Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008792

Physical Location & Seq

Genomic Coordinates Reverse (-)

63384930 .. 63387161

Gene Structure 2232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G036580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGCCATCTCCAGTTCTTCTCCAAGTTCTGGAGACTGGTCTTTGGCTTCTTTGATATCTTGCAGAAAGTCCCACCGAACACAGAAACCCCATTCCTTCTTCTCCATTCCCAGCTGGAATGTTCGAGCTTTCAACATCATCAACTCCTCTGGCTGCCCTTCTCCAATACTTGAAGATCAAGCATCGACCAACTTGCCAGTCATTGAAGTGGACCTGAAATTTCAACAACTTAAAATCCCGGATGCCGAAAACTTAAATGAATTCCTATGTGGGCTGTTTCAAGACCCTGAGACTGAGGCAATGGGACATGAACAGTATGAGAAAGCCAAGAAGATATCAGAATTCAGACCAAACAAGTCAACATTGGAGCATGTGACAAGGTATTTGGTACGATCAAAGAAATGGGGTTCAATTATTTCAGTTTCTAATGATTTCAAGACATATGATTTGCTGCCTGATAGCTATACATGTTCTAGACTGGTCACTAGTTGCATTAGAGCTAGGAAGTTCAAGATTGTTAGCACTTTGCTTGAAGTGTTTAAGTCCAACGGCGATGTTGCTCTGCTGGCCTTTGATTCTGCTATGAGAGGCTACAATGAGCTTCACATGTATAAAAGTACCATGTCTGTGTTTGAAAAAATGATATCTACCGGAATTGGTCCGGATTCTGGGTGTTATTGTAGGATAATGGAAGCTTATTTCAAAAAGGGTGACTATAGAAAAGTTGTTGAATTGTTTCAGGAACTGAAAAGTAGGCAATTAGATTTGACACCATTGTCAACTCAGATTCTATGCGAGTCGTTAACCAAATTGGGGAAGCCTCTAGAAGCTCTTGAGATTTTTCGAAGTATGTCAAAGGAAGGCATTTCTTTAGACTCTTCAAAGATATATTCTGTTTTGATCAGTTCATTTGCGAGCATTCGAGAAGTGAAGGTAGCTGAAGAGCTGTTTGAAGAAGCAGAAACCAAGAAAATGTTGAGGAATCCGACTGTATTTTTGAGACTGATCACAATGTATGTTGAAGAAGGGTTGGTGGATAAGACTCTTGAAATAGTCAAGGCAATGAAGGGTGCAAATATCAGAGTTTCCGATAACATATGCTGCGCAGTTGTGAGTGGCTTCTCCAGGAAAAGCAGGTTTCTCACAGCAGTTAAAGTGTTTGAAGATTTGATCTCAATGGGATGTGAACCGGGACAGGTGACATATGCTTCGATTATCAATGTGTATTGTCGTCTTGGGCTTCATTCTAAGGCTGAGATGGTGTTTAGAGAGATGGAAGAAAAAGGGTTTGATAAATGTGTTGTGGCGTATTCAAGCATGGTTGTAATGTATGGGAAGACAGGAAGGCCAAGAGAGGCAATGAGGCTTGTGGCCAAGATGAAAGAAAGAGGGTGTAAGCCGAATGTGTGGATTTACAATTCTTTGATGGATATGCATGGAAGGGATAATAATATGAGGCAAGTTGCAAAGCTATGGAGCGAAATGAAGCGAAGGAAGGTAGCACCGGATAAGGTGAGCTACACAACTGTTATAGGTGCTTATAACAAGGCAGGGGACTTTGATATGTGCTTGAGATTTTACAATGAGTATAGGACTCATGGCGGTGTCTTGGACAAGGCTATGGCTGGAATGATGGTTGGTGTTTTCTCCAAGAGTGGTCGTGTTGACGAGTTGGTGAAGCTTCTGCGAGATATGAAAGCAGAAGGAACAGGGTTAGATGTGAGGCTTTATCGGTCCGCCTTGAATGCTTTGTCAGATTCTGGTCTGGAAATGCAGGTGAAATGGTTGCAAAGTAGCTTTGAGGTGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

