Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0011639

Physical Location & Seq

Genomic Coordinates Reverse (-)

3135289 .. 3139110

Gene Structure 3822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1045300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGCTACAACTTCTCCAAAGGAAGTTGTTTCGGACGACAAATGGAGGGAGGAGCCAGTGGACAACGCCCGCCGAGCCAAATGGTGGTACTCCACCTTTCACACCGTCACCGCCATGATCGGTGCCGGTGTACTCAGCCTGCCTTATGCCATGGCATACTTAGGATGGGGTCCAGGGACAATGGTGCTGGCAATATCATGGTGCATGACCTTGAACACAATGTGGCAGATGATTCAGCTCCATGAATGTGTTCCGGGAACTCGATTCGACCGATATATAGACCTCGGGCGGCATGCCTTTGGACCAAAGCTCGGGCCGTGGATTGTGCTTCCGCAACAACTGATTGTGCAGGTTGGATGTGACATAGTGTACATGGTCACCGGAGGAAAGTGTCTGAAGAAGTTTGTGGAGCTGGCATGTGCCAATTGCACACCAGTCAAGCAATCGTACTGGATTCTCATCTTTGGTTCCCTTCATTTCTTTCTTTCCCAGCTCCCCAATTTCAACTCTGTTGCCGGTGTTTCTCTAGCAGCAGCCATCATGTCGCTAAGTTATTCAACTATAGCCTGGGCAGGTTGCTTAAGCAAAGGTCGGATTGAAAACGTGAGCTACGCGTACAAGAAAACAAGCCCTGCAGATTACATGTTTAGGGTTTTCAATGCATTAGGTCAAATCTCTTTTGCATTTGCCGGGCATGCAGTGACGCTTGAAATCCAGGCCACAATTCCATCGACTCCCGAGAAGCCGTCGAGAATTCCCATGTGGAAAGGTGCCCTGGGAGCCTACTTTATCAACGCAATTTGCTATTTCCCGGTGGCCCTGATCGGGTACTGGGCTTTTGGTCAAGATGTCGATGATAACGTGCTCATGGATCTTAAGAAACCTGCATGGCTCATTGCTGCTGCTAACCTAATGGTTGTCGTCCATGTCATTGGCAGCTACCAGGTTTATGCTATGCCTGTTTTTGACATGCTTGAGAGGATGATGATGAAAAAAGTAAACTTCCCACCTGGAATTGCACTTAGAGTAATCACGAGATCAGCTTATGTTGCATTTACATTATTTATTGGAGTCACCTTCCCTTTCTTTGGAGACCTTCTTGGTTTCTTTGGTGGATTTGGTTTTGCCCCCACTTCATACTTTCTTCCTTGTATAATGTGGCTGAGAATTAAGAAACCAAAGAGATTCAGCATCCAATGGCTCGTCAACTGGGCTTGCATATTCATTGGAGTGTTCATCATGTTGGCTTCCACAGTTGGTGGTTTTCGTAATATCATTGCTGATGCATCAACATATCGGTTTTACACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0022857 GO:0034220 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

437

Amino Acids

48.82

Weight (kDa)

9.23

Isoelectric Point (pI)

