Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008792

Physical Location & Seq

Genomic Coordinates Reverse (-)

65207563 .. 65209665

Gene Structure 2103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00386320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGCCATCTCCAGTTCTTCTCCAAGTTCTGGAGACTGGTCTTTGGCTTCTTTGATATCTTGCAGAAAATCCCACAGAACACAGAAACCCCATTCCTTCTTCTCCATTCCCACCTGGAATGTTCGAGCTTTCAACATCATCAACTCCTCTGGCTGCCCTTCTCCAATACTTGAAGATCAAGCATCGGCCAACTTGCCAGTCATTGAAGTGGACCTGAAATTTCAAGAACTTAAAATCCCGGATGACGAAAACTTAAATGAATTCCTATGTGGGCTGTTTCAAGACCCTGAGACCGAAGCAATGGGACATGAACAGTATGAGAAAGCCAAGAAGATATCAGAATTCAGACCAAACAAATCAACATTGGAGCATGTGACGAGGTATTTGGTACGATCAAAGAAATGGGGTTCAATTATTTCAGTTTCTAATGATTTCAAGACATATGATTTGCTGCCTGATAGCTATACATGTTCTAGACTGGTCACTAGTTGCATTAGAGCTAGGCAGTTCAAGATTGTAAGCACTTTGCTTGAAGTGTTTAAGTCCAATGGCGATGTTGCTCTGCTGGCCTTTGATTCTGCTATGAGAGGCTACAATGAGCTTCACATGTATAAAAGTACCATGTCTGTGTTTGAAAAAATGATATCTGCTGGAATTGGTCCGGATTCTGGGTGTTATTGTAGGATAATGGAAGCTTATTTCAAAAAGGGTGACTATAGAAAAGTTGTTGAATTGTTTCAGGAACTGAAAAGTAGGCAATTAGATTTGACACCATTGTCAACTCAGATTCTATGCGAGTCGTTAACCAAATTGGGGAAGCCTCTAGAAGCTCTTGAGATTTTTCGAAGTATGTCAAAGGAAGGCATTTCTTTAGACTCTTCAAAGATATATTTTGTTTTGATCAGTTCATTTGCAAGCATTCGAGAAGTGAAGGTAGCTGAAGAGCTGTTTGAAGAAGCAGAAACCAAGAAAATGTTGAGGAATCCGACTGTATTTTTGAGACTGATCACAATGTATGTTGAAGAAGGGTTGGTGGATAAGACTCTTGAAATAGTCAAGGCAATGAAGGGTGCAAATATGAGAGTTTCCGATAACATATGCTGCGCAGTTGTGAGTGGCTTCTCCAGGAAAAGCAGGTTTCTCACAGCAGTTAAAGTGTTTGAAGATTTGATCTCAATGGGATGTGAACCGGGACAGGTGACATACGCTTCGATTATCAATGTGTATTGTCGTCTTGGGCTTCATTCTAAGGCTGAGATGGTGTTTAGAGAGATGGAAGAAAAAGGGTTTGATAAATGTGTTGTGGCGTATTCAAGCATGGTTGTAATGTATGGGAAGACAGGAAGGCCAAGAGAGGCAATGAGGCTTGTGGCCAAGATGAAAGAAAGAGGCTGTAAGCCGAATGTGTGGATTTACAATTCTTTGATGGATATGCATGGAAGGGATAATAATATGAGGCAAGTTGCAAAGCTATGGAGCGAAATGAAGCGAAGGAAGGTAGCACCAGATAAGGTGAGCTACACAACTGTTATAGGTGCTTATAACAAGGCAGGGGACTTTGATATGTGCTTGAGATTTTACAATGAGTATAGGACTCATGGCGGTGTTTTGGACAAGGCTATGGCTGGAATGATGGTTGGTGTTTTCTCCAAGAGTGGTCGTGTTGACGAGTTGGTGAAGCTTCTGCGAGATATGAAAGCAGAAGGAACAGGGTTAGATGTAAGGCTTTATCGGTCCGCCTTGAATGCTTTGGCAGATTCTGGTCTGGAAATGCAGGTGAAATGGTTGCAAAGTAGCTTTGAGGTGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

603

Amino Acids

68.25

Weight (kDa)

8.81

