI GGATC 8 cut(s) 62, 168, 177, 714, 727, 1154, 1255, 1321
AcoI YGGCCR 3 cut(s) 494, 921, 1916
AcsI RAATTY 3 cut(s) 674, 1021, 2107
AcuI CTGAAG 2 cut(s) 1327, 1763
AfaI GTAC 4 cut(s) 968, 1647, 1723, 2005
AfiI CCNNNNNNNGG 4 cut(s) 845, 875, 1418, 1790
AflIII ACRYGT 1 cut(s) 226
AhlI ACTAGT 1 cut(s) 1133
AjnI CCWGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
AloI GAACNNNNNNTCC 4 cut(s) 1239, 1271, 1422, 1454
Alw21I GWGCWC 3 cut(s) 47, 987, 1277
Alw26I GTCTC 1 cut(s) 495
AlwI GGATC 8 cut(s) 62, 168, 177, 714, 727, 1154, 1255, 1321
AlwNI CAGNNNCTG 3 cut(s) 359, 1658, 1997
Ama87I CYCGRG 1 cut(s) 1101
AoxI GGCC 5 cut(s) 316, 494, 745, 921, 1916
ApeKI GCWGC 3 cut(s) 137, 340, 353
ApoI RAATTY 3 cut(s) 674, 1021, 2107
AseI ATTAAT 2 cut(s) 1209, 1947
Asp700I GAANNNNTTC 1 cut(s) 1977
Asp718I GGTACC 1 cut(s) 1721
AspA2I CCTAGG 1 cut(s) 764
AspLEI GCGC 1 cut(s) 658
AspS9I GGNCC 8 cut(s) 317, 546, 746, 761, 821, 1170, 1386, 2073
AsuHPI GGTGA 5 cut(s) 652, 858, 956, 1433, 1466
AsuNHI GCTAGC 2 cut(s) 706, 772
AvaI CYCGRG 1 cut(s) 1101
AvaII GGWCC 6 cut(s) 546, 761, 821, 1170, 1386, 2073
AvrII CCTAGG 1 cut(s) 764
BalI TGGCCA 1 cut(s) 1918
BamHI GGATCC 1 cut(s) 719
BanI GGYRCC 1 cut(s) 1721
BanII GRGCYC 3 cut(s) 47, 987, 1277
BbsI GAAGAC 1 cut(s) 1863
Bbv12I GWGCWC 3 cut(s) 47, 987, 1277
BbvCI CCTCAGC 2 cut(s) 50, 702
BbvI GCAGC 3 cut(s) 124, 352, 365
BccI CCATC 9 cut(s) 308, 470, 865, 989, 1069, 1587, 1657, 1759, 1994
BceAI ACGGC 1 cut(s) 43
BciT130I CCWGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
BcoDI GTCTC 1 cut(s) 495
BcuI ACTAGT 1 cut(s) 1133
BfaI CTAG 7 cut(s) 200, 707, 765, 773, 909, 1002, 1134
BfmI CTRYAG 3 cut(s) 289, 351, 519
BfuAI ACCTGC 1 cut(s) 1397
BisI GCNGC 7 cut(s) 31, 138, 341, 354, 924, 1617, 1665
BlnI CCTAGG 1 cut(s) 764
BlpI GCTNAGC 1 cut(s) 1598
BlsI GCNGC 7 cut(s) 32, 139, 342, 355, 925, 1618, 1666
Bme1390I CCNGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
Bme18I GGWCC 6 cut(s) 546, 761, 821, 1170, 1386, 2073
BmeT110I CYCGRG 1 cut(s) 1101
BmgT120I GGNCC 8 cut(s) 317, 546, 746, 761, 821, 1170, 1386, 2073
BmrFI CCNGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
BmrI ACTGGG 2 cut(s) 314, 1158
BmtI GCTAGC 2 cut(s) 710, 776
BmuI ACTGGG 2 cut(s) 314, 1158
BpiI GAAGAC 1 cut(s) 1863
BplI GAGNNNNNCTC 4 cut(s) 266, 298, 1264, 1296
BpmI CTGGAG 3 cut(s) 432, 828, 993
Bpu10I CCTNAGC 4 cut(s) 50, 466, 702, 817
Bpu1102I GCTNAGC 1 cut(s) 1598
BpuEI CTTGAG 2 cut(s) 56, 1696
BsaAI YACGTR 1 cut(s) 886
BsaXI ACNNNNNCTCC 2 cut(s) 826, 856
Bsc4I CCNNNNNNNGG 4 cut(s) 845, 875, 1418, 1790
