Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005612

Physical Location & Seq

Genomic Coordinates Reverse (-)

37994529 .. 38009507

Gene Structure 14979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1275700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGACTCGGAGGACGATATGCATGATGCCAACGACGTCGAGTCCATGGACGACGACGACGGCTTCTACAGCGACGAGGATGCCTTGGACTACTACGGTACTGACGAAGACGACGCTGATGTTGATTTCGGCGACGATAATGAGGGAATCGAGAGGATCGAGGCCAGTCGAGCTGAGAATAATTATATCGTCTTGAAGGAGTCAGATATAAAGCATTGCCAGGAAGATGATATTACAAGTGTATCTGCTGTGCTTTCCATATCAAGAGTTTCTTCAAGCATTCTACTTCATTACTATAATTGGAGTGTAAGTAAAGTGCACGAGGCATGGTTTGCCGATGAAGATAAAGTCCGAAAAACTGTTGGCTTGTTAAAGAAGCCAGTTGTTCAGTTCCCCCATTCCAGAGAACTTACCTGTGGGATCTGTTTTGAAGCTTGTCCCCATGGTAGCATCAAATCGGCTGCTTGTGGTCATCCTTACTGTTGTACATGCTGGAAAGGATACATTGGAACATCCATTAGCGATGGTCCTGGTTGTTTGACACTGAGATGTCCTGATCCGTCTTGTGGTGCGTCTCTTGGTCAAGACATGATTAGTGTGTTGGTCAGTGATGAAGATAACCAGAAGTACTCTCGGTACCTTCTTAGGTCTTATATTGAAGACAACAAGAAGACAAAGTGGTGTCCTGCTCCGGGTTGTGAATATGCTGTTAATTTTGTTGGTGATAATGAAAATTATGATGTTTCTTGCCTCTGCTCCCATGGATTTTGCTGGAATTGTACAGAGGAAGCTCATCGTCCTGTCGATTGTAGCACTGTGGAGAAATGGATTTTAAAGAACAGTGCTGAGTCTGAAAACATGAACTGGATACTAGCCAATTCTAAGCCATGTCCAAAGTGCAAGCGGCCTATAGAAAAAAACCAAGGGTGCATGCACATGACATGCACACCACCTTGCAAGTTTGAATTTTGCTGGCTGTGCCTTGGTTCATGGGTGGAGCATGGTGAGAGGACGGGTGGTTTCTATGCTTGTAACCGCTATGAGGCAGCTAAGCAAGAGGGTGCTTATGATGAAGCTGAGAGAAGAAGAGAGATGGCAAAGAATTCTCTGGAGAGATACACTCATTATTATGAACGTTGGGCAAGCAATCAGCAGTCAAGGCAAAAGGCTCTTGCGGATTTGCATCAGATGCGAACTGTGCATATGGAGAAACTTAGTGACATACAGCGTGAACCTGAGTCTCAGCTCAAGTTCTTAACTGACGCCTGGCTGCAGATTGTTGAGTGCAGAAGAGTACTAAAATGGACTTATGCTTATGGGTACTACCTGCCTGACCATGAGCAAGCGAAGAGGCAGTTTTTTGAGTACTTGCAAGGCGAGGCAGAGTCTGGTTTGGAAAGGCTTCATCAGTGTGCGGAGAAGGAGCTACTGCAATTCCTCAGTGCGGAAGGCCCATCGAAAGAATTCGTTGATTTCCATACAAAGCTAGCTGGACTTACCGGGGTGACTAAAAATTACTTCGAGAACCTGGTAAGGGCATTAGAGAATGGCCTATGTGATGTGGACTCTCAAGAAGCTTGCAGTGGGTCAACCAGCTCAAAAAATGGAGGAAGCAGCAAAGCAAAAGGTGGAAAGGGAAAGGGAACAGGTCAAGGTGGTGGGTCCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

557

Amino Acids

62.78

Weight (kDa)

5.05

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	74 - 111	1.4e-07	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	208 - 270	4.1e-16	IBR domain, a half RING-finger domain
IBR	PF01485	287 - 334	2.2e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	292 - 332	8.8e-15	IBR domain
