Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35540 |
| fragaria_vesca | FvH4_5g23220 FvH4_5g23220 |
| malus_domestica | MD12G1084400.v1.1 MD14G1079000.v1.1 MD14G1079100.v1.1 |
| prunus_persica | Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 Prupe.8G141600_v2.0.a1 |
| pyrus_communis | pycom12g07150 pycom14g06770 |
| rosa_chinensis | RchiOBHm_Chr7g0212151 |
| rosa_laevigata | RLG00000002922 |
| rosa_multiflora | Rmu_co8425879.1_g000001 Rmu_sc0002283.1_g000051 Rmu_sc0013167.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00247070 |
| rosa_rugosa | Rorug07G0131600 |
| rosa_samantha | Rh7AG264500 Rh7BG258400 Rh7CG281000 Rh7DG270900 |
| rosa_wichuraiana | Rw7G022580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1467 |
| AarI | CACCTGC | 1 cut(s) | 79 |
| Acc36I | ACCTGC | 2 cut(s) | 79, 1156 |
| AccII | CGCG | 2 cut(s) | 143, 999 |
| AccIII | TCCGGA | 1 cut(s) | 1771 |
| AclWI | GGATC | 3 cut(s) | 1092, 1278, 1748 |
| AcsI | RAATTY | 2 cut(s) | 961, 979 |
| AcuI | CTGAAG | 2 cut(s) | 1259, 1290 |
| AfaI | GTAC | 4 cut(s) | 77, 586, 637, 712 |
| AfeI | AGCGCT | 1 cut(s) | 1520 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 176, 480, 1445 |
| AgeI | ACCGGT | 1 cut(s) | 176 |
| AgsI | TTSAA | 7 cut(s) | 196, 458, 895, 1025, 1365, 1378, 1606 |
| AhlI | ACTAGT | 1 cut(s) | 485 |
| AjiI | CACGTC | 1 cut(s) | 366 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 288, 320, 494, 526 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 343, 375 |
| AluBI | AGCT | 3 cut(s) | 438, 1478, 1705 |
| AluI | AGCT | 3 cut(s) | 438, 1478, 1705 |
| Alw26I | GTCTC | 2 cut(s) | 988, 1641 |
| AlwI | GGATC | 3 cut(s) | 1092, 1278, 1748 |
| Ama87I | CYCGRG | 1 cut(s) | 1708 |
| Aor13HI | TCCGGA | 1 cut(s) | 1771 |
| Aor51HI | AGCGCT | 1 cut(s) | 1520 |
| AoxI | GGCC | 2 cut(s) | 48, 210 |
| ApeKI | GCWGC | 2 cut(s) | 1001, 1475 |
| ApoI | RAATTY | 2 cut(s) | 961, 979 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 343, 375, 1433, 1465 |
| AseI | ATTAAT | 1 cut(s) | 1368 |
| AsiGI | ACCGGT | 1 cut(s) | 176 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1360, 1382 |
| AspLEI | GCGC | 3 cut(s) | 1001, 1462, 1521 |
| AspS9I | GGNCC | 1 cut(s) | 877 |
| AvaI | CYCGRG | 1 cut(s) | 1708 |
| AvaII | GGWCC | 1 cut(s) | 877 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BauI | CACGAG | 1 cut(s) | 1394 |
| BbvCI | CCTCAGC | 2 cut(s) | 944, 950 |
| BbvI | GCAGC | 2 cut(s) | 988, 1487 |
| BccI | CCATC | 3 cut(s) | 799, 1187, 1592 |
| BceAI | ACGGC | 2 cut(s) | 63, 197 |
| BcoDI | GTCTC | 2 cut(s) | 988, 1641 |
| BcuI | ACTAGT | 1 cut(s) | 485 |
| BfaI | CTAG | 2 cut(s) | 486, 1698 |
| BfoI | RGCGCY | 2 cut(s) | 1463, 1522 |
