Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0008792

Physical Location & Seq

Genomic Coordinates Forward (+)

663498 .. 665324

Gene Structure 1827 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1010900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGTCCATCGCCAGTTCTGCTGCAACTTCAGCAGACTGGTCTTCTGCTTGCGTGATCTCATCCAAAAATCCTCACAAATTTCACTTCCTCGCATCATTCAAAACCCATTTATTCTATTCCATTAATCCCACTTGCTATAGCAATAATCTCCGAGTTTTCAATGCAAATTTAACCAATTTTCCCGTCATTGAATTGGACTTGAAGTTACAAAACTCCCCAGAAGAATGTCCAGCTCCAACGCCGGGTGCCGAGGACTCGAACGATTTCATATGTGGCTTGTTTCAGAATCCTCAGACGGAAGAATGCGCCTACGATCACTACGAGAAAGCCCGAAAGAAGCCTGAATTCAGACCAAACAAATCGACATTGGAGCAGCTGATAAGGTACTTGATCCGTTCCAATAAATGGGGTTTGTTTATTTCGGTTTTTGAGGATTTTAAGAATTATGAAGTAGTGCCTGATGGCTATACTTGCTCTAGATTGGTCACTAGCTGCATTAGAGCTAGGAAGTTCAAAATTGTTAGGATTTTGCTTGATGTGTTTAGTGATCACGGAGATGAAGTTGCTGTCCCGGCTTTTGATTCGACGATGAGAGGATATAATGAGCTTCATATGTTTAAAAGCACGATTTCCGTGTTTGAACGGATGGAATCCGATGGAATTACTGCGAATTCCGGATGCTATTGCCGGATCATGGAAGCTTATATGAAAAAGGGTGATTGCAGAAAAGTTAATGAATTGTTTGAAGAAATGAAAAGTAGGGAATTAGATTTGGTGCCTTTTTCTACTCAAATATACGGAATTTTATGTGAATCACTGTGCAAATTGGGACAGCCCTTTGAAGCTCTTGAGATTTTCCGAAGTGTGACGGAGAGAGGAGTTTATTTAGAATCTTCAAAGATTTACTCTCTGCTGATTTGTTCATTCGCAAGCATTCGAGAAGTAGGGGTGGCTGAAGAGCTTTTTGAAGAAGGAGAGAGCAAGAAATTGTTGAAGGATCCGAGTTTGTTTTTAAAAATGATATCAATGTATGTGGAAGAAGGGTTGACAGAGAAGACTCTCGGAGTAGTTAAGGTGATGAAGGGTGCGAATATCAGGGTTTCCGACAATATATGCTGTGCGGTTGTTAGTGGCTTCTCTAGGAAAAATCGACTCCTGACCGCTGTTAAATTTTTCGAAGATTTGGTGTCGATGGGCTGCCAGCCAGGGCAAGTGACATACGCGTCCATCATCAATGTCTATTGCCGCCTAGGGCTTAACTCGAAGGCGGAAATGGTTTTTGAGGAGATGGAGGAAAAGGGGTTTGGAAAATGTGCTGTGGCATATTCTAGCATGGTTGTGATGTACGGGAAAACAGGGAGGCCAAGAGATGCAATGAGGCTTGTGGCGAAGATGAAAGAAAGAGGGTGTAAGCCGAACGTATGGATATACAATTCTTTGATGGATATGCATGGAAGGGACAAGAATTTGAGGCAGGTTTCGAAGATTTGGACGGAAATGAAGCGAAGGAAGGTAGTGCCGGATAAAGTAAGCTACACGACGGTTATAAGTGCTTACAACAAGGCAGGGGAGTTTGAAATGTGTATGAAATATTACCATGAGTTTAGGGTTCATGGGGGTGTTTTGGACAAGGCTTTGGCTGGAATGATGGTTGGGATTTTTTCGAAGACGGGCCGGATTGATGAGCTGGTGAAGCTTTTGAGAGATATGAAATCGGAAGGGATGGCGTTGGATGGGAGGCTTTACCGGTCAGCCTTGAATGCTTTGACAGATTCGGGGCTGGAAATGCAGGTAAAATGGCTGCAAGGTAGCTTTAAGGTTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

609

Amino Acids

69.02

Weight (kDa)

8.5

