Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005054.1

Orthogroup ID

OG0005085

Physical Location & Seq

Genomic Coordinates Forward (+)

35397 .. 49433

Gene Structure 14037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005054.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

atggaaggtgcaatcttggtctctgcgccgtcctctcctctatcttcaacttctcttccctctgtgactctaacccaagatgagctgaagaaaatcgcggcctacaaggccgtcgagtacgtcgagtccggcatggttctcggcctcggcaccggctccacggccaagcacgccgtcgaccgaatcggcgatctcctccgccaggggaagctccacaacattgtcggaatacccacctccagaaagacccacgagcaagctgtctccgtcggaatcccactcgccgacctcgactcccatcccgtcatcgatctcgccatcgacggcgccgacgaggtggacccccacctgaacctggtcaagggccgaggtgggtcgctgctgagagagaagatggtggagggtgcctgccggaaatttgtggtcattgtcgatgagtccaagcttgtgaagcatttgggtggtagtgggctggctatgccggtggaggttgtgccgttttgctggaaattcactgccaggaggctccagaacttgtttgaggattcgggttgtgttgcgaagctgaggacttcctcgggggcaaatggtgagccttatgtgacagacaatgggaactacattgtggacctgtatttcaaggaggacattggggatttgaaggccgcgagtgatgtgattttgcagcttgctggagttgtggagcatgggatgttcctggacatggccaccactgtgattgttgcaggagagatgggcataacgcttgaactcaagtcagacaaatttagccaaggggatcaaactctgggggctgtggagaaatggaatctgggagactatacaatcctcagggcctgcgagccttgcacctcaaggcgcagggcatctggaggatcttattcctcccttcttgttttctcatattttcttaatcaatctatcccaaacttttccagatctgactttatcctccatgaactcttccgccaacaccttatatcatcactcctccctttacctgagttcttccatgaaagttttcatggccactgctctaaagtgaaaatcacttacctaggtgagtatgggtgctcacgcacggatggtgcatcactgttggagaaagacgaaggtgcttccagatgtggtttcaaactttccaacccatgtctcagatctgttctttggggttttttgattactgagttacgcggcggctttgggcagcttcgagatgagaatctggggtcttggcaaaatgagctatctgagactgcagaggccccagggccttcgagcgatggtcctgagcttgtattggcggcgaaaaggaccaagaggcctgatattcttgatgggttcaagcgttatcgaggaggctgggacatagcgaatcgccattactgggcctctgttggattcacaggtgccgctggtttcattatttctgtcctatggtttgttgcttttggcatcgttcttgtggttcatcattgctgtggatggagaattaacattaaagatgaaggatcaccccgctcacagaggatgtgtctgattattctgatagtcttcacatgtgctgccacggttggatgcattcttctttctgttgggcaagctgagtttcatgaagaagtcctgcatactctaaatttcgttgtaaaccagtcagactacactgtacagaccttgagaaatgtgacagagtatctgtcccttgcaaaggatattaatgtggcccaggttttcctacctactgatgtcatggatagtattgacaagttgaatgtggatctcaacactgcagcagatacattaacagagaagacgagtgaaaattctgataaagtgaaaaaagtcttcagtattgtgcgttccgttttaattgccgtagcagcagtaatgcttttcctagctgtgatcggtcttcttctgtccgtccttcggcaccaacatgcaattcacatattcattgttagtggatggctacttgttgcaattacattcattctttgtggtgcctttgtgatcctcaacaatgctgtttctgacacctgtatggcaatggaagaatgggtagaaaatccccatgctgaaacagcacttagcaacgtccttccatgtgttgaccagaaaaccacaaaccagacactgagccagagtaaaggaattatcaatgacatggtcactgttgtcaacacgttcatctacacctatgccaatacgtatccgtcgcattctgatccgtattattacaatcagtctggacctctgatgccagctctttgttacccctatgattctgagttaagagatactcagtgtggggatcaacaggtttctattacaaatgcttctttggtttggcagaactatacatgtgaagtctcagcatctgggatgtgcatcactcccggaagggtgaagccagagatctacactcagctagttgcagcagttaatgagagctatgcactacagcactatacccctcctttactcagcctccaagattgtaattttgtccgagacacatttcgaacaatcacctcgagttattgccccccattggaccactacctgaaaattgtgaatgcaggtttggccctaatatcagttggagtcttgctctgtcttcttctctgggtactctatgcaaaccgcccccaaagggaggaagcgtttgcgaaacagtccttacccgtaaaagacaggagtatgaagagcagttcaaacaatcatagtcataatagcagcagcgatgtaacaacatcgaacatatcaaacggagtctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

933

Amino Acids

102.32

Weight (kDa)

5.77

Isoelectric Point (pI)

38.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005085)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71110
fragaria_vesca	FvH4_4g32140 FvH4_4g32140 FvH4_4g32140 FvH4_4g32140 FvH4_4g32140
malus_domestica	MD13G1028100.v1.1 MD16G1031000.v1.1
prunus_persica	Prupe.1G322100_v2.0.a1 Prupe.1G322100_v2.0.a1
pyrus_communis	pycom13g02650 pycom16g02700
rosa_chinensis	RchiOBHm_Chr4g0440851
rosa_laevigata	RLG00000006143
rosa_multiflora	Rmu_sc0000424.1_g000016 Rmu_sc0005054.1_g000011 Rmu_sc0012089.1_g000001 Rmu_sc0027667.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381680
rosa_rugosa	Rorug04G0329000 Rorug04G0329100.1
rosa_samantha	Rh4AG380700 Rh4BG393700 Rh4CG408600 Rh4DG387100 Rh5AG282100 Rh5CG319000 Rh5DG296600
rosa_wichuraiana	Rw0G001420 Rw4G032780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2594
AccB1I	GGYRCC	6 cut(s)	149, 326, 404, 1430, 1953, 2024
AccBSI	CCGCTC	1 cut(s)	1542
AccI	GTMKAC	1 cut(s)	177
AccII	CGCG	3 cut(s)	98, 668, 1215
AclWI	GGATC	7 cut(s)	807, 904, 1540, 1806, 2029, 2243, 2343
AcoI	YGGCCR	3 cut(s)	162, 726, 1048
AcsI	RAATTY	5 cut(s)	416, 509, 785, 1657, 1843
AcuI	CTGAAG	2 cut(s)	107, 1852
AcyI	GRCGYC	1 cut(s)	327
