Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005085

Physical Location & Seq

Genomic Coordinates Forward (+)

2011955 .. 2016024

Gene Structure 4070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1028100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGAGCGCTTGCCGGTTTCCTCCACCGCCTCTCTCCGCTTCTTCTTCTTCTTTCTGGGTTCTACTAGCTGCGTGTCGGGTCTGACTCGGAATGGACTCGGACCCACCAGAGACCTTCTCAAGTTTAGTCTAGTGGATGAAAGTCCGGGGTCGTGGAAAAATGGGATCTCGGAGACTGCTCGATCTCCAGGGCCTTCAAGCGATGCACCGCAAGGTAGGCTTGTTTTGGCGGCGAAAAGGACCAACAGGCCGGATATTCTCAGAAGGTTTAAGCATTATCGGGGAGGTTGGGACATTGTGGATCGGCATTACTGGGCTTCTGTTGGATTTACAGGTGCTGTTGGTTTCATTATTGCCGTCCTGTGGTTTGTTGCTTTTGGCATGATACTGGTGGTTCATCATTGCTGTGGATGGAAGATAAACATTAAAGATGAAGGATCACACCGCTTGCAGAGGATATGCTTGATTATGCTACTGGTCTTCACATGTGCTTCAGCGACTGGATGTATTCTTCTTTCTGTTGGGCAAGATGAATTTCATGACGAAGTGATGCATACTTTAAATTATGTTGTTAACCAGTCAGACTACACTGTGCAGACCCTGAGAAATGTCACAGGGTATCTGACCCTTGCAAAGGCTATTAACGTGGCCCAGGTATTCTTACCTTCTGATGTCATGGATGATATTGACAAGCTGAATGTGGATCTGAACACTGCAGCGGACACACTAACGGAGAAGACAAGTGAAAATTCTGTTAAAGTAAAAAGAGTCTTCAATATTGTGCGTTCATCTTTAATCACCGTAGCAGCAGTGATGCTTCTCTTAGCTGTGATTGGTCTTTTTCTGTCCCTCCTTAGGCACCAACATGCGATCCACATATTTATTGTTAGTGGATGGCTACTTGTGGCAATTACATTCATTCTTTCCGGAGGTTTTGTTATCCTCAACAATGCTGTTTCCGACACCTGTGTAGCCATGGAAGAATGGGTAGAACATCCTCACGCCGAAACAGCACTTAGCAACATCCTTCCATGTGTTGACCAGAGAACCACGGACAAGACCCTTAGTCAGAGTAAGCAGATTATCATTGACATTGTAAATGTTGTCAACCAGTTCATCTATACCTATGCCAATACGTACCCTTCCCCTGCAAGTCCATACCCATACTATTACAATCAGTCGGGGCCTCTGATGCCACCTCTCTGTTACCCGTACGATTCTCAGCTGAGAGACCGACAGTGTGGGGATCAAGAGGTGTCTATTTCAAATGCTTCTTTGGTTTGGCAGAACTATATATGTGAAGTCTCAGCATCCGGTATGTGCACAACTGTCGGAAGGGTGAACCCGGACATCTACAATCAGCTTGTTGCAGCTGTTAACGAGTGCTATGCACTTCAGCACTACACCCCGCCATTACTGAACCTCCAGGATTGTAATTTTGTTCGAGACACATTTCGAACAATCACATCAAGTTACTGTCCTCCACTGGACCATTACCTGAAAATTGTGAATGCAGGATTGGCCCTGATTTCAGTTGGAGTCTTGCTGTGCCTTGTTCTCTGGATACTTTTTGCAAACCGCCCCAGAACGGAGGAAGAGTTTGCAAAACTATCCTTACCAATAAAAGGCAGGAGCAAAAGTAGCAGTTCCGGCAATAATACCAATAATAGCAGCAGCAGCAATGCATTGTCATCAGACACATCAAATGAAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

572

Amino Acids

63.24

Weight (kDa)

6.53

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005085)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71110