| BfuAI | ACCTGC | 2 cut(s) | 79, 1156 |
| BisI | GCNGC | 2 cut(s) | 1002, 1476 |
| BlsI | GCNGC | 2 cut(s) | 1003, 1477 |
| Bme18I | GGWCC | 1 cut(s) | 877 |
| BmeT110I | CYCGRG | 1 cut(s) | 1708 |
| BmgBI | CACGTC | 1 cut(s) | 366 |
| BmgT120I | GGNCC | 1 cut(s) | 877 |
| BmiI | GGNNCC | 3 cut(s) | 96, 181, 1722 |
| BmrI | ACTGGG | 1 cut(s) | 723 |
| BmsI | GCATC | 6 cut(s) | 18, 524, 736, 1071, 1474, 1551 |
| BmuI | ACTGGG | 1 cut(s) | 723 |
| BpmI | CTGGAG | 1 cut(s) | 470 |
| Bpu10I | CCTNAGC | 2 cut(s) | 944, 950 |
| BpuEI | CTTGAG | 1 cut(s) | 1607 |
| BsaBI | GATNNNNATC | 1 cut(s) | 165 |
| BsaI | GGTCTC | 1 cut(s) | 1641 |
| BsaJI | CCNNGG | 2 cut(s) | 18, 1202 |
| BsaWI | WCCGGW | 2 cut(s) | 176, 1771 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 544, 574, 772, 802, 1619, 1649 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 176, 480, 1445 |
| Bse118I | RCCGGY | 2 cut(s) | 176, 369 |
| Bse1I | ACTGG | 6 cut(s) | 77, 382, 592, 718, 841, 1662 |
| Bse8I | GATNNNNATC | 1 cut(s) | 165 |
| BseAI | TCCGGA | 1 cut(s) | 1771 |
| BseDI | CCNNGG | 2 cut(s) | 18, 1202 |
| BseGI | GGATG | 5 cut(s) | 39, 286, 724, 919, 1489 |
| BseJI | GATNNNNATC | 1 cut(s) | 165 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 176, 480, 1445 |
| BseMII | CTCAG | 4 cut(s) | 277, 749, 935, 941 |
| BseNI | ACTGG | 6 cut(s) | 77, 382, 592, 718, 841, 1662 |
| BseRI | GAGGAG | 6 cut(s) | 4, 406, 565, 790, 793, 1162 |
| BseXI | GCAGC | 2 cut(s) | 988, 1487 |
| BseYI | CCCAGC | 2 cut(s) | 665, 1743 |
| Bsh1236I | CGCG | 2 cut(s) | 143, 999 |
| BshFI | GGCC | 2 cut(s) | 50, 212 |
| BshTI | ACCGGT | 1 cut(s) | 176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1708 |
| BsiSI | CCGG | 3 cut(s) | 177, 370, 1772 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 176, 480, 1445 |
| BsmAI | GTCTC | 2 cut(s) | 988, 1641 |
| BsmBI | CGTCTC | 1 cut(s) | 988 |
| BsmI | GAATGC | 2 cut(s) | 475, 1203 |
| BsnI | GGCC | 2 cut(s) | 50, 212 |
| Bso31I | GGTCTC | 1 cut(s) | 1641 |
| BsoBI | CYCGRG | 1 cut(s) | 1708 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp13I | TCCGGA | 1 cut(s) | 1771 |
| Bsp143I | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| Bsp19I | CCATGG | 1 cut(s) | 18 |
| BspANI | GGCC | 2 cut(s) | 50, 212 |
| BspCNI | CTCAG | 4 cut(s) | 276, 750, 936, 942 |
| BspEI | TCCGGA | 1 cut(s) | 1771 |
| BspFNI | CGCG | 2 cut(s) | 143, 999 |
| BspLI | GGNNCC | 3 cut(s) | 96, 181, 1722 |
| BspMI | ACCTGC | 2 cut(s) | 79, 1156 |
| BspPI | GGATC | 3 cut(s) | 1092, 1278, 1748 |
| BspQI | GCTCTTC | 2 cut(s) | 428, 1052 |
| BspTNI | GGTCTC | 1 cut(s) | 1641 |
| BsrFI | RCCGGY | 2 cut(s) | 176, 369 |
| BsrI | ACTGG | 6 cut(s) | 77, 382, 592, 718, 841, 1662 |