AfaI	GTAC	3 cut(s)	119, 1689, 2655
AflIII	ACRYGT	3 cut(s)	1580, 2205, 2384
AgsI	TTSAA	8 cut(s)	48, 640, 661, 770, 1156, 1366, 1792, 2739
AjnI	CCWGG	6 cut(s)	201, 354, 518, 717, 1288, 1746
AjuI	GAANNNNNNNTTGG	4 cut(s)	1950, 1982, 2591, 2623
AleI	CACNNNNGTG	1 cut(s)	734
Alw21I	GWGCWC	1 cut(s)	1097
Alw26I	GTCTC	7 cut(s)	25, 268, 831, 1178, 1268, 2398, 2529
AlwI	GGATC	7 cut(s)	807, 904, 1540, 1806, 2029, 2243, 2343
AlwNI	CAGNNNCTG	3 cut(s)	858, 2158, 2402
Ama87I	CYCGRG	2 cut(s)	577, 2557
ApeKI	GCWGC	9 cut(s)	379, 685, 1228, 1586, 1811, 1901, 2459, 2760, 2763
ApoI	RAATTY	5 cut(s)	416, 509, 785, 1657, 1843
AseI	ATTAAT	1 cut(s)	1737
Asp700I	GAANNNNTTC	1 cut(s)	1041
AspA2I	CCTAGG	1 cut(s)	1078
AspLEI	GCGC	3 cut(s)	28, 329, 882
AsuC2I	CCSGG	1 cut(s)	2421
AsuHPI	GGTGA	5 cut(s)	602, 1094, 1527, 2440, 2545
AsuII	TTCGAA	1 cut(s)	2545
AvaI	CYCGRG	2 cut(s)	577, 2557
AvaII	GGWCC	6 cut(s)	340, 628, 1307, 1335, 2273, 2578
AvrII	CCTAGG	1 cut(s)	1078
AxyI	CCTNAGG	1 cut(s)	851
BalI	TGGCCA	2 cut(s)	728, 1050
BanI	GGYRCC	6 cut(s)	149, 326, 404, 1430, 1953, 2024
BauI	CACGAG	1 cut(s)	251
BbsI	GAAGAC	5 cut(s)	1567, 1838, 1858, 1925, 2633
Bbv12I	GWGCWC	1 cut(s)	1097
BbvCI	CCTCAGC	1 cut(s)	566
BbvI	GCAGC	9 cut(s)	366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BccI	CCATC	9 cut(s)	306, 326, 388, 748, 1100, 1298, 1352, 1500, 1983
BceAI	ACGGC	7 cut(s)	13, 95, 158, 177, 340, 481, 1880
BcgI	CGANNNNNNTGC	2 cut(s)	121, 155
BciT130I	CCWGG	6 cut(s)	203, 356, 520, 719, 1290, 1748
BciVI	GTATCC	1 cut(s)	2244
BcnI	CCSGG	1 cut(s)	2421
BcoDI	GTCTC	7 cut(s)	25, 268, 831, 1178, 1268, 2398, 2529
BfaI	CTAG	3 cut(s)	1079, 1919, 2453
BfmI	CTRYAG	3 cut(s)	1278, 1809, 2483
BfoI	RGCGCY	1 cut(s)	330
BfuAI	ACCTGC	1 cut(s)	2594
BfuI	GTATCC	1 cut(s)	2244
BglI	GCCNNNNNGGC	1 cut(s)	107
BglII	AGATCT	3 cut(s)	959, 1178, 2439
BlnI	CCTAGG	1 cut(s)	1078
Bme1390I	CCNGG	7 cut(s)	203, 356, 520, 719, 1290, 1748, 2421
Bme18I	GGWCC	6 cut(s)	340, 628, 1307, 1335, 2273, 2578
BmeT110I	CYCGRG	2 cut(s)	577, 2557
BmrFI	CCNGG	7 cut(s)	203, 356, 520, 719, 1290, 1748, 2421
BmrI	ACTGGG	1 cut(s)	1417
BmsI	GCATC	7 cut(s)	896, 1121, 1485, 1589, 2271, 2408, 2421
BmuI	ACTGGG	1 cut(s)	1417
BpiI	GAAGAC	5 cut(s)	1567, 1838, 1858, 1925, 2633