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	374 - 416	4.8e-07	PPR repeat family
PPR_long	PF17177	380 - 536	6.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	398 - 431	5.6e-09	PPR repeat
PPR_2	PF13041	402 - 435	6.8e-06	PPR repeat family
PPR	PF01535	405 - 435	1.7e-07	PPR repeat
PPR_3	PF13812	426 - 485	5.8e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	438 - 474	2.1e-07	PPR repeat family
PPR	PF01535	440 - 470	1e-05	PPR repeat
PPR_2	PF13041	472 - 519	2.8e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13770
fragaria_vesca	FvH4_4g36140
malus_domestica	MD13G1010900.v1.1 MD16G1008400.v1.1
prunus_persica	Prupe.1G342100_v2.0.a1
pyrus_communis	pycom16g00820
rosa_chinensis	RchiOBHm_Chr4g0445881
rosa_laevigata	RLG00000005705
rosa_multiflora	Rmu_co8340621.1_g000001 Rmu_sc0000961.1_g000004 Rmu_sc0000961.1_g000009
rosa_roxburghii	Rroxscaffold_5G00386320
rosa_rugosa	Rorug04G0365400
rosa_samantha	Rh4AG427200 Rh4BG437000 Rh4BG437400 Rh4BG437500 Rh4CG453700 Rh4CG453800 Rh4CG454200 Rh4DG435500
rosa_wichuraiana	Rw4G036550 Rw4G036580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1547
AasI	GACNNNNNNGTC	1 cut(s)	1222
Acc36I	ACCTGC	2 cut(s)	1465, 1780
AccB1I	GGYRCC	2 cut(s)	245, 775
AccB7I	CCANNNNNTGG	1 cut(s)	405
AccII	CGCG	1 cut(s)	1223
AccIII	TCCGGA	1 cut(s)	674
AciI	CCGC	4 cut(s)	1121, 1161, 1246, 1268
AclWI	GGATC	4 cut(s)	385, 698, 992, 1005
AcsI	RAATTY	7 cut(s)	77, 166, 344, 670, 801, 1169, 1465
AcuI	CTGAAG	2 cut(s)	12, 975
AfaI	GTAC	2 cut(s)	386, 1346
AfiI	CCNNNNNNNGG	3 cut(s)	242, 405, 694
AflIII	ACRYGT	1 cut(s)	1221
AgeI	ACCGGT	1 cut(s)	1746
AjnI	CCWGG	1 cut(s)	1204
AjuI	GAANNNNNNNTTGG	2 cut(s)	1287, 1319
AlwI	GGATC	4 cut(s)	385, 698, 992, 1005
Aor13HI	TCCGGA	1 cut(s)	674
AoxI	GGCC	2 cut(s)	1361, 1672
ApeKI	GCWGC	5 cut(s)	20, 373, 492, 1197, 1801
ApoI	RAATTY	7 cut(s)	77, 166, 344, 670, 801, 1169, 1465
AseI	ATTAAT	1 cut(s)	123
AsiGI	ACCGGT	1 cut(s)	1746
Asp700I	GAANNNNTTC	1 cut(s)	263
AspA2I	CCTAGG	1 cut(s)	1249
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	1 cut(s)	1672
AsuC2I	CCSGG	2 cut(s)	243, 572
AsuHPI	GGTGA	3 cut(s)	728, 1087, 1702
AsuII	TTCGAA	3 cut(s)	1176, 1481, 1664
AvrII	CCTAGG	1 cut(s)	1249
BamHI	GGATCC	1 cut(s)	997
BanI	GGYRCC	2 cut(s)	245, 775
BbsI	GAAGAC	3 cut(s)	33, 1061, 1673
