Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008196

Physical Location & Seq

Genomic Coordinates Reverse (-)

13866820 .. 13870625

Gene Structure 3806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43370

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGAAACAGCTACACAAGCAACCGAGCGTGAATCACAGGAGGGACGAAGAGATCCCAACCTCCCTATCCTCCTCCTACTCCCCCAAAGCCTTCAAGCACCCCAGATCTCTCCCCAGATCCATCAACTACATCTTCAGAGAGCAACGCCTCCTCTTCATCCTCGTCGGCATTCTCATCGGCTCCACCTTCTTCATCCTCCAGCCCACTCTCTCCCGCCTCTCCCCTTCCGAGCCCAATCCCTCCATCCCCCGATCCTTCTCCTCCTCCTCCCTCCACGACCGTATCAACACCGCCTCCTTCTCCACCGACCTCCGCAGCAACGCCGGCAGGGTCCCCGCCGGCCTCGGCAAGCGCAGGCTCAGGATCGTCGTCACCGGTGGCGCCGGCTTCGTCGGCTCCCACCTCGTCGATCAGTTGCTCTCCAGAGGGAACGACGTCATCGTCATTGACAATTTCTTCACCGGGAGGAAGGAGAATGTGGCGCACCATTTCGGGAATCCCAGGTTCGAGCTCATTCGCCACGACGTCGTTGAGCCGATTCTGCTGGAGGTCGATCAGATCTACCATCTGGCCTGCCCGGCCTCGCCTGTTCACTATAAGTACAATCCGGGATGCATTTTCGAAATGGTTTTTGAGGCCCTTGACTGTGATTACAAGACCAATGTGATGGGGACCCTTAATATGCTAGGCCTTGCGAAGCGAATTGGGGCTAGGTTTTTAATCACTAGTACCAGTGAGGTCTATGGTGATCCACTGGAGCATCCTCAGAAGGAGACTTACTGGGGAAATGTCAATCCTATAGGTGAGAGGAGCTGTTATGACGAAGGAAAGAGGACGGCAGAGACTCTGGCAATGGATTATCATCGAGGTGCAGGTGTTGAGGTTCGTATTGCTCGAATTTTCAATACATATGGGCCACGTATGTGTTTGGATGATGGGCGTGTTGTCAGCAATTTTGTTGCTCAGGCTATCCGCAAACAACCATTGACTGTGTACGGTGATGGTAAACAAACACGAAGCTTCCAATATGTCTCTGATTTGGTAAATGGACTGGTGGCGTTGATGGAAGGCGAACATGTGGGGCCTTTCAACCTGGGAAATCCCGGGGAATTCACCATGCTAGAGCTTGCTGAGGTTGTGAAAGAAACAATTGATTCCAGTGCAACAATAGAATTCAGGCCAAATACTGCTGATGATCCTCATAAGAGGAAACCTGATATTGGCAAAGCAAAAGAGCTGTTGAACTGGGAGCCAAAAGTATCACTGAGGGAGGGACTGCCTCTAATGGTGAGTGATTTCCAGAATCGCATTTTAAATGAGGATGAAGGAAAAGGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005975 GO:0005996 GO:0008150 GO:0008152 GO:0016829 GO:0016830 GO:0016831 GO:0019321 GO:0036094 GO:0042732 GO:0043167 GO:0043168 GO:0044238 GO:0044281 GO:0048037 GO:0048040 GO:0050662 GO:0051287 GO:0070403 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GDP_Man_Dehyd

Protein Analysis

446

Amino Acids

49.98

Weight (kDa)

7.72

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	122 - 366	2.1e-42	NAD dependent epimerase/dehydratase family
