Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0006840

Physical Location & Seq

Genomic Coordinates Reverse (-)

10352602 .. 10356175

Gene Structure 3574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1084400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGAAAATAAAGGAAATGGAAGAATTGGAGAAAGAAGCTCAGCGGCTGAAATCTCTAGCCGAGGCCAAATACAAAGACTCCAACGTCAAATCAGCCCTCAAATATGCAAAACGTGCCGAGCGCCTGTGCCCAAGCATGGAAGGTATCTCCTCCATGGTCACTGCCTTAAAGATCATCCATACGGCCTCCAAAAGCCCCAATCCCGACTGGTACAAGGTCTTGCAGGTGGAGCCCTTTGCTCACATCAACACCATTAAGAAGAACTACAAGAAGTTCGCGTTTCTTCTCCACCCTGATAAGAATCCTCATGCCGGTTCCGAAGAGGCTTTCAAACTCGTCAACGAGGCCGTTAGGTTCCTTTCTGACAAGCTTAGGAGGAAGGAGTATGATATGAAACTCAGGATTAGGATTCAGGATGAGAAGATAAAAGAAAGTGGTGTTGGGGGTTTAGGTTCGAGTATGGGGGTGGAGAGTGACACCTTTTGGACTGCCTGTTCGACGTGCCGGCTTTTGCACCAGTTTGAGAGGAGGTATTTGGGGCATAATTTGGTTTGCCCAAGTTGTAGGAAGAGCTTTAAGGCTCTGGAGGTTGAAAGTGGTGAGAATGCCAAGATTAGGACTAGTGAGAGATTAAGGAAAGCGAGTTTGGCATCAAAAGGGGGAATGAGTAGTGAAGGATTGGGGAGGAGAGTGAGTGACAGTGGTGAAATAAATGGTGGTACTGGTGGGAGAAGGAAAAGTGATGGGTTGCAGAGGAAGGGTGAAGTAGGTACAGGAGATTTAGACAGTCAAGTGAGTGCTGGGAGAAGGAAGAGAGGTATTTTGGAGAGGAAAGGTGAAGGGGCTACTGGGGATGTGGATTGTCAAGTTACCTGTGGTGATGCTGGTGAACTGAGTAGTTTGAGGTTGAGGAGGAGAATGAGTAGTGTTGGAGAGGTGATGGAGAGGTCTAAACCAAAGAAGGCAAAAACCGGTGATGAAATGATGACATTGGCAGAAATTAAGCAAAAGGTCCGAGAGGGGAAGTTGAAGATGAAGGACAAGGAGGATGAAAGAGATAAGAAAGAGAAGAGGGAGAGGCTGAGGCATGAAAATTTAAAGAAGGGTAAGAATTTAGAGGTTGAGAGATGCGCTGCTTCAAAGAAGAAGGATTTAGAAAGTGATAAAAGTAAGGGCACGTCAATAGAGAAGTGCAGGGGGTCCAAGAGTGGGGATCTGGAAATTATGGTGGTAGAGGATTCAGATTTTTATGATTTTGATAAGGATAGAGTGGGGAGGAGTTTTGAGAAAGGGCAGGTTTGGGCTATATACGATGATGATGACGGAATGCCAAGGCTTTATGGTTTGATTGATGAGGTTGTTTCTGTCAAACCTTTTGAGGTGAAAATGAGTTGGTTGGATCTTCAGAATAATAGTGATGAGTGGCTTGCCTCTTCAGAGAAAATGGGATTCCATGTGTCTTGTGGGAGGTTTAAAGTTTCCAGAAAGACTTCAATTAATTCATTGAATATATTCTCTCATCTCGTGGATTGTGAAAGGGTGGCAAGAGAGATTTATCATATTTATCCGAAGAAGGGGTCAGTGTGGGCGTTTTATAATGAAGCAGCTTTGGATGCAGAGGGAAGAAACTGGTCTGTTAAAGACAAGCGGTGTTACGACATAGTTGTGTTTCTGACAACTTATAGTGAGATGTACAGTATGAGTATAGGTTATCTTGAGAAGGTTGATGGGCTCAAGACAGTATTTAAGAGAAGGGAGATCGGGTCTCATGCTGTTAGGTTGCTAGAAACCAGTGATGTTAGGTTGGCTTCACACCAAATACCTTCTAGGAAGCTCTCGGGTGATGAGGCTCCAAACATTTTCAAAGACTGCTGGGAACTTGATCCTGCTTCTCTTTCTCCGGATTTACTTACATTTGGTTCTGGAAGATATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

