Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0008196

Physical Location & Seq

Genomic Coordinates Forward (+)

20912406 .. 20915248

Gene Structure 2843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1133600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGAAGCAACTGCACAAGCAATCAAGCTTGAACCACCGACGGGACGAAGAGATCCCATCGTCCCTCAGCTCCCCCTACTCCACCAAAGCTCCCAAGCACCCCCGATCCCTCCCCAGATCCATCAACTACCTCTTCAAGGAGCAGCGCCTCCTCTTCATCCTCGTCGGCATTCTCATCGGCTCCACCTTCTTCATCCTCCAGCCCACCCTCTCCCGCCTCGGCCCCTCCGATCCCAACTCCGCCGCCACCTCCGTCTCCAGAACCTTCTCCACCGCCCACGACCTCGTCTCCAAGGCCACCCATGCCAAGGTCGGTCGCGTCCCTGTTGCGCTCGGTCAGCGGAGGCTGCGAATCGTCGTCACCGGCGGAGCTGGGTTCGTCGGGTCCCACCTCGTTGACAAGCTCATTGACAGAGGTAATGATGTCATTGTGATTGATAATTTCTTCACTGGGAGGAAGGACAATCTGGTGCACCATTTCGGGAACCCGAGGTTCGAGCTCATTAGGCACGACGTCGTCGAGCCGATTCTGCTGGAGGTGGATCAGATCTACCATTTGGCTTGTCCTGCCTCCCCTGTTCATTACAAGTATAACCCAGTCAAGACAATCATATCCTTTTCAATCAATTATACCTTTTTCCTAGTTTTCGCGACCAATGTGATGGGTACTCTTAATATGTTGGGACTTGCCAAGCGAATCGGGGCGCGGTTTCTGCTCACTAGTACGAGTGAAGTTTATGGGGACCCTCTGGAGCATCCTCAGAAGGAAACTTACTGGGGAAACGTAAATCCTATAGGTGAGAGGAGTTGCTATGATGAAGGAAAGAGGACAGCAGAGACATTGGCAATGGATTATCACCGAGGTGCCGATGTTGAGGTGCGTATTGCTCGAATTTTCAACACGTACGGGCCACGTATGTGTTTAGATGATGGGCGTGTGGTTAGCAATTTTGTTGCACAGGCTATCCGCAAGCAACCATTGACTGTGTACGGTGATGGTAAACAAACACGAAGCTTTCAATATGTCTCTGATTTGGTCAATGGACTGATGGCACTGATGGATGGAGAACATGTGGGACCTTTCAACCTTGGTAATCCAGGGGAGTTCACCATGCTTGAGCTTGCTGAGGTTGTCAAAGAAACGATTGATTCAAGTGCGACAATAGAATTCAGACCAAATACTGCTGACGATCCACACAAGAGAAAGCCCGATATTAGCAAAGCCAAGGAGCTATTGAACTGGGAGCCCAAAGTCTCGCTGAGGGAAGGACTGCCTCTAATGGTGAGTGATTTCCAGAATCGCATTTTAAATGAAGATGAAGGAAAGGGGATTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005975 GO:0005996 GO:0008150 GO:0008152 GO:0016829 GO:0016830 GO:0016831 GO:0019321 GO:0036094 GO:0042732 GO:0043167 GO:0043168 GO:0044238 GO:0044281 GO:0048037 GO:0048040 GO:0050662 GO:0051287 GO:0070403 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

446

Amino Acids

49.83

Weight (kDa)

8.76

Isoelectric Point (pI)