3Beta_HSD	PF01073	123 - 347	1.5e-10	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	124 - 427	3.6e-51	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53520 AT3G53520 AT3G53520 AT3G53520
fragaria_vesca	FvH4_6g14640
malus_domestica	MD04G1118200.v1.1 MD12G1133600.v1.1
prunus_persica	Prupe.6G247300_v2.0.a1 Prupe.6G247300_v2.0.a1
pyrus_communis	pycom04g10780 pycom12g12900
rosa_chinensis	RchiOBHm_Chr3g0467761
rosa_laevigata	RLG00000024475
rosa_multiflora	Rmu_sc0001793.1_g000026
rosa_roxburghii	Rroxscaffold_6G00413440
rosa_rugosa	Rorug03G0089700 Rorug03G0089800 Rorug06G0076700
rosa_samantha	Rh3AG138100 Rh3BG159400 Rh3CG159400 Rh3DG159900
rosa_wichuraiana	Rw3G013080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	863
AasI	GACNNNNNNGTC	1 cut(s)	440
AatII	GACGTC	2 cut(s)	438, 528
Acc36I	ACCTGC	1 cut(s)	863
AccB1I	GGYRCC	1 cut(s)	380
AciI	CCGC	5 cut(s)	214, 291, 313, 336, 973
AclWI	GGATC	6 cut(s)	46, 111, 246, 371, 743, 1190
AcsI	RAATTY	3 cut(s)	897, 1109, 1172
AcuI	CTGAAG	1 cut(s)	118
AcyI	GRCGYC	3 cut(s)	381, 435, 525
AfaI	GTAC	3 cut(s)	602, 730, 995
AfiI	CCNNNNNNNGG	1 cut(s)	1220
AflIII	ACRYGT	1 cut(s)	1075
AgeI	ACCGGT	1 cut(s)	374
AgsI	TTSAA	4 cut(s)	94, 904, 1090, 1243
AhlI	ACTAGT	1 cut(s)	725
AjnI	CCWGG	2 cut(s)	500, 1092
AleI	CACNNNNGTG	1 cut(s)	922
AluBI	AGCT	6 cut(s)	10, 511, 813, 1020, 1126, 1237
AluI	AGCT	6 cut(s)	10, 511, 813, 1020, 1126, 1237
Alw21I	GWGCWC	1 cut(s)	513
Alw26I	GTCTC	3 cut(s)	767, 836, 1036
AlwI	GGATC	6 cut(s)	46, 111, 246, 371, 743, 1190
Ama87I	CYCGRG	1 cut(s)	1103
AoxI	GGCC	8 cut(s)	340, 570, 579, 636, 688, 914, 1082, 1178
ApeKI	GCWGC	1 cut(s)	315
ApoI	RAATTY	3 cut(s)	897, 1109, 1172
AsiGI	ACCGGT	1 cut(s)	374
AspLEI	GCGC	3 cut(s)	354, 383, 484
AspS9I	GGNCC	5 cut(s)	331, 637, 672, 914, 1082
AsuC2I	CCSGG	5 cut(s)	463, 578, 609, 1104, 1105
AsuHPI	GGTGA	7 cut(s)	364, 451, 758, 815, 1010, 1105, 1300
AsuII	TTCGAA	1 cut(s)	621
AvaI	CYCGRG	1 cut(s)	1103
AvaII	GGWCC	2 cut(s)	331, 672
BaeI	ACNNNNGTAYC	2 cut(s)	265, 298
BanI	GGYRCC	1 cut(s)	380
BanII	GRGCYC	2 cut(s)	234, 513
BarI	GAAGNNNNNNTAC	2 cut(s)	761, 793
Bbv12I	GWGCWC	1 cut(s)	513
BbvCI	CCTCAGC	1 cut(s)	1131