fragaria_vesca	FvH4_4g32140 FvH4_4g32140 FvH4_4g32140 FvH4_4g32140 FvH4_4g32140
malus_domestica	MD13G1028100.v1.1 MD16G1031000.v1.1
prunus_persica	Prupe.1G322100_v2.0.a1 Prupe.1G322100_v2.0.a1
pyrus_communis	pycom13g02650 pycom16g02700
rosa_chinensis	RchiOBHm_Chr4g0440851
rosa_laevigata	RLG00000006143
rosa_multiflora	Rmu_sc0000424.1_g000016 Rmu_sc0005054.1_g000011 Rmu_sc0012089.1_g000001 Rmu_sc0027667.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381680
rosa_rugosa	Rorug04G0329000 Rorug04G0329100.1
rosa_samantha	Rh4AG380700 Rh4BG393700 Rh4CG408600 Rh4DG387100 Rh5AG282100 Rh5CG319000 Rh5DG296600
rosa_wichuraiana	Rw0G001420 Rw4G032780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	858
AccIII	TCCGGA	1 cut(s)	926
AciI	CCGC	8 cut(s)	27, 37, 209, 230, 445, 719, 1409, 1579
AclWI	GGATC	6 cut(s)	173, 309, 445, 711, 865, 1254
AcsI	RAATTY	2 cut(s)	533, 748
AcuI	CTGAAG	2 cut(s)	477, 1379
AfaI	GTAC	2 cut(s)	1139, 1214
AfeI	AGCGCT	1 cut(s)	8
AfiI	CCNNNNNNNGG	5 cut(s)	363, 634, 855, 1588, 1625
AflIII	ACRYGT	1 cut(s)	485
AgsI	TTSAA	3 cut(s)	198, 775, 1266
AhdI	GACNNNNNGTC	1 cut(s)	1065
AjnI	CCWGG	3 cut(s)	187, 651, 1425
AjuI	GAANNNNNNNTTGG	2 cut(s)	1502, 1534
AluBI	AGCT	6 cut(s)	69, 694, 827, 1225, 1363, 1373
AluI	AGCT	6 cut(s)	69, 694, 827, 1225, 1363, 1373
Alw21I	GWGCWC	1 cut(s)	1325
Alw26I	GTCTC	5 cut(s)	105, 167, 1224, 1309, 1440
Alw44I	GTGCAC	1 cut(s)	1321
AlwI	GGATC	6 cut(s)	173, 309, 445, 711, 865, 1254
AlwNI	CAGNNNCTG	3 cut(s)	338, 500, 601
Aor13HI	TCCGGA	1 cut(s)	926
Aor51HI	AGCGCT	1 cut(s)	8
AoxI	GGCC	5 cut(s)	191, 248, 648, 1184, 1521
ApaLI	GTGCAC	1 cut(s)	1321
ApeKI	GCWGC	7 cut(s)	69, 716, 806, 1370, 1671, 1674, 1677
ApoI	RAATTY	2 cut(s)	533, 748
AspLEI	GCGC	1 cut(s)	9
AspS9I	GGNCC	7 cut(s)	101, 191, 240, 649, 1184, 1489, 1522
AsuC2I	CCSGG	2 cut(s)	147, 1346
AsuHPI	GGTGA	2 cut(s)	790, 1351
AsuII	TTCGAA	1 cut(s)	1456
AvaII	GGWCC	3 cut(s)	101, 240, 1489
AxyI	CCTNAGG	1 cut(s)	854
BaeGI	GKGCMC	1 cut(s)	1325
BanI	GGYRCC	1 cut(s)	858
BbsI	GAAGAC	3 cut(s)	472, 743, 763
Bbv12I	GWGCWC	1 cut(s)	1325
BbvI	GCAGC	7 cut(s)	56, 728, 818, 1382, 1683, 1686, 1689
BccI	CCATC	2 cut(s)	405, 888
BceAI	ACGGC	1 cut(s)	341
BcgI	CGANNNNNNTGC	4 cut(s)	1312, 1346, 1370, 1404
BciT130I	CCWGG	3 cut(s)	189, 653, 1427