603

Amino Acids

68.19

Weight (kDa)

8.96

Isoelectric Point (pI)

34.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	369 - 411	3.3e-06	PPR repeat family
PPR_1	PF12854	393 - 426	1.5e-08	PPR repeat
PPR_2	PF13041	397 - 430	3.3e-06	PPR repeat family
PPR	PF01535	400 - 430	3.3e-08	PPR repeat
PPR_3	PF13812	421 - 480	4e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	433 - 469	2.8e-08	PPR repeat family
PPR	PF01535	435 - 465	2.7e-06	PPR repeat
PPR_2	PF13041	467 - 514	1.4e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13770
fragaria_vesca	FvH4_4g36140
malus_domestica	MD13G1010900.v1.1 MD16G1008400.v1.1
prunus_persica	Prupe.1G342100_v2.0.a1
pyrus_communis	pycom16g00820
rosa_chinensis	RchiOBHm_Chr4g0445881
rosa_laevigata	RLG00000005705
rosa_multiflora	Rmu_co8340621.1_g000001 Rmu_sc0000961.1_g000004 Rmu_sc0000961.1_g000009
rosa_roxburghii	Rroxscaffold_5G00386320
rosa_rugosa	Rorug04G0365400
rosa_samantha	Rh4AG427200 Rh4BG437000 Rh4BG437400 Rh4BG437500 Rh4CG453700 Rh4CG453800 Rh4CG454200 Rh4DG435500
rosa_wichuraiana	Rw4G036550 Rw4G036580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1542
AarI	CACCTGC	1 cut(s)	1765
AasI	GACNNNNNNGTC	1 cut(s)	775
Acc16I	TGCGCA	1 cut(s)	1105
Acc36I	ACCTGC	2 cut(s)	1125, 1765
AccB7I	CCANNNNNTGG	1 cut(s)	29
AccIII	TCCGGA	1 cut(s)	661
AciI	CCGC	2 cut(s)	1602, 1737
AcoI	YGGCCR	2 cut(s)	3, 1371
AcsI	RAATTY	3 cut(s)	218, 260, 341
AcuI	CTGAAG	1 cut(s)	960
AfaI	GTAC	2 cut(s)	390, 619
AfiI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
AflIII	ACRYGT	2 cut(s)	467, 606
AhlI	ACTAGT	1 cut(s)	485
AjnI	CCWGG	1 cut(s)	1124
Alw26I	GTCTC	3 cut(s)	27, 284, 994
AlwNI	CAGNNNCTG	2 cut(s)	745, 1760
Aor13HI	TCCGGA	1 cut(s)	661
AoxI	GGCC	4 cut(s)	3, 567, 1346, 1371
ApeKI	GCWGC	3 cut(s)	153, 451, 1101
ApoI	RAATTY	3 cut(s)	218, 260, 341
ArsI	GACNNNNNNTTYG	8 cut(s)	367, 399, 430, 462, 979, 1011, 1192, 1224
Asp700I	GAANNNNTTC	1 cut(s)	735
AspLEI	GCGC	1 cut(s)	1106
AspS9I	GGNCC	3 cut(s)	211, 659, 1734
AsuC2I	CCSGG	2 cut(s)	239, 1191
AsuHPI	GGTGA	5 cut(s)	722, 1210, 1525, 1687, 1789
AsuII	TTCGAA	1 cut(s)	844
AvaII	GGWCC	3 cut(s)	211, 659, 1734
BalI	TGGCCA	2 cut(s)	5, 1373
BbsI	GAAGAC	1 cut(s)	1343
BbvI	GCAGC	3 cut(s)	140, 438, 1088
BccI	CCATC	5 cut(s)	14, 1252, 1267, 1420, 1627