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	369 - 411	3.3e-06	PPR repeat family
PPR_1	PF12854	393 - 426	1.5e-08	PPR repeat
PPR_2	PF13041	397 - 430	3.3e-06	PPR repeat family
PPR	PF01535	400 - 430	3.3e-08	PPR repeat
PPR_3	PF13812	421 - 480	4e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	433 - 469	2.8e-08	PPR repeat family
PPR	PF01535	435 - 465	2.7e-06	PPR repeat
PPR_2	PF13041	467 - 514	1.4e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13770
fragaria_vesca	FvH4_4g36140
malus_domestica	MD13G1010900.v1.1 MD16G1008400.v1.1
prunus_persica	Prupe.1G342100_v2.0.a1
pyrus_communis	pycom16g00820
rosa_chinensis	RchiOBHm_Chr4g0445881
rosa_laevigata	RLG00000005705
rosa_multiflora	Rmu_co8340621.1_g000001 Rmu_sc0000961.1_g000004 Rmu_sc0000961.1_g000009
rosa_roxburghii	Rroxscaffold_5G00386320
rosa_rugosa	Rorug04G0365400
rosa_samantha	Rh4AG427200 Rh4BG437000 Rh4BG437400 Rh4BG437500 Rh4CG453700 Rh4CG453800 Rh4CG454200 Rh4DG435500
rosa_wichuraiana	Rw4G036550 Rw4G036580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1542
AarI	CACCTGC	1 cut(s)	1765
AasI	GACNNNNNNGTC	1 cut(s)	775
Acc16I	TGCGCA	1 cut(s)	1105
Acc36I	ACCTGC	2 cut(s)	1125, 1765
AccB7I	CCANNNNNTGG	1 cut(s)	29
AccIII	TCCGGA	1 cut(s)	661
AciI	CCGC	2 cut(s)	1602, 1737
AcoI	YGGCCR	3 cut(s)	3, 186, 1371
AcsI	RAATTY	3 cut(s)	218, 260, 341
AcuI	CTGAAG	1 cut(s)	960
AfaI	GTAC	2 cut(s)	390, 619
AfiI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
AflIII	ACRYGT	2 cut(s)	467, 606
AhlI	ACTAGT	1 cut(s)	485
AjnI	CCWGG	2 cut(s)	113, 1124
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
Alw26I	GTCTC	3 cut(s)	27, 284, 994
AlwNI	CAGNNNCTG	2 cut(s)	745, 1760
Aor13HI	TCCGGA	1 cut(s)	661
AoxI	GGCC	5 cut(s)	3, 186, 567, 1346, 1371
ApeKI	GCWGC	3 cut(s)	153, 451, 1101
ApoI	RAATTY	3 cut(s)	218, 260, 341
ArsI	GACNNNNNNTTYG	8 cut(s)	367, 399, 430, 462, 979, 1011, 1192, 1224
Asp700I	GAANNNNTTC	1 cut(s)	735
AspLEI	GCGC	1 cut(s)	1106
AspS9I	GGNCC	3 cut(s)	211, 659, 1734
AsuC2I	CCSGG	2 cut(s)	239, 1191
AsuHPI	GGTGA	5 cut(s)	722, 1210, 1525, 1687, 1789
AsuII	TTCGAA	1 cut(s)	844
AvaII	GGWCC	3 cut(s)	211, 659, 1734
BalI	TGGCCA	2 cut(s)	5, 1373
BbsI	GAAGAC	1 cut(s)	1343
BbvI	GCAGC	3 cut(s)	140, 438, 1088
