Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004269

Physical Location & Seq

Genomic Coordinates Forward (+)

42872254 .. 42885508

Gene Structure 13255 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1317100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGAAGTACGTGTTGGTTACAGGAGGGGTGGTCAGTGGGCTGGGCAAAGGCGTCACCGCCAGCAGCATCGGCGTCGTCCTCAAAGCCTGCGGCCTTCGCGTCACCTCCATCAAAATCGATCCATACTTGAACACAGATGCTGGCACCATGTCTCCCTTTGAGCATGGTGAGGTTTTTGTGCTTGACGACGGCGGAGAGGTTGATTTGGACCTGGGCAACTATGAGCGCTTCCTAGATGTAACTCTTACTAGGGATAACAACATTACCACTGGCAAGATATATCAGTCTGTTCTTGAGAAGGAGCGGAGAGGTGATTACCTTGGCAAGACTGTTCAGGTGGTTCCACACATAACTGACGCCATTAAGACATGGATTGAATCCGTTTCAGTCATTCCTGTGGATGGAAAAGAGGGCCCTGCAGATGTTTGCGTGATAGAGTTGGGAGGGACTGTCGGTGACATTGAATCAATGCCATTCATTGAGGCTCTGCGCCAATTGTCCTTTTCAGTTGGGCAAGAGAACTTCTGTCTTATTCATGTGAGCCTGATACCAGTGCTGGGTGTTGTTGGAGAGCAAAAAACAAAGCCTACACAACATAGTGTGCGGGAACTAAGAGCATTAGGTTTGACTCCTCATCTATTAGCATGTCGCTCTGCAGAGCCTTTGTTGGAAAATACTAAGCAGAAACTTTCACAATTTTGTCATGTTACAGCTGGTAATATTCTTAATATCCACGATGTACCAAACATTTGGCACGTTCCTCTCTTACTTAGGAATCAAAACGCTCATCATTCAATTCTTCAACAACTAAATCTACTAAGCATTGCCATGCCTCCTGATTTAAGAGATTGGACCAAGATGGCAGAGACTTACGATAACCTCACCAATTCTGTGAGGATTGCCATGGTGGGGAAGTATGTGGGCCTTGCAGATTCTTACTTGTCCGTAGTAAAGGCCCTTCTGCATGCTTGTGTTGCTTGTTCTTTAAAGCCATCAATTGACTGGATTGCTGCTTCTGACCTTGAAGATGATAGTGCCAAACTGATACCAGAAGCACATGCTGCTGCATGGGGGACCCTGAAGAATGCAGCATGTGTCTTGGTTCCTGGTGGATTTGGAGATCGTGGTGTGAGAGGTATGATATTAGCTGCAAAGTATGCCAGAGAGAACAATGTTCCTTATCTCGGGATTTGTTTGGGCATGCAGATTTCAGTGATTGAATTTGCGAGATCTGTTTTGGGTTTAGAAAGGGCAGACAGCACAGAGTTTAATGCACAGACACCGAATCCTGTTGTAATTTTTATGCCTGAGGGATCAAGAACACACATGGGAAGCACAATGAGACTGGGATCCAGAAGAACACTTTTCCAAGCTCCTGATTGCACTACTTCAAAGCTGTACCATAACTCAGAGTATGTGGATGAACGCCACAGGCACAGATATGAGGTGAACCCAGATGTTATTGGAGTTCTTGAAGAAGCTGGCCTGAAATTTGTAGGGAAGGATAACAGTGGGAGACGAATGGAGATTTTAGAGCTTCCAAGTCATCCATTCTATGTAGGAGTGCAATTTCATCCAGAATTTAAATCACGGCCTGGGAGGCCCTCTCCTCTATTTTTAGGTCTTATCTTGGCAGCAACAGGACAGTTGGAAACATATCTTGACCAGAATCAAAATTCTAGTTTGACAGCATTGGATCTCTCTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

570

Amino Acids

62.27

Weight (kDa)

5.92

Isoelectric Point (pI)