IBR_2	PF22605	293 - 332	8.4e-13	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05890 AT1G05890 AT2G31510 AT2G31510 AT2G31510
fragaria_vesca	FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130
malus_domestica	MD04G1007200.v1.1 MD13G1275700.v1.1
prunus_persica	Prupe.1G191400_v2.0.a1
pyrus_communis	pycom04g03420 pycom13g28570
rosa_chinensis	RchiOBHm_Chr4g0407061
rosa_laevigata	RLG00000008740
rosa_multiflora	Rmu_sc0000600.1_g000003
rosa_roxburghii	Rroxscaffold_5G00351790
rosa_rugosa	Rorug04G0077500 Rorug04G0077600 Rorug04G0077700
rosa_samantha	Rh4AG142400 Rh4BG140100 Rh4CG148900 Rh4DG136500
rosa_wichuraiana	Rw4G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
Acc36I	ACCTGC	1 cut(s)	1335
Acc65I	GGTACC	1 cut(s)	636
AccB1I	GGYRCC	1 cut(s)	636
AciI	CCGC	5 cut(s)	904, 1036, 1175, 1415, 1445
AclI	AACGTT	1 cut(s)	1135
AclWI	GGATC	3 cut(s)	164, 428, 551
AcsI	RAATTY	3 cut(s)	965, 1102, 1463
AcyI	GRCGYC	2 cut(s)	36, 1263
AfaI	GTAC	8 cut(s)	100, 487, 629, 638, 781, 1296, 1322, 1367
AfiI	CCNNNNNNNGG	5 cut(s)	566, 692, 1042, 1444, 1534
AgsI	TTSAA	5 cut(s)	196, 276, 431, 659, 965
AhdI	GACNNNNNGTC	1 cut(s)	40
AjnI	CCWGG	5 cut(s)	219, 529, 1265, 1527, 1664
Alw21I	GWGCWC	1 cut(s)	321
Alw26I	GTCTC	2 cut(s)	579, 1245
Alw44I	GTGCAC	1 cut(s)	317
AlwI	GGATC	3 cut(s)	164, 428, 551
AlwNI	CAGNNNCTG	1 cut(s)	1388
AoxI	GGCC	4 cut(s)	162, 905, 1450, 1549
ApaLI	GTGCAC	1 cut(s)	317
ApeKI	GCWGC	4 cut(s)	461, 1046, 1270, 1614
ApoI	RAATTY	3 cut(s)	965, 1102, 1463
Asp700I	GAANNNNTTC	2 cut(s)	1401, 1463
Asp718I	GGTACC	1 cut(s)	636
AspS9I	GGNCC	3 cut(s)	527, 1451, 1662
AsuC2I	CCSGG	2 cut(s)	693, 1501
AsuHPI	GGTGA	3 cut(s)	734, 1016, 1516
AsuNHI	GCTAGC	1 cut(s)	1486
AvaII	GGWCC	2 cut(s)	527, 1662
BaeGI	GKGCMC	1 cut(s)	321
BaeI	ACNNNNGTAYC	2 cut(s)	225, 258
BanI	GGYRCC	1 cut(s)	636
BauI	CACGAG	1 cut(s)	320
BbsI	GAAGAC	3 cut(s)	114, 666, 677
Bbv12I	GWGCWC	1 cut(s)	321
BbvI	GCAGC	4 cut(s)	448, 1058, 1257, 1626
BccI	CCATC	3 cut(s)	518, 1087, 1462
BceAI	ACGGC	1 cut(s)	76
BcgI	CGANNNNNNTGC	2 cut(s)	62, 96
BciT130I	CCWGG	5 cut(s)	221, 531, 1267, 1529, 1666
BciVI	GTATCC	2 cut(s)	494, 861
BcnI	CCSGG	2 cut(s)	693, 1501
BcoDI	GTCTC	2 cut(s)	579, 1245
BfaI	CTAG	2 cut(s)	872, 1487
BfmI	CTRYAG	3 cut(s)	67, 909, 1271
BfuAI	ACCTGC	1 cut(s)	1335
BfuI	GTATCC	2 cut(s)	494, 861
BisI	GCNGC	5 cut(s)	462, 905, 1047, 1271, 1615
BlpI	GCTNAGC	1 cut(s)	1050
