Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005612

Physical Location & Seq

Genomic Coordinates Forward (+)

28435319 .. 28446986

Gene Structure 11668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00351790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGTATTCCGACGCCATATTATCGTCCTCGGAAGATATGCACGACGCCAACGACGTTGAATCCGACGAGGAGGGCTTCTACAGCGACGAGAACGACGTCGCCTCCGACTACAATACCGACGACGACGACGTCGATGATTACGTCATCGAGGAAGATGAAGACGGAATCAACATGATCCAGGCTCGTCGCCCTGAGAATAATTACATCATCTTGAAGGAGTTAGATATAAAGGAACGCCAGGAAGATGATATTACTAGTGTATCTTCTGTGCTGTCCATATCAAGAGCTGCTTCAACCATTTTGCTTCGCTACTATAATTGGAATGTTAGTGAAGTGCATGAAGCATGGTTTGCAGATGAAGAGAAAGTCCGGAAAACTGTAGGCTTGTTACCTGGGCCAGTTCAGTTTGCGAAGTCCAGAGAACTGATGTGTGGGATCTGTTTTGAAGCCTTTCCACGTAGTAGGCTAAAATCAGCAGATTGTGGTCATCCTTTCTGTTTTGAATGTTGGGAAGGCTACATTAGAACATCCATCAACGATGGTCCTGGATGTTTGATGCTGAGATGTCCTGATCCATCTTGTGGTGCCGCTGTTGGTCAAGATATGATTAATATATTTGCCTGTGATGATGATAAGCGCAAGTACTCTAAGTACCTGCTTAGGTCTTTTGTTGAAGACAACAAGAAGGATGATACAGAGCTGGTTGAAGTTTTCAATAATGTCGCTGCTGTTATTCCTTTCTTGTTTCTCCAACTCAAAGCATATTACTTGAATTATGATTATTCTAACACTGCGATGACCAAGTGGTGTCCTGCTCCGGGTTGCGAGCATGCTGTTAATTATGTTGGAGATAATGAAAATTATGATGTTTCTTGCCTCTGTTCATACGACTTCTGCTGGAATTGTACGGAGGAAACCCATCGTCCTGTGGACTGTAACACTGTAAGGTTATGGATCTTGAAGAACAGTGCTGAGTCTGAAAACATGAACTGGCTATGCCTCGGTGCATGGTCAGACCATGGTGAGAGGACCGGCGGTTTCTATGCTTGTAATCGCTATGAGGCAGCTAAGCAAGAGGGAGTTTATGATGAGGCTGAGAGAAGAAGAGAAATGGCAAAGAATTCTCTGGAGAGATACACTCATTATTATGAACGTTGGGCAAGCAATCAATCGTCAAGGCAGAAAGCTCTTGTTGATTTACATCAAATGCAAACTGTCAATATGGAGAAGCTGAGTGAGATACAATGTCAACCTGAGTCTCAGCTCAAGTTCTTATCTGATGCCTGGCAACAGATTGTTGAATGTAGGAGAGTGCTGAAATGGACTTATGCATATGGATACTACCTAACTGAGCATGAGAGTGCTAAGAAGCAGTTTTTTGAGTACTTGCAAGGGCATTGGAGAATCACCTATCAGATGTGGACTGTCACCAAGCTGGCAGTCTGGCAACAAGCTCAAAAAATGGAACCAGCAAAGGAAAAGGTGGCAGAGGAAAGGAAACTAGTCGAGCGGGTGGCTCCGGCAGAAACTAACCACTGTATTTATGCCAATGTCAAGTTGCCACCACATGCCAAGTGTGCTACCATTACCAGTGAGTATGCTAGCCTCTTGTATTGTGGCAAACTGGGTTCGACTTGGAACAATAAGAGGAACTCTTGGTGTGAGAACAGAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

558

Amino Acids

64.71

Weight (kDa)

4.89

Isoelectric Point (pI)

