pycom13g03990

Lysine histidine

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
2632012 .. 2634594
2583 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03990.3

Sequence Viewer

Length: 1161 bp
ATGGTTACAATTTCTCCTCCAAAGGAAGTTGTTGCGGACAACAAATGGAGGGAGGAGCCAGTGGACAACGCCCGCCGAGCCAAATGGTGGTACTCCACCTTTCACACCGTCACCGCCATGATCGGTGCCGGTGTACTCAGCCTGCCTTATGCCATGGCATACTTAGGATGGGGTCCAGGGACAATGGTGCTGGCAATATCGTGGTGCATGACCTTGAACACAATGTGGCAGATGATTCAGCTCCATGAATGTGTTCCTGGAACTCGATTCGACCGATATATAGACCTCGGCCGGCATGCCTTTGGACCAAAGCTCGGGCCGTGGATTGTGCTTCCGCAACAACTGATCGTGCAGGTTGGATGTGACATAGTGTACATGGTCACCGGAGGAAAGTGTCTGAAGAAGTTTGTGGAGATGGCATGTGCCAATTGCACACCAGTCAAGCAATCGTACTGGATTCTCATCTTTGGTTCCCTTCATTTCTTTCTTTCCCAGCTCCCCAATTTCAACTCTGTTGCCGGTGTTTCTCTAGCAGCAGCCATCATGTCACTAAGTTATTCAACTATAGCCTGGGCAGGTTGCTTAAGCAAAGGTCGGATTGAAGACGTGAGCTATGCGTACAAGAAAACAAGCCCTGCAGATTACATGTTTAGGGTTTTCAATGCATTAGGTCAAATCTCCTTTGCATTTGCCGGGCATGCAGTGGCGCTTGAAATCCAGGCCACAATTCCATCGACTCCCGAGAAGCCGTCGAGAATTCCCATGTGGAAAGGTGCCCTAGGAGCCTACTTTATCAACGCAATTTGCTATTTCCCGGTGGCCTTGATCGGGTACTGGGCTTTTGGTCAAGATGTCGATGATAACGTGTTGATCGATCTTAAGAAACCTGCATGGCTCATTGCTGCTGCTAACCTAATGGTTGTCGTCCATGTCATTGGCAGCTACCAGGTTTATGCTATGCCTGTTTTTGACATGCTTGAGAGGATGATGATGAAAAAAGTAAACTTCCCACCTGGAATTGCACTTAGACTAATCACGATCGATCAGCTTATGTTGCATTTACATTATTTATTGGAGTCACCTTCCCTTTCTTTGGAGACCTTCTTGGTTTCTTTGGTGGATTTGGTTTTGCCCCCACTTCATACTTTCTTCCTTGTATAA

Protein Analysis

387

Amino Acids

43.13

Weight (kDa)