BbvI	GCAGC	1 cut(s)	327
BccI	CCATC	7 cut(s)	128, 251, 573, 661, 929, 995, 1057
BceAI	ACGGC	1 cut(s)	852
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	2 cut(s)	502, 1094
BcnI	CCSGG	5 cut(s)	463, 578, 609, 1104, 1105
BcoDI	GTCTC	3 cut(s)	767, 836, 1036
BcuI	ACTAGT	1 cut(s)	725
BfaI	CTAG	4 cut(s)	686, 711, 726, 1121
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	384
BfuAI	ACCTGC	1 cut(s)	863
BglI	GCCNNNNNGGC	1 cut(s)	578
BglII	AGATCT	2 cut(s)	104, 558
BisI	GCNGC	1 cut(s)	316
BlsI	GCNGC	1 cut(s)	317
Bme1390I	CCNGG	7 cut(s)	463, 502, 578, 609, 1094, 1104, 1105
Bme18I	GGWCC	2 cut(s)	331, 672
BmeT110I	CYCGRG	1 cut(s)	1103
BmgT120I	GGNCC	5 cut(s)	331, 637, 672, 914, 1082
BmiI	GGNNCC	9 cut(s)	181, 332, 333, 382, 397, 673, 674, 1083, 1251
BmrFI	CCNGG	7 cut(s)	463, 502, 578, 609, 1094, 1104, 1105
BmrI	ACTGGG	2 cut(s)	790, 1255
BmsI	GCATC	2 cut(s)	602, 769
BmuI	ACTGGG	2 cut(s)	790, 1255
BpmI	CTGGAG	4 cut(s)	182, 406, 566, 776
Bpu10I	CCTNAGC	3 cut(s)	359, 963, 1131
Bpu14I	TTCGAA	1 cut(s)	621
BpuMI	CCSGG	5 cut(s)	463, 578, 609, 1104, 1105
BsaAI	YACGTR	1 cut(s)	920
BsaBI	GATNNNNATC	1 cut(s)	861
BsaHI	GRCGYC	3 cut(s)	381, 435, 525
BsaJI	CCNNGG	5 cut(s)	343, 500, 1093, 1103, 1104
BsaWI	WCCGGW	1 cut(s)	374
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	1 cut(s)	1220
Bse118I	RCCGGY	4 cut(s)	323, 338, 374, 383
Bse1I	ACTGG	6 cut(s)	732, 759, 785, 1056, 1158, 1250
Bse3DI	GCAATG	1 cut(s)	858
Bse8I	GATNNNNATC	1 cut(s)	861
BseBI	CCWGG	2 cut(s)	502, 1094
BseDI	CCNNGG	5 cut(s)	343, 500, 1093, 1103, 1104
BseGI	GGATG	7 cut(s)	156, 192, 243, 617, 760, 937, 1327
BseJI	GATNNNNATC	1 cut(s)	861
BseLI	CCNNNNNNNGG	1 cut(s)	1220
BseMI	GCAATG	1 cut(s)	858
BseMII	CTCAG	5 cut(s)	373, 779, 977, 1122, 1256
BseNI	ACTGG	6 cut(s)	732, 759, 785, 1056, 1158, 1250
BseRI	GAGGAG	6 cut(s)	61, 140, 250, 253, 256, 823
BseXI	GCAGC	1 cut(s)	327
BsgI	GTGCAG	1 cut(s)	891
Bsh1285I	CGRYCG	1 cut(s)	280
BshFI	GGCC	8 cut(s)	342, 572, 581, 638, 690, 916, 1084, 1180
BshNI	GGYRCC	1 cut(s)	380
BshTI	ACCGGT	1 cut(s)	374
BsiEI	CGRYCG	1 cut(s)	280
BsiHKAI	GWGCWC	1 cut(s)	513
BsiHKCI	CYCGRG	1 cut(s)	1103
BsiSI	CCGG	8 cut(s)	324, 339, 375, 384, 462, 578, 608, 1104