BbvI	GCAGC	5 cut(s)	7, 385, 479, 1184, 1788
BciT130I	CCWGG	1 cut(s)	1206
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	2 cut(s)	243, 572
BfaI	CTAG	6 cut(s)	477, 489, 504, 1140, 1250, 1329
BfmI	CTRYAG	1 cut(s)	136
BfuAI	ACCTGC	2 cut(s)	1465, 1780
BisI	GCNGC	6 cut(s)	21, 374, 493, 1198, 1246, 1802
BlnI	CCTAGG	1 cut(s)	1249
BlsI	GCNGC	6 cut(s)	22, 375, 494, 1199, 1247, 1803
Bme1390I	CCNGG	3 cut(s)	243, 572, 1206
BmgT120I	GGNCC	1 cut(s)	1672
BmiI	GGNNCC	3 cut(s)	247, 777, 999
BmrFI	CCNGG	3 cut(s)	243, 572, 1206
BmsI	GCATC	3 cut(s)	101, 668, 1360
BpiI	GAAGAC	3 cut(s)	33, 1061, 1673
Bpu14I	TTCGAA	3 cut(s)	1176, 1481, 1664
BpuEI	CTTGAG	1 cut(s)	869
BpuMI	CCSGG	2 cut(s)	243, 572
BsaJI	CCNNGG	3 cut(s)	249, 1205, 1249
BsaWI	WCCGGW	2 cut(s)	674, 1746
BsaXI	ACNNNNNCTCC	2 cut(s)	546, 576
Bsc4I	CCNNNNNNNGG	3 cut(s)	242, 405, 694
Bse118I	RCCGGY	1 cut(s)	1746
Bse1I	ACTGG	2 cut(s)	12, 41
Bse3DI	GCAATG	1 cut(s)	1380
BseAI	TCCGGA	1 cut(s)	674
BseBI	CCWGG	1 cut(s)	1206
BseDI	CCNNGG	3 cut(s)	249, 1205, 1249
BseGI	GGATG	5 cut(s)	59, 651, 683, 1728, 1738
BseLI	CCNNNNNNNGG	3 cut(s)	242, 405, 694
BseMI	GCAATG	1 cut(s)	1380
BseMII	CTCAG	1 cut(s)	305
BseNI	ACTGG	2 cut(s)	12, 41
BseRI	GAGGAG	2 cut(s)	891, 1298
BseXI	GCAGC	5 cut(s)	7, 385, 479, 1184, 1788
Bsh1236I	CGCG	1 cut(s)	1223
BshFI	GGCC	2 cut(s)	1363, 1674
BshNI	GGYRCC	2 cut(s)	245, 775
BshTI	ACCGGT	1 cut(s)	1746
BsiSI	CCGG	7 cut(s)	242, 572, 675, 688, 1520, 1675, 1747
BslFI	GGGAC	3 cut(s)	554, 843, 1472
BslI	CCNNNNNNNGG	3 cut(s)	242, 405, 694
BsmFI	GGGAC	3 cut(s)	554, 843, 1472
BsmI	GAATGC	3 cut(s)	308, 933, 1765
BsnI	GGCC	2 cut(s)	1363, 1674
Bsp119I	TTCGAA	3 cut(s)	1176, 1481, 1664
Bsp13I	TCCGGA	1 cut(s)	674
Bsp143I	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
BspACI	CCGC	4 cut(s)	1121, 1161, 1246, 1268
BspANI	GGCC	2 cut(s)	1363, 1674
BspCNI	CTCAG	1 cut(s)	304
BspEI	TCCGGA	1 cut(s)	674
BspFNI	CGCG	1 cut(s)	1223
BspLI	GGNNCC	3 cut(s)	247, 777, 999
BspMI	ACCTGC	2 cut(s)	1465, 1780
BspPI	GGATC	4 cut(s)	385, 698, 992, 1005
BspQI	GCTCTTC	1 cut(s)	951
BspT104I	TTCGAA	3 cut(s)	1176, 1481, 1664
BspT107I	GGYRCC	2 cut(s)	245, 775
BsrDI	GCAATG	1 cut(s)	1380
BsrFI	RCCGGY	1 cut(s)	1746
BsrI	ACTGG	2 cut(s)	12, 41
BssAI	RCCGGY	1 cut(s)	1746