646

Amino Acids

73.02

Weight (kDa)

9.2

Isoelectric Point (pI)

41.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	69 - 130	2.4e-18	DnaJ domain
Zn_ribbon_20	PF23551	161 - 194	2.7e-06	Zinc beta-ribbon domain
DUF3444	PF11926	408 - 616	3.6e-64	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006840)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35540
fragaria_vesca	FvH4_5g23220 FvH4_5g23220
malus_domestica	MD12G1084400.v1.1 MD14G1079000.v1.1 MD14G1079100.v1.1
prunus_persica	Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1
pyrus_communis	pycom12g07150 pycom14g06770
rosa_chinensis	RchiOBHm_Chr7g0212151
rosa_laevigata	RLG00000002922
rosa_multiflora	Rmu_co8425879.1_g000001 Rmu_sc0002283.1_g000051 Rmu_sc0013167.1_g000010
rosa_roxburghii	Rroxscaffold_3G00247070
rosa_rugosa	Rorug07G0131600
rosa_samantha	Rh7AG264500 Rh7BG258400 Rh7CG281000 Rh7DG270900
rosa_wichuraiana	Rw7G022580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1596
AarI	CACCTGC	1 cut(s)	214
AasI	GACNNNNNNGTC	1 cut(s)	83
Acc36I	ACCTGC	2 cut(s)	214, 1285
AccII	CGCG	1 cut(s)	278
AccIII	TCCGGA	1 cut(s)	1900
AciI	CCGC	2 cut(s)	43, 1648
AclWI	GGATC	3 cut(s)	1221, 1407, 1877
AcsI	RAATTY	2 cut(s)	1093, 1111
AcuI	CTGAAG	2 cut(s)	1388, 1419
AfaI	GTAC	4 cut(s)	212, 721, 772, 1694
AfiI	CCNNNNNNNGG	5 cut(s)	136, 311, 615, 1209, 1574
AgeI	ACCGGT	1 cut(s)	971
AgsI	TTSAA	7 cut(s)	331, 593, 1030, 1140, 1494, 1507, 1864
AhlI	ACTAGT	1 cut(s)	620
AjiI	CACGTC	2 cut(s)	501, 1179
AjuI	GAANNNNNNNTTGG	4 cut(s)	423, 455, 629, 661
AloI	GAACNNNNNNTCC	2 cut(s)	478, 510
AluBI	AGCT	5 cut(s)	38, 370, 573, 1607, 1834
AluI	AGCT	5 cut(s)	38, 370, 573, 1607, 1834
Alw26I	GTCTC	1 cut(s)	1770
AlwI	GGATC	3 cut(s)	1221, 1407, 1877
AlwNI	CAGNNNCTG	1 cut(s)	46
Ama87I	CYCGRG	1 cut(s)	1837
Aor13HI	TCCGGA	1 cut(s)	1900
AoxI	GGCC	3 cut(s)	63, 183, 345
ApeKI	GCWGC	2 cut(s)	1133, 1604
ApoI	RAATTY	2 cut(s)	1093, 1111
ArsI	GACNNNNNNTTYG	4 cut(s)	478, 510, 1562, 1594
AseI	ATTAAT	1 cut(s)	1497
AsiGI	ACCGGT	1 cut(s)	971
Asp700I	GAANNNNTTC	2 cut(s)	1489, 1511
AspLEI	GCGC	2 cut(s)	123, 1133
AspS9I	GGNCC	2 cut(s)	1012, 1200
AvaI	CYCGRG	1 cut(s)	1837
AvaII	GGWCC	2 cut(s)	1012, 1200
BaeGI	GKGCMC	2 cut(s)	131, 1178
BanII	GRGCYC	2 cut(s)	234, 1734
BauI	CACGAG	1 cut(s)	1523
BbvCI	CCTCAGC	1 cut(s)	1082
BbvI	GCAGC	2 cut(s)	1120, 1616
BccI	CCATC	3 cut(s)	737, 934, 1721