BslFI	GGGAC	4 cut(s)	56, 317, 685, 1287
BslI	CCNNNNNNNGG	1 cut(s)	1220
BsmAI	GTCTC	3 cut(s)	767, 836, 1036
BsmFI	GGGAC	4 cut(s)	56, 317, 685, 1287
BsmI	GAATGC	1 cut(s)	168
BsnI	GGCC	8 cut(s)	342, 572, 581, 638, 690, 916, 1084, 1180
BsoBI	CYCGRG	1 cut(s)	1103
Bsp119I	TTCGAA	1 cut(s)	621
Bsp1286I	GDGCHC	2 cut(s)	234, 513
BspACI	CCGC	5 cut(s)	214, 291, 313, 336, 973
BspANI	GGCC	8 cut(s)	342, 572, 581, 638, 690, 916, 1084, 1180
BspCNI	CTCAG	5 cut(s)	372, 778, 976, 1123, 1257
BspLI	GGNNCC	9 cut(s)	181, 332, 333, 382, 397, 673, 674, 1083, 1251
BspMI	ACCTGC	1 cut(s)	863
BspPI	GGATC	6 cut(s)	46, 111, 246, 371, 743, 1190
BspT104I	TTCGAA	1 cut(s)	621
BspT107I	GGYRCC	1 cut(s)	380
BsrDI	GCAATG	1 cut(s)	858
BsrFI	RCCGGY	4 cut(s)	323, 338, 374, 383
BsrI	ACTGG	6 cut(s)	732, 759, 785, 1056, 1158, 1250
BssAI	RCCGGY	4 cut(s)	323, 338, 374, 383
BssECI	CCNNGG	5 cut(s)	343, 500, 1093, 1103, 1104
BssNI	GRCGYC	3 cut(s)	381, 435, 525
Bst2UI	CCWGG	2 cut(s)	502, 1094
Bst4CI	ACNGT	4 cut(s)	281, 647, 991, 998
Bst6I	CTCTTC	2 cut(s)	42, 158
BstACI	GRCGYC	3 cut(s)	381, 435, 525
BstBAI	YACGTR	1 cut(s)	920
BstBI	TTCGAA	1 cut(s)	621
BstC8I	GCNNGC	7 cut(s)	325, 340, 350, 356, 385, 574, 1128
BstDEI	CTNAG	5 cut(s)	359, 765, 963, 1131, 1265
BstF5I	GGATG	7 cut(s)	156, 192, 243, 617, 760, 937, 1327
BstH2I	RGCGCY	1 cut(s)	384
BstHHI	GCGC	3 cut(s)	354, 383, 484
BstMAI	GTCTC	3 cut(s)	767, 836, 1036
BstMCI	CGRYCG	1 cut(s)	280
BstMWI	GCNNNNNNNGC	5 cut(s)	16, 324, 393, 541, 578
BstNI	CCWGG	2 cut(s)	502, 1094
BstNSI	RCATGY	1 cut(s)	1079
BstSCI	CCNGG	7 cut(s)	461, 500, 576, 607, 1092, 1102, 1103
BstSFI	CTRYAG	1 cut(s)	798
BstV1I	GCAGC	1 cut(s)	327
BstX2I	RGATCY	4 cut(s)	51, 104, 116, 558
BstXI	CCANNNNNNTGG	1 cut(s)	667
BstYI	RGATCY	4 cut(s)	51, 104, 116, 558
BsuRI	GGCC	8 cut(s)	342, 572, 581, 638, 690, 916, 1084, 1180
BtsCI	GGATG	7 cut(s)	156, 192, 243, 617, 760, 937, 1327
BtsIMutI	CAGTG	4 cut(s)	739, 752, 1165, 1262
BveI	ACCTGC	1 cut(s)	863
Cac8I	GCNNGC	7 cut(s)	325, 340, 350, 356, 385, 574, 1128
CfoI	GCGC	3 cut(s)	354, 383, 484
Cfr10I	RCCGGY	4 cut(s)	323, 338, 374, 383
Cfr13I	GGNCC	5 cut(s)	331, 637, 672, 914, 1082