53.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	79 - 117	8.6e-09	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	255 - 312	1.7e-11	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05890 AT1G05890 AT2G31510 AT2G31510 AT2G31510
fragaria_vesca	FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130
malus_domestica	MD04G1007200.v1.1 MD13G1275700.v1.1
prunus_persica	Prupe.1G191400_v2.0.a1
pyrus_communis	pycom04g03420 pycom13g28570
rosa_chinensis	RchiOBHm_Chr4g0407061
rosa_laevigata	RLG00000008740
rosa_multiflora	Rmu_sc0000600.1_g000003
rosa_roxburghii	Rroxscaffold_5G00351790
rosa_rugosa	Rorug04G0077500 Rorug04G0077600 Rorug04G0077700
rosa_samantha	Rh4AG142400 Rh4BG140100 Rh4CG148900 Rh4DG136500
rosa_wichuraiana	Rw4G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	2 cut(s)	99, 132
Acc36I	ACCTGC	1 cut(s)	663
AccB1I	GGYRCC	1 cut(s)	584
AccB7I	CCANNNNNTGG	1 cut(s)	581
AccBSI	CCGCTC	1 cut(s)	1510
AccIII	TCCGGA	1 cut(s)	369
AciI	CCGC	3 cut(s)	588, 1035, 1510
AclI	AACGTT	1 cut(s)	1153
AclWI	GGATC	4 cut(s)	169, 443, 566, 962
AcsI	RAATTY	1 cut(s)	1120
AcyI	GRCGYC	4 cut(s)	12, 45, 96, 129
AfaI	GTAC	4 cut(s)	644, 653, 907, 1385
AfiI	CCNNNNNNNGG	2 cut(s)	581, 818
AhlI	ACTAGT	2 cut(s)	254, 1501
AjnI	CCWGG	5 cut(s)	177, 237, 391, 544, 1283
AluBI	AGCT	8 cut(s)	287, 700, 1067, 1187, 1231, 1264, 1435, 1454
AluI	AGCT	8 cut(s)	287, 700, 1067, 1187, 1231, 1264, 1435, 1454
Alw26I	GTCTC	1 cut(s)	1263
AlwI	GGATC	4 cut(s)	169, 443, 566, 962
Aor13HI	TCCGGA	1 cut(s)	369
AoxI	GGCC	1 cut(s)	395
ApeKI	GCWGC	3 cut(s)	287, 725, 1064
ApoI	RAATTY	1 cut(s)	1120
AseI	ATTAAT	1 cut(s)	609
Asp700I	GAANNNNTTC	1 cut(s)	450
AspLEI	GCGC	1 cut(s)	639
AspS9I	GGNCC	3 cut(s)	395, 542, 1029
AsuC2I	CCSGG	1 cut(s)	819
AsuHPI	GGTGA	3 cut(s)	1034, 1399, 1420
AsuNHI	GCTAGC	1 cut(s)	1601
AvaII	GGWCC	2 cut(s)	542, 1029
BaeI	ACNNNNGTAYC	2 cut(s)	243, 276
BanI	GGYRCC	1 cut(s)	584
BbsI	GAAGAC	2 cut(s)	165, 681
BbvI	GCAGC	3 cut(s)	274, 712, 1076
BccI	CCATC	4 cut(s)	533, 539, 583, 927
BciT130I	CCWGG	5 cut(s)	179, 239, 393, 546, 1285
BciVI	GTATCC	1 cut(s)	1331
BcnI	CCSGG	1 cut(s)	819
BcoDI	GTCTC	1 cut(s)	1263
BcuI	ACTAGT	2 cut(s)	254, 1501
BfaI	CTAG	3 cut(s)	255, 1502, 1602
BfmI	CTRYAG	2 cut(s)	79, 378
BfuAI	ACCTGC	1 cut(s)	663
BfuI	GTATCC	1 cut(s)	1331
BisI	GCNGC	4 cut(s)	288, 588, 726, 1065
BlpI	GCTNAGC	1 cut(s)	1068
BlsI	GCNGC	4 cut(s)	289, 589, 727, 1066