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 5 cut(s) 303, 320, 1010, 1164, 1475
Bse3DI GCAATG 2 cut(s) 906, 1249
BseBI CCWGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
BseGI GGATG 7 cut(s) 283, 388, 959, 1080, 1376, 1598, 1900
BseLI CCNNNNNNNGG 4 cut(s) 845, 875, 1418, 1790
BseMI GCAATG 2 cut(s) 906, 1249
BseMII CTCAG 5 cut(s) 41, 556, 560, 716, 1853
BseNI ACTGG 5 cut(s) 303, 320, 1010, 1164, 1475
BseRI GAGGAG 2 cut(s) 383, 977
BseXI GCAGC 3 cut(s) 124, 352, 365
BseYI CCCAGC 1 cut(s) 1070
BsgI GTGCAG 1 cut(s) 1131
Bsh1236I CGCG 1 cut(s) 228
BshFI GGCC 5 cut(s) 318, 496, 747, 923, 1918
BshNI GGYRCC 1 cut(s) 1721
BsiHKAI GWGCWC 3 cut(s) 47, 987, 1277
BsiHKCI CYCGRG 1 cut(s) 1101
BsiSI CCGG 2 cut(s) 123, 1050
BslFI GGGAC 4 cut(s) 532, 807, 1183, 1399
BslI CCNNNNNNNGG 4 cut(s) 845, 875, 1418, 1790
BsmAI GTCTC 1 cut(s) 495
BsmFI GGGAC 4 cut(s) 532, 807, 1183, 1399
BsmI GAATGC 1 cut(s) 94
BsnI GGCC 5 cut(s) 318, 496, 747, 923, 1918
BsoBI CYCGRG 1 cut(s) 1101
Bsp1286I GDGCHC 3 cut(s) 47, 987, 1277
Bsp1407I TGTACA 1 cut(s) 966
Bsp143I GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
Bsp1720I GCTNAGC 1 cut(s) 1598
BspACI CCGC 6 cut(s) 30, 120, 924, 1544, 1617, 1664
BspANI GGCC 5 cut(s) 318, 496, 747, 923, 1918
BspCNI CTCAG 5 cut(s) 42, 555, 561, 715, 1854
BspFNI CGCG 1 cut(s) 228
BspHI TCATGA 1 cut(s) 1515
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 1397
BspOI GCTAGC 2 cut(s) 710, 776
BspPI GGATC 8 cut(s) 62, 168, 177, 714, 727, 1154, 1255, 1321
BspT107I GGYRCC 1 cut(s) 1721
BsrDI GCAATG 2 cut(s) 906, 1249
BsrFI RCCGGY 1 cut(s) 122
BsrGI TGTACA 1 cut(s) 966
BsrI ACTGG 5 cut(s) 303, 320, 1010, 1164, 1475
BssAI RCCGGY 1 cut(s) 122
BssMI GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
BssT1I CCWWGG 4 cut(s) 764, 1380, 1490, 1725
Bst2UI CCWGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
Bst6I CTCTTC 2 cut(s) 466, 1491
BstAUI TGTACA 1 cut(s) 966
BstBAI YACGTR 1 cut(s) 886
BstC8I GCNNGC 8 cut(s) 47, 94, 187, 708, 774, 921, 1043, 1047
BstDEI CTNAG 8 cut(s) 50, 466, 542, 569, 702, 817, 1598, 1862
BstEII GGTNACC 1 cut(s) 175
BstENI CCTNNNNNAGG 1 cut(s) 843
BstF5I GGATG 7 cut(s) 283, 388, 959, 1080, 1376, 1598, 1900
BstFNI CGCG 1 cut(s) 228
BstHHI GCGC 1 cut(s) 658
BstKTI GATC 8 cut(s) 57, 163, 172, 722, 1162, 1250, 1329, 1957
BstMAI GTCTC 1 cut(s) 495
BstMBI GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
BstMWI GCNNNNNNNGC 4 cut(s) 46, 134, 896, 1664
BstNI CCWGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
BstNSI RCATGY 3 cut(s) 566, 1843, 1849
BstPI GGTNACC 1 cut(s) 175
BstSCI CCNGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