BceAI	ACGGC	1 cut(s)	565
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	1 cut(s)	1126
BclI	TGATCA	2 cut(s)	900, 1005
BcnI	CCSGG	2 cut(s)	239, 1191
BcoDI	GTCTC	3 cut(s)	27, 284, 994
BcuI	ACTAGT	1 cut(s)	485
BfaI	CTAG	4 cut(s)	474, 486, 501, 824
BfmI	CTRYAG	1 cut(s)	715
BfuAI	ACCTGC	2 cut(s)	1125, 1765
BisI	GCNGC	3 cut(s)	154, 452, 1102
BlsI	GCNGC	3 cut(s)	155, 453, 1103
Bme1390I	CCNGG	3 cut(s)	239, 1126, 1191
Bme18I	GGWCC	3 cut(s)	211, 659, 1734
BmgT120I	GGNCC	3 cut(s)	211, 659, 1734
BmrFI	CCNGG	3 cut(s)	239, 1126, 1191
BmsI	GCATC	2 cut(s)	191, 232
BpiI	GAAGAC	1 cut(s)	1343
BpmI	CTGGAG	2 cut(s)	51, 1108
Bpu14I	TTCGAA	1 cut(s)	844
BpuEI	CTTGAG	2 cut(s)	854, 1591
BpuMI	CCSGG	2 cut(s)	239, 1191
BsaWI	WCCGGW	3 cut(s)	650, 661, 1504
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 668, 813
Bse1I	ACTGG	4 cut(s)	12, 41, 197, 483
Bse3DI	GCAATG	3 cut(s)	306, 1068, 1365
BseAI	TCCGGA	1 cut(s)	661
BseBI	CCWGG	1 cut(s)	1126
BseGI	GGATG	2 cut(s)	247, 1187
BseLI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
BseMI	GCAATG	3 cut(s)	306, 1068, 1365
BseMII	CTCAG	4 cut(s)	279, 285, 797, 1245
BseNI	ACTGG	4 cut(s)	12, 41, 197, 483
BseRI	GAGGAG	1 cut(s)	136
BseXI	GCAGC	3 cut(s)	140, 438, 1088
BseYI	CCCAGC	1 cut(s)	110
BshFI	GGCC	4 cut(s)	5, 569, 1348, 1373
BsiSI	CCGG	5 cut(s)	239, 651, 662, 1190, 1505
BslFI	GGGAC	4 cut(s)	55, 318, 1206, 1568
BslI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
BsmAI	GTCTC	3 cut(s)	27, 284, 994
BsmFI	GGGAC	4 cut(s)	55, 318, 1206, 1568
BsmI	GAATGC	2 cut(s)	918, 1750
BsnI	GGCC	4 cut(s)	5, 569, 1348, 1373
Bsp119I	TTCGAA	1 cut(s)	844
Bsp13I	TCCGGA	1 cut(s)	661
Bsp143I	GATC	5 cut(s)	175, 392, 900, 1005, 1170
BspACI	CCGC	2 cut(s)	1602, 1737
BspANI	GGCC	4 cut(s)	5, 569, 1348, 1373
BspCNI	CTCAG	4 cut(s)	280, 286, 796, 1246
BspEI	TCCGGA	1 cut(s)	661
BspMI	ACCTGC	2 cut(s)	1125, 1765
BspQI	GCTCTTC	1 cut(s)	936
BspT104I	TTCGAA	1 cut(s)	844
BsrDI	GCAATG	3 cut(s)	306, 1068, 1365
BsrI	ACTGG	4 cut(s)	12, 41, 197, 483
BssMI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
Bst2UI	CCWGG	1 cut(s)	1126
Bst4CI	ACNGT	3 cut(s)	315, 991, 1528
Bst6I	CTCTTC	2 cut(s)	883, 936
BstBI	TTCGAA	1 cut(s)	844
BstC8I	GCNNGC	2 cut(s)	567, 916
BstDEI	CTNAG	5 cut(s)	288, 294, 783, 1248, 1254