Cfr9I	CCCGGG	1 cut(s)	1103
Csp6I	GTAC	3 cut(s)	601, 729, 994
CspAI	ACCGGT	1 cut(s)	374
CviAII	CATG	2 cut(s)	1076, 1117
CviQI	GTAC	3 cut(s)	601, 729, 994
DdeI	CTNAG	5 cut(s)	359, 765, 963, 1131, 1265
DinI	GGCGCC	1 cut(s)	382
DraI	TTTAAA	1 cut(s)	1314
DrdI	GACNNNNNNGTC	1 cut(s)	440
DseDI	GACNNNNNNGTC	1 cut(s)	440
Eam1104I	CTCTTC	2 cut(s)	42, 158
EarI	CTCTTC	2 cut(s)	42, 158
Ecl136II	GAGCTC	1 cut(s)	511
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	2 cut(s)	234, 513
Eco47I	GGWCC	2 cut(s)	331, 672
Eco53kI	GAGCTC	1 cut(s)	511
Eco57I	CTGAAG	1 cut(s)	118
Eco88I	CYCGRG	1 cut(s)	1103
EcoICRI	GAGCTC	1 cut(s)	511
EcoO109I	RGGNCCY	4 cut(s)	331, 637, 672, 1082
EcoRI	GAATTC	2 cut(s)	1109, 1172
EcoRII	CCWGG	2 cut(s)	500, 1092
EcoT22I	ATGCAT	1 cut(s)	617
EcoT38I	GRGCYC	2 cut(s)	234, 513
EgeI	GGCGCC	1 cut(s)	382
EheI	GGCGCC	1 cut(s)	382
FaeI	CATG	2 cut(s)	1079, 1120
FaqI	GGGAC	4 cut(s)	56, 317, 685, 1287
FatI	CATG	2 cut(s)	1075, 1116
FauI	CCCGC	2 cut(s)	221, 343
FauNDI	CATATG	1 cut(s)	910
Fnu4HI	GCNGC	1 cut(s)	316
FokI	GGATG	7 cut(s)	143, 179, 230, 624, 747, 944, 1334
FriOI	GRGCYC	2 cut(s)	234, 513
Fsp4HI	GCNGC	1 cut(s)	316
FspBI	CTAG	4 cut(s)	686, 711, 726, 1121
GlaI	GCGC	3 cut(s)	353, 382, 483
GluI	GCNGC	1 cut(s)	316
GsuI	CTGGAG	4 cut(s)	182, 406, 566, 776
HaeII	RGCGCY	1 cut(s)	384
HaeIII	GGCC	8 cut(s)	342, 572, 581, 638, 690, 916, 1084, 1180
HapII	CCGG	8 cut(s)	324, 339, 375, 384, 462, 578, 608, 1104
HhaI	GCGC	3 cut(s)	354, 383, 484
Hin1I	GRCGYC	3 cut(s)	381, 435, 525
Hin1II	CATG	2 cut(s)	1079, 1120
Hin6I	GCGC	3 cut(s)	352, 381, 482
HinP1I	GCGC	3 cut(s)	352, 381, 482
HindIII	AAGCTT	1 cut(s)	1018
HinfI	GANTC	6 cut(s)	31, 496, 538, 844, 1154, 1303
HpaII	CCGG	8 cut(s)	324, 339, 375, 384, 462, 578, 608, 1104
HphI	GGTGA	7 cut(s)	364, 451, 758, 815, 1010, 1105, 1300
Hpy166II	GTNNAC	3 cut(s)	592, 994, 1007
Hpy188I	TCNGA	5 cut(s)	137, 229, 558, 768, 1036
Hpy188III	TCNNGA	4 cut(s)	361, 423, 493, 1300
Hpy8I	GTNNAC	3 cut(s)	592, 994, 1007
Hpy99I	CGWCG	7 cut(s)	167, 371, 395, 410, 437, 527, 530
HpyCH4III	ACNGT	4 cut(s)	281, 647, 991, 998
HpyCH4IV	ACGT	3 cut(s)	435, 525, 919
