Prupe.6G247300_v2.0.a1

UDP-glucuronic acid decarboxylase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
24371976 .. 24376121
4146 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G247300.2

Sequence Viewer

Length: 1299 bp
ATGAAGCAATTGCACAAGCAAGCGAGCGTGAATCAAAGGAGGGACGAAGAGATCCCATCAAACCTAGCCTCAACCTACTCTCCCAAGGCTCTCAAACACCCTCGATCTCTCCCCAGATCCATCAACTACCTCTTCAAAGAACAGAGGCTCCTCTTCATCCTCGTCGGCATTCTCATCGGCTCCACCTTCTTCATCCTCCAGCCCACCCTTTACCGACTCGGCCCATCTGACCCCAACAACCCCACCACCTCCATCTCCAGATCCTTCTCCACCGCCCATGACCTCGTCCCCAAGCCCACCCATGCAAAGGTGGGTCGGGTCCCCGTCGGGCTCGGCAAGCGGAGGCTCCGAATTGTCGTCACCGGCGGTGCTGGGTTCGTTGGGTCTCATCTTGTTGACAAGCTCCTTGACAGGGGCAACGACGTGATTGTGATTGATAATTTCTTTACCGGGAGGAAGGATAATCTGGTGCACCATTTTGGGAACCCAAGGTTCGAGCTCATTAGGCATGACGTCGTTGAGCCGATTCTGCTGGAGGTCGATCAGATCTACCACTTGGCCTGCCCTGCCTCCCCTGTTCATTATAAGTATAACCCAGTCAAGACCATTAAGACCAATGTGATGGGTACTCTTAATATGCTGGGACTTGCCAAGCGAATTGGGGCAAGGTTTTTGCTCACCAGTACGAGTGAGGTGTATGGGGACCCCCTGGAGCATCCTCAGAAGGAGACTTACTGGGGAAATGTAAATCCTATAGGTGAGAGGAGCTGTTATGATGAAGGAAAGAGGACAGCAGAGACATTGGCAATGGATTATCATCGAGGTGCAGATGTCGAGGTCCGTATTGCTCGAATTTTCAACACTTATGGTCCGCGTATGTGTTTGGATGATGGGCGTGTTGTCAGCAATTTTGTTGCTCAGGCTATCCGCAGACAACCATTGACTGTGTACGGTGATGGTAAACAAACACGAAGCTTCCAATATGTCTCTGATTTGGTCAATGGACTGGTGGCATTGATGGACGGTGAACATGTGGGGCCGTTCAACCTGGGTAATCCAGGGGAGTTCACCATGCTAGAGCTTGCTGAGGTTGTCAAAGAAACAATTGATTCAAGTGCGACAATAGAATTCAGACCAAATACTGCTGATGATCCACATAAGAGGAAACCTGACATTAGCAAAGCAAAGGAGCTATTGAACTGGGAGCCAAAGGTGTCCTTGAGGGAGGGACTGCCTCTTATGGTGAGCGATTTCCAGAATCGCATTTTAAACGAAGACGAAGGAAAAGCCATTAATTAA

Protein Analysis

433

Amino Acids

48.49

Weight (kDa)