BstF5I	GGATG	2 cut(s)	247, 1187
BstHHI	GCGC	1 cut(s)	1106
BstKTI	GATC	5 cut(s)	178, 395, 903, 1008, 1173
BstMAI	GTCTC	3 cut(s)	27, 284, 994
BstMBI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
BstMWI	GCNNNNNNNGC	2 cut(s)	566, 1745
BstNI	CCWGG	1 cut(s)	1126
BstNSI	RCATGY	3 cut(s)	374, 471, 610
BstSCI	CCNGG	3 cut(s)	237, 1124, 1189
BstSFI	CTRYAG	1 cut(s)	715
BstV1I	GCAGC	3 cut(s)	140, 438, 1088
BstV2I	GAAGAC	1 cut(s)	1343
BsuRI	GGCC	4 cut(s)	5, 569, 1348, 1373
BtgZI	GCGATG	1 cut(s)	567
BtsCI	GGATG	2 cut(s)	247, 1187
BveI	ACCTGC	2 cut(s)	1125, 1765
Cac8I	GCNNGC	2 cut(s)	567, 916
CaiI	CAGNNNCTG	2 cut(s)	745, 1760
CfoI	GCGC	1 cut(s)	1106
Cfr13I	GGNCC	3 cut(s)	211, 659, 1734
CpoI	CGGWCCG	1 cut(s)	1734
Csp6I	GTAC	2 cut(s)	389, 618
CspI	CGGWCCG	1 cut(s)	1734
CviAII	CATG	8 cut(s)	308, 371, 468, 607, 622, 1318, 1436, 1598
CviQI	GTAC	2 cut(s)	389, 618
DdeI	CTNAG	5 cut(s)	288, 294, 783, 1248, 1254
DpnI	GATC	5 cut(s)	177, 394, 902, 1007, 1172
DpnII	GATC	5 cut(s)	175, 392, 900, 1005, 1170
DrdI	GACNNNNNNGTC	1 cut(s)	775
DseDI	GACNNNNNNGTC	1 cut(s)	775
EaeI	YGGCCR	2 cut(s)	3, 1371
Eam1104I	CTCTTC	2 cut(s)	883, 936
EarI	CTCTTC	2 cut(s)	883, 936
EciI	GGCGGA	1 cut(s)	1726
Eco32I	GATATC	3 cut(s)	57, 336, 645
Eco47I	GGWCC	3 cut(s)	211, 659, 1734
Eco57I	CTGAAG	1 cut(s)	960
EcoRI	GAATTC	2 cut(s)	260, 341
EcoRII	CCWGG	1 cut(s)	1124
EcoRV	GATATC	3 cut(s)	57, 336, 645
EcoT22I	ATGCAT	1 cut(s)	1437
FaeI	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
FaqI	GGGAC	4 cut(s)	55, 318, 1206, 1568
FatI	CATG	8 cut(s)	307, 370, 467, 606, 621, 1317, 1435, 1597
FauNDI	CATATG	3 cut(s)	442, 1097, 1204
FbaI	TGATCA	2 cut(s)	900, 1005
Fnu4HI	GCNGC	3 cut(s)	154, 452, 1102
FokI	GGATG	2 cut(s)	254, 1194
Fsp4HI	GCNGC	3 cut(s)	154, 452, 1102
FspBI	CTAG	4 cut(s)	474, 486, 501, 824
FspI	TGCGCA	1 cut(s)	1105
GlaI	GCGC	1 cut(s)	1105
GluI	GCNGC	3 cut(s)	154, 452, 1102
GsaI	CCCAGC	1 cut(s)	114
GsuI	CTGGAG	2 cut(s)	51, 1108
HaeIII	GGCC	4 cut(s)	5, 569, 1348, 1373
HapII	CCGG	5 cut(s)	239, 651, 662, 1190, 1505
HhaI	GCGC	1 cut(s)	1106
Hin1II	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
Hin6I	GCGC	1 cut(s)	1104
HinP1I	GCGC	1 cut(s)	1104
HincII	GTYRAC	4 cut(s)	360, 780, 804, 1666
HindII	GTYRAC	4 cut(s)	360, 780, 804, 1666