35.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	118 - 364	2e-40	NAD dependent epimerase/dehydratase family
3Beta_HSD	PF01073	119 - 345	3.1e-09	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	120 - 425	9.6e-50	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53520 AT3G53520 AT3G53520 AT3G53520
fragaria_vesca	FvH4_6g14640
malus_domestica	MD04G1118200.v1.1 MD12G1133600.v1.1
prunus_persica	Prupe.6G247300_v2.0.a1 Prupe.6G247300_v2.0.a1
pyrus_communis	pycom04g10780 pycom12g12900
rosa_chinensis	RchiOBHm_Chr3g0467761
rosa_laevigata	RLG00000024475
rosa_multiflora	Rmu_sc0001793.1_g000026
rosa_roxburghii	Rroxscaffold_6G00413440
rosa_rugosa	Rorug03G0089700 Rorug03G0089800 Rorug06G0076700
rosa_samantha	Rh3AG138100 Rh3BG159400 Rh3CG159400 Rh3DG159900
rosa_wichuraiana	Rw3G013080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	516
AccB1I	GGYRCC	1 cut(s)	863
AccII	CGCG	3 cut(s)	318, 650, 706
AciI	CCGC	8 cut(s)	214, 240, 243, 273, 340, 366, 706, 967
AclWI	GGATC	6 cut(s)	46, 99, 111, 224, 549, 1184
AcsI	RAATTY	2 cut(s)	891, 1166
AcyI	GRCGYC	1 cut(s)	513
AfaI	GTAC	4 cut(s)	667, 724, 905, 989
AfiI	CCNNNNNNNGG	3 cut(s)	40, 136, 307
AflIII	ACRYGT	2 cut(s)	900, 1069
AgsI	TTSAA	8 cut(s)	31, 136, 621, 898, 1019, 1084, 1152, 1237
AhlI	ACTAGT	1 cut(s)	719
AjnI	CCWGG	1 cut(s)	1096
AleI	CACNNNNGTG	2 cut(s)	861, 916
AluBI	AGCT	9 cut(s)	27, 69, 89, 371, 403, 499, 1014, 1120, 1231
AluI	AGCT	9 cut(s)	27, 69, 89, 371, 403, 499, 1014, 1120, 1231
Alw21I	GWGCWC	2 cut(s)	474, 501
Alw26I	GTCTC	5 cut(s)	259, 292, 830, 1030, 1258
Alw44I	GTGCAC	1 cut(s)	470
AlwI	GGATC	6 cut(s)	46, 99, 111, 224, 549, 1184
Ama87I	CYCGRG	1 cut(s)	487
AoxI	GGCC	3 cut(s)	220, 294, 908
ApaLI	GTGCAC	1 cut(s)	470
ApeKI	GCWGC	2 cut(s)	142, 346
ApoI	RAATTY	2 cut(s)	891, 1166
AspLEI	GCGC	3 cut(s)	147, 331, 706
AspS9I	GGNCC	5 cut(s)	221, 384, 742, 908, 1076
AsuHPI	GGTGA	6 cut(s)	352, 809, 848, 1004, 1099, 1294
AvaI	CYCGRG	1 cut(s)	487
AvaII	GGWCC	3 cut(s)	384, 742, 1076
BaeGI	GKGCMC	1 cut(s)	474
BanI	GGYRCC	1 cut(s)	863
BanII	GRGCYC	2 cut(s)	501, 1248
BarI	GAAGNNNNNNTAC	2 cut(s)	755, 787
Bbv12I	GWGCWC	2 cut(s)	474, 501
BbvCI	CCTCAGC	3 cut(s)	65, 1125, 1259
BbvI	GCAGC	2 cut(s)	154, 333
BccI	CCATC	8 cut(s)	64, 128, 655, 923, 989, 1042, 1051, 1055
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	1 cut(s)	1098
BcoDI	GTCTC	5 cut(s)	259, 292, 830, 1030, 1258
BcuI	ACTAGT	1 cut(s)	719
BfaI	CTAG	2 cut(s)	641, 720
BfmI	CTRYAG	1 cut(s)	792