9.01

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 585
AatII GACGTC 1 cut(s) 516
AccII CGCG 1 cut(s) 874
AciI CCGC 5 cut(s) 273, 340, 366, 872, 928
AclWI GGATC 4 cut(s) 46, 111, 255, 1145
AcsI RAATTY 2 cut(s) 852, 1127
AcyI GRCGYC 1 cut(s) 513
AfaI GTAC 3 cut(s) 628, 685, 950
AfiI CCNNNNNNNGG 2 cut(s) 307, 412
AflIII ACRYGT 1 cut(s) 1030
AgsI TTSAA 5 cut(s) 136, 859, 1045, 1113, 1198
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 3 cut(s) 708, 1047, 1057
AloI GAACNNNNNNTCC 2 cut(s) 132, 164
AluBI AGCT 6 cut(s) 403, 499, 768, 975, 1081, 1192
AluI AGCT 6 cut(s) 403, 499, 768, 975, 1081, 1192
Alw21I GWGCWC 2 cut(s) 474, 501
Alw26I GTCTC 4 cut(s) 390, 722, 791, 991
Alw44I GTGCAC 1 cut(s) 470
AlwI GGATC 4 cut(s) 46, 111, 255, 1145
AoxI GGCC 3 cut(s) 220, 558, 1037
ApaLI GTGCAC 1 cut(s) 470
ApoI RAATTY 2 cut(s) 852, 1127
AseI ATTAAT 1 cut(s) 1293
AspS9I GGNCC 6 cut(s) 221, 319, 703, 838, 869, 1037
AsuC2I CCSGG 1 cut(s) 451
AsuHPI GGTGA 7 cut(s) 352, 670, 770, 965, 1037, 1060, 1255
AvaII GGWCC 4 cut(s) 319, 703, 838, 869
BaeGI GKGCMC 1 cut(s) 474
BanII GRGCYC 2 cut(s) 333, 501
BarI GAAGNNNNNNTAC 2 cut(s) 716, 748
BbsI GAAGAC 1 cut(s) 1281
Bbv12I GWGCWC 2 cut(s) 474, 501
BbvCI CCTCAGC 1 cut(s) 1086
BccI CCATC 8 cut(s) 64, 128, 232, 260, 616, 884, 950, 1012
BceAI ACGGC 1 cut(s) 1024
BcgI CGANNNNNNTGC 2 cut(s) 157, 191
BciT130I CCWGG 3 cut(s) 710, 1049, 1059
BcnI CCSGG 1 cut(s) 451
BcoDI GTCTC 4 cut(s) 390, 722, 791, 991
BfaI CTAG 2 cut(s) 65, 1076
BfmI CTRYAG 1 cut(s) 753
BglII AGATCT 1 cut(s) 546
Bme1390I CCNGG 4 cut(s) 451, 710, 1049, 1059
Bme18I GGWCC 4 cut(s) 319, 703, 838, 869
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 6 cut(s) 221, 319, 703, 838, 869, 1037
BmrFI CCNGG 4 cut(s) 451, 710, 1049, 1059
BmrI ACTGGG 3 cut(s) 590, 745, 1210
BmsI GCATC 1 cut(s) 724
BmuI ACTGGG 3 cut(s) 590, 745, 1210
BpiI GAAGAC 1 cut(s) 1281
BpmI CTGGAG 4 cut(s) 182, 241, 554, 731
Bpu10I CCTNAGC 2 cut(s) 918, 1086
BpuEI CTTGAG 1 cut(s) 1240
BpuMI CCSGG 1 cut(s) 451
BsaBI GATNNNNATC 1 cut(s) 816
BsaHI GRCGYC 1 cut(s) 513
BsaI GGTCTC 1 cut(s) 390
BsaJI CCNNGG 5 cut(s) 84, 488, 708, 1048, 1058
BsaXI ACNNNNNCTCC 4 cut(s) 64, 94, 132, 162
Bsc4I CCNNNNNNNGG 2 cut(s) 307, 412
Bse118I RCCGGY 1 cut(s) 362
Bse1I ACTGG 5 cut(s) 596, 681, 740, 1011, 1205
Bse3DI GCAATG 1 cut(s) 813
Bse8I GATNNNNATC 1 cut(s) 816
BseBI CCWGG 3 cut(s) 710, 1049, 1059
BseDI CCNNGG 5 cut(s) 84, 488, 708, 1048, 1058
BseGI GGATG 4 cut(s) 156, 192, 715, 892
BseJI GATNNNNATC 1 cut(s) 816
BseLI CCNNNNNNNGG 2 cut(s) 307, 412