| BssAI | RCCGGY | 2 cut(s) | 176, 369 |
| BssECI | CCNNGG | 2 cut(s) | 18, 1202 |
| BssMI | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| BssSI | CACGAG | 1 cut(s) | 1394 |
| BssT1I | CCWWGG | 2 cut(s) | 18, 1202 |
| Bst2BI | CACGAG | 1 cut(s) | 1394 |
| Bst4CI | ACNGT | 3 cut(s) | 653, 1568, 1612 |
| Bst6I | CTCTTC | 6 cut(s) | 180, 428, 671, 926, 1052, 1309 |
| BstC8I | GCNNGC | 2 cut(s) | 371, 1299 |
| BstDEI | CTNAG | 6 cut(s) | 236, 263, 758, 944, 950, 1074 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstF5I | GGATG | 5 cut(s) | 39, 286, 724, 919, 1489 |
| BstFNI | CGCG | 2 cut(s) | 143, 999 |
| BstH2I | RGCGCY | 2 cut(s) | 1463, 1522 |
| BstHHI | GCGC | 3 cut(s) | 1001, 1462, 1521 |
| BstKTI | GATC | 5 cut(s) | 39, 1087, 1273, 1632, 1756 |
| BstMAI | GTCTC | 2 cut(s) | 988, 1641 |
| BstMBI | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 94, 512, 1484 |
| BstNSI | RCATGY | 1 cut(s) | 1048 |
| BstUI | CGCG | 2 cut(s) | 143, 999 |
| BstV1I | GCAGC | 2 cut(s) | 988, 1487 |
| BstX2I | RGATCY | 2 cut(s) | 1084, 1270 |
| BstYI | RGATCY | 2 cut(s) | 1084, 1270 |
| BsuRI | GGCC | 2 cut(s) | 50, 212 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtrI | CACGTC | 1 cut(s) | 366 |
| BtsCI | GGATG | 5 cut(s) | 39, 286, 724, 919, 1489 |
| BtsI | GCAGTG | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 3 cut(s) | 24, 1458, 1669 |
| BveI | ACCTGC | 2 cut(s) | 79, 1156 |
| Cac8I | GCNNGC | 2 cut(s) | 371, 1299 |
| CfoI | GCGC | 3 cut(s) | 1001, 1462, 1521 |
| Cfr10I | RCCGGY | 2 cut(s) | 176, 369 |
| Cfr13I | GGNCC | 1 cut(s) | 877 |
| CseI | GACGC | 1 cut(s) | 1005 |
| Csp6I | GTAC | 4 cut(s) | 76, 585, 636, 711 |
| CspAI | ACCGGT | 1 cut(s) | 176 |
| CviAII | CATG | 5 cut(s) | 19, 956, 1045, 1325, 1640 |
| CviQI | GTAC | 4 cut(s) | 76, 585, 636, 711 |
| DdeI | CTNAG | 6 cut(s) | 236, 263, 758, 944, 950, 1074 |
| DpnI | GATC | 5 cut(s) | 38, 1086, 1272, 1631, 1755 |
| DpnII | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| DraI | TTTAAA | 4 cut(s) | 966, 984, 1345, 1735 |
| Eam1104I | CTCTTC | 6 cut(s) | 180, 428, 671, 926, 1052, 1309 |
| EarI | CTCTTC | 6 cut(s) | 180, 428, 671, 926, 1052, 1309 |
| Eco130I | CCWWGG | 2 cut(s) | 18, 1202 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco31I | GGTCTC | 1 cut(s) | 1641 |
| Eco47I | GGWCC | 1 cut(s) | 877 |
| Eco47III | AGCGCT | 1 cut(s) | 1520 |
| Eco57I | CTGAAG | 2 cut(s) | 1259, 1290 |
| Eco88I | CYCGRG | 1 cut(s) | 1708 |
| EcoT14I | CCWWGG | 2 cut(s) | 18, 1202 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 2 cut(s) | 18, 1202 |
| Esp3I | CGTCTC | 1 cut(s) | 988 |
| FaeI | CATG | 5 cut(s) | 22, 959, 1048, 1328, 1643 |
