Rh7AG502600

Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
70190781 .. 70196673
5893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG502600.1

Sequence Viewer

Length: 1539 bp
ATGTCTCCCTTTGAACACGGCGAGGTTTTTGTTCTTGATGATGGTGGAGAGGTTGATTTAGACCTGGGTAACTACGAACGCTTCGTAGATGTGACTCTTACTAGGGACAACAACATTACGACGGGCAAGATATATCAGTCGGTCCTTGACAAGGAGCGGAGAGGAGATTATCTTGGAAAGACTGTGCAGGTAGTTCCACACATCACCGATGCCATCAAAAATTGGATTGAATCTGTTTCTCTCATTCCTGTGGATGGAAAAGAGGGCCCTGCAGATGTTTGTGTTATAGAGTTGGGCGGAACTGTGGGGGACATTGAATCAATGCCATTCATTGAGGCTCTTCGGCAGTTGTCTTTTTCGGTCGGGCAAGAAGACTTCTGTCTTATCCATGTGAGCCTGATACCGGTACTGGGTGTTGTAGGAGAGCAAAAAACAAAGCCTACACAACATAGTGTGCGGGAGCTAAGAGCATTAGGCTTGACTCCTCATCTATTAGCATGTCGCTCCGCGCAGCCTTTATTGGAAAATACGAAGCAGAAACTTTCACAATTTTGTCATGTTGCAGCTGGTAATATTCTTAATATTCATGATGTTCCAAACATCTGGCATATCCCTCTCTTACTTAGGAACCAAAATGCTCATCGGTCGATTCTTCAACAACTTAATTTACTAAGCATTGCTACACTTCCTGATTTGAGAGATTGGACCAAGATGGCAGAGACTTATGATAATCTCACCAATTCTGTCAGGATTGCCATGGTGGGAAAGTATGTTGGCCTCACAGATTCATATCTGTCTGTAGTGAAGGCCCTTTTGCATGCTTGCATTGCATGTTCTCTAAAGCCAGAAATTGACTGGATTGCTGCTTCGGACCTTGAAGATGATAGTGCTAAAATGACACCAGAAGCACATGCTGCTGCGTGGGAGACTTTAAGGAATGCAGCTTGTGTCTTGGTTCCTGGCGGATTTGGTGATCGTGGTGTACGAGGTATGATCTTGGCTGCAAAATATGCCAGAGAAAACAATGTTCCTTATCTTGGGATATGTTTGGGGATGCAGATATCTGTGATTGAGTTTGCTAGAGCTGTTTTGGGTCTGGAAAGGGCAGACAGCACCGAGTTTGATGCACAAACACCCAATCCTGTTGTAATTTTCATGCCTGAGGGTTCAAGAACACATATGGGAAGCACAATGAGATTAGGATCGAGAAGAACACTTTTCCAAACTCCTGATTGCATTACTTCAAAACTGTATCATAACTCAAAGTATGTTGATGAACGGCATCGGCATAGATATGAGGTAAACCCAGATGTCATTGGAATTCTTGAAGAAGCTGGCCTAAAATTTGTAGGGAAGGATGACAGCGGAAGAAGAATGGAGATTTTAGAGCTTCCAAGTCATCCATTCTATATAGGAGTGCAATTTCATCCAGAATTTAAATCAAGGCCTAGGAGGCCCTCAGCTCCTTTTCTAGGTCTTATCTTGGCAGCAACAGGGCAGTTGGAAGCGTATCTTAGTGGGAATCAAAGCAATAGTTGA

Protein Analysis

512

Amino Acids

56.7

Weight (kDa)