HpyCH4V	TGCA	3 cut(s)	615, 872, 1163
HpyF10VI	GCNNNNNNNGC	5 cut(s)	16, 324, 393, 541, 578
HpyF3I	CTNAG	5 cut(s)	359, 765, 963, 1131, 1265
HpySE526I	ACGT	3 cut(s)	435, 525, 919
Hsp92I	GRCGYC	3 cut(s)	381, 435, 525
Hsp92II	CATG	2 cut(s)	1079, 1120
HspAI	GCGC	3 cut(s)	352, 381, 482
KasI	GGCGCC	1 cut(s)	380
KflI	GGGWCCC	2 cut(s)	331, 672
KroI	GCCGGC	3 cut(s)	323, 338, 383
KroNI	GCCGGC	3 cut(s)	325, 340, 385
LmnI	GCTCC	5 cut(s)	185, 401, 757, 810, 1249
Lsp1109I	GCAGC	1 cut(s)	327
LweI	GCATC	2 cut(s)	602, 769
MaeI	CTAG	4 cut(s)	686, 711, 726, 1121
MaeII	ACGT	3 cut(s)	435, 525, 919
MaeIII	GTNAC	1 cut(s)	370
MboII	GAAGA	5 cut(s)	59, 124, 145, 181, 448
MfeI	CAATTG	1 cut(s)	1149
MflI	RGATCY	4 cut(s)	51, 104, 116, 558
MhlI	GDGCHC	2 cut(s)	234, 513
MluCI	AATT	8 cut(s)	451, 702, 897, 952, 1109, 1149, 1172, 1336
Mly113I	GGCGCC	1 cut(s)	381
MlyI	GAGTC	1 cut(s)	838
Mph1103I	ATGCAT	1 cut(s)	617
MroNI	GCCGGC	3 cut(s)	323, 338, 383
MseI	TTAA	4 cut(s)	678, 719, 1313, 1339
MslI	CAYNNNNRTG	2 cut(s)	867, 922
MspI	CCGG	8 cut(s)	324, 339, 375, 384, 462, 578, 608, 1104
MspR9I	CCNGG	7 cut(s)	463, 502, 578, 609, 1094, 1104, 1105
MunI	CAATTG	1 cut(s)	1149
Mva1269I	GAATGC	1 cut(s)	168
MvaI	CCWGG	2 cut(s)	502, 1094
MwoI	GCNNNNNNNGC	5 cut(s)	16, 324, 393, 541, 578
NaeI	GCCGGC	3 cut(s)	325, 340, 385
NarI	GGCGCC	1 cut(s)	381
NciI	CCSGG	5 cut(s)	463, 578, 609, 1104, 1105
NdeI	CATATG	1 cut(s)	910
NgoMIV	GCCGGC	3 cut(s)	323, 338, 383
NlaIII	CATG	2 cut(s)	1079, 1120
NlaIV	GGNNCC	9 cut(s)	181, 332, 333, 382, 397, 673, 674, 1083, 1251
NmeAIII	GCCGAG	1 cut(s)	324
NmuCI	GTSAC	1 cut(s)	370
NsiI	ATGCAT	1 cut(s)	617
NspI	RCATGY	1 cut(s)	1079
NspV	TTCGAA	1 cut(s)	621
OliI	CACNNNNGTG	1 cut(s)	922
PaqCI	CACCTGC	1 cut(s)	863
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	1 cut(s)	1075
PcsI	WCGNNNNNNNCGW	2 cut(s)	438, 892
PctI	GAATGC	1 cut(s)	168
PdiI	GCCGGC	3 cut(s)	325, 340, 385
PfeI	GAWTC	5 cut(s)	31, 496, 538, 1154, 1303
PfoI	TCCNGGA	1 cut(s)	607
PinAI	ACCGGT	1 cut(s)	374
PkrI	GCNGC	1 cut(s)	317
PleI	GAGTC	1 cut(s)	838
PluTI	GGCGCC	1 cut(s)	384
PpsI	GAGTC	1 cut(s)	838
Ppu21I	YACGTR	1 cut(s)	920
PpuMI	RGGWCCY	2 cut(s)	331, 672