| FatI | CATG | 5 cut(s) | 18, 955, 1044, 1324, 1639 |
| Fnu4HI | GCNGC | 2 cut(s) | 1002, 1476 |
| FokI | GGATG | 5 cut(s) | 26, 293, 731, 926, 1496 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| Fsp4HI | GCNGC | 2 cut(s) | 1002, 1476 |
| FspBI | CTAG | 2 cut(s) | 486, 1698 |
| GlaI | GCGC | 3 cut(s) | 1000, 1461, 1520 |
| GluI | GCNGC | 2 cut(s) | 1002, 1476 |
| GsaI | CCCAGC | 2 cut(s) | 669, 1747 |
| GsuI | CTGGAG | 1 cut(s) | 470 |
| HaeII | RGCGCY | 2 cut(s) | 1463, 1522 |
| HaeIII | GGCC | 2 cut(s) | 50, 212 |
| HapII | CCGG | 3 cut(s) | 177, 370, 1772 |
| HgaI | GACGC | 1 cut(s) | 1005 |
| HhaI | GCGC | 3 cut(s) | 1001, 1462, 1521 |
| Hin1II | CATG | 5 cut(s) | 22, 959, 1048, 1328, 1643 |
| Hin6I | GCGC | 3 cut(s) | 999, 1460, 1519 |
| HinP1I | GCGC | 3 cut(s) | 999, 1460, 1519 |
| HincII | GTYRAC | 1 cut(s) | 205 |
| HindII | GTYRAC | 1 cut(s) | 205 |
| HinfI | GANTC | 5 cut(s) | 166, 219, 274, 1109, 1320 |
| HpaII | CCGG | 3 cut(s) | 177, 370, 1772 |
| Hpy166II | GTNNAC | 2 cut(s) | 205, 755 |
| Hpy188I | TCNGA | 9 cut(s) | 184, 229, 881, 1114, 1278, 1309, 1431, 1440, 1545 |
| Hpy8I | GTNNAC | 2 cut(s) | 205, 755 |
| Hpy99I | CGWCG | 1 cut(s) | 367 |
| HpyCH4III | ACNGT | 3 cut(s) | 653, 1568, 1612 |
| HpyCH4IV | ACGT | 1 cut(s) | 365 |
| HpyCH4V | TGCA | 5 cut(s) | 88, 379, 616, 1487, 1564 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 94, 512, 1484 |
| HpyF3I | CTNAG | 6 cut(s) | 236, 263, 758, 944, 950, 1074 |
| HpySE526I | ACGT | 1 cut(s) | 365 |
| Hsp92II | CATG | 5 cut(s) | 22, 959, 1048, 1328, 1643 |
| HspAI | GCGC | 3 cut(s) | 999, 1460, 1519 |
| Kpn2I | TCCGGA | 1 cut(s) | 1771 |
| KroI | GCCGGC | 1 cut(s) | 369 |
| KroNI | GCCGGC | 1 cut(s) | 371 |
| Kzo9I | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| LguI | GCTCTTC | 2 cut(s) | 428, 1052 |
| LmnI | GCTCC | 3 cut(s) | 94, 1009, 1726 |
| Lsp1109I | GCAGC | 2 cut(s) | 988, 1487 |
| LweI | GCATC | 6 cut(s) | 18, 524, 736, 1071, 1474, 1551 |
| MaeI | CTAG | 2 cut(s) | 486, 1698 |
| MaeII | ACGT | 1 cut(s) | 365 |
| MaeIII | GTNAC | 5 cut(s) | 22, 338, 560, 733, 1523 |
| MalI | GATC | 5 cut(s) | 38, 1086, 1272, 1631, 1755 |
| MboI | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| MflI | RGATCY | 2 cut(s) | 1084, 1270 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MluCI | AATT | 7 cut(s) | 409, 864, 961, 979, 1092, 1365, 1369 |
| MmeI | TCCRAC | 2 cut(s) | 775, 1248 |
| MroI | TCCGGA | 1 cut(s) | 1771 |
| MroNI | GCCGGC | 1 cut(s) | 369 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1360, 1382 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1535 |
| MspI | CCGG | 3 cut(s) | 177, 370, 1772 |
| Mva1269I | GAATGC | 2 cut(s) | 475, 1203 |