BceAI	ACGGC	2 cut(s)	198, 332
BcoDI	GTCTC	1 cut(s)	1770
BcuI	ACTAGT	1 cut(s)	620
BfaI	CTAG	4 cut(s)	56, 621, 1784, 1827
BfoI	RGCGCY	1 cut(s)	124
BfuAI	ACCTGC	2 cut(s)	214, 1285
BisI	GCNGC	3 cut(s)	44, 1134, 1605
BlpI	GCTNAGC	1 cut(s)	39
BlsI	GCNGC	3 cut(s)	45, 1135, 1606
Bme18I	GGWCC	2 cut(s)	1012, 1200
BmeT110I	CYCGRG	1 cut(s)	1837
BmgBI	CACGTC	2 cut(s)	501, 1179
BmgT120I	GGNCC	2 cut(s)	1012, 1200
BmiI	GGNNCC	5 cut(s)	231, 316, 356, 1201, 1851
BmrI	ACTGGG	1 cut(s)	858
BmsI	GCATC	4 cut(s)	659, 871, 1118, 1603
BmuI	ACTGGG	1 cut(s)	858
BpmI	CTGGAG	1 cut(s)	605
Bpu10I	CCTNAGC	2 cut(s)	371, 1082
Bpu1102I	GCTNAGC	1 cut(s)	39
BpuEI	CTTGAG	2 cut(s)	1718, 1736
BsaBI	GATNNNNATC	1 cut(s)	300
BsaI	GGTCTC	1 cut(s)	1770
BsaJI	CCNNGG	3 cut(s)	60, 153, 1331
BsaWI	WCCGGW	2 cut(s)	971, 1900
BsaXI	ACNNNNNCTCC	8 cut(s)	62, 92, 679, 709, 907, 937, 1748, 1778
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 311, 615, 1209, 1574
Bse118I	RCCGGY	3 cut(s)	311, 504, 971
Bse1I	ACTGG	6 cut(s)	212, 517, 727, 853, 1634, 1791
Bse8I	GATNNNNATC	1 cut(s)	300
BseAI	TCCGGA	1 cut(s)	1900
BseDI	CCNNGG	3 cut(s)	60, 153, 1331
BseGI	GGATG	5 cut(s)	174, 421, 859, 1054, 1618
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	5 cut(s)	136, 311, 615, 1209, 1574
BseMII	CTCAG	4 cut(s)	53, 412, 884, 1073
BseNI	ACTGG	6 cut(s)	212, 517, 727, 853, 1634, 1791
BseRI	GAGGAG	6 cut(s)	139, 541, 700, 925, 928, 1291
BseSI	GKGCMC	2 cut(s)	131, 1178
BseXI	GCAGC	2 cut(s)	1120, 1616
BseYI	CCCAGC	2 cut(s)	800, 1872
BsgI	GTGCAG	1 cut(s)	1213
Bsh1236I	CGCG	1 cut(s)	278
BshFI	GGCC	3 cut(s)	65, 185, 347
BshTI	ACCGGT	1 cut(s)	971
BsiHKCI	CYCGRG	1 cut(s)	1837
BsiSI	CCGG	4 cut(s)	312, 505, 972, 1901
BslI	CCNNNNNNNGG	5 cut(s)	136, 311, 615, 1209, 1574
BsmAI	GTCTC	1 cut(s)	1770
BsmI	GAATGC	2 cut(s)	610, 1332
BsnI	GGCC	3 cut(s)	65, 185, 347
Bso31I	GGTCTC	1 cut(s)	1770
BsoBI	CYCGRG	1 cut(s)	1837
Bsp1286I	GDGCHC	4 cut(s)	131, 234, 1178, 1734
Bsp13I	TCCGGA	1 cut(s)	1900
Bsp1407I	TGTACA	1 cut(s)	1692
Bsp143I	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
Bsp1720I	GCTNAGC	1 cut(s)	39
Bsp19I	CCATGG	1 cut(s)	153
BspACI	CCGC	2 cut(s)	43, 1648
BspANI	GGCC	3 cut(s)	65, 185, 347
BspCNI	CTCAG	4 cut(s)	52, 411, 885, 1074
BspEI	TCCGGA	1 cut(s)	1900
BspFNI	CGCG	1 cut(s)	278
BspLI	GGNNCC	5 cut(s)	231, 316, 356, 1201, 1851
BspMI	ACCTGC	2 cut(s)	214, 1285