HindIII	AAGCTT	2 cut(s)	693, 1679
HinfI	GANTC	9 cut(s)	575, 665, 787, 797, 875, 982, 1042, 1594, 1757
HpaI	GTTAAC	1 cut(s)	804
HpaII	CCGG	5 cut(s)	239, 651, 662, 1190, 1505
HphI	GGTGA	5 cut(s)	722, 1210, 1525, 1687, 1789
Hpy166II	GTNNAC	6 cut(s)	211, 360, 780, 804, 1187, 1666
Hpy188I	TCNGA	7 cut(s)	340, 347, 786, 987, 1082, 1090, 1756
Hpy8I	GTNNAC	6 cut(s)	211, 360, 780, 804, 1187, 1666
HpyCH4III	ACNGT	3 cut(s)	315, 991, 1528
HpyCH4V	TGCA	7 cut(s)	63, 492, 1073, 1435, 1466, 1774, 1789
HpyF10VI	GCNNNNNNNGC	2 cut(s)	566, 1745
HpyF3I	CTNAG	5 cut(s)	288, 294, 783, 1248, 1254
Hsp92II	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
HspAI	GCGC	1 cut(s)	1104
Kpn2I	TCCGGA	1 cut(s)	661
Ksp22I	TGATCA	2 cut(s)	900, 1005
KspAI	GTTAAC	1 cut(s)	804
Kzo9I	GATC	5 cut(s)	175, 392, 900, 1005, 1170
LguI	GCTCTTC	1 cut(s)	936
LmnI	GCTCC	2 cut(s)	367, 1476
Lsp1109I	GCAGC	3 cut(s)	140, 438, 1088
LweI	GCATC	2 cut(s)	191, 232
MaeI	CTAG	4 cut(s)	474, 486, 501, 824
MaeIII	GTNAC	5 cut(s)	373, 481, 710, 1198, 1804
MalI	GATC	5 cut(s)	177, 394, 902, 1007, 1172
MboI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
MlsI	TGGCCA	2 cut(s)	5, 1373
MluCI	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
MluNI	TGGCCA	2 cut(s)	5, 1373
MlyI	GAGTC	4 cut(s)	806, 869, 1036, 1588
MmeI	TCCRAC	2 cut(s)	570, 1010
Mox20I	TGGCCA	2 cut(s)	5, 1373
Mph1103I	ATGCAT	1 cut(s)	1437
MroI	TCCGGA	1 cut(s)	661
MroXI	GAANNNNTTC	1 cut(s)	735
MscI	TGGCCA	2 cut(s)	5, 1373
MseI	TTAA	5 cut(s)	231, 254, 540, 803, 1152
MslI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
Msp20I	TGGCCA	2 cut(s)	5, 1373
MspA1I	CMGCKG	1 cut(s)	114
MspI	CCGG	5 cut(s)	239, 651, 662, 1190, 1505
MspR9I	CCNGG	3 cut(s)	239, 1126, 1191
Mva1269I	GAATGC	2 cut(s)	918, 1750
MvaI	CCWGG	1 cut(s)	1126
MwoI	GCNNNNNNNGC	2 cut(s)	566, 1745
NciI	CCSGG	2 cut(s)	239, 1191
NdeI	CATATG	3 cut(s)	442, 1097, 1204
NdeII	GATC	5 cut(s)	175, 392, 900, 1005, 1170
NlaIII	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
NmuCI	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
NsbI	TGCGCA	1 cut(s)	1105
NsiI	ATGCAT	1 cut(s)	1437
NspI	RCATGY	3 cut(s)	374, 471, 610
NspV	TTCGAA	1 cut(s)	844
PaqCI	CACCTGC	1 cut(s)	1765
PciI	ACATGT	2 cut(s)	467, 606
PciSI	GCTCTTC	1 cut(s)	936