BfoI	RGCGCY	1 cut(s)	148
BglII	AGATCT	1 cut(s)	546
BisI	GCNGC	3 cut(s)	143, 243, 347
BlsI	GCNGC	3 cut(s)	144, 244, 348
Bme1390I	CCNGG	1 cut(s)	1098
Bme18I	GGWCC	3 cut(s)	384, 742, 1076
BmeT110I	CYCGRG	1 cut(s)	487
BmgT120I	GGNCC	5 cut(s)	221, 384, 742, 908, 1076
BmrFI	CCNGG	1 cut(s)	1098
BmrI	ACTGGG	4 cut(s)	459, 590, 784, 1249
BmsI	GCATC	1 cut(s)	763
BmuI	ACTGGG	4 cut(s)	459, 590, 784, 1249
BpmI	CTGGAG	4 cut(s)	182, 241, 554, 770
Bpu10I	CCTNAGC	3 cut(s)	65, 1125, 1259
BpuEI	CTTGAG	1 cut(s)	1136
BsaAI	YACGTR	2 cut(s)	903, 914
BsaHI	GRCGYC	1 cut(s)	513
BsaJI	CCNNGG	8 cut(s)	217, 291, 306, 488, 859, 1087, 1097, 1224
BsaXI	ACNNNNNCTCC	6 cut(s)	73, 103, 272, 302, 1056, 1086
Bsc4I	CCNNNNNNNGG	3 cut(s)	40, 136, 307
Bse118I	RCCGGY	1 cut(s)	362
Bse1I	ACTGG	4 cut(s)	454, 596, 779, 1244
Bse3DI	GCAATG	1 cut(s)	852
BseBI	CCWGG	1 cut(s)	1098
BseDI	CCNNGG	8 cut(s)	217, 291, 306, 488, 859, 1087, 1097, 1224
BseGI	GGATG	4 cut(s)	156, 192, 754, 1066
BseLI	CCNNNNNNNGG	3 cut(s)	40, 136, 307
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	4 cut(s)	79, 773, 1116, 1250
BseNI	ACTGG	4 cut(s)	454, 596, 779, 1244
BseRI	GAGGAG	2 cut(s)	140, 817
BseSI	GKGCMC	1 cut(s)	474
BseXI	GCAGC	2 cut(s)	154, 333
BseYI	CCCAGC	1 cut(s)	371
Bsh1236I	CGCG	3 cut(s)	318, 650, 706
Bsh1285I	CGRYCG	1 cut(s)	316
BshFI	GGCC	3 cut(s)	222, 296, 910
BshNI	GGYRCC	1 cut(s)	863
BsiEI	CGRYCG	1 cut(s)	316
BsiHKAI	GWGCWC	2 cut(s)	474, 501
BsiHKCI	CYCGRG	1 cut(s)	487
BsiSI	CCGG	1 cut(s)	363
BsiWI	CGTACG	1 cut(s)	903
BslFI	GGGAC	7 cut(s)	46, 56, 305, 370, 696, 755, 1089
BslI	CCNNNNNNNGG	3 cut(s)	40, 136, 307
BsmAI	GTCTC	5 cut(s)	259, 292, 830, 1030, 1258
BsmBI	CGTCTC	2 cut(s)	259, 292
BsmFI	GGGAC	7 cut(s)	46, 56, 305, 370, 696, 755, 1089
BsmI	GAATGC	1 cut(s)	168
BsnI	GGCC	3 cut(s)	222, 296, 910
BsoBI	CYCGRG	1 cut(s)	487
Bsp1286I	GDGCHC	3 cut(s)	474, 501, 1248
Bsp143I	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
Bsp68I	TCGCGA	1 cut(s)	650
BspACI	CCGC	8 cut(s)	214, 240, 243, 273, 340, 366, 706, 967
BspANI	GGCC	3 cut(s)	222, 296, 910
BspCNI	CTCAG	4 cut(s)	78, 772, 1117, 1251
BspFNI	CGCG	3 cut(s)	318, 650, 706
BspPI	GGATC	6 cut(s)	46, 99, 111, 224, 549, 1184
BspT107I	GGYRCC	1 cut(s)	863
BsrDI	GCAATG	1 cut(s)	852
BsrFI	RCCGGY	1 cut(s)	362
BsrI	ACTGG	4 cut(s)	454, 596, 779, 1244
BssAI	RCCGGY	1 cut(s)	362
BssECI	CCNNGG	8 cut(s)	217, 291, 306, 488, 859, 1087, 1097, 1224
BssMI	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