BseMI GCAATG 1 cut(s) 813
BseMII CTCAG 3 cut(s) 734, 932, 1077
BseNI ACTGG 5 cut(s) 596, 681, 740, 1011, 1205
BseRI GAGGAG 2 cut(s) 140, 778
BseSI GKGCMC 1 cut(s) 474
BseYI CCCAGC 2 cut(s) 371, 640
BsgI GTGCAG 1 cut(s) 846
Bsh1236I CGCG 1 cut(s) 874
BshFI GGCC 3 cut(s) 222, 560, 1039
BsiHKAI GWGCWC 2 cut(s) 474, 501
BsiSI CCGG 2 cut(s) 363, 450
BslFI GGGAC 6 cut(s) 56, 272, 305, 657, 716, 1242
BslI CCNNNNNNNGG 2 cut(s) 307, 412
BsmAI GTCTC 4 cut(s) 390, 722, 791, 991
BsmFI GGGAC 6 cut(s) 56, 272, 305, 657, 716, 1242
BsmI GAATGC 1 cut(s) 168
BsnI GGCC 3 cut(s) 222, 560, 1039
Bso31I GGTCTC 1 cut(s) 390
Bsp1286I GDGCHC 3 cut(s) 333, 474, 501
Bsp143I GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
BspACI CCGC 5 cut(s) 273, 340, 366, 872, 928
BspANI GGCC 3 cut(s) 222, 560, 1039
BspCNI CTCAG 3 cut(s) 733, 931, 1078
BspFNI CGCG 1 cut(s) 874
BspPI GGATC 4 cut(s) 46, 111, 255, 1145
BspTNI GGTCTC 1 cut(s) 390
BsrDI GCAATG 1 cut(s) 813
BsrFI RCCGGY 1 cut(s) 362
BsrI ACTGG 5 cut(s) 596, 681, 740, 1011, 1205
BssAI RCCGGY 1 cut(s) 362
BssECI CCNNGG 5 cut(s) 84, 488, 708, 1048, 1058
BssMI GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
BssNI GRCGYC 1 cut(s) 513
BssT1I CCWWGG 2 cut(s) 84, 488
Bst2UI CCWGG 3 cut(s) 710, 1049, 1059
Bst4CI ACNGT 3 cut(s) 946, 953, 1025
Bst6I CTCTTC 3 cut(s) 42, 137, 158
BstACI GRCGYC 1 cut(s) 513
BstC8I GCNNGC 5 cut(s) 21, 25, 338, 562, 1083
BstDEI CTNAG 3 cut(s) 720, 918, 1086
BstF5I GGATG 4 cut(s) 156, 192, 715, 892
BstFNI CGCG 1 cut(s) 874
BstKTI GATC 7 cut(s) 54, 107, 119, 263, 544, 549, 1153
BstMAI GTCTC 4 cut(s) 390, 722, 791, 991
BstMBI GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
BstMWI GCNNNNNNNGC 4 cut(s) 337, 505, 529, 566
BstNI CCWGG 3 cut(s) 710, 1049, 1059
BstNSI RCATGY 1 cut(s) 1034
BstSCI CCNGG 4 cut(s) 449, 708, 1047, 1057
BstSFI CTRYAG 1 cut(s) 753
BstSLI GKGCMC 1 cut(s) 474
BstUI CGCG 1 cut(s) 874
BstV2I GAAGAC 1 cut(s) 1281
BstX2I RGATCY 4 cut(s) 51, 116, 260, 546
BstXI CCANNNNNNTGG 1 cut(s) 622
BstYI RGATCY 4 cut(s) 51, 116, 260, 546
BsuRI GGCC 3 cut(s) 222, 560, 1039
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 4 cut(s) 156, 192, 715, 892
Cac8I GCNNGC 5 cut(s) 21, 25, 338, 562, 1083
Cfr10I RCCGGY 1 cut(s) 362
Cfr13I GGNCC 6 cut(s) 221, 319, 703, 838, 869, 1037
Csp6I GTAC 3 cut(s) 627, 684, 949
CviAII CATG 5 cut(s) 278, 302, 509, 1031, 1072
CviQI GTAC 3 cut(s) 627, 684, 949
DdeI CTNAG 3 cut(s) 720, 918, 1086
DpnI GATC 7 cut(s) 53, 106, 118, 262, 543, 548, 1152
DpnII GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
DraI TTTAAA 1 cut(s) 1269