45.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	5.4e-124	CTP synthase N-terminus
GATase	PF00117	310 - 543	5.7e-40	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004269)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02120 AT4G02120 AT4G02120 AT4G02120 AT4G02120
fragaria_vesca	FvH4_5g39590 FvH4_5g39590 FvH4_5g39590 FvH4_5g39590 FvH4_5g39590
malus_domestica	MD03G1297300.v1.1 MD11G1317100.v1.1 MD13G1111200.v1.1
prunus_persica	Prupe.5G049900_v2.0.a1 Prupe.8G269700_v2.0.a1 Prupe.8G269700_v2.0.a1
pyrus_communis	pycom03g23580 pycom11g27670
rosa_chinensis	RchiOBHm_Chr7g0241901
rosa_laevigata	RLG00000000531 RLG00000027970
rosa_multiflora	Rmu_sc0001865.1_g000001 Rmu_sc0038379.1_g000001
rosa_roxburghii	Rroxscaffold_1G00035060 Rroxscaffold_3G00218500
rosa_rugosa	Rorug07G0348500
rosa_samantha	Rh4DG282600 Rh7AG502600 Rh7BG473900 Rh7CG519300
rosa_wichuraiana	Rw4G024320 Rw7G042500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	143
AccBSI	CCGCTC	1 cut(s)	304
AccII	CGCG	1 cut(s)	99
AciI	CCGC	5 cut(s)	57, 90, 192, 304, 604
AclWI	GGATC	5 cut(s)	113, 1321, 1344, 1357, 1704
AcsI	RAATTY	4 cut(s)	1220, 1490, 1580, 1675
AcuI	CTGAAG	1 cut(s)	1100
AcyI	GRCGYC	3 cut(s)	51, 72, 357
AfaI	GTAC	3 cut(s)	8, 741, 1400
AfeI	AGCGCT	1 cut(s)	227
AfiI	CCNNNNNNNGG	4 cut(s)	401, 557, 909, 1184
AflIII	ACRYGT	1 cut(s)	9
AgsI	TTSAA	9 cut(s)	130, 377, 464, 795, 803, 1025, 1220, 1392, 1475
AjnI	CCWGG	3 cut(s)	210, 1105, 1594
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	6 cut(s)	713, 1148, 1373, 1396, 1481, 1537
AluI	AGCT	6 cut(s)	713, 1148, 1373, 1396, 1481, 1537
Alw26I	GTCTC	4 cut(s)	156, 860, 1336, 1510
AlwI	GGATC	5 cut(s)	113, 1321, 1344, 1357, 1704
AlwNI	CAGNNNCTG	1 cut(s)	140
Ama87I	CYCGRG	1 cut(s)	1184
Aor51HI	AGCGCT	1 cut(s)	227
AoxI	GGCC	7 cut(s)	91, 412, 922, 954, 1483, 1592, 1601
ApaI	GGGCCC	1 cut(s)	416
ApeKI	GCWGC	7 cut(s)	63, 1010, 1061, 1064, 1088, 1148, 1634
ApoI	RAATTY	4 cut(s)	1220, 1490, 1580, 1675
AspLEI	GCGC	2 cut(s)	228, 492
AspS9I	GGNCC	8 cut(s)	208, 412, 413, 852, 922, 955, 1074, 1602
AsuHPI	GGTGA	7 cut(s)	46, 94, 179, 323, 467, 874, 1459
AvaI	CYCGRG	1 cut(s)	1184
AvaII	GGWCC	3 cut(s)	208, 852, 1074
AxyI	CCTNAGG	1 cut(s)	1308
BaeGI	GKGCMC	1 cut(s)	416
BamHI	GGATCC	1 cut(s)	1349
BanI	GGYRCC	1 cut(s)	143
BanII	GRGCYC	1 cut(s)	416
BarI	GAAGNNNNNNTAC	2 cut(s)	942, 974
BbvI	GCAGC	7 cut(s)	75, 997, 1048, 1051, 1100, 1135, 1646
BccI	CCATC	4 cut(s)	116, 395, 853, 1000
BceAI	ACGGC	2 cut(s)	205, 1607
BcgI	CGANNNNNNTGC	2 cut(s)	55, 89