BssNI	GRCGYC	1 cut(s)	513
BssT1I	CCWWGG	4 cut(s)	291, 306, 1087, 1224
Bst2UI	CCWGG	1 cut(s)	1098
Bst4CI	ACNGT	2 cut(s)	985, 992
Bst6I	CTCTTC	3 cut(s)	42, 137, 158
BstACI	GRCGYC	1 cut(s)	513
BstBAI	YACGTR	2 cut(s)	903, 914
BstC8I	GCNNGC	2 cut(s)	971, 1122
BstDEI	CTNAG	4 cut(s)	65, 759, 1125, 1259
BstENI	CCTNNNNNAGG	1 cut(s)	134
BstF5I	GGATG	4 cut(s)	156, 192, 754, 1066
BstFNI	CGCG	3 cut(s)	318, 650, 706
BstH2I	RGCGCY	1 cut(s)	148
BstHHI	GCGC	3 cut(s)	147, 331, 706
BstKTI	GATC	7 cut(s)	54, 107, 119, 232, 544, 549, 1192
BstMAI	GTCTC	5 cut(s)	259, 292, 830, 1030, 1258
BstMBI	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
BstMCI	CGRYCG	1 cut(s)	316
BstMWI	GCNNNNNNNGC	7 cut(s)	302, 337, 346, 505, 529, 566, 712
BstNI	CCWGG	1 cut(s)	1098
BstNSI	RCATGY	1 cut(s)	1073
BstSCI	CCNGG	1 cut(s)	1096
BstSFI	CTRYAG	1 cut(s)	792
BstSLI	GKGCMC	1 cut(s)	474
BstUI	CGCG	3 cut(s)	318, 650, 706
BstV1I	GCAGC	2 cut(s)	154, 333
BstX2I	RGATCY	3 cut(s)	51, 116, 546
BstXI	CCANNNNNNTGG	1 cut(s)	661
BstYI	RGATCY	3 cut(s)	51, 116, 546
BsuRI	GGCC	3 cut(s)	222, 296, 910
BtsCI	GGATG	4 cut(s)	156, 192, 754, 1066
BtsIMutI	CAGTG	2 cut(s)	447, 1052
BtuMI	TCGCGA	1 cut(s)	650
Cac8I	GCNNGC	2 cut(s)	971, 1122
CfoI	GCGC	3 cut(s)	147, 331, 706
Cfr10I	RCCGGY	1 cut(s)	362
Cfr13I	GGNCC	5 cut(s)	221, 384, 742, 908, 1076
CseI	GACGC	1 cut(s)	307
Csp6I	GTAC	4 cut(s)	666, 723, 904, 988
CviAII	CATG	3 cut(s)	302, 1070, 1111
CviQI	GTAC	4 cut(s)	666, 723, 904, 988
DdeI	CTNAG	4 cut(s)	65, 759, 1125, 1259
DpnI	GATC	7 cut(s)	53, 106, 118, 231, 543, 548, 1191
DpnII	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
DraI	TTTAAA	1 cut(s)	1308
Eam1104I	CTCTTC	3 cut(s)	42, 137, 158
EarI	CTCTTC	3 cut(s)	42, 137, 158
EciI	GGCGGA	2 cut(s)	229, 381
Ecl136II	GAGCTC	1 cut(s)	499
Eco130I	CCWWGG	4 cut(s)	291, 306, 1087, 1224
Eco24I	GRGCYC	2 cut(s)	501, 1248
Eco47I	GGWCC	3 cut(s)	384, 742, 1076
Eco53kI	GAGCTC	1 cut(s)	499
Eco88I	CYCGRG	1 cut(s)	487
EcoICRI	GAGCTC	1 cut(s)	499
EcoNI	CCTNNNNNAGG	1 cut(s)	134
EcoO109I	RGGNCCY	3 cut(s)	384, 742, 1076
EcoRI	GAATTC	1 cut(s)	1166
EcoRII	CCWGG	1 cut(s)	1096
EcoT14I	CCWWGG	4 cut(s)	291, 306, 1087, 1224
EcoT38I	GRGCYC	2 cut(s)	501, 1248
ErhI	CCWWGG	4 cut(s)	291, 306, 1087, 1224
Esp3I	CGTCTC	2 cut(s)	259, 292
FaeI	CATG	3 cut(s)	305, 1073, 1114
FaqI	GGGAC	7 cut(s)	46, 56, 305, 370, 696, 755, 1089
FatI	CATG	3 cut(s)	301, 1069, 1110
FauI	CCCGC	1 cut(s)	221
Fnu4HI	GCNGC	3 cut(s)	143, 243, 347