BlsI	GCNGC	5 cut(s)	463, 906, 1048, 1272, 1616
BmcAI	AGTACT	3 cut(s)	629, 1296, 1367
Bme1390I	CCNGG	7 cut(s)	221, 531, 693, 1267, 1501, 1529, 1666
Bme18I	GGWCC	2 cut(s)	527, 1662
BmeRI	GACNNNNNGTC	1 cut(s)	40
BmgT120I	GGNCC	3 cut(s)	527, 1451, 1662
BmiI	GGNNCC	2 cut(s)	638, 1663
BmrFI	CCNGG	7 cut(s)	221, 531, 693, 1267, 1501, 1529, 1666
BmsI	GCATC	5 cut(s)	16, 70, 459, 1179, 1192
BmtI	GCTAGC	1 cut(s)	1490
BpiI	GAAGAC	3 cut(s)	114, 666, 677
BplI	GAGNNNNNCTC	2 cut(s)	1105, 1137
BpmI	CTGGAG	1 cut(s)	1130
Bpu1102I	GCTNAGC	1 cut(s)	1050
BpuEI	CTTGAG	2 cut(s)	1232, 1554
BpuMI	CCSGG	2 cut(s)	693, 1501
BsaBI	GATNNNNATC	1 cut(s)	1182
BsaHI	GRCGYC	2 cut(s)	36, 1263
BsaJI	CCNNGG	7 cut(s)	45, 84, 442, 760, 922, 982, 1500
BsaXI	ACNNNNNCTCC	2 cut(s)	295, 325
Bsc4I	CCNNNNNNNGG	5 cut(s)	566, 692, 1042, 1444, 1534
Bse1I	ACTGG	3 cut(s)	165, 380, 869
Bse3DI	GCAATG	1 cut(s)	214
Bse8I	GATNNNNATC	1 cut(s)	1182
BseBI	CCWGG	5 cut(s)	221, 531, 1267, 1529, 1666
BseDI	CCNNGG	7 cut(s)	45, 84, 442, 760, 922, 982, 1500
BseGI	GGATG	3 cut(s)	85, 472, 512
BseJI	GATNNNNATC	1 cut(s)	1182
BseLI	CCNNNNNNNGG	5 cut(s)	566, 692, 1042, 1444, 1534
BseMI	GCAATG	1 cut(s)	214
BseMII	CTCAG	7 cut(s)	165, 536, 837, 1068, 1227, 1256, 1453
BseNI	ACTGG	3 cut(s)	165, 380, 869
BseSI	GKGCMC	1 cut(s)	321
BseXI	GCAGC	4 cut(s)	448, 1058, 1257, 1626
BsgI	GTGCAG	1 cut(s)	1306
BshFI	GGCC	4 cut(s)	164, 907, 1452, 1551
BshNI	GGYRCC	1 cut(s)	636
BsiHKAI	GWGCWC	1 cut(s)	321
BsiSI	CCGG	2 cut(s)	692, 1500
BslFI	GGGAC	1 cut(s)	423
BslI	CCNNNNNNNGG	5 cut(s)	566, 692, 1042, 1444, 1534
BsmAI	GTCTC	2 cut(s)	579, 1245
BsmBI	CGTCTC	1 cut(s)	579
BsmFI	GGGAC	1 cut(s)	423
BsmI	GAATGC	1 cut(s)	279
BsnI	GGCC	4 cut(s)	164, 907, 1452, 1551
Bsp1286I	GDGCHC	1 cut(s)	321
Bsp1407I	TGTACA	2 cut(s)	485, 779
Bsp143I	GATC	3 cut(s)	156, 420, 556
Bsp1720I	GCTNAGC	1 cut(s)	1050
Bsp19I	CCATGG	3 cut(s)	45, 442, 760
BspACI	CCGC	5 cut(s)	904, 1036, 1175, 1415, 1445
BspANI	GGCC	4 cut(s)	164, 907, 1452, 1551
BspCNI	CTCAG	7 cut(s)	166, 537, 838, 1069, 1228, 1255, 1452
BspLI	GGNNCC	2 cut(s)	638, 1663
BspMAI	CTGCAG	1 cut(s)	1275
BspMI	ACCTGC	1 cut(s)	1335
BspOI	GCTAGC	1 cut(s)	1490
BspPI	GGATC	3 cut(s)	164, 428, 551
BspT107I	GGYRCC	1 cut(s)	636
BsrDI	GCAATG	1 cut(s)	214
BsrGI	TGTACA	2 cut(s)	485, 779
BsrI	ACTGG	3 cut(s)	165, 380, 869
BssECI	CCNNGG	7 cut(s)	45, 84, 442, 760, 922, 982, 1500
BssMI	GATC	3 cut(s)	156, 420, 556