BstSFI CTRYAG 3 cut(s) 289, 351, 519
BstUI CGCG 1 cut(s) 228
BstV1I GCAGC 3 cut(s) 124, 352, 365
BstV2I GAAGAC 1 cut(s) 1863
BstX2I RGATCY 1 cut(s) 719
BstYI RGATCY 1 cut(s) 719
BsuRI GGCC 5 cut(s) 318, 496, 747, 923, 1918
BtsCI GGATG 7 cut(s) 283, 388, 959, 1080, 1376, 1598, 1900
BtsIMutI CAGTG 4 cut(s) 685, 1148, 1171, 1892
BveI ACCTGC 1 cut(s) 1397
Cac8I GCNNGC 8 cut(s) 47, 94, 187, 708, 774, 921, 1043, 1047
CaiI CAGNNNCTG 3 cut(s) 359, 1658, 1997
CciI TCATGA 1 cut(s) 1515
CfoI GCGC 1 cut(s) 658
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 8 cut(s) 317, 546, 746, 761, 821, 1170, 1386, 2073
CseI GACGC 1 cut(s) 117
CsiI ACCWGGT 1 cut(s) 868
Csp6I GTAC 4 cut(s) 967, 1646, 1722, 2004
CspCI CAANNNNNGTGG 2 cut(s) 738, 773
CviQI GTAC 4 cut(s) 967, 1646, 1722, 2004
DdeI CTNAG 8 cut(s) 50, 466, 542, 569, 702, 817, 1598, 1862
DpnI GATC 8 cut(s) 56, 162, 171, 721, 1161, 1249, 1328, 1956
DpnII GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
DraI TTTAAA 1 cut(s) 1123
EaeI YGGCCR 3 cut(s) 494, 921, 1916
Eam1104I CTCTTC 2 cut(s) 466, 1491
EarI CTCTTC 2 cut(s) 466, 1491
EciI GGCGGA 1 cut(s) 109
Ecl136II GAGCTC 3 cut(s) 45, 985, 1275
Eco130I CCWWGG 4 cut(s) 764, 1380, 1490, 1725
Eco24I GRGCYC 3 cut(s) 47, 987, 1277
Eco47I GGWCC 6 cut(s) 546, 761, 821, 1170, 1386, 2073
Eco53kI GAGCTC 3 cut(s) 45, 985, 1275
Eco57I CTGAAG 2 cut(s) 1327, 1763
Eco88I CYCGRG 1 cut(s) 1101
Eco91I GGTNACC 1 cut(s) 175
EcoICRI GAGCTC 3 cut(s) 45, 985, 1275
EcoNI CCTNNNNNAGG 1 cut(s) 843
EcoO109I RGGNCCY 5 cut(s) 546, 761, 821, 1170, 1386
EcoO65I GGTNACC 1 cut(s) 175
EcoRII CCWGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
EcoT14I CCWWGG 4 cut(s) 764, 1380, 1490, 1725
EcoT22I ATGCAT 1 cut(s) 2014
EcoT38I GRGCYC 3 cut(s) 47, 987, 1277
ErhI CCWWGG 4 cut(s) 764, 1380, 1490, 1725
FaqI GGGAC 4 cut(s) 532, 807, 1183, 1399
FblI GTMKAC 1 cut(s) 1499
Fnu4HI GCNGC 7 cut(s) 31, 138, 341, 354, 924, 1617, 1665
FokI GGATG 7 cut(s) 290, 375, 966, 1087, 1363, 1605, 1907
FriOI GRGCYC 3 cut(s) 47, 987, 1277
Fsp4HI GCNGC 7 cut(s) 31, 138, 341, 354, 924, 1617, 1665
FspBI CTAG 7 cut(s) 200, 707, 765, 773, 909, 1002, 1134
GlaI GCGC 1 cut(s) 657
GluI GCNGC 7 cut(s) 31, 138, 341, 354, 924, 1617, 1665
GsaI CCCAGC 1 cut(s) 1074
GsuI CTGGAG 3 cut(s) 432, 828, 993
HaeIII GGCC 5 cut(s) 318, 496, 747, 923, 1918
HapII CCGG 2 cut(s) 123, 1050
HgaI GACGC 1 cut(s) 117
HhaI GCGC 1 cut(s) 658
Hin6I GCGC 1 cut(s) 656
HinP1I GCGC 1 cut(s) 656
HincII GTYRAC 2 cut(s) 1523, 1609
HindII GTYRAC 2 cut(s) 1523, 1609
HinfI GANTC 3 cut(s) 488, 905, 1519
HpaII CCGG 2 cut(s) 123, 1050