FokI	GGATG	4 cut(s)	143, 179, 741, 1073
FriOI	GRGCYC	2 cut(s)	501, 1248
Fsp4HI	GCNGC	3 cut(s)	143, 243, 347
FspBI	CTAG	2 cut(s)	641, 720
GlaI	GCGC	3 cut(s)	146, 330, 705
GluI	GCNGC	3 cut(s)	143, 243, 347
GsaI	CCCAGC	1 cut(s)	375
GsuI	CTGGAG	4 cut(s)	182, 241, 554, 770
HaeII	RGCGCY	1 cut(s)	148
HaeIII	GGCC	3 cut(s)	222, 296, 910
HapII	CCGG	1 cut(s)	363
HgaI	GACGC	1 cut(s)	307
HhaI	GCGC	3 cut(s)	147, 331, 706
Hin1I	GRCGYC	1 cut(s)	513
Hin1II	CATG	3 cut(s)	305, 1073, 1114
Hin6I	GCGC	3 cut(s)	145, 329, 704
HinP1I	GCGC	3 cut(s)	145, 329, 704
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HindIII	AAGCTT	2 cut(s)	25, 1012
HinfI	GANTC	5 cut(s)	351, 526, 696, 1148, 1297
HpaII	CCGG	1 cut(s)	363
HphI	GGTGA	6 cut(s)	352, 809, 848, 1004, 1099, 1294
Hpy166II	GTNNAC	5 cut(s)	397, 472, 988, 1001, 1107
Hpy188I	TCNGA	5 cut(s)	229, 546, 762, 1030, 1172
Hpy188III	TCNNGA	6 cut(s)	258, 481, 601, 649, 749, 1294
Hpy8I	GTNNAC	5 cut(s)	397, 472, 988, 1001, 1107
Hpy99I	CGWCG	7 cut(s)	42, 167, 359, 383, 515, 518, 521
HpyAV	CCTTC	7 cut(s)	196, 274, 451, 757, 812, 1259, 1313
HpyCH4III	ACNGT	2 cut(s)	985, 992
HpyCH4IV	ACGT	4 cut(s)	513, 783, 902, 913
HpyCH4V	TGCA	3 cut(s)	13, 472, 956
HpyF10VI	GCNNNNNNNGC	7 cut(s)	302, 337, 346, 505, 529, 566, 712
HpyF3I	CTNAG	4 cut(s)	65, 759, 1125, 1259
HpySE526I	ACGT	4 cut(s)	513, 783, 902, 913
Hsp92I	GRCGYC	1 cut(s)	513
Hsp92II	CATG	3 cut(s)	305, 1073, 1114
HspAI	GCGC	3 cut(s)	145, 329, 704
KflI	GGGWCCC	2 cut(s)	384, 742
Kzo9I	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
LmnI	GCTCC	8 cut(s)	74, 94, 139, 185, 368, 751, 1228, 1243
Lsp1109I	GCAGC	2 cut(s)	154, 333
LweI	GCATC	1 cut(s)	763
MaeI	CTAG	2 cut(s)	641, 720
MaeII	ACGT	4 cut(s)	513, 783, 902, 913
MaeIII	GTNAC	1 cut(s)	358
MalI	GATC	7 cut(s)	53, 106, 118, 231, 543, 548, 1191
MboI	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
MboII	GAAGA	6 cut(s)	59, 124, 145, 181, 436, 1325
MflI	RGATCY	3 cut(s)	51, 116, 546
MhlI	GDGCHC	3 cut(s)	474, 501, 1248
MluCI	AATT	5 cut(s)	439, 625, 891, 946, 1166
MseI	TTAA	3 cut(s)	672, 1307, 1332
MslI	CAYNNNNRTG	2 cut(s)	861, 916
MspA1I	CMGCKG	1 cut(s)	340
MspI	CCGG	1 cut(s)	363
MspR9I	CCNGG	1 cut(s)	1098
Mva1269I	GAATGC	1 cut(s)	168
MvaI	CCWGG	1 cut(s)	1098
MvnI	CGCG	3 cut(s)	318, 650, 706
MwoI	GCNNNNNNNGC	7 cut(s)	302, 337, 346, 505, 529, 566, 712
NdeII	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
NlaIII	CATG	3 cut(s)	305, 1073, 1114
NmeAIII	GCCGAG	1 cut(s)	198
NmuCI	GTSAC	1 cut(s)	358