BspPI	GGATC	3 cut(s)	1221, 1407, 1877
BspQI	GCTCTTC	1 cut(s)	563
BspTNI	GGTCTC	1 cut(s)	1770
BsrFI	RCCGGY	3 cut(s)	311, 504, 971
BsrGI	TGTACA	1 cut(s)	1692
BsrI	ACTGG	6 cut(s)	212, 517, 727, 853, 1634, 1791
BssAI	RCCGGY	3 cut(s)	311, 504, 971
BssECI	CCNNGG	3 cut(s)	60, 153, 1331
BssMI	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
BssSI	CACGAG	1 cut(s)	1523
BssT1I	CCWWGG	2 cut(s)	153, 1331
Bst2BI	CACGAG	1 cut(s)	1523
Bst4CI	ACNGT	4 cut(s)	701, 788, 1697, 1741
Bst6I	CTCTTC	5 cut(s)	315, 563, 806, 1064, 1438
BstAPI	GCANNNNNTGC	1 cut(s)	113
BstAUI	TGTACA	1 cut(s)	1692
BstC8I	GCNNGC	2 cut(s)	506, 1428
BstDEI	CTNAG	5 cut(s)	39, 371, 398, 893, 1082
BstDSI	CCRYGG	1 cut(s)	153
BstF5I	GGATG	5 cut(s)	174, 421, 859, 1054, 1618
BstFNI	CGCG	1 cut(s)	278
BstH2I	RGCGCY	1 cut(s)	124
BstHHI	GCGC	2 cut(s)	123, 1133
BstKTI	GATC	5 cut(s)	174, 1216, 1402, 1761, 1885
BstMAI	GTCTC	1 cut(s)	1770
BstMBI	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
BstMWI	GCNNNNNNNGC	4 cut(s)	113, 229, 647, 1613
BstSLI	GKGCMC	2 cut(s)	131, 1178
BstUI	CGCG	1 cut(s)	278
BstV1I	GCAGC	2 cut(s)	1120, 1616
BstX2I	RGATCY	2 cut(s)	1213, 1399
BstYI	RGATCY	2 cut(s)	1213, 1399
BsuRI	GGCC	3 cut(s)	65, 185, 347
BtgI	CCRYGG	1 cut(s)	153
BtrI	CACGTC	2 cut(s)	501, 1179
BtsCI	GGATG	5 cut(s)	174, 421, 859, 1054, 1618
BtsI	GCAGTG	1 cut(s)	159
BtsIMutI	CAGTG	4 cut(s)	159, 706, 1587, 1798
BveI	ACCTGC	2 cut(s)	214, 1285
Cac8I	GCNNGC	2 cut(s)	506, 1428
CaiI	CAGNNNCTG	1 cut(s)	46
CfoI	GCGC	2 cut(s)	123, 1133
Cfr10I	RCCGGY	3 cut(s)	311, 504, 971
Cfr13I	GGNCC	2 cut(s)	1012, 1200
Csp6I	GTAC	4 cut(s)	211, 720, 771, 1693
CspAI	ACCGGT	1 cut(s)	971
CviAII	CATG	6 cut(s)	136, 154, 308, 1088, 1454, 1769
CviQI	GTAC	4 cut(s)	211, 720, 771, 1693
DdeI	CTNAG	5 cut(s)	39, 371, 398, 893, 1082
DpnI	GATC	5 cut(s)	173, 1215, 1401, 1760, 1884
DpnII	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
DraI	TTTAAA	2 cut(s)	1098, 1474
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
Eam1104I	CTCTTC	5 cut(s)	315, 563, 806, 1064, 1438
EarI	CTCTTC	5 cut(s)	315, 563, 806, 1064, 1438
Eco130I	CCWWGG	2 cut(s)	153, 1331
Eco24I	GRGCYC	2 cut(s)	234, 1734
Eco31I	GGTCTC	1 cut(s)	1770
Eco47I	GGWCC	2 cut(s)	1012, 1200
Eco57I	CTGAAG	2 cut(s)	1388, 1419
Eco88I	CYCGRG	1 cut(s)	1837
EcoT14I	CCWWGG	2 cut(s)	153, 1331
EcoT38I	GRGCYC	2 cut(s)	234, 1734
ErhI	CCWWGG	2 cut(s)	153, 1331