36.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	25 - 420	2.9e-104	Transmembrane amino acid transporter protein
Trp_Tyr_perm	PF03222	27 - 154	8.7e-07	Tryptophan/tyrosine permease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25530
fragaria_vesca	FvH4_4g27830 FvH4_4g27960 FvH4_4g27960 FvH4_4g27960 FvH4_4g27960
malus_domestica	MD13G1045300.v1.1 MD16G1046600.v1.1 MD16G1047100.v1.1
prunus_persica	Prupe.1G306700_v2.0.a1 Prupe.1G306700_v2.0.a1
pyrus_communis	pycom13g03990 pycom16g04100
rosa_chinensis	RchiOBHm_Chr4g0435661
rosa_laevigata	RLG00000006569
rosa_multiflora	Rmu_sc0000051.1_g000010
rosa_rugosa	Rorug04G0287800
rosa_samantha	Rh4AG342900
rosa_wichuraiana	Rw4G029930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	340, 563, 892
AccB1I	GGYRCC	2 cut(s)	122, 770
AccB7I	CCANNNNNTGG	1 cut(s)	84
AccII	CGCG	1 cut(s)	614
AciI	CCGC	4 cut(s)	70, 111, 289, 332
AclWI	GGATC	1 cut(s)	879
AcsI	RAATTY	1 cut(s)	753
AcuI	CTGAAG	1 cut(s)	416
AdeI	CACNNNGTG	1 cut(s)	222
AfaI	GTAC	6 cut(s)	89, 132, 371, 449, 617, 830
AfiI	CCNNNNNNNGG	4 cut(s)	84, 311, 825, 1088
AflII	CTTAAG	2 cut(s)	580, 875
AflIII	ACRYGT	3 cut(s)	612, 642, 1305
AgsI	TTSAA	6 cut(s)	214, 505, 558, 599, 658, 710
AjnI	CCWGG	6 cut(s)	172, 566, 714, 774, 942, 1009
AluBI	AGCT	7 cut(s)	238, 310, 412, 493, 609, 939, 1043
AluI	AGCT	7 cut(s)	238, 310, 412, 493, 609, 939, 1043
Alw21I	GWGCWC	1 cut(s)	867
Alw26I	GTCTC	1 cut(s)	1086
AlwI	GGATC	1 cut(s)	879
Ama87I	CYCGRG	3 cut(s)	284, 311, 737
AoxI	GGCC	3 cut(s)	314, 717, 816
ApeKI	GCWGC	5 cut(s)	530, 533, 899, 902, 936
ApoI	RAATTY	1 cut(s)	753
Asp700I	GAANNNNTTC	1 cut(s)	249
AspS9I	GGNCC	4 cut(s)	170, 302, 314, 817
AsuC2I	CCSGG	3 cut(s)	255, 691, 812
AsuHPI	GGTGA	3 cut(s)	100, 370, 1066
AvaI	CYCGRG	3 cut(s)	284, 311, 737
AvaII	GGWCC	2 cut(s)	170, 302
BaeGI	GKGCMC	1 cut(s)	775
BanI	GGYRCC	2 cut(s)	122, 770
BauI	CACGAG	1 cut(s)	1033
Bbv12I	GWGCWC	1 cut(s)	867
BbvI	GCAGC	5 cut(s)	542, 545, 886, 889, 948
BccI	CCATC	3 cut(s)	159, 545, 736
BceAI	ACGGC	2 cut(s)	301, 730
BciT130I	CCWGG	6 cut(s)	174, 568, 716, 776, 944, 1011
BcnI	CCSGG	3 cut(s)	255, 691, 812
BcoDI	GTCTC	1 cut(s)	1086
BfaI	CTAG	1 cut(s)	527
BfmI	CTRYAG	2 cut(s)	561, 633
BfrI	CTTAAG	2 cut(s)	580, 875
BfuAI	ACCTGC	3 cut(s)	340, 563, 892
BisI	GCNGC	6 cut(s)	290, 531, 534, 900, 903, 937
BlsI	GCNGC	6 cut(s)	291, 532, 535, 901, 904, 938
Bme1390I	CCNGG	9 cut(s)	174, 255, 568, 691, 716, 776, 812, 944, 1011