BssNI	GRCGYC	2 cut(s)	36, 1263
BssSI	CACGAG	1 cut(s)	320
BssT1I	CCWWGG	6 cut(s)	45, 84, 442, 760, 922, 982
Bst2BI	CACGAG	1 cut(s)	320
Bst2UI	CCWGG	5 cut(s)	221, 531, 1267, 1529, 1666
Bst4CI	ACNGT	6 cut(s)	98, 361, 482, 817, 842, 1198
Bst6I	CTCTTC	3 cut(s)	1081, 1285, 1343
BstACI	GRCGYC	2 cut(s)	36, 1263
BstAPI	GCANNNNNTGC	2 cut(s)	332, 1189
BstAUI	TGTACA	2 cut(s)	485, 779
BstC8I	GCNNGC	7 cut(s)	902, 932, 974, 1144, 1344, 1488, 1579
BstDSI	CCRYGG	3 cut(s)	45, 442, 760
BstF5I	GGATG	3 cut(s)	85, 472, 512
BstKTI	GATC	3 cut(s)	159, 423, 559
BstMAI	GTCTC	2 cut(s)	579, 1245
BstMBI	GATC	3 cut(s)	156, 420, 556
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 170, 332, 978, 1159, 1189, 1198
BstNI	CCWGG	5 cut(s)	221, 531, 1267, 1529, 1666
BstNSI	RCATGY	3 cut(s)	492, 934, 945
BstSCI	CCNGG	7 cut(s)	219, 529, 691, 1265, 1499, 1527, 1664
BstSFI	CTRYAG	3 cut(s)	67, 909, 1271
BstSLI	GKGCMC	1 cut(s)	321
BstV1I	GCAGC	4 cut(s)	448, 1058, 1257, 1626
BstV2I	GAAGAC	3 cut(s)	114, 666, 677
BstX2I	RGATCY	1 cut(s)	420
BstYI	RGATCY	1 cut(s)	420
BsuI	GTATCC	2 cut(s)	494, 861
BsuRI	GGCC	4 cut(s)	164, 907, 1452, 1551
BtgI	CCRYGG	3 cut(s)	45, 442, 760
BtgZI	GCGATG	1 cut(s)	537
BtsCI	GGATG	3 cut(s)	85, 472, 512
BtsI	GCAGTG	1 cut(s)	1588
BtsIMutI	CAGTG	7 cut(s)	542, 613, 813, 847, 1415, 1447, 1588
BveI	ACCTGC	1 cut(s)	1335
Cac8I	GCNNGC	7 cut(s)	902, 932, 974, 1144, 1344, 1488, 1579
CaiI	CAGNNNCTG	1 cut(s)	1388
Cfr13I	GGNCC	3 cut(s)	527, 1451, 1662
CseI	GACGC	3 cut(s)	122, 561, 1271
CsiI	ACCWGGT	1 cut(s)	1527
Csp6I	GTAC	8 cut(s)	99, 486, 628, 637, 780, 1295, 1321, 1366
CviQI	GTAC	8 cut(s)	99, 486, 628, 637, 780, 1295, 1321, 1366
DpnI	GATC	3 cut(s)	158, 422, 558
DpnII	GATC	3 cut(s)	156, 420, 556
DraI	TTTAAA	1 cut(s)	834
DriI	GACNNNNNGTC	1 cut(s)	40
Eam1104I	CTCTTC	3 cut(s)	1081, 1285, 1343
Eam1105I	GACNNNNNGTC	1 cut(s)	40
EarI	CTCTTC	3 cut(s)	1081, 1285, 1343
Eco130I	CCWWGG	6 cut(s)	45, 84, 442, 760, 922, 982
Eco47I	GGWCC	2 cut(s)	527, 1662
EcoRI	GAATTC	2 cut(s)	1102, 1463
EcoRII	CCWGG	5 cut(s)	219, 529, 1265, 1527, 1664
EcoT14I	CCWWGG	6 cut(s)	45, 84, 442, 760, 922, 982
EcoT22I	ATGCAT	1 cut(s)	24
ErhI	CCWWGG	6 cut(s)	45, 84, 442, 760, 922, 982
Esp3I	CGTCTC	1 cut(s)	579
FalI	AAGNNNNNCTT	2 cut(s)	256, 288
FaqI	GGGAC	1 cut(s)	423
FauNDI	CATATG	1 cut(s)	1203
Fnu4HI	GCNGC	5 cut(s)	462, 905, 1047, 1271, 1615
FokI	GGATG	3 cut(s)	92, 459, 499