BciVI	GTATCC	1 cut(s)	1557
BcnI	CCSGG	2 cut(s)	147, 1346
BcoDI	GTCTC	5 cut(s)	105, 167, 1224, 1309, 1440
BfaI	CTAG	3 cut(s)	66, 131, 1714
BfmI	CTRYAG	1 cut(s)	714
BfoI	RGCGCY	1 cut(s)	10
BfuI	GTATCC	1 cut(s)	1557
BisI	GCNGC	8 cut(s)	70, 231, 717, 807, 1371, 1672, 1675, 1678
BlsI	GCNGC	8 cut(s)	71, 232, 718, 808, 1372, 1673, 1676, 1679
Bme1390I	CCNGG	5 cut(s)	147, 189, 653, 1346, 1427
Bme18I	GGWCC	3 cut(s)	101, 240, 1489
BmeRI	GACNNNNNGTC	1 cut(s)	1065
BmgT120I	GGNCC	7 cut(s)	101, 191, 240, 649, 1184, 1489, 1522
BmiI	GGNNCC	3 cut(s)	103, 860, 1185
BmrFI	CCNGG	5 cut(s)	147, 189, 653, 1346, 1427
BmrI	ACTGGG	1 cut(s)	322
BmsI	GCATC	5 cut(s)	193, 540, 804, 1182, 1319
BmuI	ACTGGG	1 cut(s)	322
BpiI	GAAGAC	3 cut(s)	472, 743, 763
BplI	GAGNNNNNCTC	2 cut(s)	102, 134
BpmI	CTGGAG	2 cut(s)	171, 1409
Bpu14I	TTCGAA	1 cut(s)	1456
BpuEI	CTTGAG	1 cut(s)	104
BpuMI	CCSGG	2 cut(s)	147, 1346
BsaAI	YACGTR	1 cut(s)	1137
BsaI	GGTCTC	2 cut(s)	105, 1224
BsaJI	CCNNGG	5 cut(s)	146, 188, 651, 975, 1050
BsaWI	WCCGGW	2 cut(s)	926, 1313
BsaXI	ACNNNNNCTCC	8 cut(s)	921, 951, 1407, 1437, 1583, 1613, 1624, 1654
Bsc4I	CCNNNNNNNGG	5 cut(s)	363, 634, 855, 1588, 1625
Bse118I	RCCGGY	1 cut(s)	13
Bse1I	ACTGG	7 cut(s)	317, 393, 480, 505, 577, 1111, 1491
Bse21I	CCTNAGG	1 cut(s)	854
Bse3DI	GCAATG	2 cut(s)	400, 1687
BseAI	TCCGGA	1 cut(s)	926
BseBI	CCWGG	3 cut(s)	189, 653, 1427
BseDI	CCNNGG	5 cut(s)	146, 188, 651, 975, 1050
BseGI	GGATG	8 cut(s)	142, 416, 509, 685, 899, 994, 1023, 1310
BseLI	CCNNNNNNNGG	5 cut(s)	363, 634, 855, 1588, 1625
BseMI	GCAATG	2 cut(s)	400, 1687
BseMII	CTCAG	5 cut(s)	274, 593, 1217, 1235, 1320
BseNI	ACTGG	7 cut(s)	317, 393, 480, 505, 577, 1111, 1491
BseSI	GKGCMC	1 cut(s)	1325
BseXI	GCAGC	7 cut(s)	56, 728, 818, 1382, 1683, 1686, 1689
BsgI	GTGCAG	1 cut(s)	614
BshFI	GGCC	5 cut(s)	193, 250, 650, 1186, 1523
BshNI	GGYRCC	1 cut(s)	858
BsiHKAI	GWGCWC	1 cut(s)	1325
BsiSI	CCGG	7 cut(s)	14, 146, 251, 927, 1314, 1346, 1650
BsiWI	CGTACG	1 cut(s)	1212
BslFI	GGGAC	2 cut(s)	305, 832
BslI	CCNNNNNNNGG	5 cut(s)	363, 634, 855, 1588, 1625
BsmAI	GTCTC	5 cut(s)	105, 167, 1224, 1309, 1440
BsmFI	GGGAC	2 cut(s)	305, 832
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	5 cut(s)	193, 250, 650, 1186, 1523