BccI	CCATC	5 cut(s)	14, 1252, 1267, 1420, 1627
BciT130I	CCWGG	2 cut(s)	115, 1126
BclI	TGATCA	2 cut(s)	900, 1005
BcnI	CCSGG	2 cut(s)	239, 1191
BcoDI	GTCTC	3 cut(s)	27, 284, 994
BcuI	ACTAGT	1 cut(s)	485
BfaI	CTAG	4 cut(s)	474, 486, 501, 824
BfmI	CTRYAG	1 cut(s)	715
BfuAI	ACCTGC	2 cut(s)	1125, 1765
BisI	GCNGC	3 cut(s)	154, 452, 1102
BlsI	GCNGC	3 cut(s)	155, 453, 1103
Bme1390I	CCNGG	4 cut(s)	115, 239, 1126, 1191
Bme18I	GGWCC	3 cut(s)	211, 659, 1734
BmgT120I	GGNCC	3 cut(s)	211, 659, 1734
BmrFI	CCNGG	4 cut(s)	115, 239, 1126, 1191
BmsI	GCATC	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	1343
BpmI	CTGGAG	2 cut(s)	51, 1108
Bpu14I	TTCGAA	1 cut(s)	844
BpuEI	CTTGAG	2 cut(s)	854, 1591
BpuMI	CCSGG	2 cut(s)	239, 1191
BsaI	GGTCTC	1 cut(s)	284
BsaWI	WCCGGW	1 cut(s)	661
Bsc4I	CCNNNNNNNGG	3 cut(s)	29, 668, 813
Bse1I	ACTGG	4 cut(s)	12, 41, 197, 483
Bse3DI	GCAATG	3 cut(s)	306, 1068, 1365
BseAI	TCCGGA	1 cut(s)	661
BseBI	CCWGG	2 cut(s)	115, 1126
BseGI	GGATG	2 cut(s)	247, 1187
BseLI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
BseMI	GCAATG	3 cut(s)	306, 1068, 1365
BseMII	CTCAG	3 cut(s)	279, 797, 1245
BseNI	ACTGG	4 cut(s)	12, 41, 197, 483
BseRI	GAGGAG	1 cut(s)	136
BseXI	GCAGC	3 cut(s)	140, 438, 1088
BshFI	GGCC	5 cut(s)	5, 188, 569, 1348, 1373
BsiSI	CCGG	3 cut(s)	239, 662, 1190
BslFI	GGGAC	3 cut(s)	318, 1206, 1568
BslI	CCNNNNNNNGG	3 cut(s)	29, 668, 813
BsmAI	GTCTC	3 cut(s)	27, 284, 994
BsmFI	GGGAC	3 cut(s)	318, 1206, 1568
BsmI	GAATGC	2 cut(s)	918, 1750
BsnI	GGCC	5 cut(s)	5, 188, 569, 1348, 1373
Bso31I	GGTCTC	1 cut(s)	284
Bsp119I	TTCGAA	1 cut(s)	844
Bsp13I	TCCGGA	1 cut(s)	661
Bsp143I	GATC	5 cut(s)	175, 392, 900, 1005, 1170
BspACI	CCGC	2 cut(s)	1602, 1737
BspANI	GGCC	5 cut(s)	5, 188, 569, 1348, 1373
BspCNI	CTCAG	3 cut(s)	280, 796, 1246
BspEI	TCCGGA	1 cut(s)	661
BspMI	ACCTGC	2 cut(s)	1125, 1765
BspQI	GCTCTTC	1 cut(s)	936
BspT104I	TTCGAA	1 cut(s)	844
BspTNI	GGTCTC	1 cut(s)	284
BsrDI	GCAATG	3 cut(s)	306, 1068, 1365
BsrI	ACTGG	4 cut(s)	12, 41, 197, 483
BssMI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
Bst2UI	CCWGG	2 cut(s)	115, 1126
Bst4CI	ACNGT	3 cut(s)	315, 991, 1528
Bst6I	CTCTTC	2 cut(s)	883, 936
BstBI	TTCGAA	1 cut(s)	844
BstC8I	GCNNGC	2 cut(s)	567, 916