BssECI	CCNNGG	3 cut(s)	249, 1205, 1249
BssMI	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
BssT1I	CCWWGG	1 cut(s)	1249
Bst2UI	CCWGG	1 cut(s)	1206
Bst4CI	ACNGT	2 cut(s)	819, 1543
Bst6I	CTCTTC	1 cut(s)	951
BstBI	TTCGAA	3 cut(s)	1176, 1481, 1664
BstC8I	GCNNGC	3 cut(s)	49, 931, 1202
BstDEI	CTNAG	1 cut(s)	291
BstF5I	GGATG	5 cut(s)	59, 651, 683, 1728, 1738
BstFNI	CGCG	1 cut(s)	1223
BstHHI	GCGC	1 cut(s)	308
BstKTI	GATC	6 cut(s)	57, 316, 393, 550, 693, 1000
BstMBI	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
BstMWI	GCNNNNNNNGC	7 cut(s)	17, 29, 471, 572, 1693, 1760, 1786
BstNI	CCWGG	1 cut(s)	1206
BstSCI	CCNGG	3 cut(s)	241, 570, 1204
BstSFI	CTRYAG	1 cut(s)	136
BstUI	CGCG	1 cut(s)	1223
BstV1I	GCAGC	5 cut(s)	7, 385, 479, 1184, 1788
BstV2I	GAAGAC	3 cut(s)	33, 1061, 1673
BstX2I	RGATCY	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	997
BsuRI	GGCC	2 cut(s)	1363, 1674
BtsCI	GGATG	5 cut(s)	59, 651, 683, 1728, 1738
BtsIMutI	CAGTG	1 cut(s)	815
BveI	ACCTGC	2 cut(s)	1465, 1780
Cac8I	GCNNGC	3 cut(s)	49, 931, 1202
CfoI	GCGC	1 cut(s)	308
Cfr10I	RCCGGY	1 cut(s)	1746
Cfr13I	GGNCC	1 cut(s)	1672
CseI	GACGC	1 cut(s)	1212
Csp6I	GTAC	2 cut(s)	385, 1345
CspAI	ACCGGT	1 cut(s)	1746
CspCI	CAANNNNNGTGG	2 cut(s)	1014, 1049
CviAII	CATG	5 cut(s)	694, 1333, 1451, 1598, 1613
CviQI	GTAC	2 cut(s)	385, 1345
DdeI	CTNAG	1 cut(s)	291
DpnI	GATC	6 cut(s)	56, 315, 392, 549, 692, 999
DpnII	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
DraI	TTTAAA	2 cut(s)	619, 1014
DrdI	GACNNNNNNGTC	1 cut(s)	1222
DseDI	GACNNNNNNGTC	1 cut(s)	1222
Eam1104I	CTCTTC	1 cut(s)	951
EarI	CTCTTC	1 cut(s)	951
EciI	GGCGGA	1 cut(s)	1283
Eco130I	CCWWGG	1 cut(s)	1249
Eco32I	GATATC	1 cut(s)	1023
Eco57I	CTGAAG	2 cut(s)	12, 975
EcoRI	GAATTC	2 cut(s)	344, 670
EcoRII	CCWGG	1 cut(s)	1204
EcoRV	GATATC	1 cut(s)	1023
EcoT14I	CCWWGG	1 cut(s)	1249
EcoT22I	ATGCAT	1 cut(s)	1452
ErhI	CCWWGG	1 cut(s)	1249
FaeI	CATG	5 cut(s)	697, 1336, 1454, 1601, 1616
FaqI	GGGAC	3 cut(s)	554, 843, 1472
FatI	CATG	5 cut(s)	693, 1332, 1450, 1597, 1612
FauNDI	CATATG	2 cut(s)	269, 612
FbaI	TGATCA	1 cut(s)	547
Fnu4HI	GCNGC	6 cut(s)	21, 374, 493, 1198, 1246, 1802
FokI	GGATG	5 cut(s)	46, 658, 690, 1735, 1745
Fsp4HI	GCNGC	6 cut(s)	21, 374, 493, 1198, 1246, 1802