BciT130I	CCWGG	3 cut(s)	212, 1107, 1596
BcoDI	GTCTC	4 cut(s)	156, 860, 1336, 1510
BfaI	CTAG	3 cut(s)	233, 249, 1680
BfmI	CTRYAG	2 cut(s)	417, 654
BfoI	RGCGCY	1 cut(s)	229
BglI	GCCNNNNNGGC	1 cut(s)	1600
BglII	AGATCT	1 cut(s)	1229
BisI	GCNGC	8 cut(s)	64, 91, 1011, 1062, 1065, 1089, 1149, 1635
BlsI	GCNGC	8 cut(s)	65, 92, 1012, 1063, 1066, 1090, 1150, 1636
Bme1390I	CCNGG	3 cut(s)	212, 1107, 1596
Bme18I	GGWCC	3 cut(s)	208, 852, 1074
BmeT110I	CYCGRG	1 cut(s)	1184
BmgT120I	GGNCC	8 cut(s)	208, 412, 413, 852, 922, 955, 1074, 1602
BmiI	GGNNCC	7 cut(s)	145, 342, 414, 1075, 1076, 1104, 1351
BmrFI	CCNGG	3 cut(s)	212, 1107, 1596
BmrI	ACTGGG	1 cut(s)	1355
BmsI	GCATC	2 cut(s)	75, 127
BmuI	ACTGGG	1 cut(s)	1355
BplI	GAGNNNNNCTC	2 cut(s)	1591, 1623
BpuEI	CTTGAG	1 cut(s)	314
Bsa29I	ATCGAT	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	10
BsaHI	GRCGYC	3 cut(s)	51, 72, 357
BsaJI	CCNNGG	4 cut(s)	211, 319, 903, 1595
BsaXI	ACNNNNNCTCC	6 cut(s)	15, 45, 136, 166, 435, 465
Bsc4I	CCNNNNNNNGG	4 cut(s)	401, 557, 909, 1184
Bse1I	ACTGG	4 cut(s)	274, 551, 1007, 1350
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	1 cut(s)	822
BseBI	CCWGG	3 cut(s)	212, 1107, 1596
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	4 cut(s)	211, 319, 903, 1595
BseGI	GGATG	4 cut(s)	406, 1426, 1546, 1573
BseLI	CCNNNNNNNGG	4 cut(s)	401, 557, 909, 1184
BseMI	GCAATG	1 cut(s)	822
BseMII	CTCAG	2 cut(s)	1299, 1422
BseNI	ACTGG	4 cut(s)	274, 551, 1007, 1350
BseRI	GAGGAG	2 cut(s)	621, 1599
BseSI	GKGCMC	1 cut(s)	416
BseXI	GCAGC	7 cut(s)	75, 997, 1048, 1051, 1100, 1135, 1646
BseYI	CCCAGC	2 cut(s)	40, 556
Bsh1236I	CGCG	1 cut(s)	99
BshFI	GGCC	7 cut(s)	93, 414, 924, 956, 1485, 1594, 1603
BshNI	GGYRCC	1 cut(s)	143
BshVI	ATCGAT	1 cut(s)	117
BsiHKCI	CYCGRG	1 cut(s)	1184
BslFI	GGGAC	2 cut(s)	460, 1087
BslI	CCNNNNNNNGG	4 cut(s)	401, 557, 909, 1184
BsmAI	GTCTC	4 cut(s)	156, 860, 1336, 1510
BsmBI	CGTCTC	1 cut(s)	1510
BsmFI	GGGAC	2 cut(s)	460, 1087
BsmI	GAATGC	1 cut(s)	1090
BsnI	GGCC	7 cut(s)	93, 414, 924, 956, 1485, 1594, 1603
BsoBI	CYCGRG	1 cut(s)	1184
Bsp120I	GGGCCC	1 cut(s)	412
Bsp1286I	GDGCHC	1 cut(s)	416
Bsp143I	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
Bsp19I	CCATGG	1 cut(s)	903
BspACI	CCGC	5 cut(s)	57, 90, 192, 304, 604
BspANI	GGCC	7 cut(s)	93, 414, 924, 956, 1485, 1594, 1603
BspCNI	CTCAG	2 cut(s)	1300, 1421
BspDI	ATCGAT	1 cut(s)	117
BspFNI	CGCG	1 cut(s)	99
BspLI	GGNNCC	7 cut(s)	145, 342, 414, 1075, 1076, 1104, 1351
BspMAI	CTGCAG	2 cut(s)	421, 658
BspPI	GGATC	5 cut(s)	113, 1321, 1344, 1357, 1704