Bso31I	GGTCTC	2 cut(s)	105, 1224
Bsp119I	TTCGAA	1 cut(s)	1456
Bsp1286I	GDGCHC	1 cut(s)	1325
Bsp13I	TCCGGA	1 cut(s)	926
Bsp143I	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
Bsp19I	CCATGG	1 cut(s)	975
BspACI	CCGC	8 cut(s)	27, 37, 209, 230, 445, 719, 1409, 1579
BspANI	GGCC	5 cut(s)	193, 250, 650, 1186, 1523
BspCNI	CTCAG	5 cut(s)	273, 594, 1218, 1234, 1319
BspEI	TCCGGA	1 cut(s)	926
BspHI	TCATGA	1 cut(s)	538
BspLI	GGNNCC	3 cut(s)	103, 860, 1185
BspMAI	CTGCAG	1 cut(s)	718
BspPI	GGATC	6 cut(s)	173, 309, 445, 711, 865, 1254
BspT104I	TTCGAA	1 cut(s)	1456
BspT107I	GGYRCC	1 cut(s)	858
BspTNI	GGTCTC	2 cut(s)	105, 1224
BsrDI	GCAATG	2 cut(s)	400, 1687
BsrFI	RCCGGY	1 cut(s)	13
BsrI	ACTGG	7 cut(s)	317, 393, 480, 505, 577, 1111, 1491
BssAI	RCCGGY	1 cut(s)	13
BssECI	CCNNGG	5 cut(s)	146, 188, 651, 975, 1050
BssMI	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
BssT1I	CCWWGG	1 cut(s)	975
Bst2UI	CCWGG	3 cut(s)	189, 653, 1427
Bst4CI	ACNGT	5 cut(s)	592, 802, 1239, 1330, 1478
Bst6I	CTCTTC	1 cut(s)	1590
BstBAI	YACGTR	1 cut(s)	1137
BstBI	TTCGAA	1 cut(s)	1456
BstC8I	GCNNGC	2 cut(s)	11, 449
BstDEI	CTNAG	9 cut(s)	260, 602, 823, 854, 1016, 1064, 1221, 1226, 1306
BstDSI	CCRYGG	2 cut(s)	975, 1050
BstENI	CCTNNNNNAGG	1 cut(s)	632
BstF5I	GGATG	8 cut(s)	142, 416, 509, 685, 899, 994, 1023, 1310
BstH2I	RGCGCY	1 cut(s)	10
BstHHI	GCGC	1 cut(s)	9
BstKTI	GATC	7 cut(s)	168, 185, 304, 440, 706, 873, 1249
BstMAI	GTCTC	5 cut(s)	105, 167, 1224, 1309, 1440
BstMBI	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
BstMWI	GCNNNNNNNGC	7 cut(s)	217, 1010, 1192, 1520, 1641, 1650, 1677
BstNI	CCWGG	3 cut(s)	189, 653, 1427
BstNSI	RCATGY	2 cut(s)	489, 869
BstSCI	CCNGG	5 cut(s)	145, 187, 651, 1344, 1425
BstSFI	CTRYAG	1 cut(s)	714
BstSLI	GKGCMC	1 cut(s)	1325
BstSNI	TACGTA	1 cut(s)	1137
BstV1I	GCAGC	7 cut(s)	56, 728, 818, 1382, 1683, 1686, 1689
BstV2I	GAAGAC	3 cut(s)	472, 743, 763
BstX2I	RGATCY	2 cut(s)	165, 703
BstYI	RGATCY	2 cut(s)	165, 703
Bsu36I	CCTNAGG	1 cut(s)	854
BsuI	GTATCC	1 cut(s)	1557
BsuRI	GGCC	5 cut(s)	193, 250, 650, 1186, 1523
BtgI	CCRYGG	2 cut(s)	975, 1050
BtgZI	GCGATG	1 cut(s)	216
BtsCI	GGATG	8 cut(s)	142, 416, 509, 685, 899, 994, 1023, 1310
BtsI	GCAGTG	2 cut(s)	711, 816
BtsIMutI	CAGTG	5 cut(s)	588, 711, 816, 1244, 1484