BplI	GAGNNNNNCTC	2 cut(s)	2619, 2651
BpmI	CTGGAG	4 cut(s)	223, 512, 714, 912
Bpu10I	CCTNAGC	2 cut(s)	566, 1311
Bpu14I	TTCGAA	1 cut(s)	2545
BpuEI	CTTGAG	3 cut(s)	758, 859, 1717
BpuMI	CCSGG	1 cut(s)	2421
Bsa29I	ATCGAT	1 cut(s)	309
BsaAI	YACGTR	1 cut(s)	2232
BsaBI	GATNNNNATC	2 cut(s)	1242, 2411
BsaHI	GRCGYC	1 cut(s)	327
BsaI	GGTCTC	1 cut(s)	25
BsaXI	ACNNNNNCTCC	6 cut(s)	278, 308, 2496, 2526, 2672, 2702
Bse118I	RCCGGY	2 cut(s)	152, 481
Bse1I	ACTGG	2 cut(s)	1412, 1672
Bse21I	CCTNAGG	1 cut(s)	851
Bse3DI	GCAATG	2 cut(s)	1495, 2076
Bse8I	GATNNNNATC	2 cut(s)	1242, 2411
BseBI	CCWGG	6 cut(s)	203, 356, 520, 719, 1290, 1748
BseCI	ATCGAT	1 cut(s)	309
BseGI	GGATG	8 cut(s)	298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BseJI	GATNNNNATC	2 cut(s)	1242, 2411
BseMI	GCAATG	2 cut(s)	1495, 2076
BseNI	ACTGG	2 cut(s)	1412, 1672
BseRI	GAGGAG	4 cut(s)	27, 185, 1001, 1392
BseXI	GCAGC	9 cut(s)	366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BseYI	CCCAGC	1 cut(s)	1383
Bsh1236I	CGCG	3 cut(s)	98, 668, 1215
Bsh1285I	CGRYCG	1 cut(s)	181
BshNI	GGYRCC	6 cut(s)	149, 326, 404, 1430, 1953, 2024
BshVI	ATCGAT	1 cut(s)	309
BsiEI	CGRYCG	1 cut(s)	181
BsiHKAI	GWGCWC	1 cut(s)	1097
BsiHKCI	CYCGRG	2 cut(s)	577, 2557
BsiSI	CCGG	5 cut(s)	129, 153, 412, 482, 2421
BslFI	GGGAC	2 cut(s)	1400, 1705
BsmAI	GTCTC	7 cut(s)	25, 268, 831, 1178, 1268, 2398, 2529
BsmFI	GGGAC	2 cut(s)	1400, 1705
BsmI	GAATGC	3 cut(s)	1602, 2242, 2605
Bso31I	GGTCTC	1 cut(s)	25
BsoBI	CYCGRG	2 cut(s)	577, 2557
Bsp119I	TTCGAA	1 cut(s)	2545
Bsp1286I	GDGCHC	1 cut(s)	1097
Bsp1407I	TGTACA	1 cut(s)	1687
BspDI	ATCGAT	1 cut(s)	309
BspFNI	CGCG	3 cut(s)	98, 668, 1215
BspHI	TCATGA	1 cut(s)	1633
BspMAI	CTGCAG	2 cut(s)	1282, 1813
BspMI	ACCTGC	1 cut(s)	2594
BspPI	GGATC	7 cut(s)	807, 904, 1540, 1806, 2029, 2243, 2343
BspQI	GCTCTTC	1 cut(s)	2723
BspT104I	TTCGAA	1 cut(s)	2545
BspT107I	GGYRCC	6 cut(s)	149, 326, 404, 1430, 1953, 2024
BspTNI	GGTCTC	1 cut(s)	25
BsrBI	CCGCTC	1 cut(s)	1542
BsrDI	GCAATG	2 cut(s)	1495, 2076
BsrFI	RCCGGY	2 cut(s)	152, 481
BsrGI	TGTACA	1 cut(s)	1687
BsrI	ACTGG	2 cut(s)	1412, 1672
BssAI	RCCGGY	2 cut(s)	152, 481
BssNI	GRCGYC	1 cut(s)	327
BssSI	CACGAG	1 cut(s)	251
BssT1I	CCWWGG	2 cut(s)	793, 1078