BspT107I	GGYRCC	1 cut(s)	143
BsrBI	CCGCTC	1 cut(s)	304
BsrDI	GCAATG	1 cut(s)	822
BsrI	ACTGG	4 cut(s)	274, 551, 1007, 1350
BssECI	CCNNGG	4 cut(s)	211, 319, 903, 1595
BssMI	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
BssNI	GRCGYC	3 cut(s)	51, 72, 357
BssT1I	CCWWGG	2 cut(s)	319, 903
Bst2UI	CCWGG	3 cut(s)	212, 1107, 1596
Bst4CI	ACNGT	4 cut(s)	331, 451, 1511, 1647
BstACI	GRCGYC	3 cut(s)	51, 72, 357
BstAPI	GCANNNNNTGC	2 cut(s)	1061, 1157
BstBAI	YACGTR	1 cut(s)	10
BstC8I	GCNNGC	6 cut(s)	61, 88, 142, 966, 1202, 1483
BstDEI	CTNAG	6 cut(s)	611, 678, 770, 818, 1308, 1408
BstDSI	CCRYGG	1 cut(s)	903
BstF5I	GGATG	4 cut(s)	406, 1426, 1546, 1573
BstFNI	CGCG	1 cut(s)	99
BstH2I	RGCGCY	1 cut(s)	229
BstHHI	GCGC	2 cut(s)	228, 492
BstKTI	GATC	6 cut(s)	121, 1123, 1232, 1316, 1352, 1699
BstMAI	GTCTC	4 cut(s)	156, 860, 1336, 1510
BstMBI	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
BstMWI	GCNNNNNNNGC	6 cut(s)	69, 96, 974, 1061, 1157, 1600
BstNI	CCWGG	3 cut(s)	212, 1107, 1596
BstNSI	RCATGY	5 cut(s)	648, 968, 1061, 1095, 1204
BstSCI	CCNGG	3 cut(s)	210, 1105, 1594
BstSFI	CTRYAG	2 cut(s)	417, 654
BstSLI	GKGCMC	1 cut(s)	416
BstUI	CGCG	1 cut(s)	99
BstV1I	GCAGC	7 cut(s)	75, 997, 1048, 1051, 1100, 1135, 1646
BstX2I	RGATCY	3 cut(s)	1229, 1349, 1696
BstXI	CCANNNNNNTGG	1 cut(s)	750
BstYI	RGATCY	3 cut(s)	1229, 1349, 1696
Bsu15I	ATCGAT	1 cut(s)	117
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuRI	GGCC	7 cut(s)	93, 414, 924, 956, 1485, 1594, 1603
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	4 cut(s)	406, 1426, 1546, 1573
BtsIMutI	CAGTG	5 cut(s)	40, 267, 558, 1218, 1516
Cac8I	GCNNGC	6 cut(s)	61, 88, 142, 966, 1202, 1483
CaiI	CAGNNNCTG	1 cut(s)	140
CfoI	GCGC	2 cut(s)	228, 492
Cfr13I	GGNCC	8 cut(s)	208, 412, 413, 852, 922, 955, 1074, 1602
ClaI	ATCGAT	1 cut(s)	117
CseI	GACGC	4 cut(s)	40, 61, 88, 365
Csp6I	GTAC	3 cut(s)	7, 740, 1399
CviQI	GTAC	3 cut(s)	7, 740, 1399
DdeI	CTNAG	6 cut(s)	611, 678, 770, 818, 1308, 1408
DpnI	GATC	6 cut(s)	120, 1122, 1231, 1315, 1351, 1698
DpnII	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
DraI	TTTAAA	2 cut(s)	987, 1585
EciI	GGCGGA	1 cut(s)	207
Eco130I	CCWWGG	2 cut(s)	319, 903
Eco24I	GRGCYC	1 cut(s)	416
Eco47I	GGWCC	3 cut(s)	208, 852, 1074
Eco47III	AGCGCT	1 cut(s)	227
Eco57I	CTGAAG	1 cut(s)	1100
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	1 cut(s)	1184
EcoO109I	RGGNCCY	5 cut(s)	412, 413, 955, 1074, 1602
EcoRII	CCWGG	3 cut(s)	210, 1105, 1594
EcoT14I	CCWWGG	2 cut(s)	319, 903
EcoT38I	GRGCYC	1 cut(s)	416
ErhI	CCWWGG	2 cut(s)	319, 903