BstDEI	CTNAG	4 cut(s)	288, 783, 1248, 1254
BstF5I	GGATG	2 cut(s)	247, 1187
BstHHI	GCGC	1 cut(s)	1106
BstKTI	GATC	5 cut(s)	178, 395, 903, 1008, 1173
BstMAI	GTCTC	3 cut(s)	27, 284, 994
BstMBI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
BstMWI	GCNNNNNNNGC	2 cut(s)	566, 1745
BstNI	CCWGG	2 cut(s)	115, 1126
BstNSI	RCATGY	3 cut(s)	374, 471, 610
BstSCI	CCNGG	4 cut(s)	113, 237, 1124, 1189
BstSFI	CTRYAG	1 cut(s)	715
BstV1I	GCAGC	3 cut(s)	140, 438, 1088
BstV2I	GAAGAC	1 cut(s)	1343
BsuRI	GGCC	5 cut(s)	5, 188, 569, 1348, 1373
BtgZI	GCGATG	1 cut(s)	567
BtsCI	GGATG	2 cut(s)	247, 1187
BveI	ACCTGC	2 cut(s)	1125, 1765
Cac8I	GCNNGC	2 cut(s)	567, 916
CaiI	CAGNNNCTG	2 cut(s)	745, 1760
CfoI	GCGC	1 cut(s)	1106
Cfr13I	GGNCC	3 cut(s)	211, 659, 1734
CpoI	CGGWCCG	1 cut(s)	1734
Csp6I	GTAC	2 cut(s)	389, 618
CspI	CGGWCCG	1 cut(s)	1734
CviAII	CATG	8 cut(s)	308, 371, 468, 607, 622, 1318, 1436, 1598
CviQI	GTAC	2 cut(s)	389, 618
DdeI	CTNAG	4 cut(s)	288, 783, 1248, 1254
DpnI	GATC	5 cut(s)	177, 394, 902, 1007, 1172
DpnII	GATC	5 cut(s)	175, 392, 900, 1005, 1170
DrdI	GACNNNNNNGTC	1 cut(s)	775
DseDI	GACNNNNNNGTC	1 cut(s)	775
EaeI	YGGCCR	3 cut(s)	3, 186, 1371
Eam1104I	CTCTTC	2 cut(s)	883, 936
EarI	CTCTTC	2 cut(s)	883, 936
EciI	GGCGGA	1 cut(s)	1726
Eco31I	GGTCTC	1 cut(s)	284
Eco32I	GATATC	3 cut(s)	57, 336, 645
Eco47I	GGWCC	3 cut(s)	211, 659, 1734
Eco57I	CTGAAG	1 cut(s)	960
EcoRI	GAATTC	2 cut(s)	260, 341
EcoRII	CCWGG	2 cut(s)	113, 1124
EcoRV	GATATC	3 cut(s)	57, 336, 645
EcoT22I	ATGCAT	1 cut(s)	1437
FaeI	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
FaqI	GGGAC	3 cut(s)	318, 1206, 1568
FatI	CATG	8 cut(s)	307, 370, 467, 606, 621, 1317, 1435, 1597
FauNDI	CATATG	2 cut(s)	442, 1097
FbaI	TGATCA	2 cut(s)	900, 1005
Fnu4HI	GCNGC	3 cut(s)	154, 452, 1102
FokI	GGATG	2 cut(s)	254, 1194
Fsp4HI	GCNGC	3 cut(s)	154, 452, 1102
FspBI	CTAG	4 cut(s)	474, 486, 501, 824
FspI	TGCGCA	1 cut(s)	1105
GlaI	GCGC	1 cut(s)	1105
GluI	GCNGC	3 cut(s)	154, 452, 1102
GsuI	CTGGAG	2 cut(s)	51, 1108
HaeIII	GGCC	5 cut(s)	5, 188, 569, 1348, 1373
HapII	CCGG	3 cut(s)	239, 662, 1190
HhaI	GCGC	1 cut(s)	1106
Hin1II	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
Hin6I	GCGC	1 cut(s)	1104
HinP1I	GCGC	1 cut(s)	1104