Bst2BI	CACGAG	1 cut(s)	251
Bst2UI	CCWGG	6 cut(s)	203, 356, 520, 719, 1290, 1748
Bst4CI	ACNGT	6 cut(s)	736, 1119, 1594, 1687, 2197, 2700
Bst6I	CTCTTC	3 cut(s)	60, 989, 2723
BstACI	GRCGYC	1 cut(s)	327
BstAUI	TGTACA	1 cut(s)	1687
BstBAI	YACGTR	1 cut(s)	2232
BstBI	TTCGAA	1 cut(s)	2545
BstC8I	GCNNGC	9 cut(s)	171, 258, 409, 474, 690, 859, 863, 1623, 2286
BstDSI	CCRYGG	2 cut(s)	159, 1590
BstENI	CCTNNNNNAGG	3 cut(s)	200, 359, 1727
BstF5I	GGATG	8 cut(s)	298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BstFNI	CGCG	3 cut(s)	98, 668, 1215
BstH2I	RGCGCY	1 cut(s)	330
BstHHI	GCGC	3 cut(s)	28, 329, 882
BstMAI	GTCTC	7 cut(s)	25, 268, 831, 1178, 1268, 2398, 2529
BstMCI	CGRYCG	1 cut(s)	181
BstMWI	GCNNNNNNNGC	9 cut(s)	107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
BstNI	CCWGG	6 cut(s)	203, 356, 520, 719, 1290, 1748
BstNSI	RCATGY	3 cut(s)	1584, 1964, 2388
BstSCI	CCNGG	7 cut(s)	201, 354, 518, 717, 1288, 1746, 2419
BstSFI	CTRYAG	3 cut(s)	1278, 1809, 2483
BstSNI	TACGTA	1 cut(s)	2232
BstUI	CGCG	3 cut(s)	98, 668, 1215
BstV1I	GCAGC	9 cut(s)	366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BstV2I	GAAGAC	5 cut(s)	1567, 1838, 1858, 1925, 2633
BstX2I	RGATCY	5 cut(s)	896, 959, 1178, 1798, 2439
BstYI	RGATCY	5 cut(s)	896, 959, 1178, 1798, 2439
Bsu15I	ATCGAT	1 cut(s)	309
Bsu36I	CCTNAGG	1 cut(s)	851
BsuI	GTATCC	1 cut(s)	2244
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	2 cut(s)	159, 1590
BtgZI	GCGATG	2 cut(s)	1317, 2781
BtsCI	GGATG	8 cut(s)	298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BtsI	GCAGTG	3 cut(s)	513, 1051, 1806
BtsIMutI	CAGTG	9 cut(s)	513, 732, 1051, 1115, 1683, 1806, 2156, 2193, 2333
BveI	ACCTGC	1 cut(s)	2594
Cac8I	GCNNGC	9 cut(s)	171, 258, 409, 474, 690, 859, 863, 1623, 2286
CaiI	CAGNNNCTG	3 cut(s)	858, 2158, 2402
CciI	TCATGA	1 cut(s)	1633
CfoI	GCGC	3 cut(s)	28, 329, 882
Cfr10I	RCCGGY	2 cut(s)	152, 481
ClaI	ATCGAT	1 cut(s)	309
CsiI	ACCWGGT	1 cut(s)	354
Csp6I	GTAC	3 cut(s)	118, 1688, 2654
CspCI	CAANNNNNGTGG	2 cut(s)	721, 756
CviQI	GTAC	3 cut(s)	118, 1688, 2654
DinI	GGCGCC	1 cut(s)	328
EaeI	YGGCCR	3 cut(s)	162, 726, 1048
Eam1104I	CTCTTC	3 cut(s)	60, 989, 2723
EarI	CTCTTC	3 cut(s)	60, 989, 2723
EciI	GGCGGA	2 cut(s)	188, 977
Eco105I	TACGTA	1 cut(s)	2232