Cac8I	GCNNGC	2 cut(s)	11, 449
CaiI	CAGNNNCTG	3 cut(s)	338, 500, 601
CciI	TCATGA	1 cut(s)	538
CfoI	GCGC	1 cut(s)	9
Cfr10I	RCCGGY	1 cut(s)	13
Cfr13I	GGNCC	7 cut(s)	101, 191, 240, 649, 1184, 1489, 1522
Csp6I	GTAC	2 cut(s)	1138, 1213
CviAII	CATG	7 cut(s)	382, 486, 539, 676, 866, 976, 1032
CviQI	GTAC	2 cut(s)	1138, 1213
DdeI	CTNAG	9 cut(s)	260, 602, 823, 854, 1016, 1064, 1221, 1226, 1306
DpnI	GATC	7 cut(s)	167, 184, 303, 439, 705, 872, 1248
DpnII	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
DraI	TTTAAA	1 cut(s)	561
DriI	GACNNNNNGTC	1 cut(s)	1065
Eam1104I	CTCTTC	1 cut(s)	1590
Eam1105I	GACNNNNNGTC	1 cut(s)	1065
EarI	CTCTTC	1 cut(s)	1590
Eco105I	TACGTA	1 cut(s)	1137
Eco130I	CCWWGG	1 cut(s)	975
Eco31I	GGTCTC	2 cut(s)	105, 1224
Eco47I	GGWCC	3 cut(s)	101, 240, 1489
Eco47III	AGCGCT	1 cut(s)	8
Eco57I	CTGAAG	2 cut(s)	477, 1379
Eco81I	CCTNAGG	1 cut(s)	854
EcoNI	CCTNNNNNAGG	1 cut(s)	632
EcoO109I	RGGNCCY	2 cut(s)	191, 1184
EcoRII	CCWGG	3 cut(s)	187, 651, 1425
EcoT14I	CCWWGG	1 cut(s)	975
EcoT22I	ATGCAT	2 cut(s)	555, 1687
ErhI	CCWWGG	1 cut(s)	975
FaeI	CATG	7 cut(s)	385, 489, 542, 679, 869, 979, 1035
FalI	AAGNNNNNCTT	2 cut(s)	204, 236
FaqI	GGGAC	2 cut(s)	305, 832
FatI	CATG	7 cut(s)	381, 485, 538, 675, 865, 975, 1031
FauI	CCCGC	1 cut(s)	1416
Fnu4HI	GCNGC	8 cut(s)	70, 231, 717, 807, 1371, 1672, 1675, 1678
FokI	GGATG	8 cut(s)	149, 423, 516, 692, 906, 981, 1010, 1297
Fsp4HI	GCNGC	8 cut(s)	70, 231, 717, 807, 1371, 1672, 1675, 1678
FspBI	CTAG	3 cut(s)	66, 131, 1714
GlaI	GCGC	1 cut(s)	8
GluI	GCNGC	8 cut(s)	70, 231, 717, 807, 1371, 1672, 1675, 1678
GsuI	CTGGAG	2 cut(s)	171, 1409
HaeII	RGCGCY	1 cut(s)	10
HaeIII	GGCC	5 cut(s)	193, 250, 650, 1186, 1523
HapII	CCGG	7 cut(s)	14, 146, 251, 927, 1314, 1346, 1650
HhaI	GCGC	1 cut(s)	9
Hin1II	CATG	7 cut(s)	385, 489, 542, 679, 869, 979, 1035
Hin6I	GCGC	1 cut(s)	7
HinP1I	GCGC	1 cut(s)	7
HincII	GTYRAC	4 cut(s)	574, 1039, 1108, 1378
HindII	GTYRAC	4 cut(s)	574, 1039, 1108, 1378
HinfI	GANTC	5 cut(s)	85, 96, 768, 1217, 1539
HpaI	GTTAAC	2 cut(s)	574, 1378
HpaII	CCGG	7 cut(s)	14, 146, 251, 927, 1314, 1346, 1650
HphI	GGTGA	2 cut(s)	790, 1351
Hpy166II	GTNNAC	6 cut(s)	574, 1039, 1108, 1323, 1342, 1378
Hpy188III	TCNNGA	5 cut(s)	539, 927, 1250, 1445, 1561