Bme18I	GGWCC	2 cut(s)	170, 302
BmeT110I	CYCGRG	3 cut(s)	284, 311, 737
BmgT120I	GGNCC	4 cut(s)	170, 302, 314, 817
BmiI	GGNNCC	6 cut(s)	54, 124, 171, 469, 772, 781
BmrFI	CCNGG	9 cut(s)	174, 255, 568, 691, 716, 776, 812, 944, 1011
BmrI	ACTGGG	2 cut(s)	841, 1219
BmsI	GCATC	3 cut(s)	1200, 1273, 1295
BmuI	ACTGGG	2 cut(s)	841, 1219
BpuEI	CTTGAG	1 cut(s)	995
BpuMI	CCSGG	3 cut(s)	255, 691, 812
BsaAI	YACGTR	1 cut(s)	1308
BsaBI	GATNNNNATC	1 cut(s)	458
BsaI	GGTCTC	1 cut(s)	1086
BsaJI	CCNNGG	7 cut(s)	150, 173, 283, 317, 567, 774, 775
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	4 cut(s)	84, 311, 825, 1088
Bse118I	RCCGGY	2 cut(s)	125, 515
Bse1I	ACTGG	5 cut(s)	56, 434, 455, 836, 1214
Bse3DI	GCAATG	2 cut(s)	894, 1275
Bse8I	GATNNNNATC	1 cut(s)	458
BseBI	CCWGG	6 cut(s)	174, 568, 716, 776, 944, 1011
BseDI	CCNNGG	7 cut(s)	150, 173, 283, 317, 567, 774, 775
BseGI	GGATG	4 cut(s)	170, 362, 987, 1191
BseJI	GATNNNNATC	1 cut(s)	458
BseLI	CCNNNNNNNGG	4 cut(s)	84, 311, 825, 1088
BseMI	GCAATG	2 cut(s)	894, 1275
BseMII	CTCAG	2 cut(s)	148, 1154
BseNI	ACTGG	5 cut(s)	56, 434, 455, 836, 1214
BseRI	GAGGAG	1 cut(s)	65
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	5 cut(s)	542, 545, 886, 889, 948
BseYI	CCCAGC	1 cut(s)	489
BsgI	GTGCAG	1 cut(s)	368
Bsh1236I	CGCG	1 cut(s)	614
Bsh1285I	CGRYCG	1 cut(s)	271
BshFI	GGCC	3 cut(s)	316, 719, 818
BshNI	GGYRCC	2 cut(s)	122, 770
BsiEI	CGRYCG	1 cut(s)	271
BsiHKAI	GWGCWC	1 cut(s)	867
BsiHKCI	CYCGRG	3 cut(s)	284, 311, 737
BsiSI	CCGG	6 cut(s)	126, 254, 381, 516, 690, 812
BslFI	GGGAC	1 cut(s)	190
BslI	CCNNNNNNNGG	4 cut(s)	84, 311, 825, 1088
BsmAI	GTCTC	1 cut(s)	1086
BsmFI	GGGAC	1 cut(s)	190
BsnI	GGCC	3 cut(s)	316, 719, 818
Bso31I	GGTCTC	1 cut(s)	1086
BsoBI	CYCGRG	3 cut(s)	284, 311, 737
Bsp1286I	GDGCHC	2 cut(s)	775, 867
Bsp1407I	TGTACA	1 cut(s)	369
Bsp143I	GATC	4 cut(s)	117, 822, 871, 1037
Bsp19I	CCATGG	1 cut(s)	150
BspACI	CCGC	4 cut(s)	70, 111, 289, 332
BspANI	GGCC	3 cut(s)	316, 719, 818
BspCNI	CTCAG	2 cut(s)	147, 1155
BspFNI	CGCG	1 cut(s)	614
BspLI	GGNNCC	6 cut(s)	54, 124, 171, 469, 772, 781
BspMAI	CTGCAG	1 cut(s)	637
BspMI	ACCTGC	3 cut(s)	340, 563, 892
BspPI	GGATC	1 cut(s)	879
BspT107I	GGYRCC	2 cut(s)	122, 770
BspTI	CTTAAG	2 cut(s)	580, 875
BspTNI	GGTCTC	1 cut(s)	1086
BsrDI	GCAATG	2 cut(s)	894, 1275
BsrFI	RCCGGY	2 cut(s)	125, 515
BsrGI	TGTACA	1 cut(s)	369
BsrI	ACTGG	5 cut(s)	56, 434, 455, 836, 1214
BssAI	RCCGGY	2 cut(s)	125, 515