| MvnI | CGCG | 2 cut(s) | 143, 999 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 94, 512, 1484 |
| NaeI | GCCGGC | 1 cut(s) | 371 |
| NcoI | CCATGG | 1 cut(s) | 18 |
| NdeII | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| NgoMIV | GCCGGC | 1 cut(s) | 369 |
| NlaIII | CATG | 5 cut(s) | 22, 959, 1048, 1328, 1643 |
| NlaIV | GGNNCC | 3 cut(s) | 96, 181, 1722 |
| NmuCI | GTSAC | 3 cut(s) | 22, 338, 560 |
| NspI | RCATGY | 1 cut(s) | 1048 |
| PaqCI | CACCTGC | 1 cut(s) | 79 |
| PciSI | GCTCTTC | 2 cut(s) | 428, 1052 |
| PctI | GAATGC | 2 cut(s) | 475, 1203 |
| PdiI | GCCGGC | 1 cut(s) | 371 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1360, 1382 |
| PfeI | GAWTC | 5 cut(s) | 166, 219, 274, 1109, 1320 |
| PinAI | ACCGGT | 1 cut(s) | 176 |
| PkrI | GCNGC | 2 cut(s) | 1003, 1477 |
| PshBI | ATTAAT | 1 cut(s) | 1368 |
| PsiI | TTATAA | 1 cut(s) | 1467 |
| PspFI | CCCAGC | 2 cut(s) | 665, 1743 |
| PspN4I | GGNNCC | 3 cut(s) | 96, 181, 1722 |
| PspPI | GGNCC | 1 cut(s) | 877 |
| PsuI | RGATCY | 2 cut(s) | 1084, 1270 |
| RsaI | GTAC | 4 cut(s) | 77, 586, 637, 712 |
| RsaNI | GTAC | 4 cut(s) | 76, 585, 636, 711 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1535 |
| SapI | GCTCTTC | 2 cut(s) | 428, 1052 |
| SatI | GCNGC | 2 cut(s) | 1002, 1476 |
| Sau3AI | GATC | 5 cut(s) | 36, 1084, 1270, 1629, 1753 |
| Sau96I | GGNCC | 1 cut(s) | 877 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SfaNI | GCATC | 6 cut(s) | 18, 524, 736, 1071, 1474, 1551 |
| SinI | GGWCC | 1 cut(s) | 877 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1535 |
| SmlI | CTYRAG | 1 cut(s) | 1586 |
| SmoI | CTYRAG | 1 cut(s) | 1586 |
| SpeI | ACTAGT | 1 cut(s) | 485 |
| Sse9I | AATT | 7 cut(s) | 409, 864, 961, 979, 1092, 1365, 1369 |
| SspMI | CTAG | 2 cut(s) | 486, 1698 |
| StyI | CCWWGG | 2 cut(s) | 18, 1202 |
| TaaI | ACNGT | 3 cut(s) | 653, 1568, 1612 |
| TaiI | ACGT | 1 cut(s) | 368 |
| TaqI | TCGA | 3 cut(s) | 217, 320, 362 |
| TasI | AATT | 7 cut(s) | 409, 864, 961, 979, 1092, 1365, 1369 |
| TfiI | GAWTC | 5 cut(s) | 166, 219, 274, 1109, 1320 |
| TscAI | CASTG | 3 cut(s) | 31, 1458, 1669 |
| TseFI | GTSAC | 3 cut(s) | 22, 338, 560 |
| TseI | GCWGC | 2 cut(s) | 1001, 1475 |
| Tsp45I | GTSAC | 3 cut(s) | 22, 338, 560 |
| TspDTI | ATGAA | 7 cut(s) | 272, 858, 914, 930, 972, 1362, 1485 |
| TspRI | CASTG | 3 cut(s) | 31, 1458, 1669 |
| VpaK11BI | GGWCC | 1 cut(s) | 877 |
| VspI | ATTAAT | 1 cut(s) | 1368 |
| XapI | RAATTY | 2 cut(s) | 961, 979 |
| XceI | RCATGY | 1 cut(s) | 1048 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1331 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1360, 1382 |
| XspI | CTAG | 2 cut(s) | 486, 1698 |