8.33

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011639)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 343, 566, 895
AccB1I GGYRCC 2 cut(s) 125, 773
AccB7I CCANNNNNTGG 1 cut(s) 87
AciI CCGC 4 cut(s) 35, 73, 114, 335
AcoI YGGCCR 1 cut(s) 289
AcsI RAATTY 1 cut(s) 756
AcuI CTGAAG 1 cut(s) 419
AdeI CACNNNGTG 1 cut(s) 225
AfaI GTAC 6 cut(s) 92, 135, 374, 452, 620, 833
AfiI CCNNNNNNNGG 4 cut(s) 87, 314, 828, 1093
AflII CTTAAG 2 cut(s) 583, 878
AflIII ACRYGT 2 cut(s) 645, 864
AgsI TTSAA 6 cut(s) 217, 508, 561, 602, 661, 713
AjiI CACGTC 1 cut(s) 607
AjnI CCWGG 6 cut(s) 175, 256, 569, 717, 945, 1012
AluBI AGCT 6 cut(s) 241, 313, 496, 612, 942, 1048
AluI AGCT 6 cut(s) 241, 313, 496, 612, 942, 1048
Alw26I GTCTC 1 cut(s) 1091
Ama87I CYCGRG 2 cut(s) 314, 740
AoxI GGCC 4 cut(s) 289, 317, 720, 819
ApeKI GCWGC 5 cut(s) 533, 536, 902, 905, 939
ApoI RAATTY 1 cut(s) 756
Asp700I GAANNNNTTC 1 cut(s) 252
AspA2I CCTAGG 1 cut(s) 778
AspLEI GCGC 1 cut(s) 709
AspS9I GGNCC 3 cut(s) 173, 305, 317
AsuC2I CCSGG 2 cut(s) 694, 815
AsuHPI GGTGA 3 cut(s) 103, 373, 1071
AvaI CYCGRG 2 cut(s) 314, 740
AvaII GGWCC 2 cut(s) 173, 305
AvrII CCTAGG 1 cut(s) 778
BaeGI GKGCMC 1 cut(s) 778
BanI GGYRCC 2 cut(s) 125, 773
BbsI GAAGAC 1 cut(s) 609
BbvI GCAGC 5 cut(s) 545, 548, 889, 892, 951
BccI CCATC 4 cut(s) 162, 409, 548, 739
BceAI ACGGC 2 cut(s) 304, 733
BciT130I CCWGG 6 cut(s) 177, 258, 571, 719, 947, 1014
BcnI CCSGG 2 cut(s) 694, 815
BcoDI GTCTC 1 cut(s) 1091
BfaI CTAG 2 cut(s) 530, 779
BfmI CTRYAG 2 cut(s) 564, 636
BfoI RGCGCY 1 cut(s) 710
BfrI CTTAAG 2 cut(s) 583, 878
BfuAI ACCTGC 3 cut(s) 343, 566, 895
BisI GCNGC 5 cut(s) 534, 537, 903, 906, 940
BlnI CCTAGG 1 cut(s) 778
BlsI GCNGC 5 cut(s) 535, 538, 904, 907, 941
Bme1390I CCNGG 8 cut(s) 177, 258, 571, 694, 719, 815, 947, 1014
Bme18I GGWCC 2 cut(s) 173, 305
BmeT110I CYCGRG 2 cut(s) 314, 740
BmgBI CACGTC 1 cut(s) 607
BmgT120I GGNCC 3 cut(s) 173, 305, 317
BmiI GGNNCC 6 cut(s) 57, 127, 174, 472, 775, 784
BmrFI CCNGG 8 cut(s) 177, 258, 571, 694, 719, 815, 947, 1014
BmrI ACTGGG 1 cut(s) 844
BmuI ACTGGG 1 cut(s) 844
BpiI GAAGAC 1 cut(s) 609
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 2 cut(s) 694, 815
Bsa29I ATCGAT 2 cut(s) 873, 1041
BsaBI GATNNNNATC 1 cut(s) 461
BsaI GGTCTC 1 cut(s) 1091
BsaJI CCNNGG 6 cut(s) 153, 176, 286, 320, 570, 778
BsaWI WCCGGW 1 cut(s) 383
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bsc4I CCNNNNNNNGG 4 cut(s) 87, 314, 828, 1093
Bse118I RCCGGY 3 cut(s) 128, 291, 518
Bse1I ACTGG 4 cut(s) 59, 437, 458, 839
Bse3DI GCAATG 1 cut(s) 897
Bse8I GATNNNNATC 1 cut(s) 461
BseBI CCWGG 6 cut(s) 177, 258, 571, 719, 947, 1014
BseCI ATCGAT 2 cut(s) 873, 1041
BseDI CCNNGG 6 cut(s) 153, 176, 286, 320, 570, 778
BseGI GGATG 3 cut(s) 173, 365, 990
BseJI GATNNNNATC 1 cut(s) 461
BseLI CCNNNNNNNGG 4 cut(s) 87, 314, 828, 1093
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 1 cut(s) 151