NruI	TCGCGA	1 cut(s)	650
NspI	RCATGY	1 cut(s)	1073
OliI	CACNNNNGTG	2 cut(s)	861, 916
PciI	ACATGT	1 cut(s)	1069
PcsI	WCGNNNNNNNCGW	2 cut(s)	225, 516
PctI	GAATGC	1 cut(s)	168
PfeI	GAWTC	5 cut(s)	351, 526, 696, 1148, 1297
Pfl23II	CGTACG	1 cut(s)	903
PflFI	GACNNNGTC	2 cut(s)	284, 515
PkrI	GCNGC	3 cut(s)	144, 244, 348
Ppu21I	YACGTR	2 cut(s)	903, 914
PpuMI	RGGWCCY	3 cut(s)	384, 742, 1076
PscI	ACATGT	1 cut(s)	1069
Psp124BI	GAGCTC	1 cut(s)	501
Psp5II	RGGWCCY	3 cut(s)	384, 742, 1076
Psp6I	CCWGG	1 cut(s)	1096
PspFI	CCCAGC	1 cut(s)	371
PspGI	CCWGG	1 cut(s)	1096
PspLI	CGTACG	1 cut(s)	903
PspPI	GGNCC	5 cut(s)	221, 384, 742, 908, 1076
PspPPI	RGGWCCY	3 cut(s)	384, 742, 1076
PsuI	RGATCY	3 cut(s)	51, 116, 546
PsyI	GACNNNGTC	2 cut(s)	284, 515
RruI	TCGCGA	1 cut(s)	650
RsaI	GTAC	4 cut(s)	667, 724, 905, 989
RsaNI	GTAC	4 cut(s)	666, 723, 904, 988
RseI	CAYNNNNRTG	2 cut(s)	861, 916
SacI	GAGCTC	1 cut(s)	501
SaqAI	TTAA	3 cut(s)	672, 1307, 1332
SatI	GCNGC	3 cut(s)	143, 243, 347
Sau3AI	GATC	7 cut(s)	51, 104, 116, 229, 541, 546, 1189
Sau96I	GGNCC	5 cut(s)	221, 384, 742, 908, 1076
ScrFI	CCNGG	1 cut(s)	1098
SduI	GDGCHC	3 cut(s)	474, 501, 1248
SfaNI	GCATC	1 cut(s)	763
SfcI	CTRYAG	1 cut(s)	792
SgrAI	CRCCGGYG	1 cut(s)	362
SinI	GGWCC	3 cut(s)	384, 742, 1076
SmiMI	CAYNNNNRTG	2 cut(s)	861, 916
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
SpeI	ACTAGT	1 cut(s)	719
Sse9I	AATT	5 cut(s)	439, 625, 891, 946, 1166
SsiI	CCGC	8 cut(s)	214, 240, 243, 273, 340, 366, 706, 967
SspMI	CTAG	2 cut(s)	641, 720
SstI	GAGCTC	1 cut(s)	501
StyD4I	CCNGG	1 cut(s)	1096
StyI	CCWWGG	4 cut(s)	291, 306, 1087, 1224
TaaI	ACNGT	2 cut(s)	985, 992
TaiI	ACGT	4 cut(s)	516, 786, 905, 916
TaqI	TCGA	3 cut(s)	495, 519, 889
TaqII	GACCGA	2 cut(s)	302, 323
TasI	AATT	5 cut(s)	439, 625, 891, 946, 1166
TauI	GCSGC	1 cut(s)	245
TfiI	GAWTC	5 cut(s)	351, 526, 696, 1148, 1297
Tru1I	TTAA	3 cut(s)	672, 1307, 1332
Tru9I	TTAA	3 cut(s)	672, 1307, 1332
TscAI	CASTG	2 cut(s)	454, 1059
TseFI	GTSAC	1 cut(s)	358
TseI	GCWGC	2 cut(s)	142, 346
Tsp45I	GTSAC	1 cut(s)	358
TspDTI	ATGAA	7 cut(s)	17, 145, 181, 569, 831, 1326, 1332
TspGWI	ACGGA	1 cut(s)	241
TspRI	CASTG	2 cut(s)	454, 1059
Tth111I	GACNNNGTC	2 cut(s)	284, 515
VneI	GTGCAC	1 cut(s)	470
VpaK11BI	GGWCC	3 cut(s)	384, 742, 1076
XagI	CCTNNNNNAGG	1 cut(s)	134
XapI	RAATTY	2 cut(s)	891, 1166
XceI	RCATGY	1 cut(s)	1073
XspI	CTAG	2 cut(s)	641, 720
ZraI	GACGTC	1 cut(s)	514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.