Eam1104I CTCTTC 3 cut(s) 42, 137, 158
EarI CTCTTC 3 cut(s) 42, 137, 158
Ecl136II GAGCTC 1 cut(s) 499
Eco130I CCWWGG 2 cut(s) 84, 488
Eco24I GRGCYC 2 cut(s) 333, 501
Eco31I GGTCTC 1 cut(s) 390
Eco47I GGWCC 4 cut(s) 319, 703, 838, 869
Eco53kI GAGCTC 1 cut(s) 499
EcoICRI GAGCTC 1 cut(s) 499
EcoO109I RGGNCCY 2 cut(s) 319, 703
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 3 cut(s) 708, 1047, 1057
EcoT14I CCWWGG 2 cut(s) 84, 488
EcoT38I GRGCYC 2 cut(s) 333, 501
ErhI CCWWGG 2 cut(s) 84, 488
FaeI CATG 5 cut(s) 281, 305, 512, 1034, 1075
FalI AAGNNNNNCTT 2 cut(s) 1202, 1234
FaqI GGGAC 6 cut(s) 56, 272, 305, 657, 716, 1242
FatI CATG 5 cut(s) 277, 301, 508, 1030, 1071
FokI GGATG 4 cut(s) 143, 179, 702, 899
FriOI GRGCYC 2 cut(s) 333, 501
FspBI CTAG 2 cut(s) 65, 1076
GsaI CCCAGC 2 cut(s) 375, 644
GsuI CTGGAG 4 cut(s) 182, 241, 554, 731
HaeIII GGCC 3 cut(s) 222, 560, 1039
HapII CCGG 2 cut(s) 363, 450
Hin1I GRCGYC 1 cut(s) 513
Hin1II CATG 5 cut(s) 281, 305, 512, 1034, 1075
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 973
HinfI GANTC 5 cut(s) 31, 216, 526, 1109, 1258
HpaII CCGG 2 cut(s) 363, 450
HphI GGTGA 7 cut(s) 352, 670, 770, 965, 1037, 1060, 1255
Hpy166II GTNNAC 6 cut(s) 397, 472, 949, 962, 1028, 1068
Hpy188I TCNGA 6 cut(s) 229, 350, 546, 723, 991, 1133
Hpy188III TCNNGA 3 cut(s) 258, 601, 1255
Hpy8I GTNNAC 6 cut(s) 397, 472, 949, 962, 1028, 1068
Hpy99I CGWCG 4 cut(s) 167, 329, 425, 518
HpyAV CCTTC 6 cut(s) 196, 274, 451, 718, 773, 1274
HpyCH4III ACNGT 3 cut(s) 946, 953, 1025
HpyCH4IV ACGT 2 cut(s) 423, 513
HpyCH4V TGCA 4 cut(s) 13, 305, 472, 827
HpyF10VI GCNNNNNNNGC 4 cut(s) 337, 505, 529, 566
HpyF3I CTNAG 3 cut(s) 720, 918, 1086
HpySE526I ACGT 2 cut(s) 423, 513
Hsp92I GRCGYC 1 cut(s) 513
Hsp92II CATG 5 cut(s) 281, 305, 512, 1034, 1075
KflI GGGWCCC 2 cut(s) 319, 703
Kzo9I GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
LmnI GCTCC 8 cut(s) 153, 185, 351, 408, 712, 765, 1189, 1204
LweI GCATC 1 cut(s) 724
MaeI CTAG 2 cut(s) 65, 1076
MaeII ACGT 2 cut(s) 423, 513
MaeIII GTNAC 1 cut(s) 358
MalI GATC 7 cut(s) 53, 106, 118, 262, 543, 548, 1152
MboI GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
MboII GAAGA 5 cut(s) 59, 124, 145, 181, 1286
MfeI CAATTG 2 cut(s) 8, 1104
MflI RGATCY 4 cut(s) 51, 116, 260, 546
MhlI GDGCHC 3 cut(s) 333, 474, 501
MluCI AATT 9 cut(s) 8, 351, 439, 657, 852, 907, 1104, 1127, 1294
MlyI GAGTC 1 cut(s) 210
MseI TTAA 5 cut(s) 609, 633, 1268, 1293, 1297
MslI CAYNNNNRTG 1 cut(s) 822
MspI CCGG 2 cut(s) 363, 450
MspR9I CCNGG 4 cut(s) 451, 710, 1049, 1059