BseNI ACTGG 4 cut(s) 59, 437, 458, 839
BseRI GAGGAG 2 cut(s) 6, 68
BseSI GKGCMC 1 cut(s) 778
BseX3I CGGCCG 1 cut(s) 289
BseXI GCAGC 5 cut(s) 545, 548, 889, 892, 951
BseYI CCCAGC 1 cut(s) 492
BsgI GTGCAG 1 cut(s) 371
Bsh1285I CGRYCG 3 cut(s) 274, 292, 1041
BshFI GGCC 4 cut(s) 291, 319, 722, 821
BshNI GGYRCC 2 cut(s) 125, 773
BshVI ATCGAT 2 cut(s) 873, 1041
BsiEI CGRYCG 3 cut(s) 274, 292, 1041
BsiHKCI CYCGRG 2 cut(s) 314, 740
BsiSI CCGG 6 cut(s) 129, 292, 384, 519, 693, 815
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 4 cut(s) 87, 314, 828, 1093
BsmAI GTCTC 1 cut(s) 1091
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 4 cut(s) 291, 319, 722, 821
Bso31I GGTCTC 1 cut(s) 1091
BsoBI CYCGRG 2 cut(s) 314, 740
Bsp1286I GDGCHC 1 cut(s) 778
Bsp1407I TGTACA 1 cut(s) 372
Bsp143I GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 4 cut(s) 35, 73, 114, 335
BspANI GGCC 4 cut(s) 291, 319, 722, 821
BspCNI CTCAG 1 cut(s) 150
BspDI ATCGAT 2 cut(s) 873, 1041
BspLI GGNNCC 6 cut(s) 57, 127, 174, 472, 775, 784
BspMAI CTGCAG 1 cut(s) 640
BspMI ACCTGC 3 cut(s) 343, 566, 895
BspT107I GGYRCC 2 cut(s) 125, 773
BspTI CTTAAG 2 cut(s) 583, 878
BspTNI GGTCTC 1 cut(s) 1091
BsrDI GCAATG 1 cut(s) 897
BsrFI RCCGGY 3 cut(s) 128, 291, 518
BsrGI TGTACA 1 cut(s) 372
BsrI ACTGG 4 cut(s) 59, 437, 458, 839
BssAI RCCGGY 3 cut(s) 128, 291, 518
BssECI CCNNGG 6 cut(s) 153, 176, 286, 320, 570, 778
BssMI GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
BssT1I CCWWGG 2 cut(s) 153, 778
Bst2UI CCWGG 6 cut(s) 177, 258, 571, 719, 947, 1014
Bst4CI ACNGT 1 cut(s) 109
BstAFI CTTAAG 2 cut(s) 583, 878
BstAUI TGTACA 1 cut(s) 372
BstC8I GCNNGC 6 cut(s) 73, 143, 192, 293, 297, 699
BstDEI CTNAG 4 cut(s) 137, 163, 551, 1025
BstDSI CCRYGG 2 cut(s) 153, 320
BstEII GGTNACC 1 cut(s) 379
BstF5I GGATG 3 cut(s) 173, 365, 990
BstH2I RGCGCY 1 cut(s) 710
BstHHI GCGC 1 cut(s) 709
BstKTI GATC 7 cut(s) 123, 348, 828, 873, 877, 1041, 1045
BstMAI GTCTC 1 cut(s) 1091
BstMBI GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
BstMCI CGRYCG 3 cut(s) 274, 292, 1041
BstMWI GCNNNNNNNGC 4 cut(s) 77, 698, 782, 1054
BstNI CCWGG 6 cut(s) 177, 258, 571, 719, 947, 1014
BstNSI RCATGY 5 cut(s) 299, 423, 649, 701, 976
BstPI GGTNACC 1 cut(s) 379
BstSCI CCNGG 8 cut(s) 175, 256, 569, 692, 717, 813, 945, 1012
BstSFI CTRYAG 2 cut(s) 564, 636
BstSLI GKGCMC 1 cut(s) 778
BstV1I GCAGC 5 cut(s) 545, 548, 889, 892, 951
BstV2I GAAGAC 1 cut(s) 609
BstXI CCANNNNNNTGG 1 cut(s) 935
BstZI CGGCCG 1 cut(s) 289
Bsu15I ATCGAT 2 cut(s) 873, 1041
BsuRI GGCC 4 cut(s) 291, 319, 722, 821
BsuTUI ATCGAT 2 cut(s) 873, 1041
BtgI CCRYGG 2 cut(s) 153, 320
BtrI CACGTC 1 cut(s) 607
BtsCI GGATG 3 cut(s) 173, 365, 990
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 2 cut(s) 66, 708
BveI ACCTGC 3 cut(s) 343, 566, 895
Cac8I GCNNGC 6 cut(s) 73, 143, 192, 293, 297, 699
CfoI GCGC 1 cut(s) 709
Cfr10I RCCGGY 3 cut(s) 128, 291, 518
Cfr13I GGNCC 3 cut(s) 173, 305, 317