Esp3I	CGTCTC	1 cut(s)	1510
FaqI	GGGAC	2 cut(s)	460, 1087
FauI	CCCGC	1 cut(s)	597
Fnu4HI	GCNGC	8 cut(s)	64, 91, 1011, 1062, 1065, 1089, 1149, 1635
FokI	GGATG	4 cut(s)	413, 1433, 1533, 1560
FriOI	GRGCYC	1 cut(s)	416
Fsp4HI	GCNGC	8 cut(s)	64, 91, 1011, 1062, 1065, 1089, 1149, 1635
FspBI	CTAG	3 cut(s)	233, 249, 1680
GlaI	GCGC	2 cut(s)	227, 491
GluI	GCNGC	8 cut(s)	64, 91, 1011, 1062, 1065, 1089, 1149, 1635
GsaI	CCCAGC	2 cut(s)	44, 560
HaeII	RGCGCY	1 cut(s)	229
HaeIII	GGCC	7 cut(s)	93, 414, 924, 956, 1485, 1594, 1603
HgaI	GACGC	4 cut(s)	40, 61, 88, 365
HhaI	GCGC	2 cut(s)	228, 492
Hin1I	GRCGYC	3 cut(s)	51, 72, 357
Hin6I	GCGC	2 cut(s)	226, 490
HinP1I	GCGC	2 cut(s)	226, 490
HinfI	GANTC	7 cut(s)	377, 464, 628, 775, 932, 1285, 1669
HphI	GGTGA	7 cut(s)	46, 94, 179, 323, 467, 874, 1459
Hpy166II	GTNNAC	1 cut(s)	1450
Hpy188I	TCNGA	2 cut(s)	1018, 1411
Hpy188III	TCNNGA	9 cut(s)	293, 836, 1186, 1317, 1353, 1376, 1472, 1577, 1661
Hpy8I	GTNNAC	1 cut(s)	1450
Hpy99I	CGWCG	2 cut(s)	77, 191
HpyAV	CCTTC	4 cut(s)	104, 292, 968, 1495
HpyCH4III	ACNGT	4 cut(s)	331, 451, 1511, 1647
HpyCH4IV	ACGT	2 cut(s)	9, 756
HpyF10VI	GCNNNNNNNGC	6 cut(s)	69, 96, 974, 1061, 1157, 1600
HpyF3I	CTNAG	6 cut(s)	611, 678, 770, 818, 1308, 1408
HpySE526I	ACGT	2 cut(s)	9, 756
Hsp92I	GRCGYC	3 cut(s)	51, 72, 357
HspAI	GCGC	2 cut(s)	226, 490
KflI	GGGWCCC	1 cut(s)	1074
Kzo9I	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
LmnI	GCTCC	2 cut(s)	301, 1378
Lsp1109I	GCAGC	7 cut(s)	75, 997, 1048, 1051, 1100, 1135, 1646
LweI	GCATC	2 cut(s)	75, 127
MaeI	CTAG	3 cut(s)	233, 249, 1680
MaeII	ACGT	2 cut(s)	9, 756
MaeIII	GTNAC	6 cut(s)	16, 52, 100, 238, 455, 706
MalI	GATC	6 cut(s)	120, 1122, 1231, 1315, 1351, 1698
MbiI	CCGCTC	1 cut(s)	304
MboI	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
MboII	GAAGA	5 cut(s)	791, 1037, 1093, 1368, 1487
MfeI	CAATTG	2 cut(s)	494, 996
MflI	RGATCY	3 cut(s)	1229, 1349, 1696
MhlI	GDGCHC	1 cut(s)	416
MlyI	GAGTC	1 cut(s)	622
MmeI	TCCRAC	3 cut(s)	547, 648, 1629
MseI	TTAA	6 cut(s)	363, 726, 842, 986, 1269, 1584
MslI	CAYNNNNRTG	4 cut(s)	395, 827, 969, 1440
MspA1I	CMGCKG	1 cut(s)	713
MspR9I	CCNGG	3 cut(s)	212, 1107, 1596
MunI	CAATTG	2 cut(s)	494, 996
Mva1269I	GAATGC	1 cut(s)	1090
MvaI	CCWGG	3 cut(s)	212, 1107, 1596
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	6 cut(s)	69, 96, 974, 1061, 1157, 1600
NcoI	CCATGG	1 cut(s)	903
NdeII	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
NlaIV	GGNNCC	7 cut(s)	145, 342, 414, 1075, 1076, 1104, 1351
NmuCI	GTSAC	3 cut(s)	52, 100, 455