PctI	GAATGC	2 cut(s)	918, 1750
PdmI	GAANNNNTTC	1 cut(s)	735
PfeI	GAWTC	5 cut(s)	575, 665, 787, 982, 1757
PflMI	CCANNNNNTGG	1 cut(s)	29
PfoI	TCCNGGA	2 cut(s)	237, 1124
PkrI	GCNGC	3 cut(s)	155, 453, 1103
PleI	GAGTC	4 cut(s)	805, 869, 1036, 1588
PpsI	GAGTC	4 cut(s)	805, 869, 1036, 1588
PscI	ACATGT	2 cut(s)	467, 606
PsiI	TTATAA	1 cut(s)	1542
Psp6I	CCWGG	1 cut(s)	1124
PspFI	CCCAGC	1 cut(s)	110
PspGI	CCWGG	1 cut(s)	1124
PspPI	GGNCC	3 cut(s)	211, 659, 1734
PstNI	CAGNNNCTG	2 cut(s)	745, 1760
PvuII	CAGCTG	1 cut(s)	114
RsaI	GTAC	2 cut(s)	390, 619
RsaNI	GTAC	2 cut(s)	389, 618
RseI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
Rsr2I	CGGWCCG	1 cut(s)	1734
RsrII	CGGWCCG	1 cut(s)	1734
SapI	GCTCTTC	1 cut(s)	936
SaqAI	TTAA	5 cut(s)	231, 254, 540, 803, 1152
SatI	GCNGC	3 cut(s)	154, 452, 1102
Sau3AI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
Sau96I	GGNCC	3 cut(s)	211, 659, 1734
SchI	GAGTC	4 cut(s)	806, 869, 1036, 1588
ScrFI	CCNGG	3 cut(s)	239, 1126, 1191
SfaNI	GCATC	2 cut(s)	191, 232
SfcI	CTRYAG	1 cut(s)	715
SfuI	TTCGAA	1 cut(s)	844
SinI	GGWCC	3 cut(s)	211, 659, 1734
SmiMI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
SmlI	CTYRAG	2 cut(s)	833, 1570
SmoI	CTYRAG	2 cut(s)	833, 1570
SpeI	ACTAGT	1 cut(s)	485
Sse9I	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
SsiI	CCGC	2 cut(s)	1602, 1737
SspMI	CTAG	4 cut(s)	474, 486, 501, 824
StyD4I	CCNGG	3 cut(s)	237, 1124, 1189
TaaI	ACNGT	3 cut(s)	315, 991, 1528
TaqI	TCGA	5 cut(s)	124, 185, 844, 922, 1211
TaqII	GACCGA	1 cut(s)	1722
TasI	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
TfiI	GAWTC	5 cut(s)	575, 665, 787, 982, 1757
Tru1I	TTAA	5 cut(s)	231, 254, 540, 803, 1152
Tru9I	TTAA	5 cut(s)	231, 254, 540, 803, 1152
TseFI	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
TseI	GCWGC	3 cut(s)	153, 451, 1101
Tsp45I	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
TspDTI	ATGAA	8 cut(s)	273, 324, 897, 1079, 1232, 1394, 1499, 1709
Van91I	CCANNNNNTGG	1 cut(s)	29
VpaK11BI	GGWCC	3 cut(s)	211, 659, 1734
XapI	RAATTY	3 cut(s)	218, 260, 341
XbaI	TCTAGA	2 cut(s)	473, 823
XceI	RCATGY	3 cut(s)	374, 471, 610
XmnI	GAANNNNTTC	1 cut(s)	735
XspI	CTAG	4 cut(s)	474, 486, 501, 824
Zsp2I	ATGCAT	1 cut(s)	1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.