5.8

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_synth_N PF06418 1 - 223 4.7e-94 CTP synthase N-terminus
GATase PF00117 260 - 493 6.9e-39 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 178
AccBSI CCGCTC 1 cut(s) 157
AccII CGCG 1 cut(s) 509
AciI CCGC 6 cut(s) 157, 297, 457, 507, 963, 1365
AclWI GGATC 1 cut(s) 1210
AcsI RAATTY 3 cut(s) 1320, 1343, 1433
AfaI GTAC 2 cut(s) 408, 984
AfiI CCNNNNNNNGG 6 cut(s) 151, 254, 403, 410, 1037, 1472
AgeI ACCGGT 1 cut(s) 403
AgsI TTSAA 8 cut(s) 14, 230, 317, 656, 878, 1170, 1245, 1328
AjnI CCWGG 2 cut(s) 63, 958
AluBI AGCT 7 cut(s) 463, 566, 944, 1085, 1334, 1390, 1463
AluI AGCT 7 cut(s) 463, 566, 944, 1085, 1334, 1390, 1463
Alw26I GTCTC 3 cut(s) 9, 713, 920
AlwI GGATC 1 cut(s) 1210
AoxI GGCC 6 cut(s) 265, 775, 807, 1336, 1445, 1454
ApaI GGGCCC 1 cut(s) 269
ApeKI GCWGC 8 cut(s) 511, 563, 863, 914, 917, 941, 1001, 1487
ApoI RAATTY 3 cut(s) 1320, 1343, 1433
AsiGI ACCGGT 1 cut(s) 403
AspA2I CCTAGG 1 cut(s) 1448
AspLEI GCGC 1 cut(s) 511
AspS9I GGNCC 7 cut(s) 142, 265, 266, 705, 808, 871, 1455
AsuHPI GGTGA 3 cut(s) 196, 727, 983
AvaII GGWCC 3 cut(s) 142, 705, 871
AvrII CCTAGG 1 cut(s) 1448
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 1 cut(s) 269
BanII GRGCYC 1 cut(s) 269
BbsI GAAGAC 1 cut(s) 378
BbvCI CCTCAGC 1 cut(s) 1459
BbvI GCAGC 8 cut(s) 523, 575, 850, 901, 904, 953, 988, 1499
BccI CCATC 4 cut(s) 35, 221, 248, 706
BceAI ACGGC 2 cut(s) 34, 1295
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 2 cut(s) 65, 960
BcoDI GTCTC 3 cut(s) 9, 713, 920
BfaI CTAG 4 cut(s) 102, 1080, 1449, 1472
BfmI CTRYAG 2 cut(s) 270, 798
BfuAI ACCTGC 1 cut(s) 178
BglI GCCNNNNNGGC 1 cut(s) 1453
BisI GCNGC 8 cut(s) 512, 564, 864, 915, 918, 942, 1002, 1488
BlnI CCTAGG 1 cut(s) 1448
BlsI GCNGC 8 cut(s) 513, 565, 865, 916, 919, 943, 1003, 1489
Bme1390I CCNGG 2 cut(s) 65, 960
Bme18I GGWCC 3 cut(s) 142, 705, 871
BmgT120I GGNCC 7 cut(s) 142, 265, 266, 705, 808, 871, 1455
BmiI GGNNCC 3 cut(s) 267, 629, 957
BmrFI CCNGG 2 cut(s) 65, 960
BmrI ACTGGG 1 cut(s) 419
BmsI GCATC 4 cut(s) 199, 1044, 1114, 1291
BmuI ACTGGG 1 cut(s) 419
BoxI GACNNNNGTC 1 cut(s) 378
BpiI GAAGAC 1 cut(s) 378
Bpu10I CCTNAGC 1 cut(s) 1459
BsaBI GATNNNNATC 2 cut(s) 789, 1201
BsaJI CCNNGG 3 cut(s) 64, 756, 1448
BsaWI WCCGGW 1 cut(s) 403
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 254, 403, 410, 1037, 1472
Bse118I RCCGGY 1 cut(s) 403
Bse1I ACTGG 2 cut(s) 414, 860
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 2 cut(s) 675, 825
Bse8I GATNNNNATC 2 cut(s) 789, 1201
BseBI CCWGG 2 cut(s) 65, 960
BseDI CCNNGG 3 cut(s) 64, 756, 1448
BseGI GGATG 5 cut(s) 259, 1059, 1363, 1399, 1426
BseJI GATNNNNATC 2 cut(s) 789, 1201
BseLI CCNNNNNNNGG 6 cut(s) 151, 254, 403, 410, 1037, 1472