Fsp4HI	GCNGC	5 cut(s)	462, 905, 1047, 1271, 1615
FspBI	CTAG	2 cut(s)	872, 1487
GluI	GCNGC	5 cut(s)	462, 905, 1047, 1271, 1615
GsuI	CTGGAG	1 cut(s)	1130
HaeIII	GGCC	4 cut(s)	164, 907, 1452, 1551
HapII	CCGG	2 cut(s)	692, 1500
HgaI	GACGC	3 cut(s)	122, 561, 1271
Hin1I	GRCGYC	2 cut(s)	36, 1263
HincII	GTYRAC	1 cut(s)	1590
HindII	GTYRAC	1 cut(s)	1590
HindIII	AAGCTT	2 cut(s)	432, 1575
HinfI	GANTC	8 cut(s)	5, 41, 147, 200, 848, 1238, 1385, 1565
HpaII	CCGG	2 cut(s)	692, 1500
HphI	GGTGA	3 cut(s)	734, 1016, 1516
Hpy166II	GTNNAC	4 cut(s)	319, 1232, 1564, 1590
Hpy188I	TCNGA	5 cut(s)	10, 205, 353, 853, 1188
Hpy188III	TCNNGA	9 cut(s)	151, 193, 264, 402, 554, 584, 1109, 1522, 1571
Hpy8I	GTNNAC	4 cut(s)	319, 1232, 1564, 1590
Hpy99I	CGWCG	8 cut(s)	38, 41, 56, 59, 62, 77, 116, 137
HpyAV	CCTTC	4 cut(s)	190, 650, 1414, 1442
HpyCH4III	ACNGT	6 cut(s)	98, 361, 482, 817, 842, 1198
HpyCH4IV	ACGT	2 cut(s)	36, 1135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 170, 332, 978, 1159, 1189, 1198
HpySE526I	ACGT	2 cut(s)	36, 1135
Hsp92I	GRCGYC	2 cut(s)	36, 1263
KpnI	GGTACC	1 cut(s)	640
Kzo9I	GATC	3 cut(s)	156, 420, 556
LmnI	GCTCC	4 cut(s)	694, 761, 997, 1423
Lsp1109I	GCAGC	4 cut(s)	448, 1058, 1257, 1626
LweI	GCATC	5 cut(s)	16, 70, 459, 1179, 1192
MabI	ACCWGGT	1 cut(s)	1527
MaeI	CTAG	2 cut(s)	872, 1487
MaeII	ACGT	2 cut(s)	36, 1135
MaeIII	GTNAC	3 cut(s)	1031, 1217, 1504
MalI	GATC	3 cut(s)	158, 422, 558
MboI	GATC	3 cut(s)	156, 420, 556
MflI	RGATCY	1 cut(s)	420
MhlI	GDGCHC	1 cut(s)	321
MlyI	GAGTC	6 cut(s)	50, 209, 857, 1247, 1394, 1559
Mph1103I	ATGCAT	1 cut(s)	24
MroXI	GAANNNNTTC	2 cut(s)	1401, 1463
MseI	TTAA	4 cut(s)	371, 711, 833, 1256
MslI	CAYNNNNRTG	4 cut(s)	547, 935, 1128, 1410
MspI	CCGG	2 cut(s)	692, 1500
MspR9I	CCNGG	7 cut(s)	221, 531, 693, 1267, 1501, 1529, 1666
Mva1269I	GAATGC	1 cut(s)	279
MvaI	CCWGG	5 cut(s)	221, 531, 1267, 1529, 1666
MwoI	GCNNNNNNNGC	7 cut(s)	69, 170, 332, 978, 1159, 1189, 1198
NciI	CCSGG	2 cut(s)	693, 1501
NcoI	CCATGG	3 cut(s)	45, 442, 760
NdeI	CATATG	1 cut(s)	1203
NdeII	GATC	3 cut(s)	156, 420, 556
NheI	GCTAGC	1 cut(s)	1486
NlaIV	GGNNCC	2 cut(s)	638, 1663
NmuCI	GTSAC	2 cut(s)	1217, 1504
NsiI	ATGCAT	1 cut(s)	24
NspI	RCATGY	3 cut(s)	492, 934, 945
PaeI	GCATGC	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	2 cut(s)	102, 156
PctI	GAATGC	1 cut(s)	279
PdmI	GAANNNNTTC	2 cut(s)	1401, 1463