FspBI	CTAG	6 cut(s)	477, 489, 504, 1140, 1250, 1329
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	6 cut(s)	21, 374, 493, 1198, 1246, 1802
HaeIII	GGCC	2 cut(s)	1363, 1674
HapII	CCGG	7 cut(s)	242, 572, 675, 688, 1520, 1675, 1747
HgaI	GACGC	1 cut(s)	1212
HhaI	GCGC	1 cut(s)	308
Hin1II	CATG	5 cut(s)	697, 1336, 1454, 1601, 1616
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	1 cut(s)	1047
HindII	GTYRAC	1 cut(s)	1047
HindIII	AAGCTT	2 cut(s)	699, 1694
HinfI	GANTC	9 cut(s)	254, 286, 581, 650, 812, 890, 1057, 1152, 1772
HpaII	CCGG	7 cut(s)	242, 572, 675, 688, 1520, 1675, 1747
HphI	GGTGA	3 cut(s)	728, 1087, 1702
Hpy166II	GTNNAC	1 cut(s)	1047
Hpy188III	TCNNGA	5 cut(s)	477, 675, 848, 938, 1156
Hpy8I	GTNNAC	1 cut(s)	1047
Hpy99I	CGWCG	2 cut(s)	589, 1543
HpyAV	CCTTC	9 cut(s)	965, 988, 1034, 1075, 1258, 1449, 1500, 1504, 1712
HpyCH4III	ACNGT	2 cut(s)	819, 1543
HpyCH4IV	ACGT	1 cut(s)	1419
HpyCH4V	TGCA	9 cut(s)	23, 164, 495, 723, 822, 1373, 1450, 1789, 1804
HpyF10VI	GCNNNNNNNGC	7 cut(s)	17, 29, 471, 572, 1693, 1760, 1786
HpyF3I	CTNAG	1 cut(s)	291
HpySE526I	ACGT	1 cut(s)	1419
Hsp92II	CATG	5 cut(s)	697, 1336, 1454, 1601, 1616
HspAI	GCGC	1 cut(s)	306
Kpn2I	TCCGGA	1 cut(s)	674
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
LguI	GCTCTTC	1 cut(s)	951
LmnI	GCTCC	2 cut(s)	238, 370
Lsp1109I	GCAGC	5 cut(s)	7, 385, 479, 1184, 1788
LweI	GCATC	3 cut(s)	101, 668, 1360
MaeI	CTAG	6 cut(s)	477, 489, 504, 1140, 1250, 1329
MaeII	ACGT	1 cut(s)	1419
MaeIII	GTNAC	5 cut(s)	204, 484, 865, 1213, 1819
MalI	GATC	6 cut(s)	56, 315, 392, 549, 692, 999
MboI	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
MflI	RGATCY	1 cut(s)	997
MluI	ACGCGT	1 cut(s)	1221
MlyI	GAGTC	3 cut(s)	248, 1051, 1146
MmeI	TCCRAC	3 cut(s)	260, 1128, 1710
Mph1103I	ATGCAT	1 cut(s)	1452
MroI	TCCGGA	1 cut(s)	674
MroXI	GAANNNNTTC	1 cut(s)	263
MslI	CAYNNNNRTG	3 cut(s)	555, 1337, 1617
MspA1I	CMGCKG	2 cut(s)	376, 1163
MspI	CCGG	7 cut(s)	242, 572, 675, 688, 1520, 1675, 1747
MspR9I	CCNGG	3 cut(s)	243, 572, 1206
Mva1269I	GAATGC	3 cut(s)	308, 933, 1765
MvaI	CCWGG	1 cut(s)	1206
MvnI	CGCG	1 cut(s)	1223
MwoI	GCNNNNNNNGC	7 cut(s)	17, 29, 471, 572, 1693, 1760, 1786
NciI	CCSGG	2 cut(s)	243, 572
NdeI	CATATG	2 cut(s)	269, 612