BseMI GCAATG 2 cut(s) 675, 825
BseMII CTCAG 2 cut(s) 1152, 1473
BseNI ACTGG 2 cut(s) 414, 860
BseRI GAGGAG 2 cut(s) 177, 474
BseSI GKGCMC 1 cut(s) 269
BseXI GCAGC 8 cut(s) 523, 575, 850, 901, 904, 953, 988, 1499
BsgI GTGCAG 1 cut(s) 206
Bsh1236I CGCG 1 cut(s) 509
Bsh1285I CGRYCG 2 cut(s) 363, 647
BshFI GGCC 6 cut(s) 267, 777, 809, 1338, 1447, 1456
BshTI ACCGGT 1 cut(s) 403
BsiEI CGRYCG 2 cut(s) 363, 647
BsiSI CCGG 1 cut(s) 404
BslFI GGGAC 2 cut(s) 119, 323
BslI CCNNNNNNNGG 6 cut(s) 151, 254, 403, 410, 1037, 1472
BsmAI GTCTC 3 cut(s) 9, 713, 920
BsmFI GGGAC 2 cut(s) 119, 323
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 6 cut(s) 267, 777, 809, 1338, 1447, 1456
Bsp120I GGGCCC 1 cut(s) 265
Bsp1286I GDGCHC 1 cut(s) 269
Bsp143I GATC 3 cut(s) 973, 993, 1202
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 6 cut(s) 157, 297, 457, 507, 963, 1365
BspANI GGCC 6 cut(s) 267, 777, 809, 1338, 1447, 1456
BspCNI CTCAG 2 cut(s) 1153, 1472
BspFNI CGCG 1 cut(s) 509
BspHI TCATGA 1 cut(s) 586
BspLI GGNNCC 3 cut(s) 267, 629, 957
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 178
BspPI GGATC 1 cut(s) 1210
BspQI GCTCTTC 1 cut(s) 345
BsrBI CCGCTC 1 cut(s) 157
BsrDI GCAATG 2 cut(s) 675, 825
BsrFI RCCGGY 1 cut(s) 403
BsrI ACTGG 2 cut(s) 414, 860
BssAI RCCGGY 1 cut(s) 403
BssECI CCNNGG 3 cut(s) 64, 756, 1448
BssMI GATC 3 cut(s) 973, 993, 1202
BssT1I CCWWGG 2 cut(s) 756, 1448
Bst2UI CCWGG 2 cut(s) 65, 960
Bst4CI ACNGT 3 cut(s) 184, 304, 1251
Bst6I CTCTTC 1 cut(s) 345
BstAPI GCANNNNNTGC 2 cut(s) 914, 1010
BstC8I GCNNGC 3 cut(s) 819, 823, 1336
BstDEI CTNAG 6 cut(s) 464, 623, 671, 1161, 1459, 1514
BstDSI CCRYGG 1 cut(s) 756
BstENI CCTNNNNNAGG 2 cut(s) 149, 1470
BstF5I GGATG 5 cut(s) 259, 1059, 1363, 1399, 1426
BstFNI CGCG 1 cut(s) 509
BstHHI GCGC 1 cut(s) 511
BstKTI GATC 3 cut(s) 976, 996, 1205
BstMAI GTCTC 3 cut(s) 9, 713, 920
BstMBI GATC 3 cut(s) 973, 993, 1202
BstMCI CGRYCG 2 cut(s) 363, 647
BstMWI GCNNNNNNNGC 4 cut(s) 827, 914, 1010, 1453
BstNI CCWGG 2 cut(s) 65, 960
BstNSI RCATGY 4 cut(s) 501, 821, 834, 914
BstPAI GACNNNNGTC 1 cut(s) 378
BstSCI CCNGG 2 cut(s) 63, 958
BstSFI CTRYAG 2 cut(s) 270, 798
BstSLI GKGCMC 1 cut(s) 269
BstUI CGCG 1 cut(s) 509
BstV1I GCAGC 8 cut(s) 523, 575, 850, 901, 904, 953, 988, 1499
BstV2I GAAGAC 1 cut(s) 378
BstXI CCANNNNNNTGG 1 cut(s) 603
Bsu36I CCTNAGG 1 cut(s) 1161
BsuRI GGCC 6 cut(s) 267, 777, 809, 1338, 1447, 1456
BtgI CCRYGG 1 cut(s) 756
BtsCI GGATG 5 cut(s) 259, 1059, 1363, 1399, 1426
BveI ACCTGC 1 cut(s) 178
Cac8I GCNNGC 3 cut(s) 819, 823, 1336
CciI TCATGA 1 cut(s) 586
CfoI GCGC 1 cut(s) 511
Cfr10I RCCGGY 1 cut(s) 403
Cfr13I GGNCC 7 cut(s) 142, 265, 266, 705, 808, 871, 1455
Csp6I GTAC 2 cut(s) 407, 983
CspAI ACCGGT 1 cut(s) 403