FaeI	CATG	6 cut(s)	139, 157, 311, 1091, 1457, 1772
FatI	CATG	6 cut(s)	135, 153, 307, 1087, 1453, 1768
Fnu4HI	GCNGC	3 cut(s)	44, 1134, 1605
FokI	GGATG	5 cut(s)	161, 428, 866, 1061, 1625
FriOI	GRGCYC	2 cut(s)	234, 1734
Fsp4HI	GCNGC	3 cut(s)	44, 1134, 1605
FspBI	CTAG	4 cut(s)	56, 621, 1784, 1827
GlaI	GCGC	2 cut(s)	122, 1132
GluI	GCNGC	3 cut(s)	44, 1134, 1605
GsaI	CCCAGC	2 cut(s)	804, 1876
GsuI	CTGGAG	1 cut(s)	605
HaeII	RGCGCY	1 cut(s)	124
HaeIII	GGCC	3 cut(s)	65, 185, 347
HapII	CCGG	4 cut(s)	312, 505, 972, 1901
HhaI	GCGC	2 cut(s)	123, 1133
Hin1II	CATG	6 cut(s)	139, 157, 311, 1091, 1457, 1772
Hin6I	GCGC	2 cut(s)	121, 1131
HinP1I	GCGC	2 cut(s)	121, 1131
HincII	GTYRAC	1 cut(s)	340
HindII	GTYRAC	1 cut(s)	340
HindIII	AAGCTT	1 cut(s)	368
HinfI	GANTC	5 cut(s)	77, 301, 409, 1238, 1449
HpaII	CCGG	4 cut(s)	312, 505, 972, 1901
Hpy166II	GTNNAC	2 cut(s)	340, 890
Hpy188I	TCNGA	8 cut(s)	319, 364, 1016, 1243, 1407, 1438, 1569, 1674
Hpy8I	GTNNAC	2 cut(s)	340, 890
Hpy99I	CGWCG	1 cut(s)	502
HpyCH4III	ACNGT	4 cut(s)	701, 788, 1697, 1741
HpyCH4IV	ACGT	4 cut(s)	84, 112, 500, 1178
HpyCH4V	TGCA	6 cut(s)	107, 223, 514, 751, 1194, 1616
HpyF10VI	GCNNNNNNNGC	4 cut(s)	113, 229, 647, 1613
HpyF3I	CTNAG	5 cut(s)	39, 371, 398, 893, 1082
HpySE526I	ACGT	4 cut(s)	84, 112, 500, 1178
Hsp92II	CATG	6 cut(s)	139, 157, 311, 1091, 1457, 1772
HspAI	GCGC	2 cut(s)	121, 1131
Kpn2I	TCCGGA	1 cut(s)	1900
KroI	GCCGGC	1 cut(s)	504
KroNI	GCCGGC	1 cut(s)	506
Kzo9I	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
LguI	GCTCTTC	1 cut(s)	563
LmnI	GCTCC	2 cut(s)	229, 1855
Lsp1109I	GCAGC	2 cut(s)	1120, 1616
LweI	GCATC	4 cut(s)	659, 871, 1118, 1603
MaeI	CTAG	4 cut(s)	56, 621, 1784, 1827
MaeII	ACGT	4 cut(s)	84, 112, 500, 1178
MaeIII	GTNAC	5 cut(s)	157, 473, 695, 868, 1652
MalI	GATC	5 cut(s)	173, 1215, 1401, 1760, 1884
MboI	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
MflI	RGATCY	2 cut(s)	1213, 1399
MhlI	GDGCHC	4 cut(s)	131, 234, 1178, 1734
MluCI	AATT	8 cut(s)	23, 544, 999, 1093, 1111, 1221, 1494, 1498
MlyI	GAGTC	1 cut(s)	71
MmeI	TCCRAC	3 cut(s)	105, 910, 1377
MroI	TCCGGA	1 cut(s)	1900
MroNI	GCCGGC	1 cut(s)	504
MroXI	GAANNNNTTC	2 cut(s)	1489, 1511
MslI	CAYNNNNRTG	1 cut(s)	1664
MspA1I	CMGCKG	1 cut(s)	43
MspI	CCGG	4 cut(s)	312, 505, 972, 1901
Mva1269I	GAATGC	2 cut(s)	610, 1332
MvnI	CGCG	1 cut(s)	278
MwoI	GCNNNNNNNGC	4 cut(s)	113, 229, 647, 1613