BssECI	CCNNGG	7 cut(s)	150, 173, 283, 317, 567, 774, 775
BssMI	GATC	4 cut(s)	117, 822, 871, 1037
BssSI	CACGAG	1 cut(s)	1033
BssT1I	CCWWGG	1 cut(s)	150
Bst2BI	CACGAG	1 cut(s)	1033
Bst2UI	CCWGG	6 cut(s)	174, 568, 716, 776, 944, 1011
Bst4CI	ACNGT	2 cut(s)	106, 1255
BstAFI	CTTAAG	2 cut(s)	580, 875
BstAUI	TGTACA	1 cut(s)	369
BstBAI	YACGTR	1 cut(s)	1308
BstC8I	GCNNGC	7 cut(s)	70, 140, 189, 294, 414, 696, 1216
BstDEI	CTNAG	5 cut(s)	134, 160, 548, 1022, 1163
BstDSI	CCRYGG	2 cut(s)	150, 317
BstEII	GGTNACC	1 cut(s)	376
BstF5I	GGATG	4 cut(s)	170, 362, 987, 1191
BstFNI	CGCG	1 cut(s)	614
BstKTI	GATC	4 cut(s)	120, 825, 874, 1040
BstMAI	GTCTC	1 cut(s)	1086
BstMBI	GATC	4 cut(s)	117, 822, 871, 1037
BstMCI	CGRYCG	1 cut(s)	271
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 695, 779, 1049
BstNI	CCWGG	6 cut(s)	174, 568, 716, 776, 944, 1011
BstNSI	RCATGY	5 cut(s)	296, 420, 646, 698, 973
BstPI	GGTNACC	1 cut(s)	376
BstSCI	CCNGG	9 cut(s)	172, 253, 566, 689, 714, 774, 810, 942, 1009
BstSFI	CTRYAG	2 cut(s)	561, 633
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	1 cut(s)	614
BstV1I	GCAGC	5 cut(s)	542, 545, 886, 889, 948
BstX2I	RGATCY	1 cut(s)	871
BstXI	CCANNNNNNTGG	1 cut(s)	932
BstYI	RGATCY	1 cut(s)	871
BsuRI	GGCC	3 cut(s)	316, 719, 818
BtgI	CCRYGG	2 cut(s)	150, 317
BtsCI	GGATG	4 cut(s)	170, 362, 987, 1191
BtsI	GCAGTG	1 cut(s)	705
BtsIMutI	CAGTG	2 cut(s)	63, 705
BveI	ACCTGC	3 cut(s)	340, 563, 892
Cac8I	GCNNGC	7 cut(s)	70, 140, 189, 294, 414, 696, 1216
Cfr10I	RCCGGY	2 cut(s)	125, 515
Cfr13I	GGNCC	4 cut(s)	170, 302, 314, 817
CseI	GACGC	1 cut(s)	712
CsiI	ACCWGGT	1 cut(s)	942
Csp6I	GTAC	6 cut(s)	88, 131, 370, 448, 616, 829
CviQI	GTAC	6 cut(s)	88, 131, 370, 448, 616, 829
DdeI	CTNAG	5 cut(s)	134, 160, 548, 1022, 1163
DpnI	GATC	4 cut(s)	119, 824, 873, 1039
DpnII	GATC	4 cut(s)	117, 822, 871, 1037
DraIII	CACNNNGTG	1 cut(s)	222
Eco130I	CCWWGG	1 cut(s)	150
Eco31I	GGTCTC	1 cut(s)	1086
Eco47I	GGWCC	2 cut(s)	170, 302
Eco57I	CTGAAG	1 cut(s)	416
Eco88I	CYCGRG	3 cut(s)	284, 311, 737
Eco91I	GGTNACC	1 cut(s)	376
EcoO65I	GGTNACC	1 cut(s)	376
EcoRI	GAATTC	1 cut(s)	753
EcoRII	CCWGG	6 cut(s)	172, 566, 714, 774, 942, 1009
EcoT14I	CCWWGG	1 cut(s)	150
EcoT22I	ATGCAT	2 cut(s)	664, 1288
ErhI	CCWWGG	1 cut(s)	150
FaqI	GGGAC	1 cut(s)	190
FauI	CCCGC	1 cut(s)	77
Fnu4HI	GCNGC	6 cut(s)	290, 531, 534, 900, 903, 937
FokI	GGATG	4 cut(s)	177, 369, 994, 1178
Fsp4HI	GCNGC	6 cut(s)	290, 531, 534, 900, 903, 937