CviAII CATG 9 cut(s) 389, 498, 557, 587, 757, 818, 831, 911, 1156
CviQI GTAC 2 cut(s) 407, 983
DdeI CTNAG 6 cut(s) 464, 623, 671, 1161, 1459, 1514
DpnI GATC 3 cut(s) 975, 995, 1204
DpnII GATC 3 cut(s) 973, 993, 1202
DraI TTTAAA 1 cut(s) 1438
Eam1104I CTCTTC 1 cut(s) 345
EarI CTCTTC 1 cut(s) 345
EciI GGCGGA 2 cut(s) 312, 978
Eco130I CCWWGG 2 cut(s) 756, 1448
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 1 cut(s) 269
Eco32I GATATC 1 cut(s) 1062
Eco47I GGWCC 3 cut(s) 142, 705, 871
Eco81I CCTNAGG 1 cut(s) 1161
EcoNI CCTNNNNNAGG 2 cut(s) 149, 1470
EcoO109I RGGNCCY 4 cut(s) 265, 266, 808, 1455
EcoRI GAATTC 1 cut(s) 1320
EcoRII CCWGG 2 cut(s) 63, 958
EcoRV GATATC 1 cut(s) 1062
EcoT14I CCWWGG 2 cut(s) 756, 1448
EcoT38I GRGCYC 1 cut(s) 269
ErhI CCWWGG 2 cut(s) 756, 1448
FaeI CATG 9 cut(s) 392, 501, 560, 590, 760, 821, 834, 914, 1159
FalI AAGNNNNNCTT 2 cut(s) 1497, 1529
FaqI GGGAC 2 cut(s) 119, 323
FatI CATG 9 cut(s) 388, 497, 556, 586, 756, 817, 830, 910, 1155
FauI CCCGC 1 cut(s) 450
FauNDI CATATG 1 cut(s) 1179
Fnu4HI GCNGC 8 cut(s) 512, 564, 864, 915, 918, 942, 1002, 1488
FokI GGATG 5 cut(s) 266, 1066, 1370, 1386, 1413
FriOI GRGCYC 1 cut(s) 269
Fsp4HI GCNGC 8 cut(s) 512, 564, 864, 915, 918, 942, 1002, 1488
FspBI CTAG 4 cut(s) 102, 1080, 1449, 1472
GlaI GCGC 1 cut(s) 510
GluI GCNGC 8 cut(s) 512, 564, 864, 915, 918, 942, 1002, 1488
HaeIII GGCC 6 cut(s) 267, 777, 809, 1338, 1447, 1456
HapII CCGG 1 cut(s) 404
HhaI GCGC 1 cut(s) 511
Hin1II CATG 9 cut(s) 392, 501, 560, 590, 760, 821, 834, 914, 1159
Hin6I GCGC 1 cut(s) 509
HinP1I GCGC 1 cut(s) 509
HinfI GANTC 7 cut(s) 94, 230, 317, 481, 649, 785, 1522
HpaII CCGG 1 cut(s) 404
HphI GGTGA 3 cut(s) 196, 727, 983
Hpy166II GTNNAC 2 cut(s) 983, 1303
Hpy188I TCNGA 1 cut(s) 871
Hpy8I GTNNAC 2 cut(s) 983, 1303
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 2 cut(s) 799, 1348
HpyCH4III ACNGT 3 cut(s) 184, 304, 1251
HpyF10VI GCNNNNNNNGC 4 cut(s) 827, 914, 1010, 1453
HpyF3I CTNAG 6 cut(s) 464, 623, 671, 1161, 1459, 1514
Hsp92II CATG 9 cut(s) 392, 501, 560, 590, 760, 821, 834, 914, 1159
HspAI GCGC 1 cut(s) 509
Kzo9I GATC 3 cut(s) 973, 993, 1202
LguI GCTCTTC 1 cut(s) 345
LmnI GCTCC 4 cut(s) 154, 460, 509, 1468
Lsp1109I GCAGC 8 cut(s) 523, 575, 850, 901, 904, 953, 988, 1499
LweI GCATC 4 cut(s) 199, 1044, 1114, 1291
MaeI CTAG 4 cut(s) 102, 1080, 1449, 1472
MaeIII GTNAC 2 cut(s) 68, 91
MalI GATC 3 cut(s) 975, 995, 1204
MbiI CCGCTC 1 cut(s) 157
MboI GATC 3 cut(s) 973, 993, 1202
MboII GAAGA 8 cut(s) 332, 383, 644, 890, 1221, 1340, 1380, 1383
MhlI GDGCHC 1 cut(s) 269
MlyI GAGTC 2 cut(s) 88, 475
MmeI TCCRAC 1 cut(s) 1482
MseI TTAA 4 cut(s) 579, 663, 932, 1437
MslI CAYNNNNRTG 2 cut(s) 248, 1293
MspA1I CMGCKG 2 cut(s) 566, 1365
MspI CCGG 1 cut(s) 404