ClaI ATCGAT 2 cut(s) 873, 1041
CsiI ACCWGGT 1 cut(s) 945
Csp6I GTAC 6 cut(s) 91, 134, 373, 451, 619, 832
CviQI GTAC 6 cut(s) 91, 134, 373, 451, 619, 832
DdeI CTNAG 4 cut(s) 137, 163, 551, 1025
DpnI GATC 7 cut(s) 122, 347, 827, 872, 876, 1040, 1044
DpnII GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
DraIII CACNNNGTG 1 cut(s) 225
EaeI YGGCCR 1 cut(s) 289
EagI CGGCCG 1 cut(s) 289
EclXI CGGCCG 1 cut(s) 289
Eco130I CCWWGG 2 cut(s) 153, 778
Eco31I GGTCTC 1 cut(s) 1091
Eco47I GGWCC 2 cut(s) 173, 305
Eco52I CGGCCG 1 cut(s) 289
Eco57I CTGAAG 1 cut(s) 419
Eco88I CYCGRG 2 cut(s) 314, 740
Eco91I GGTNACC 1 cut(s) 379
EcoO65I GGTNACC 1 cut(s) 379
EcoRI GAATTC 1 cut(s) 756
EcoRII CCWGG 6 cut(s) 175, 256, 569, 717, 945, 1012
EcoT14I CCWWGG 2 cut(s) 153, 778
EcoT22I ATGCAT 1 cut(s) 667
ErhI CCWWGG 2 cut(s) 153, 778
FaqI GGGAC 1 cut(s) 193
FauI CCCGC 1 cut(s) 80
Fnu4HI GCNGC 5 cut(s) 534, 537, 903, 906, 940
FokI GGATG 3 cut(s) 180, 372, 997
Fsp4HI GCNGC 5 cut(s) 534, 537, 903, 906, 940
FspBI CTAG 2 cut(s) 530, 779
GlaI GCGC 1 cut(s) 708
GluI GCNGC 5 cut(s) 534, 537, 903, 906, 940
GsaI CCCAGC 1 cut(s) 496
HaeII RGCGCY 1 cut(s) 710
HaeIII GGCC 4 cut(s) 291, 319, 722, 821
HapII CCGG 6 cut(s) 129, 292, 384, 519, 693, 815
HhaI GCGC 1 cut(s) 709
Hin6I GCGC 1 cut(s) 707
HinP1I GCGC 1 cut(s) 707
HinfI GANTC 5 cut(s) 235, 267, 457, 736, 1076
HpaII CCGG 6 cut(s) 129, 292, 384, 519, 693, 815
HphI GGTGA 3 cut(s) 103, 373, 1071
Hpy166II GTNNAC 4 cut(s) 64, 134, 373, 1003
Hpy188I TCNGA 2 cut(s) 399, 597
Hpy188III TCNNGA 4 cut(s) 740, 753, 848, 1036
Hpy8I GTNNAC 4 cut(s) 64, 134, 373, 1003
Hpy99I CGWCG 1 cut(s) 754
HpyAV CCTTC 3 cut(s) 485, 1092, 1111
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4IV ACGT 2 cut(s) 606, 864
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 698, 782, 1054
HpyF3I CTNAG 4 cut(s) 137, 163, 551, 1025
HpySE526I ACGT 2 cut(s) 606, 864
HspAI GCGC 1 cut(s) 707
KroI GCCGGC 1 cut(s) 291
KroNI GCCGGC 1 cut(s) 293
Kzo9I GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
LmnI GCTCC 4 cut(s) 55, 246, 501, 782
Lsp1109I GCAGC 5 cut(s) 545, 548, 889, 892, 951
MabI ACCWGGT 1 cut(s) 945
MaeI CTAG 2 cut(s) 530, 779
MaeII ACGT 2 cut(s) 606, 864
MaeIII GTNAC 6 cut(s) 4, 109, 362, 379, 546, 1077
MalI GATC 7 cut(s) 122, 347, 827, 872, 876, 1040, 1044
MboI GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
MboII GAAGA 3 cut(s) 412, 614, 1141
MfeI CAATTG 1 cut(s) 427
MhlI GDGCHC 1 cut(s) 778
MluCI AATT 7 cut(s) 9, 427, 502, 726, 756, 801, 1017
MlyI GAGTC 2 cut(s) 730, 1085
MmeI TCCRAC 2 cut(s) 337, 575
MnlI CCTC 6 cut(s) 27, 42, 46, 296, 380, 975
Mph1103I ATGCAT 1 cut(s) 667
MroNI GCCGGC 1 cut(s) 291
MroXI GAANNNNTTC 1 cut(s) 252
MseI TTAA 2 cut(s) 584, 879
MslI CAYNNNNRTG 2 cut(s) 116, 249
MspCI CTTAAG 2 cut(s) 583, 878
MspI CCGG 6 cut(s) 129, 292, 384, 519, 693, 815
MspR9I CCNGG 8 cut(s) 177, 258, 571, 694, 719, 815, 947, 1014