NspI	RCATGY	5 cut(s)	648, 968, 1061, 1095, 1204
PaeI	GCATGC	2 cut(s)	968, 1204
PctI	GAATGC	1 cut(s)	1090
PfeI	GAWTC	6 cut(s)	377, 464, 775, 932, 1285, 1669
PkrI	GCNGC	8 cut(s)	65, 92, 1012, 1063, 1066, 1090, 1150, 1636
PleI	GAGTC	1 cut(s)	622
PpsI	GAGTC	1 cut(s)	622
Ppu21I	YACGTR	1 cut(s)	10
PpuMI	RGGWCCY	1 cut(s)	1074
Psp5II	RGGWCCY	1 cut(s)	1074
Psp6I	CCWGG	3 cut(s)	210, 1105, 1594
PspFI	CCCAGC	2 cut(s)	40, 556
PspGI	CCWGG	3 cut(s)	210, 1105, 1594
PspN4I	GGNNCC	7 cut(s)	145, 342, 414, 1075, 1076, 1104, 1351
PspOMI	GGGCCC	1 cut(s)	412
PspPI	GGNCC	8 cut(s)	208, 412, 413, 852, 922, 955, 1074, 1602
PspPPI	RGGWCCY	1 cut(s)	1074
PstI	CTGCAG	2 cut(s)	421, 658
PstNI	CAGNNNCTG	1 cut(s)	140
PsuI	RGATCY	3 cut(s)	1229, 1349, 1696
PvuII	CAGCTG	1 cut(s)	713
RsaI	GTAC	3 cut(s)	8, 741, 1400
RsaNI	GTAC	3 cut(s)	7, 740, 1399
RseI	CAYNNNNRTG	4 cut(s)	395, 827, 969, 1440
SaqAI	TTAA	6 cut(s)	363, 726, 842, 986, 1269, 1584
SatI	GCNGC	8 cut(s)	64, 91, 1011, 1062, 1065, 1089, 1149, 1635
Sau3AI	GATC	6 cut(s)	118, 1120, 1229, 1313, 1349, 1696
Sau96I	GGNCC	8 cut(s)	208, 412, 413, 852, 922, 955, 1074, 1602
SchI	GAGTC	1 cut(s)	622
ScrFI	CCNGG	3 cut(s)	212, 1107, 1596
SduI	GDGCHC	1 cut(s)	416
SfaNI	GCATC	2 cut(s)	75, 127
SfcI	CTRYAG	2 cut(s)	417, 654
SfiI	GGCCNNNNNGGCC	1 cut(s)	1600
SinI	GGWCC	3 cut(s)	208, 852, 1074
SmiI	ATTTAAAT	1 cut(s)	1585
SmiMI	CAYNNNNRTG	4 cut(s)	395, 827, 969, 1440
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SphI	GCATGC	2 cut(s)	968, 1204
SsiI	CCGC	5 cut(s)	57, 90, 192, 304, 604
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	3 cut(s)	233, 249, 1680
StyD4I	CCNGG	3 cut(s)	210, 1105, 1594
StyI	CCWWGG	2 cut(s)	319, 903
SwaI	ATTTAAAT	1 cut(s)	1585
TaaI	ACNGT	4 cut(s)	331, 451, 1511, 1647
TaiI	ACGT	2 cut(s)	12, 759
TaqI	TCGA	1 cut(s)	117
TauI	GCSGC	1 cut(s)	93
TfiI	GAWTC	6 cut(s)	377, 464, 775, 932, 1285, 1669
Tru1I	TTAA	6 cut(s)	363, 726, 842, 986, 1269, 1584
Tru9I	TTAA	6 cut(s)	363, 726, 842, 986, 1269, 1584
TscAI	CASTG	5 cut(s)	40, 274, 558, 1218, 1516
TseFI	GTSAC	3 cut(s)	52, 100, 455
TseI	GCWGC	7 cut(s)	63, 1010, 1061, 1064, 1088, 1148, 1634
Tsp45I	GTSAC	3 cut(s)	52, 100, 455
TspDTI	ATGAA	5 cut(s)	17, 466, 524, 1437, 1562
TspGWI	ACGGA	2 cut(s)	370, 934
TspRI	CASTG	5 cut(s)	40, 274, 558, 1218, 1516
VpaK11BI	GGWCC	3 cut(s)	208, 852, 1074
XapI	RAATTY	4 cut(s)	1220, 1490, 1580, 1675
XceI	RCATGY	5 cut(s)	648, 968, 1061, 1095, 1204
XcmI	CCANNNNNNNNNTGG	1 cut(s)	999
XspI	CTAG	3 cut(s)	233, 249, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.