MspR9I CCNGG 2 cut(s) 65, 960
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 2 cut(s) 65, 960
MvnI CGCG 1 cut(s) 509
MwoI GCNNNNNNNGC 4 cut(s) 827, 914, 1010, 1453
NcoI CCATGG 1 cut(s) 756
NdeI CATATG 1 cut(s) 1179
NdeII GATC 3 cut(s) 973, 993, 1202
NlaIII CATG 9 cut(s) 392, 501, 560, 590, 760, 821, 834, 914, 1159
NlaIV GGNNCC 3 cut(s) 267, 629, 957
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 4 cut(s) 501, 821, 834, 914
PaeI GCATGC 1 cut(s) 821
PagI TCATGA 1 cut(s) 586
PceI AGGCCT 1 cut(s) 1447
PciSI GCTCTTC 1 cut(s) 345
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 982
PctI GAATGC 1 cut(s) 943
PfeI GAWTC 5 cut(s) 230, 317, 649, 785, 1522
PinAI ACCGGT 1 cut(s) 403
PkrI GCNGC 8 cut(s) 513, 565, 865, 916, 919, 943, 1003, 1489
PleI GAGTC 2 cut(s) 88, 475
PpsI GAGTC 2 cut(s) 88, 475
PshAI GACNNNNGTC 1 cut(s) 378
Psp6I CCWGG 2 cut(s) 63, 958
PspGI CCWGG 2 cut(s) 63, 958
PspN4I GGNNCC 3 cut(s) 267, 629, 957
PspOMI GGGCCC 1 cut(s) 265
PspPI GGNCC 7 cut(s) 142, 265, 266, 705, 808, 871, 1455
PstI CTGCAG 1 cut(s) 274
PvuII CAGCTG 1 cut(s) 566
RsaI GTAC 2 cut(s) 408, 984
RsaNI GTAC 2 cut(s) 407, 983
RseI CAYNNNNRTG 2 cut(s) 248, 1293
SapI GCTCTTC 1 cut(s) 345
SaqAI TTAA 4 cut(s) 579, 663, 932, 1437
SatI GCNGC 8 cut(s) 512, 564, 864, 915, 918, 942, 1002, 1488
Sau3AI GATC 3 cut(s) 973, 993, 1202
Sau96I GGNCC 7 cut(s) 142, 265, 266, 705, 808, 871, 1455
SchI GAGTC 2 cut(s) 88, 475
ScrFI CCNGG 2 cut(s) 65, 960
SduI GDGCHC 1 cut(s) 269
SfaNI GCATC 4 cut(s) 199, 1044, 1114, 1291
SfcI CTRYAG 2 cut(s) 270, 798
SfiI GGCCNNNNNGGCC 1 cut(s) 1453
SinI GGWCC 3 cut(s) 142, 705, 871
SmiI ATTTAAAT 1 cut(s) 1438
SmiMI CAYNNNNRTG 2 cut(s) 248, 1293
SphI GCATGC 1 cut(s) 821
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 6 cut(s) 157, 297, 457, 507, 963, 1365
SspI AATATT 2 cut(s) 574, 583
SspMI CTAG 4 cut(s) 102, 1080, 1449, 1472
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 2 cut(s) 63, 958
StyI CCWWGG 2 cut(s) 756, 1448
SwaI ATTTAAAT 1 cut(s) 1438
TaaI ACNGT 3 cut(s) 184, 304, 1251
TaqI TCGA 2 cut(s) 647, 1205
TaqII GACCGA 3 cut(s) 130, 349, 633
TfiI GAWTC 5 cut(s) 230, 317, 649, 785, 1522
Tru1I TTAA 4 cut(s) 579, 663, 932, 1437
Tru9I TTAA 4 cut(s) 579, 663, 932, 1437
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 8 cut(s) 511, 563, 863, 914, 917, 941, 1001, 1487
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 6 cut(s) 319, 575, 777, 1144, 1290, 1415
VpaK11BI GGWCC 3 cut(s) 142, 705, 871
XagI CCTNNNNNAGG 2 cut(s) 149, 1470
XapI RAATTY 3 cut(s) 1320, 1343, 1433
XceI RCATGY 4 cut(s) 501, 821, 834, 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 852
XmaJI CCTAGG 1 cut(s) 1448
XspI CTAG 4 cut(s) 102, 1080, 1449, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.