MunI CAATTG 2 cut(s) 8, 1104
Mva1269I GAATGC 1 cut(s) 168
MvaI CCWGG 3 cut(s) 710, 1049, 1059
MvnI CGCG 1 cut(s) 874
MwoI GCNNNNNNNGC 4 cut(s) 337, 505, 529, 566
NciI CCSGG 1 cut(s) 451
NdeII GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
NlaIII CATG 5 cut(s) 281, 305, 512, 1034, 1075
NmeAIII GCCGAG 2 cut(s) 198, 312
NmuCI GTSAC 1 cut(s) 358
NspI RCATGY 1 cut(s) 1034
PacI TTAATTAA 1 cut(s) 1297
PciI ACATGT 1 cut(s) 1030
PctI GAATGC 1 cut(s) 168
PfeI GAWTC 4 cut(s) 31, 526, 1109, 1258
PflFI GACNNNGTC 1 cut(s) 284
PleI GAGTC 1 cut(s) 210
PpsI GAGTC 1 cut(s) 210
PpuMI RGGWCCY 2 cut(s) 319, 703
PscI ACATGT 1 cut(s) 1030
PshBI ATTAAT 1 cut(s) 1293
PsiI TTATAA 1 cut(s) 585
Psp124BI GAGCTC 1 cut(s) 501
Psp5II RGGWCCY 2 cut(s) 319, 703
Psp6I CCWGG 3 cut(s) 708, 1047, 1057
PspFI CCCAGC 2 cut(s) 371, 640
PspGI CCWGG 3 cut(s) 708, 1047, 1057
PspPI GGNCC 6 cut(s) 221, 319, 703, 838, 869, 1037
PspPPI RGGWCCY 2 cut(s) 319, 703
PsuI RGATCY 4 cut(s) 51, 116, 260, 546
PsyI GACNNNGTC 1 cut(s) 284
RsaI GTAC 3 cut(s) 628, 685, 950
RsaNI GTAC 3 cut(s) 627, 684, 949
RseI CAYNNNNRTG 1 cut(s) 822
SacI GAGCTC 1 cut(s) 501
SaqAI TTAA 5 cut(s) 609, 633, 1268, 1293, 1297
Sau3AI GATC 7 cut(s) 51, 104, 116, 260, 541, 546, 1150
Sau96I GGNCC 6 cut(s) 221, 319, 703, 838, 869, 1037
SchI GAGTC 1 cut(s) 210
ScrFI CCNGG 4 cut(s) 451, 710, 1049, 1059
SduI GDGCHC 3 cut(s) 333, 474, 501
SfaNI GCATC 1 cut(s) 724
SfcI CTRYAG 1 cut(s) 753
SgrAI CRCCGGYG 1 cut(s) 362
SinI GGWCC 4 cut(s) 319, 703, 838, 869
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 1 cut(s) 1219
SmoI CTYRAG 1 cut(s) 1219
Sse9I AATT 9 cut(s) 8, 351, 439, 657, 852, 907, 1104, 1127, 1294
SsiI CCGC 5 cut(s) 273, 340, 366, 872, 928
SspMI CTAG 2 cut(s) 65, 1076
SstI GAGCTC 1 cut(s) 501
StyD4I CCNGG 4 cut(s) 449, 708, 1047, 1057
StyI CCWWGG 2 cut(s) 84, 488
TaaI ACNGT 3 cut(s) 946, 953, 1025
TaiI ACGT 2 cut(s) 426, 516
TaqI TCGA 6 cut(s) 103, 495, 540, 820, 834, 850
TasI AATT 9 cut(s) 8, 351, 439, 657, 852, 907, 1104, 1127, 1294
TfiI GAWTC 4 cut(s) 31, 526, 1109, 1258
Tru1I TTAA 5 cut(s) 609, 633, 1268, 1293, 1297
Tru9I TTAA 5 cut(s) 609, 633, 1268, 1293, 1297
TseFI GTSAC 1 cut(s) 358
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 5 cut(s) 17, 145, 181, 569, 792
TspGWI ACGGA 1 cut(s) 830
Tth111I GACNNNGTC 1 cut(s) 284
VneI GTGCAC 1 cut(s) 470
VpaK11BI GGWCC 4 cut(s) 319, 703, 838, 869
VspI ATTAAT 1 cut(s) 1293
XapI RAATTY 2 cut(s) 852, 1127
XceI RCATGY 1 cut(s) 1034
XspI CTAG 2 cut(s) 65, 1076
ZraI GACGTC 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.