Hpy8I	GTNNAC	6 cut(s)	574, 1039, 1108, 1323, 1342, 1378
HpyAV	CCTTC	8 cut(s)	125, 204, 258, 428, 675, 1037, 1152, 1329
HpyCH4III	ACNGT	5 cut(s)	592, 802, 1239, 1330, 1478
HpyCH4IV	ACGT	2 cut(s)	645, 1136
HpyF10VI	GCNNNNNNNGC	7 cut(s)	217, 1010, 1192, 1520, 1641, 1650, 1677
HpyF3I	CTNAG	9 cut(s)	260, 602, 823, 854, 1016, 1064, 1221, 1226, 1306
HpySE526I	ACGT	2 cut(s)	645, 1136
Hsp92II	CATG	7 cut(s)	385, 489, 542, 679, 869, 979, 1035
HspAI	GCGC	1 cut(s)	7
Kpn2I	TCCGGA	1 cut(s)	926
KspAI	GTTAAC	2 cut(s)	574, 1378
Kzo9I	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
LmnI	GCTCC	2 cut(s)	4, 1632
Lsp1109I	GCAGC	7 cut(s)	56, 728, 818, 1382, 1683, 1686, 1689
LweI	GCATC	5 cut(s)	193, 540, 804, 1182, 1319
MaeI	CTAG	3 cut(s)	66, 131, 1714
MaeII	ACGT	2 cut(s)	645, 1136
MaeIII	GTNAC	3 cut(s)	610, 1205, 1472
MalI	GATC	7 cut(s)	167, 184, 303, 439, 705, 872, 1248
MboI	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
MflI	RGATCY	2 cut(s)	165, 703
MhlI	GDGCHC	1 cut(s)	1325
MluCI	AATT	6 cut(s)	533, 562, 748, 909, 1435, 1503
MlyI	GAGTC	4 cut(s)	79, 90, 777, 1548
MmeI	TCCRAC	4 cut(s)	304, 984, 1312, 1516
Mph1103I	ATGCAT	2 cut(s)	555, 1687
MroI	TCCGGA	1 cut(s)	926
MseI	TTAA	8 cut(s)	270, 426, 560, 573, 642, 756, 794, 1377
MslI	CAYNNNNRTG	2 cut(s)	405, 864
MspA1I	CMGCKG	3 cut(s)	719, 1225, 1373
MspI	CCGG	7 cut(s)	14, 146, 251, 927, 1314, 1346, 1650
MspR9I	CCNGG	5 cut(s)	147, 189, 653, 1346, 1427
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	3 cut(s)	189, 653, 1427
MwoI	GCNNNNNNNGC	7 cut(s)	217, 1010, 1192, 1520, 1641, 1650, 1677
NciI	CCSGG	2 cut(s)	147, 1346
NcoI	CCATGG	1 cut(s)	975
NdeII	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
NlaIII	CATG	7 cut(s)	385, 489, 542, 679, 869, 979, 1035
NlaIV	GGNNCC	3 cut(s)	103, 860, 1185
NmuCI	GTSAC	1 cut(s)	610
NsiI	ATGCAT	2 cut(s)	555, 1687
NspI	RCATGY	2 cut(s)	489, 869
NspV	TTCGAA	1 cut(s)	1456
PagI	TCATGA	1 cut(s)	538
PciI	ACATGT	1 cut(s)	485
PctI	GAATGC	1 cut(s)	1516
PfeI	GAWTC	1 cut(s)	1217
Pfl23II	CGTACG	1 cut(s)	1212
PfoI	TCCNGGA	1 cut(s)	1425
PkrI	GCNGC	8 cut(s)	71, 232, 718, 808, 1372, 1673, 1676, 1679
PleI	GAGTC	4 cut(s)	79, 90, 776, 1547
PpsI	GAGTC	4 cut(s)	79, 90, 776, 1547
Ppu21I	YACGTR	1 cut(s)	1137