FspBI	CTAG	1 cut(s)	527
GluI	GCNGC	6 cut(s)	290, 531, 534, 900, 903, 937
GsaI	CCCAGC	1 cut(s)	493
HaeIII	GGCC	3 cut(s)	316, 719, 818
HapII	CCGG	6 cut(s)	126, 254, 381, 516, 690, 812
HgaI	GACGC	1 cut(s)	712
HincII	GTYRAC	1 cut(s)	1207
HindII	GTYRAC	1 cut(s)	1207
HinfI	GANTC	6 cut(s)	232, 264, 454, 733, 1071, 1185
HpaII	CCGG	6 cut(s)	126, 254, 381, 516, 690, 812
HphI	GGTGA	3 cut(s)	100, 370, 1066
Hpy166II	GTNNAC	5 cut(s)	61, 131, 370, 1000, 1207
Hpy188I	TCNGA	3 cut(s)	34, 396, 594
Hpy188III	TCNNGA	4 cut(s)	737, 750, 845, 1033
Hpy8I	GTNNAC	5 cut(s)	61, 131, 370, 1000, 1207
Hpy99I	CGWCG	1 cut(s)	751
HpyAV	CCTTC	3 cut(s)	482, 1087, 1106
HpyCH4III	ACNGT	2 cut(s)	106, 1255
HpyCH4IV	ACGT	3 cut(s)	603, 861, 1307
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 695, 779, 1049
HpyF3I	CTNAG	5 cut(s)	134, 160, 548, 1022, 1163
HpySE526I	ACGT	3 cut(s)	603, 861, 1307
Kzo9I	GATC	4 cut(s)	117, 822, 871, 1037
LmnI	GCTCC	5 cut(s)	52, 243, 409, 498, 779
Lsp1109I	GCAGC	5 cut(s)	542, 545, 886, 889, 948
LweI	GCATC	3 cut(s)	1200, 1273, 1295
MabI	ACCWGGT	1 cut(s)	942
MaeI	CTAG	1 cut(s)	527
MaeII	ACGT	3 cut(s)	603, 861, 1307
MaeIII	GTNAC	5 cut(s)	106, 359, 376, 700, 1072
MalI	GATC	4 cut(s)	119, 824, 873, 1039
MboI	GATC	4 cut(s)	117, 822, 871, 1037
MboII	GAAGA	2 cut(s)	409, 1136
MfeI	CAATTG	1 cut(s)	424
MflI	RGATCY	1 cut(s)	871
MhlI	GDGCHC	2 cut(s)	775, 867
MluCI	AATT	7 cut(s)	424, 499, 723, 753, 798, 1014, 1167
MluI	ACGCGT	1 cut(s)	612
MlyI	GAGTC	2 cut(s)	727, 1080
MmeI	TCCRAC	2 cut(s)	334, 572
MnlI	CCTC	5 cut(s)	39, 43, 293, 377, 972
Mph1103I	ATGCAT	2 cut(s)	664, 1288
MroXI	GAANNNNTTC	1 cut(s)	249
MseI	TTAA	3 cut(s)	581, 876, 1170
MslI	CAYNNNNRTG	3 cut(s)	113, 246, 1229
MspCI	CTTAAG	2 cut(s)	580, 875
MspI	CCGG	6 cut(s)	126, 254, 381, 516, 690, 812
MspR9I	CCNGG	9 cut(s)	174, 255, 568, 691, 716, 776, 812, 944, 1011
MunI	CAATTG	1 cut(s)	424
MvaI	CCWGG	6 cut(s)	174, 568, 716, 776, 944, 1011
MvnI	CGCG	1 cut(s)	614
MwoI	GCNNNNNNNGC	4 cut(s)	74, 695, 779, 1049
NciI	CCSGG	3 cut(s)	255, 691, 812
NcoI	CCATGG	1 cut(s)	150
NdeII	GATC	4 cut(s)	117, 822, 871, 1037
NlaIV	GGNNCC	6 cut(s)	54, 124, 171, 469, 772, 781
NmeAIII	GCCGAG	1 cut(s)	98
NmuCI	GTSAC	5 cut(s)	106, 359, 376, 700, 1072
NsiI	ATGCAT	2 cut(s)	664, 1288
NspI	RCATGY	5 cut(s)	296, 420, 646, 698, 973
PaeI	GCATGC	2 cut(s)	296, 698
PasI	CCCWGGG	1 cut(s)	775
PciI	ACATGT	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	2 cut(s)	268, 858