NaeI	GCCGGC	1 cut(s)	506
NcoI	CCATGG	1 cut(s)	153
NdeII	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
NgoMIV	GCCGGC	1 cut(s)	504
NlaIII	CATG	6 cut(s)	139, 157, 311, 1091, 1457, 1772
NlaIV	GGNNCC	5 cut(s)	231, 316, 356, 1201, 1851
NmeAIII	GCCGAG	2 cut(s)	85, 142
NmuCI	GTSAC	3 cut(s)	157, 473, 695
PaqCI	CACCTGC	1 cut(s)	214
PciSI	GCTCTTC	1 cut(s)	563
PctI	GAATGC	2 cut(s)	610, 1332
PdiI	GCCGGC	1 cut(s)	506
PdmI	GAANNNNTTC	2 cut(s)	1489, 1511
PfeI	GAWTC	4 cut(s)	301, 409, 1238, 1449
PinAI	ACCGGT	1 cut(s)	971
PkrI	GCNGC	3 cut(s)	45, 1135, 1606
PleI	GAGTC	1 cut(s)	71
PpsI	GAGTC	1 cut(s)	71
PshBI	ATTAAT	1 cut(s)	1497
PsiI	TTATAA	1 cut(s)	1596
PspFI	CCCAGC	2 cut(s)	800, 1872
PspN4I	GGNNCC	5 cut(s)	231, 316, 356, 1201, 1851
PspPI	GGNCC	2 cut(s)	1012, 1200
PstNI	CAGNNNCTG	1 cut(s)	46
PsuI	RGATCY	2 cut(s)	1213, 1399
RsaI	GTAC	4 cut(s)	212, 721, 772, 1694
RsaNI	GTAC	4 cut(s)	211, 720, 771, 1693
RseI	CAYNNNNRTG	1 cut(s)	1664
SapI	GCTCTTC	1 cut(s)	563
SatI	GCNGC	3 cut(s)	44, 1134, 1605
Sau3AI	GATC	5 cut(s)	171, 1213, 1399, 1758, 1882
Sau96I	GGNCC	2 cut(s)	1012, 1200
SchI	GAGTC	1 cut(s)	71
SduI	GDGCHC	4 cut(s)	131, 234, 1178, 1734
SfaNI	GCATC	4 cut(s)	659, 871, 1118, 1603
SinI	GGWCC	2 cut(s)	1012, 1200
SmiMI	CAYNNNNRTG	1 cut(s)	1664
SmlI	CTYRAG	2 cut(s)	1715, 1733
SmoI	CTYRAG	2 cut(s)	1715, 1733
SpeI	ACTAGT	1 cut(s)	620
Sse9I	AATT	8 cut(s)	23, 544, 999, 1093, 1111, 1221, 1494, 1498
SsiI	CCGC	2 cut(s)	43, 1648
SspMI	CTAG	4 cut(s)	56, 621, 1784, 1827
StyI	CCWWGG	2 cut(s)	153, 1331
TaaI	ACNGT	4 cut(s)	701, 788, 1697, 1741
TaiI	ACGT	4 cut(s)	87, 115, 503, 1181
TaqI	TCGA	2 cut(s)	455, 497
TasI	AATT	8 cut(s)	23, 544, 999, 1093, 1111, 1221, 1494, 1498
TatI	WGTACW	1 cut(s)	1692
TauI	GCSGC	1 cut(s)	46
TfiI	GAWTC	4 cut(s)	301, 409, 1238, 1449
TscAI	CASTG	4 cut(s)	166, 706, 1587, 1798
TseFI	GTSAC	3 cut(s)	157, 473, 695
TseI	GCWGC	2 cut(s)	1133, 1604
Tsp45I	GTSAC	3 cut(s)	157, 473, 695
TspDTI	ATGAA	8 cut(s)	17, 407, 993, 1049, 1065, 1104, 1491, 1614
TspGWI	ACGGA	1 cut(s)	1338
TspRI	CASTG	4 cut(s)	166, 706, 1587, 1798
VpaK11BI	GGWCC	2 cut(s)	1012, 1200
VspI	ATTAAT	1 cut(s)	1497
XapI	RAATTY	2 cut(s)	1093, 1111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1460
XmnI	GAANNNNTTC	2 cut(s)	1489, 1511
XspI	CTAG	4 cut(s)	56, 621, 1784, 1827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.