PscI	ACATGT	1 cut(s)	1075
Psp124BI	GAGCTC	1 cut(s)	513
Psp5II	RGGWCCY	2 cut(s)	331, 672
Psp6I	CCWGG	2 cut(s)	500, 1092
PspGI	CCWGG	2 cut(s)	500, 1092
PspN4I	GGNNCC	9 cut(s)	181, 332, 333, 382, 397, 673, 674, 1083, 1251
PspPI	GGNCC	5 cut(s)	331, 637, 672, 914, 1082
PspPPI	RGGWCCY	2 cut(s)	331, 672
PsuI	RGATCY	4 cut(s)	51, 104, 116, 558
RsaI	GTAC	3 cut(s)	602, 730, 995
RsaNI	GTAC	3 cut(s)	601, 729, 994
RseI	CAYNNNNRTG	2 cut(s)	867, 922
SacI	GAGCTC	1 cut(s)	513
SaqAI	TTAA	4 cut(s)	678, 719, 1313, 1339
SatI	GCNGC	1 cut(s)	316
Sau96I	GGNCC	5 cut(s)	331, 637, 672, 914, 1082
SchI	GAGTC	1 cut(s)	838
ScrFI	CCNGG	7 cut(s)	463, 502, 578, 609, 1094, 1104, 1105
SduI	GDGCHC	2 cut(s)	234, 513
SfaNI	GCATC	2 cut(s)	602, 769
SfcI	CTRYAG	1 cut(s)	798
SfiI	GGCCNNNNNGGCC	1 cut(s)	578
SfoI	GGCGCC	1 cut(s)	382
SfuI	TTCGAA	1 cut(s)	621
SgrAI	CRCCGGYG	1 cut(s)	374
SinI	GGWCC	2 cut(s)	331, 672
SmaI	CCCGGG	1 cut(s)	1105
SmiMI	CAYNNNNRTG	2 cut(s)	867, 922
SpeI	ACTAGT	1 cut(s)	725
Sse9I	AATT	8 cut(s)	451, 702, 897, 952, 1109, 1149, 1172, 1336
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	5 cut(s)	214, 291, 313, 336, 973
SspDI	GGCGCC	1 cut(s)	380
SspMI	CTAG	4 cut(s)	686, 711, 726, 1121
SstI	GAGCTC	1 cut(s)	513
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	7 cut(s)	461, 500, 576, 607, 1092, 1102, 1103
TaaI	ACNGT	4 cut(s)	281, 647, 991, 998
TaiI	ACGT	3 cut(s)	438, 528, 922
TaqI	TCGA	6 cut(s)	408, 507, 552, 621, 865, 895
TasI	AATT	8 cut(s)	451, 702, 897, 952, 1109, 1149, 1172, 1336
TatI	WGTACW	1 cut(s)	600
TfiI	GAWTC	5 cut(s)	31, 496, 538, 1154, 1303
Tru1I	TTAA	4 cut(s)	678, 719, 1313, 1339
Tru9I	TTAA	4 cut(s)	678, 719, 1313, 1339
TscAI	CASTG	4 cut(s)	739, 759, 1165, 1269
TseFI	GTSAC	1 cut(s)	370
TseI	GCWGC	1 cut(s)	315
Tsp45I	GTSAC	1 cut(s)	370
TspDTI	ATGAA	4 cut(s)	17, 145, 181, 1338
TspMI	CCCGGG	1 cut(s)	1103
TspRI	CASTG	4 cut(s)	739, 759, 1165, 1269
VpaK11BI	GGWCC	2 cut(s)	331, 672
XapI	RAATTY	3 cut(s)	897, 1109, 1172
XceI	RCATGY	1 cut(s)	1079
XmaI	CCCGGG	1 cut(s)	1103
XspI	CTAG	4 cut(s)	686, 711, 726, 1121
ZraI	GACGTC	2 cut(s)	436, 526
Zsp2I	ATGCAT	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.