PdmI	GAANNNNTTC	1 cut(s)	249
PfeI	GAWTC	4 cut(s)	232, 264, 454, 1185
PflMI	CCANNNNNTGG	1 cut(s)	84
PfoI	TCCNGGA	1 cut(s)	253
PkrI	GCNGC	6 cut(s)	291, 532, 535, 901, 904, 938
PleI	GAGTC	2 cut(s)	727, 1079
PpsI	GAGTC	2 cut(s)	727, 1079
Ppu21I	YACGTR	1 cut(s)	1308
PscI	ACATGT	1 cut(s)	642
Psp6I	CCWGG	6 cut(s)	172, 566, 714, 774, 942, 1009
PspEI	GGTNACC	1 cut(s)	376
PspFI	CCCAGC	1 cut(s)	489
PspGI	CCWGG	6 cut(s)	172, 566, 714, 774, 942, 1009
PspN4I	GGNNCC	6 cut(s)	54, 124, 171, 469, 772, 781
PspPI	GGNCC	4 cut(s)	170, 302, 314, 817
PstI	CTGCAG	1 cut(s)	637
PsuI	RGATCY	1 cut(s)	871
RsaI	GTAC	6 cut(s)	89, 132, 371, 449, 617, 830
RsaNI	GTAC	6 cut(s)	88, 131, 370, 448, 616, 829
RseI	CAYNNNNRTG	3 cut(s)	113, 246, 1229
SaqAI	TTAA	3 cut(s)	581, 876, 1170
SatI	GCNGC	6 cut(s)	290, 531, 534, 900, 903, 937
Sau3AI	GATC	4 cut(s)	117, 822, 871, 1037
Sau96I	GGNCC	4 cut(s)	170, 302, 314, 817
SchI	GAGTC	2 cut(s)	727, 1080
ScrFI	CCNGG	9 cut(s)	174, 255, 568, 691, 716, 776, 812, 944, 1011
SduI	GDGCHC	2 cut(s)	775, 867
SexAI	ACCWGGT	1 cut(s)	942
SfaNI	GCATC	3 cut(s)	1200, 1273, 1295
SfcI	CTRYAG	2 cut(s)	561, 633
SinI	GGWCC	2 cut(s)	170, 302
SmiMI	CAYNNNNRTG	3 cut(s)	113, 246, 1229
SmlI	CTYRAG	3 cut(s)	580, 875, 974
SmoI	CTYRAG	3 cut(s)	580, 875, 974
SphI	GCATGC	2 cut(s)	296, 698
Sse9I	AATT	7 cut(s)	424, 499, 723, 753, 798, 1014, 1167
SsiI	CCGC	4 cut(s)	70, 111, 289, 332
SspMI	CTAG	1 cut(s)	527
StyD4I	CCNGG	9 cut(s)	172, 253, 566, 689, 714, 774, 810, 942, 1009
StyI	CCWWGG	1 cut(s)	150
TaaI	ACNGT	2 cut(s)	106, 1255
TaiI	ACGT	3 cut(s)	606, 864, 1310
TaqI	TCGA	5 cut(s)	262, 267, 731, 749, 852
TaqII	GACCGA	1 cut(s)	285
TasI	AATT	7 cut(s)	424, 499, 723, 753, 798, 1014, 1167
TatI	WGTACW	2 cut(s)	130, 369
TauI	GCSGC	1 cut(s)	292
TfiI	GAWTC	4 cut(s)	232, 264, 454, 1185
Tru1I	TTAA	3 cut(s)	581, 876, 1170
Tru9I	TTAA	3 cut(s)	581, 876, 1170
TscAI	CASTG	2 cut(s)	63, 705
TseFI	GTSAC	5 cut(s)	106, 359, 376, 700, 1072
TseI	GCWGC	5 cut(s)	530, 533, 899, 902, 936
Tsp45I	GTSAC	5 cut(s)	106, 359, 376, 700, 1072
TspDTI	ATGAA	6 cut(s)	258, 464, 1004, 1125, 1213, 1225
TspRI	CASTG	2 cut(s)	63, 705
Van91I	CCANNNNNTGG	1 cut(s)	84
Vha464I	CTTAAG	2 cut(s)	580, 875
VpaK11BI	GGWCC	2 cut(s)	170, 302
XapI	RAATTY	1 cut(s)	753
XceI	RCATGY	5 cut(s)	296, 420, 646, 698, 973
XmnI	GAANNNNTTC	1 cut(s)	249
XspI	CTAG	1 cut(s)	527
Zsp2I	ATGCAT	2 cut(s)	664, 1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.