Eco130I	CCWWGG	2 cut(s)	793, 1078
Eco147I	AGGCCT	1 cut(s)	1345
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	6 cut(s)	340, 628, 1307, 1335, 2273, 2578
Eco57I	CTGAAG	2 cut(s)	107, 1852
Eco81I	CCTNAGG	1 cut(s)	851
Eco88I	CYCGRG	2 cut(s)	577, 2557
EcoNI	CCTNNNNNAGG	3 cut(s)	200, 359, 1727
EcoO109I	RGGNCCY	3 cut(s)	855, 1285, 1292
EcoRII	CCWGG	6 cut(s)	201, 354, 518, 717, 1288, 1746
EcoT14I	CCWWGG	2 cut(s)	793, 1078
EcoT22I	ATGCAT	1 cut(s)	1604
EgeI	GGCGCC	1 cut(s)	328
EheI	GGCGCC	1 cut(s)	328
ErhI	CCWWGG	2 cut(s)	793, 1078
FaqI	GGGAC	2 cut(s)	1400, 1705
FauI	CCCGC	1 cut(s)	1547
FblI	GTMKAC	1 cut(s)	177
FokI	GGATG	8 cut(s)	285, 724, 1118, 1518, 1564, 1611, 2001, 2419
FspBI	CTAG	3 cut(s)	1079, 1919, 2453
GlaI	GCGC	3 cut(s)	27, 328, 881
GsaI	CCCAGC	1 cut(s)	1387
GsuI	CTGGAG	4 cut(s)	223, 512, 714, 912
HaeII	RGCGCY	1 cut(s)	330
HapII	CCGG	5 cut(s)	129, 153, 412, 482, 2421
HhaI	GCGC	3 cut(s)	28, 329, 882
Hin1I	GRCGYC	1 cut(s)	327
Hin6I	GCGC	3 cut(s)	26, 327, 880
HinP1I	GCGC	3 cut(s)	26, 327, 880
HincII	GTYRAC	3 cut(s)	178, 2134, 2203
HindII	GTYRAC	3 cut(s)	178, 2134, 2203
HindIII	AAGCTT	1 cut(s)	443
HpaII	CCGG	5 cut(s)	129, 153, 412, 482, 2421
HphI	GGTGA	5 cut(s)	602, 1094, 1527, 2440, 2545
Hpy166II	GTNNAC	6 cut(s)	178, 340, 628, 1669, 2134, 2203
Hpy8I	GTNNAC	6 cut(s)	178, 340, 628, 1669, 2134, 2203
Hpy99I	CGWCG	7 cut(s)	116, 125, 179, 272, 326, 335, 2242
HpyAV	CCTTC	8 cut(s)	655, 920, 1127, 1305, 1523, 1958, 2132, 2418
HpyCH4III	ACNGT	6 cut(s)	736, 1119, 1594, 1687, 2197, 2700
HpyCH4IV	ACGT	4 cut(s)	120, 2118, 2207, 2231
HpyF10VI	GCNNNNNNNGC	9 cut(s)	107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
HpySE526I	ACGT	4 cut(s)	120, 2118, 2207, 2231
Hsp92I	GRCGYC	1 cut(s)	327
HspAI	GCGC	3 cut(s)	26, 327, 880
KasI	GGCGCC	1 cut(s)	326
LguI	GCTCTTC	1 cut(s)	2723
LmnI	GCTCC	4 cut(s)	161, 216, 531, 703
Lsp1109I	GCAGC	9 cut(s)	366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
LweI	GCATC	7 cut(s)	896, 1121, 1485, 1589, 2271, 2408, 2421
MabI	ACCWGGT	1 cut(s)	354
MaeI	CTAG	3 cut(s)	1079, 1919, 2453
MaeII	ACGT	4 cut(s)	120, 2118, 2207, 2231
MaeIII	GTNAC	7 cut(s)	64, 601, 1209, 1705, 2191, 2294, 2770
MbiI	CCGCTC	1 cut(s)	1542