MunI CAATTG 1 cut(s) 427
MvaI CCWGG 6 cut(s) 177, 258, 571, 719, 947, 1014
MwoI GCNNNNNNNGC 4 cut(s) 77, 698, 782, 1054
NaeI GCCGGC 1 cut(s) 293
NciI CCSGG 2 cut(s) 694, 815
NcoI CCATGG 1 cut(s) 153
NdeII GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
NgoMIV GCCGGC 1 cut(s) 291
NlaIV GGNNCC 6 cut(s) 57, 127, 174, 472, 775, 784
NmeAIII GCCGAG 2 cut(s) 101, 267
NmuCI GTSAC 5 cut(s) 109, 362, 379, 546, 1077
NsiI ATGCAT 1 cut(s) 667
NspI RCATGY 5 cut(s) 299, 423, 649, 701, 976
PaeI GCATGC 2 cut(s) 299, 701
PciI ACATGT 1 cut(s) 645
PcsI WCGNNNNNNNCGW 3 cut(s) 271, 861, 870
PdiI GCCGGC 1 cut(s) 293
PdmI GAANNNNTTC 1 cut(s) 252
PfeI GAWTC 3 cut(s) 235, 267, 457
PflMI CCANNNNNTGG 1 cut(s) 87
PfoI TCCNGGA 1 cut(s) 256
PkrI GCNGC 5 cut(s) 535, 538, 904, 907, 941
Ple19I CGATCG 1 cut(s) 1041
PleI GAGTC 2 cut(s) 730, 1084
PpsI GAGTC 2 cut(s) 730, 1084
PscI ACATGT 1 cut(s) 645
Psp6I CCWGG 6 cut(s) 175, 256, 569, 717, 945, 1012
PspEI GGTNACC 1 cut(s) 379
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 6 cut(s) 175, 256, 569, 717, 945, 1012
PspN4I GGNNCC 6 cut(s) 57, 127, 174, 472, 775, 784
PspPI GGNCC 3 cut(s) 173, 305, 317
PstI CTGCAG 1 cut(s) 640
PvuI CGATCG 1 cut(s) 1041
RsaI GTAC 6 cut(s) 92, 135, 374, 452, 620, 833
RsaNI GTAC 6 cut(s) 91, 134, 373, 451, 619, 832
RseI CAYNNNNRTG 2 cut(s) 116, 249
SaqAI TTAA 2 cut(s) 584, 879
SatI GCNGC 5 cut(s) 534, 537, 903, 906, 940
Sau3AI GATC 7 cut(s) 120, 345, 825, 870, 874, 1038, 1042
Sau96I GGNCC 3 cut(s) 173, 305, 317
SchI GAGTC 2 cut(s) 730, 1085
ScrFI CCNGG 8 cut(s) 177, 258, 571, 694, 719, 815, 947, 1014
SduI GDGCHC 1 cut(s) 778
SexAI ACCWGGT 1 cut(s) 945
SfcI CTRYAG 2 cut(s) 564, 636
SinI GGWCC 2 cut(s) 173, 305
SmiMI CAYNNNNRTG 2 cut(s) 116, 249
SmlI CTYRAG 3 cut(s) 583, 878, 977
SmoI CTYRAG 3 cut(s) 583, 878, 977
SphI GCATGC 2 cut(s) 299, 701
Sse9I AATT 7 cut(s) 9, 427, 502, 726, 756, 801, 1017
SsiI CCGC 4 cut(s) 35, 73, 114, 335
SspMI CTAG 2 cut(s) 530, 779
StyD4I CCNGG 8 cut(s) 175, 256, 569, 692, 717, 813, 945, 1012
StyI CCWWGG 2 cut(s) 153, 778
TaaI ACNGT 1 cut(s) 109
TaiI ACGT 2 cut(s) 609, 867
TaqI TCGA 7 cut(s) 265, 270, 734, 752, 855, 873, 1041
TaqII GACCGA 1 cut(s) 288
TasI AATT 7 cut(s) 9, 427, 502, 726, 756, 801, 1017
TatI WGTACW 2 cut(s) 133, 372
TfiI GAWTC 3 cut(s) 235, 267, 457
Tru1I TTAA 2 cut(s) 584, 879
Tru9I TTAA 2 cut(s) 584, 879
TscAI CASTG 2 cut(s) 66, 708
TseFI GTSAC 5 cut(s) 109, 362, 379, 546, 1077
TseI GCWGC 5 cut(s) 533, 536, 902, 905, 939
Tsp45I GTSAC 5 cut(s) 109, 362, 379, 546, 1077
TspDTI ATGAA 4 cut(s) 261, 467, 1007, 1130
TspRI CASTG 2 cut(s) 66, 708
Van91I CCANNNNNTGG 1 cut(s) 87
Vha464I CTTAAG 2 cut(s) 583, 878
VpaK11BI GGWCC 2 cut(s) 173, 305
XapI RAATTY 1 cut(s) 756
XceI RCATGY 5 cut(s) 299, 423, 649, 701, 976
XmaJI CCTAGG 1 cut(s) 778
XmnI GAANNNNTTC 1 cut(s) 252
XspI CTAG 2 cut(s) 530, 779
Zsp2I ATGCAT 1 cut(s) 667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.