PscI	ACATGT	1 cut(s)	485
Psp6I	CCWGG	3 cut(s)	187, 651, 1425
PspGI	CCWGG	3 cut(s)	187, 651, 1425
PspLI	CGTACG	1 cut(s)	1212
PspN4I	GGNNCC	3 cut(s)	103, 860, 1185
PspPI	GGNCC	7 cut(s)	101, 191, 240, 649, 1184, 1489, 1522
PstI	CTGCAG	1 cut(s)	718
PstNI	CAGNNNCTG	3 cut(s)	338, 500, 601
PsuI	RGATCY	2 cut(s)	165, 703
PvuII	CAGCTG	2 cut(s)	1225, 1373
RsaI	GTAC	2 cut(s)	1139, 1214
RsaNI	GTAC	2 cut(s)	1138, 1213
RseI	CAYNNNNRTG	2 cut(s)	405, 864
SaqAI	TTAA	8 cut(s)	270, 426, 560, 573, 642, 756, 794, 1377
SatI	GCNGC	8 cut(s)	70, 231, 717, 807, 1371, 1672, 1675, 1678
Sau3AI	GATC	7 cut(s)	165, 182, 301, 437, 703, 870, 1246
Sau96I	GGNCC	7 cut(s)	101, 191, 240, 649, 1184, 1489, 1522
SchI	GAGTC	4 cut(s)	79, 90, 777, 1548
ScrFI	CCNGG	5 cut(s)	147, 189, 653, 1346, 1427
SduI	GDGCHC	1 cut(s)	1325
SfaNI	GCATC	5 cut(s)	193, 540, 804, 1182, 1319
SfcI	CTRYAG	1 cut(s)	714
SfuI	TTCGAA	1 cut(s)	1456
SinI	GGWCC	3 cut(s)	101, 240, 1489
SmiMI	CAYNNNNRTG	2 cut(s)	405, 864
SmlI	CTYRAG	1 cut(s)	119
SmoI	CTYRAG	1 cut(s)	119
SnaBI	TACGTA	1 cut(s)	1137
Sse9I	AATT	6 cut(s)	533, 562, 748, 909, 1435, 1503
SsiI	CCGC	8 cut(s)	27, 37, 209, 230, 445, 719, 1409, 1579
SspI	AATATT	1 cut(s)	778
SspMI	CTAG	3 cut(s)	66, 131, 1714
StyD4I	CCNGG	5 cut(s)	145, 187, 651, 1344, 1425
StyI	CCWWGG	1 cut(s)	975
TaaI	ACNGT	5 cut(s)	592, 802, 1239, 1330, 1478
TaiI	ACGT	2 cut(s)	648, 1139
TaqI	TCGA	3 cut(s)	181, 1444, 1456
TaqII	GACCGA	1 cut(s)	1248
TasI	AATT	6 cut(s)	533, 562, 748, 909, 1435, 1503
TauI	GCSGC	1 cut(s)	233
TfiI	GAWTC	1 cut(s)	1217
Tru1I	TTAA	8 cut(s)	270, 426, 560, 573, 642, 756, 794, 1377
Tru9I	TTAA	8 cut(s)	270, 426, 560, 573, 642, 756, 794, 1377
TscAI	CASTG	5 cut(s)	595, 718, 816, 1244, 1491
TseFI	GTSAC	1 cut(s)	610
TseI	GCWGC	7 cut(s)	69, 716, 806, 1370, 1671, 1674, 1677
Tsp45I	GTSAC	1 cut(s)	610
TspDTI	ATGAA	9 cut(s)	153, 337, 386, 447, 527, 546, 777, 907, 1105
TspGWI	ACGGA	3 cut(s)	746, 1067, 1604
TspRI	CASTG	5 cut(s)	595, 718, 816, 1244, 1491
VneI	GTGCAC	1 cut(s)	1321
VpaK11BI	GGWCC	3 cut(s)	101, 240, 1489
XagI	CCTNNNNNAGG	1 cut(s)	632
XapI	RAATTY	2 cut(s)	533, 748
XceI	RCATGY	2 cut(s)	489, 869
XspI	CTAG	3 cut(s)	66, 131, 1714
Zsp2I	ATGCAT	2 cut(s)	555, 1687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.