HincII	GTYRAC	3 cut(s)	780, 804, 1666
HindII	GTYRAC	3 cut(s)	780, 804, 1666
HindIII	AAGCTT	2 cut(s)	693, 1679
HinfI	GANTC	9 cut(s)	575, 665, 787, 797, 875, 982, 1042, 1594, 1757
HpaI	GTTAAC	1 cut(s)	804
HpaII	CCGG	3 cut(s)	239, 662, 1190
HphI	GGTGA	5 cut(s)	722, 1210, 1525, 1687, 1789
Hpy166II	GTNNAC	5 cut(s)	211, 780, 804, 1187, 1666
Hpy188I	TCNGA	5 cut(s)	340, 347, 786, 987, 1090
Hpy8I	GTNNAC	5 cut(s)	211, 780, 804, 1187, 1666
HpyCH4III	ACNGT	3 cut(s)	315, 991, 1528
HpyCH4V	TGCA	8 cut(s)	63, 492, 914, 1073, 1435, 1466, 1774, 1789
HpyF10VI	GCNNNNNNNGC	2 cut(s)	566, 1745
HpyF3I	CTNAG	4 cut(s)	288, 783, 1248, 1254
Hsp92II	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
HspAI	GCGC	1 cut(s)	1104
Kpn2I	TCCGGA	1 cut(s)	661
Ksp22I	TGATCA	2 cut(s)	900, 1005
KspAI	GTTAAC	1 cut(s)	804
Kzo9I	GATC	5 cut(s)	175, 392, 900, 1005, 1170
LguI	GCTCTTC	1 cut(s)	936
LmnI	GCTCC	2 cut(s)	367, 1476
Lsp1109I	GCAGC	3 cut(s)	140, 438, 1088
LweI	GCATC	1 cut(s)	191
MaeI	CTAG	4 cut(s)	474, 486, 501, 824
MaeIII	GTNAC	5 cut(s)	373, 481, 710, 1198, 1804
MalI	GATC	5 cut(s)	177, 394, 902, 1007, 1172
MboI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
MlsI	TGGCCA	2 cut(s)	5, 1373
MluCI	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
MluNI	TGGCCA	2 cut(s)	5, 1373
MlyI	GAGTC	4 cut(s)	806, 869, 1036, 1588
MmeI	TCCRAC	1 cut(s)	1010
Mox20I	TGGCCA	2 cut(s)	5, 1373
Mph1103I	ATGCAT	1 cut(s)	1437
MroI	TCCGGA	1 cut(s)	661
MroXI	GAANNNNTTC	1 cut(s)	735
MscI	TGGCCA	2 cut(s)	5, 1373
MseI	TTAA	5 cut(s)	231, 254, 540, 803, 1152
MslI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
Msp20I	TGGCCA	2 cut(s)	5, 1373
MspI	CCGG	3 cut(s)	239, 662, 1190
MspR9I	CCNGG	4 cut(s)	115, 239, 1126, 1191
Mva1269I	GAATGC	2 cut(s)	918, 1750
MvaI	CCWGG	2 cut(s)	115, 1126
MwoI	GCNNNNNNNGC	2 cut(s)	566, 1745
NciI	CCSGG	2 cut(s)	239, 1191
NdeI	CATATG	2 cut(s)	442, 1097
NdeII	GATC	5 cut(s)	175, 392, 900, 1005, 1170
NlaIII	CATG	8 cut(s)	311, 374, 471, 610, 625, 1321, 1439, 1601
NmuCI	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
NsbI	TGCGCA	1 cut(s)	1105
NsiI	ATGCAT	1 cut(s)	1437
NspI	RCATGY	3 cut(s)	374, 471, 610
NspV	TTCGAA	1 cut(s)	844
PaqCI	CACCTGC	1 cut(s)	1765
PciI	ACATGT	2 cut(s)	467, 606