MflI	RGATCY	5 cut(s)	896, 959, 1178, 1798, 2439
MhlI	GDGCHC	1 cut(s)	1097
MlsI	TGGCCA	2 cut(s)	728, 1050
MluNI	TGGCCA	2 cut(s)	728, 1050
Mly113I	GGCGCC	1 cut(s)	327
MlyI	GAGTC	5 cut(s)	61, 134, 287, 446, 2637
MmeI	TCCRAC	7 cut(s)	205, 250, 1101, 1188, 1399, 1576, 2605
Mox20I	TGGCCA	2 cut(s)	728, 1050
Mph1103I	ATGCAT	1 cut(s)	1604
MroXI	GAANNNNTTC	1 cut(s)	1041
MscI	TGGCCA	2 cut(s)	728, 1050
MseI	TTAA	8 cut(s)	933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
MslI	CAYNNNNRTG	5 cut(s)	459, 734, 1500, 1959, 2063
Msp20I	TGGCCA	2 cut(s)	728, 1050
MspA1I	CMGCKG	1 cut(s)	1436
MspI	CCGG	5 cut(s)	129, 153, 412, 482, 2421
MspR9I	CCNGG	7 cut(s)	203, 356, 520, 719, 1290, 1748, 2421
Mva1269I	GAATGC	3 cut(s)	1602, 2242, 2605
MvaI	CCWGG	6 cut(s)	203, 356, 520, 719, 1290, 1748
MvnI	CGCG	3 cut(s)	98, 668, 1215
MwoI	GCNNNNNNNGC	9 cut(s)	107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
NarI	GGCGCC	1 cut(s)	327
NciI	CCSGG	1 cut(s)	2421
NmeAIII	GCCGAG	3 cut(s)	120, 126, 392
NmuCI	GTSAC	4 cut(s)	64, 601, 1705, 2191
NsiI	ATGCAT	1 cut(s)	1604
NspI	RCATGY	3 cut(s)	1584, 1964, 2388
NspV	TTCGAA	1 cut(s)	2545
OliI	CACNNNNGTG	1 cut(s)	734
PaeR7I	CTCGAG	1 cut(s)	2557
PagI	TCATGA	1 cut(s)	1633
PasI	CCCWGGG	1 cut(s)	1289
PceI	AGGCCT	1 cut(s)	1345
PciI	ACATGT	2 cut(s)	1580, 2384
PciSI	GCTCTTC	1 cut(s)	2723
PcsI	WCGNNNNNNNCGW	4 cut(s)	120, 288, 327, 330
PctI	GAATGC	3 cut(s)	1602, 2242, 2605
PdmI	GAANNNNTTC	1 cut(s)	1041
PfeI	GAWTC	8 cut(s)	183, 273, 545, 829, 1243, 1396, 1422, 2306
PflFI	GACNNNGTC	1 cut(s)	2189
PfoI	TCCNGGA	2 cut(s)	717, 2419
PleI	GAGTC	5 cut(s)	61, 133, 287, 445, 2636
PluTI	GGCGCC	1 cut(s)	330
PpsI	GAGTC	5 cut(s)	61, 133, 287, 445, 2636
Ppu21I	YACGTR	1 cut(s)	2232
PscI	ACATGT	2 cut(s)	1580, 2384
PshBI	ATTAAT	1 cut(s)	1737
Psp6I	CCWGG	6 cut(s)	201, 354, 518, 717, 1288, 1746
PspFI	CCCAGC	1 cut(s)	1383
PspGI	CCWGG	6 cut(s)	201, 354, 518, 717, 1288, 1746
PspXI	VCTCGAGB	1 cut(s)	2557
PsrI	GAACNNNNNNTAC	2 cut(s)	1864, 1896
PstI	CTGCAG	2 cut(s)	1282, 1813
PstNI	CAGNNNCTG	3 cut(s)	858, 2158, 2402
PsuI	RGATCY	5 cut(s)	896, 959, 1178, 1798, 2439
PsyI	GACNNNGTC	1 cut(s)	2189
RsaI	GTAC	3 cut(s)	119, 1689, 2655
RsaNI	GTAC	3 cut(s)	118, 1688, 2654
RseI	CAYNNNNRTG	5 cut(s)	459, 734, 1500, 1959, 2063