PfeI	GAWTC	1 cut(s)	147
PkrI	GCNGC	5 cut(s)	463, 906, 1048, 1272, 1616
PleI	GAGTC	6 cut(s)	49, 208, 856, 1246, 1393, 1559
PpsI	GAGTC	6 cut(s)	49, 208, 856, 1246, 1393, 1559
Psp1406I	AACGTT	1 cut(s)	1135
Psp6I	CCWGG	5 cut(s)	219, 529, 1265, 1527, 1664
PspGI	CCWGG	5 cut(s)	219, 529, 1265, 1527, 1664
PspN4I	GGNNCC	2 cut(s)	638, 1663
PspPI	GGNCC	3 cut(s)	527, 1451, 1662
PstI	CTGCAG	1 cut(s)	1275
PstNI	CAGNNNCTG	1 cut(s)	1388
PsuI	RGATCY	1 cut(s)	420
RsaI	GTAC	8 cut(s)	100, 487, 629, 638, 781, 1296, 1322, 1367
RsaNI	GTAC	8 cut(s)	99, 486, 628, 637, 780, 1295, 1321, 1366
RseI	CAYNNNNRTG	4 cut(s)	547, 935, 1128, 1410
SaqAI	TTAA	4 cut(s)	371, 711, 833, 1256
SatI	GCNGC	5 cut(s)	462, 905, 1047, 1271, 1615
Sau3AI	GATC	3 cut(s)	156, 420, 556
Sau96I	GGNCC	3 cut(s)	527, 1451, 1662
ScaI	AGTACT	3 cut(s)	629, 1296, 1367
SchI	GAGTC	6 cut(s)	50, 209, 857, 1247, 1394, 1559
ScrFI	CCNGG	7 cut(s)	221, 531, 693, 1267, 1501, 1529, 1666
SduI	GDGCHC	1 cut(s)	321
SexAI	ACCWGGT	1 cut(s)	1527
SfaNI	GCATC	5 cut(s)	16, 70, 459, 1179, 1192
SfcI	CTRYAG	3 cut(s)	67, 909, 1271
SinI	GGWCC	2 cut(s)	527, 1662
SmiMI	CAYNNNNRTG	4 cut(s)	547, 935, 1128, 1410
SmlI	CTYRAG	2 cut(s)	1247, 1569
SmoI	CTYRAG	2 cut(s)	1247, 1569
SphI	GCATGC	1 cut(s)	934
SsiI	CCGC	5 cut(s)	904, 1036, 1175, 1415, 1445
SspMI	CTAG	2 cut(s)	872, 1487
StyD4I	CCNGG	7 cut(s)	219, 529, 691, 1265, 1499, 1527, 1664
StyI	CCWWGG	6 cut(s)	45, 84, 442, 760, 922, 982
TaaI	ACNGT	6 cut(s)	98, 361, 482, 817, 842, 1198
TaiI	ACGT	2 cut(s)	39, 1138
TaqI	TCGA	7 cut(s)	39, 150, 159, 169, 804, 1457, 1521
TatI	WGTACW	5 cut(s)	485, 627, 779, 1294, 1365
TauI	GCSGC	1 cut(s)	907
TfiI	GAWTC	1 cut(s)	147
Tru1I	TTAA	4 cut(s)	371, 711, 833, 1256
Tru9I	TTAA	4 cut(s)	371, 711, 833, 1256
TscAI	CASTG	7 cut(s)	549, 613, 820, 847, 1415, 1447, 1588
TseFI	GTSAC	2 cut(s)	1217, 1504
TseI	GCWGC	4 cut(s)	461, 1046, 1270, 1614
Tsp45I	GTSAC	2 cut(s)	1217, 1504
TspDTI	ATGAA	9 cut(s)	278, 354, 627, 744, 875, 978, 1086, 1146, 1394
TspGWI	ACGGA	1 cut(s)	549
TspRI	CASTG	7 cut(s)	549, 613, 820, 847, 1415, 1447, 1588
VneI	GTGCAC	1 cut(s)	317
VpaK11BI	GGWCC	2 cut(s)	527, 1662
XapI	RAATTY	3 cut(s)	965, 1102, 1463
XceI	RCATGY	3 cut(s)	492, 934, 945
XmnI	GAANNNNTTC	2 cut(s)	1401, 1463
XspI	CTAG	2 cut(s)	872, 1487
ZraI	GACGTC	1 cut(s)	37
ZrmI	AGTACT	3 cut(s)	629, 1296, 1367
Zsp2I	ATGCAT	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.