HphI GGTGA 5 cut(s) 652, 858, 956, 1433, 1466
Hpy166II GTNNAC 4 cut(s) 914, 1500, 1523, 1609
Hpy188III TCNNGA 5 cut(s) 73, 980, 1516, 1961, 2024
Hpy8I GTNNAC 4 cut(s) 914, 1500, 1523, 1609
Hpy99I CGWCG 4 cut(s) 67, 88, 104, 137
HpyAV CCTTC 7 cut(s) 7, 160, 229, 849, 1184, 1239, 2134
HpyCH4IV ACGT 3 cut(s) 735, 885, 1906
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 134, 896, 1664
HpyF3I CTNAG 8 cut(s) 50, 466, 542, 569, 702, 817, 1598, 1862
HpySE526I ACGT 3 cut(s) 735, 885, 1906
HspAI GCGC 1 cut(s) 656
KflI GGGWCCC 1 cut(s) 1170
KpnI GGTACC 1 cut(s) 1725
Kzo9I GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
LmnI GCTCC 4 cut(s) 122, 990, 1272, 1729
Lsp1109I GCAGC 3 cut(s) 124, 352, 365
MabI ACCWGGT 1 cut(s) 868
MaeI CTAG 7 cut(s) 200, 707, 765, 773, 909, 1002, 1134
MaeII ACGT 3 cut(s) 735, 885, 1906
MaeIII GTNAC 6 cut(s) 175, 881, 944, 1096, 1180, 1706
MalI GATC 8 cut(s) 56, 162, 171, 721, 1161, 1249, 1328, 1956
MboI GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
MboII GAAGA 6 cut(s) 16, 483, 1469, 1478, 1497, 1868
MfeI CAATTG 1 cut(s) 1368
MflI RGATCY 1 cut(s) 719
MhlI GDGCHC 3 cut(s) 47, 987, 1277
MlsI TGGCCA 1 cut(s) 1918
MluCI AATT 9 cut(s) 674, 930, 1021, 1267, 1368, 1678, 1944, 1977, 2107
MluI ACGCGT 1 cut(s) 226
MluNI TGGCCA 1 cut(s) 1918
MlyI GAGTC 3 cut(s) 497, 914, 1528
MmeI TCCRAC 1 cut(s) 810
Mox20I TGGCCA 1 cut(s) 1918
Mph1103I ATGCAT 1 cut(s) 2014
MroXI GAANNNNTTC 1 cut(s) 1977
MscI TGGCCA 1 cut(s) 1918
MseI TTAA 5 cut(s) 732, 1122, 1209, 1947, 2030
MslI CAYNNNNRTG 2 cut(s) 555, 1844
Msp20I TGGCCA 1 cut(s) 1918
MspA1I CMGCKG 4 cut(s) 524, 919, 926, 1619
MspI CCGG 2 cut(s) 123, 1050
MspR9I CCNGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
MunI CAATTG 1 cut(s) 1368
Mva1269I GAATGC 1 cut(s) 94
MvaI CCWGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
MvnI CGCG 1 cut(s) 228
MwoI GCNNNNNNNGC 4 cut(s) 46, 134, 896, 1664
NdeII GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
NheI GCTAGC 2 cut(s) 706, 772
NmeAIII GCCGAG 2 cut(s) 66, 472
NmuCI GTSAC 1 cut(s) 944
NsiI ATGCAT 1 cut(s) 2014
NspI RCATGY 3 cut(s) 566, 1843, 1849
PagI TCATGA 1 cut(s) 1515
PasI CCCWGGG 1 cut(s) 1450
PctI GAATGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 1977
PfoI TCCNGGA 3 cut(s) 844, 1329, 2075
PkrI GCNGC 7 cut(s) 32, 139, 342, 355, 925, 1618, 1666
PleI GAGTC 3 cut(s) 496, 913, 1527
PpsI GAGTC 3 cut(s) 496, 913, 1527
Ppu21I YACGTR 1 cut(s) 886
PpuMI RGGWCCY 5 cut(s) 546, 761, 821, 1170, 1386
PshBI ATTAAT 2 cut(s) 1209, 1947
Psp124BI GAGCTC 3 cut(s) 47, 987, 1277
Psp5II RGGWCCY 5 cut(s) 546, 761, 821, 1170, 1386