SalI	GTCGAC	1 cut(s)	176
SapI	GCTCTTC	1 cut(s)	2723
SaqAI	TTAA	8 cut(s)	933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
SchI	GAGTC	5 cut(s)	61, 134, 287, 446, 2637
ScrFI	CCNGG	7 cut(s)	203, 356, 520, 719, 1290, 1748, 2421
SduI	GDGCHC	1 cut(s)	1097
SexAI	ACCWGGT	1 cut(s)	354
SfaNI	GCATC	7 cut(s)	896, 1121, 1485, 1589, 2271, 2408, 2421
SfcI	CTRYAG	3 cut(s)	1278, 1809, 2483
SfiI	GGCCNNNNNGGCC	1 cut(s)	107
SfoI	GGCGCC	1 cut(s)	328
Sfr274I	CTCGAG	1 cut(s)	2557
SfuI	TTCGAA	1 cut(s)	2545
SinI	GGWCC	6 cut(s)	340, 628, 1307, 1335, 2273, 2578
SlaI	CTCGAG	1 cut(s)	2557
SmiMI	CAYNNNNRTG	5 cut(s)	459, 734, 1500, 1959, 2063
SmlI	CTYRAG	4 cut(s)	773, 874, 1696, 2557
SmoI	CTYRAG	4 cut(s)	773, 874, 1696, 2557
SnaBI	TACGTA	1 cut(s)	2232
SseBI	AGGCCT	1 cut(s)	1345
SspDI	GGCGCC	1 cut(s)	326
SspMI	CTAG	3 cut(s)	1079, 1919, 2453
StuI	AGGCCT	1 cut(s)	1345
StyD4I	CCNGG	7 cut(s)	201, 354, 518, 717, 1288, 1746, 2419
StyI	CCWWGG	2 cut(s)	793, 1078
TaaI	ACNGT	6 cut(s)	736, 1119, 1594, 1687, 2197, 2700
TaiI	ACGT	4 cut(s)	123, 2121, 2210, 2234
TaqII	GACCGA	2 cut(s)	195, 1919
TatI	WGTACW	1 cut(s)	1687
TauI	GCSGC	6 cut(s)	101, 668, 1218, 1221, 1328, 1436
TfiI	GAWTC	8 cut(s)	183, 273, 545, 829, 1243, 1396, 1422, 2306
Tru1I	TTAA	8 cut(s)	933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
Tru9I	TTAA	8 cut(s)	933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
TscAI	CASTG	9 cut(s)	520, 739, 1058, 1122, 1690, 1813, 2163, 2200, 2333
TseFI	GTSAC	4 cut(s)	64, 601, 1705, 2191
TseI	GCWGC	9 cut(s)	379, 685, 1228, 1586, 1811, 1901, 2459, 2760, 2763
Tsp45I	GTSAC	4 cut(s)	64, 601, 1705, 2191
TspGWI	ACGGA	6 cut(s)	256, 1118, 1873, 1933, 2226, 2241
TspRI	CASTG	9 cut(s)	520, 739, 1058, 1122, 1690, 1813, 2163, 2200, 2333
Tth111I	GACNNNGTC	1 cut(s)	2189
VpaK11BI	GGWCC	6 cut(s)	340, 628, 1307, 1335, 2273, 2578
VspI	ATTAAT	1 cut(s)	1737
XagI	CCTNNNNNAGG	3 cut(s)	200, 359, 1727
XapI	RAATTY	5 cut(s)	416, 509, 785, 1657, 1843
XceI	RCATGY	3 cut(s)	1584, 1964, 2388
XhoI	CTCGAG	1 cut(s)	2557
XmaJI	CCTAGG	1 cut(s)	1078
XmiI	GTMKAC	1 cut(s)	177
XmnI	GAANNNNTTC	1 cut(s)	1041
XspI	CTAG	3 cut(s)	1079, 1919, 2453
Zsp2I	ATGCAT	1 cut(s)	1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.