PciSI	GCTCTTC	1 cut(s)	936
PctI	GAATGC	2 cut(s)	918, 1750
PdmI	GAANNNNTTC	1 cut(s)	735
PfeI	GAWTC	5 cut(s)	575, 665, 787, 982, 1757
PflMI	CCANNNNNTGG	1 cut(s)	29
PfoI	TCCNGGA	2 cut(s)	237, 1124
PkrI	GCNGC	3 cut(s)	155, 453, 1103
PleI	GAGTC	4 cut(s)	805, 869, 1036, 1588
PpsI	GAGTC	4 cut(s)	805, 869, 1036, 1588
PscI	ACATGT	2 cut(s)	467, 606
PsiI	TTATAA	1 cut(s)	1542
Psp6I	CCWGG	2 cut(s)	113, 1124
PspGI	CCWGG	2 cut(s)	113, 1124
PspPI	GGNCC	3 cut(s)	211, 659, 1734
PstNI	CAGNNNCTG	2 cut(s)	745, 1760
RsaI	GTAC	2 cut(s)	390, 619
RsaNI	GTAC	2 cut(s)	389, 618
RseI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
Rsr2I	CGGWCCG	1 cut(s)	1734
RsrII	CGGWCCG	1 cut(s)	1734
SapI	GCTCTTC	1 cut(s)	936
SaqAI	TTAA	5 cut(s)	231, 254, 540, 803, 1152
SatI	GCNGC	3 cut(s)	154, 452, 1102
Sau3AI	GATC	5 cut(s)	175, 392, 900, 1005, 1170
Sau96I	GGNCC	3 cut(s)	211, 659, 1734
SchI	GAGTC	4 cut(s)	806, 869, 1036, 1588
ScrFI	CCNGG	4 cut(s)	115, 239, 1126, 1191
SfaNI	GCATC	1 cut(s)	191
SfcI	CTRYAG	1 cut(s)	715
SfuI	TTCGAA	1 cut(s)	844
SinI	GGWCC	3 cut(s)	211, 659, 1734
SmiMI	CAYNNNNRTG	3 cut(s)	206, 626, 1602
SmlI	CTYRAG	2 cut(s)	833, 1570
SmoI	CTYRAG	2 cut(s)	833, 1570
SpeI	ACTAGT	1 cut(s)	485
Sse9I	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
SsiI	CCGC	2 cut(s)	1602, 1737
SspMI	CTAG	4 cut(s)	474, 486, 501, 824
StyD4I	CCNGG	4 cut(s)	113, 237, 1124, 1189
TaaI	ACNGT	3 cut(s)	315, 991, 1528
TaqI	TCGA	4 cut(s)	124, 844, 922, 1211
TaqII	GACCGA	2 cut(s)	308, 1722
TasI	AATT	9 cut(s)	218, 260, 341, 411, 654, 731, 758, 809, 1417
TfiI	GAWTC	5 cut(s)	575, 665, 787, 982, 1757
Tru1I	TTAA	5 cut(s)	231, 254, 540, 803, 1152
Tru9I	TTAA	5 cut(s)	231, 254, 540, 803, 1152
TseFI	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
TseI	GCWGC	3 cut(s)	153, 451, 1101
Tsp45I	GTSAC	5 cut(s)	373, 481, 710, 1198, 1804
TspDTI	ATGAA	8 cut(s)	273, 324, 897, 1079, 1232, 1394, 1499, 1709
Van91I	CCANNNNNTGG	1 cut(s)	29
VpaK11BI	GGWCC	3 cut(s)	211, 659, 1734
XapI	RAATTY	3 cut(s)	218, 260, 341
XbaI	TCTAGA	2 cut(s)	473, 823
XceI	RCATGY	3 cut(s)	374, 471, 610
XmnI	GAANNNNTTC	1 cut(s)	735
XspI	CTAG	4 cut(s)	474, 486, 501, 824
Zsp2I	ATGCAT	1 cut(s)	1437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.