NdeII	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
NlaIII	CATG	5 cut(s)	697, 1336, 1454, 1601, 1616
NlaIV	GGNNCC	3 cut(s)	247, 777, 999
NmeAIII	GCCGAG	1 cut(s)	274
NmuCI	GTSAC	3 cut(s)	484, 865, 1213
NsiI	ATGCAT	1 cut(s)	1452
NspV	TTCGAA	3 cut(s)	1176, 1481, 1664
PciSI	GCTCTTC	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	1 cut(s)	318
PctI	GAATGC	3 cut(s)	308, 933, 1765
PdmI	GAANNNNTTC	1 cut(s)	263
PfeI	GAWTC	6 cut(s)	286, 581, 650, 812, 890, 1772
PflMI	CCANNNNNTGG	1 cut(s)	405
PinAI	ACCGGT	1 cut(s)	1746
PkrI	GCNGC	6 cut(s)	22, 375, 494, 1199, 1247, 1803
PleI	GAGTC	3 cut(s)	248, 1051, 1146
PpsI	GAGTC	3 cut(s)	248, 1051, 1146
PshBI	ATTAAT	1 cut(s)	123
PsiI	TTATAA	1 cut(s)	1547
Psp6I	CCWGG	1 cut(s)	1204
PspGI	CCWGG	1 cut(s)	1204
PspN4I	GGNNCC	3 cut(s)	247, 777, 999
PspPI	GGNCC	1 cut(s)	1672
PsuI	RGATCY	1 cut(s)	997
PvuII	CAGCTG	1 cut(s)	376
RsaI	GTAC	2 cut(s)	386, 1346
RsaNI	GTAC	2 cut(s)	385, 1345
RseI	CAYNNNNRTG	3 cut(s)	555, 1337, 1617
SapI	GCTCTTC	1 cut(s)	951
SatI	GCNGC	6 cut(s)	21, 374, 493, 1198, 1246, 1802
Sau3AI	GATC	6 cut(s)	54, 313, 390, 547, 690, 997
Sau96I	GGNCC	1 cut(s)	1672
SchI	GAGTC	3 cut(s)	248, 1051, 1146
ScrFI	CCNGG	3 cut(s)	243, 572, 1206
SfaNI	GCATC	3 cut(s)	101, 668, 1360
SfcI	CTRYAG	1 cut(s)	136
SfuI	TTCGAA	3 cut(s)	1176, 1481, 1664
SmiMI	CAYNNNNRTG	3 cut(s)	555, 1337, 1617
SmlI	CTYRAG	1 cut(s)	848
SmoI	CTYRAG	1 cut(s)	848
SsiI	CCGC	4 cut(s)	1121, 1161, 1246, 1268
SspI	AATATT	1 cut(s)	1592
SspMI	CTAG	6 cut(s)	477, 489, 504, 1140, 1250, 1329
StyD4I	CCNGG	3 cut(s)	241, 570, 1204
StyI	CCWWGG	1 cut(s)	1249
TaaI	ACNGT	2 cut(s)	819, 1543
TaiI	ACGT	1 cut(s)	1422
TauI	GCSGC	1 cut(s)	1248
TfiI	GAWTC	6 cut(s)	286, 581, 650, 812, 890, 1772
TscAI	CASTG	1 cut(s)	822
TseFI	GTSAC	3 cut(s)	484, 865, 1213
TseI	GCWGC	5 cut(s)	20, 373, 492, 1197, 1801
Tsp45I	GTSAC	3 cut(s)	484, 865, 1213
TspGWI	ACGGA	8 cut(s)	311, 383, 567, 622, 658, 813, 884, 1508
TspRI	CASTG	1 cut(s)	822
Van91I	CCANNNNNTGG	1 cut(s)	405
VspI	ATTAAT	1 cut(s)	123
XapI	RAATTY	7 cut(s)	77, 166, 344, 670, 801, 1169, 1465
XbaI	TCTAGA	1 cut(s)	476
XmaJI	CCTAGG	1 cut(s)	1249
XmnI	GAANNNNTTC	1 cut(s)	263
XspI	CTAG	6 cut(s)	477, 489, 504, 1140, 1250, 1329
Zsp2I	ATGCAT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.