Psp6I CCWGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
PspEI GGTNACC 1 cut(s) 175
PspFI CCCAGC 1 cut(s) 1070
PspGI CCWGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
PspPI GGNCC 8 cut(s) 317, 546, 746, 761, 821, 1170, 1386, 2073
PspPPI RGGWCCY 5 cut(s) 546, 761, 821, 1170, 1386
PsrI GAACNNNNNNTAC 2 cut(s) 1978, 2010
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 3 cut(s) 359, 1658, 1997
PsuI RGATCY 1 cut(s) 719
PvuII CAGCTG 2 cut(s) 524, 919
RsaI GTAC 4 cut(s) 968, 1647, 1723, 2005
RsaNI GTAC 4 cut(s) 967, 1646, 1722, 2004
RseI CAYNNNNRTG 2 cut(s) 555, 1844
SacI GAGCTC 3 cut(s) 47, 987, 1277
SaqAI TTAA 5 cut(s) 732, 1122, 1209, 1947, 2030
SatI GCNGC 7 cut(s) 31, 138, 341, 354, 924, 1617, 1665
Sau3AI GATC 8 cut(s) 54, 160, 169, 719, 1159, 1247, 1326, 1954
Sau96I GGNCC 8 cut(s) 317, 546, 746, 761, 821, 1170, 1386, 2073
SchI GAGTC 3 cut(s) 497, 914, 1528
ScrFI CCNGG 9 cut(s) 181, 498, 846, 870, 941, 1331, 1451, 2060, 2077
SduI GDGCHC 3 cut(s) 47, 987, 1277
SexAI ACCWGGT 1 cut(s) 868
SfcI CTRYAG 3 cut(s) 289, 351, 519
SgrAI CRCCGGYG 1 cut(s) 122
SinI GGWCC 6 cut(s) 546, 761, 821, 1170, 1386, 2073
SmiMI CAYNNNNRTG 2 cut(s) 555, 1844
SmlI CTYRAG 2 cut(s) 71, 1711
SmoI CTYRAG 2 cut(s) 71, 1711
SpeI ACTAGT 1 cut(s) 1133
Sse9I AATT 9 cut(s) 674, 930, 1021, 1267, 1368, 1678, 1944, 1977, 2107
SsiI CCGC 6 cut(s) 30, 120, 924, 1544, 1617, 1664
SspI AATATT 2 cut(s) 1213, 2083
SspMI CTAG 7 cut(s) 200, 707, 765, 773, 909, 1002, 1134
SstI GAGCTC 3 cut(s) 47, 987, 1277
StyD4I CCNGG 9 cut(s) 179, 496, 844, 868, 939, 1329, 1449, 2058, 2075
StyI CCWWGG 4 cut(s) 764, 1380, 1490, 1725
TaiI ACGT 3 cut(s) 738, 888, 1909
TaqI TCGA 4 cut(s) 83, 273, 666, 2138
TaqII GACCGA 1 cut(s) 567
TasI AATT 9 cut(s) 674, 930, 1021, 1267, 1368, 1678, 1944, 1977, 2107
TatI WGTACW 1 cut(s) 966
TauI GCSGC 4 cut(s) 33, 926, 1619, 1667
Tru1I TTAA 5 cut(s) 732, 1122, 1209, 1947, 2030
Tru9I TTAA 5 cut(s) 732, 1122, 1209, 1947, 2030
TscAI CASTG 4 cut(s) 685, 1155, 1171, 1892
TseFI GTSAC 1 cut(s) 944
TseI GCWGC 3 cut(s) 137, 340, 353
Tsp45I GTSAC 1 cut(s) 944
TspDTI ATGAA 6 cut(s) 17, 1221, 1280, 1365, 1664, 1788
TspGWI ACGGA 1 cut(s) 121
TspRI CASTG 4 cut(s) 685, 1155, 1171, 1892
VpaK11BI GGWCC 6 cut(s) 546, 761, 821, 1170, 1386, 2073
VspI ATTAAT 2 cut(s) 1209, 1947
XagI CCTNNNNNAGG 1 cut(s) 843
XapI RAATTY 3 cut(s) 674, 1021, 2107
XceI RCATGY 3 cut(s) 566, 1843, 1849
XmaJI CCTAGG 1 cut(s) 764
XmiI GTMKAC 1 cut(s) 1499
XmnI GAANNNNTTC 1 cut(s) 1977
XspI CTAG 7 cut(s) 200, 707, 765, 773, 909, 1002, 1134
Zsp2I ATGCAT 1 cut(s) 2014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.