BmcAI	AGTACT	2 cut(s)	644, 1385
Bme1390I	CCNGG	6 cut(s)	179, 239, 393, 546, 819, 1285
Bme18I	GGWCC	2 cut(s)	542, 1029
BmgT120I	GGNCC	3 cut(s)	395, 542, 1029
BmiI	GGNNCC	3 cut(s)	586, 1467, 1518
BmrFI	CCNGG	6 cut(s)	179, 239, 393, 546, 819, 1285
BmrI	ACTGGG	1 cut(s)	1634
BmsI	GCATC	2 cut(s)	546, 1270
BmtI	GCTAGC	1 cut(s)	1605
BmuI	ACTGGG	1 cut(s)	1634
BpiI	GAAGAC	2 cut(s)	165, 681
BplI	GAGNNNNNCTC	2 cut(s)	1123, 1155
BpmI	CTGGAG	1 cut(s)	1148
Bpu10I	CCTNAGC	1 cut(s)	659
Bpu1102I	GCTNAGC	1 cut(s)	1068
BpuEI	CTTGAG	1 cut(s)	1250
BpuMI	CCSGG	1 cut(s)	819
BsaAI	YACGTR	1 cut(s)	458
BsaBI	GATNNNNATC	1 cut(s)	1200
BsaHI	GRCGYC	4 cut(s)	12, 45, 96, 129
BsaJI	CCNNGG	4 cut(s)	27, 392, 1000, 1018
BsaWI	WCCGGW	1 cut(s)	369
BsaXI	ACNNNNNCTCC	2 cut(s)	86, 116
Bsc4I	CCNNNNNNNGG	2 cut(s)	581, 818
Bse118I	RCCGGY	1 cut(s)	1031
Bse1I	ACTGG	4 cut(s)	398, 995, 1590, 1629
Bse8I	GATNNNNATC	1 cut(s)	1200
BseAI	TCCGGA	1 cut(s)	369
BseBI	CCWGG	5 cut(s)	179, 239, 393, 546, 1285
BseDI	CCNNGG	4 cut(s)	27, 392, 1000, 1018
BseGI	GGATG	4 cut(s)	487, 527, 554, 694
BseJI	GATNNNNATC	1 cut(s)	1200
BseLI	CCNNNNNNNGG	2 cut(s)	581, 818
BseMII	CTCAG	8 cut(s)	183, 551, 963, 1086, 1223, 1245, 1274, 1341
BseNI	ACTGG	4 cut(s)	398, 995, 1590, 1629
BseRI	GAGGAG	1 cut(s)	83
BseXI	GCAGC	3 cut(s)	274, 712, 1076
BshFI	GGCC	1 cut(s)	397
BshNI	GGYRCC	1 cut(s)	584
BsiSI	CCGG	4 cut(s)	370, 818, 1032, 1520
BslI	CCNNNNNNNGG	2 cut(s)	581, 818
BsmAI	GTCTC	1 cut(s)	1263
BsnI	GGCC	1 cut(s)	397
Bsp13I	TCCGGA	1 cut(s)	369
Bsp143I	GATC	4 cut(s)	174, 435, 571, 954
Bsp1720I	GCTNAGC	1 cut(s)	1068
Bsp19I	CCATGG	1 cut(s)	1018
BspACI	CCGC	3 cut(s)	588, 1035, 1510
BspANI	GGCC	1 cut(s)	397
BspCNI	CTCAG	8 cut(s)	184, 552, 964, 1087, 1224, 1246, 1273, 1342
BspEI	TCCGGA	1 cut(s)	369
BspLI	GGNNCC	3 cut(s)	586, 1467, 1518
BspMI	ACCTGC	1 cut(s)	663
BspOI	GCTAGC	1 cut(s)	1605
BspPI	GGATC	4 cut(s)	169, 443, 566, 962
BspT107I	GGYRCC	1 cut(s)	584
BsrBI	CCGCTC	1 cut(s)	1510
BsrFI	RCCGGY	1 cut(s)	1031
BsrI	ACTGG	4 cut(s)	398, 995, 1590, 1629
BssAI	RCCGGY	1 cut(s)	1031
BssECI	CCNNGG	4 cut(s)	27, 392, 1000, 1018
BssMI	GATC	4 cut(s)	174, 435, 571, 954
BssNI	GRCGYC	4 cut(s)	12, 45, 96, 129
BssT1I	CCWWGG	1 cut(s)	1018
Bst2UI	CCWGG	5 cut(s)	179, 239, 393, 546, 1285
Bst4CI	ACNGT	7 cut(s)	379, 935, 943, 968, 1216, 1426, 1538
Bst6I	CTCTTC	2 cut(s)	354, 1099
BstACI	GRCGYC	4 cut(s)	12, 45, 96, 129
BstAPI	GCANNNNNTGC	1 cut(s)	350
BstBAI	YACGTR	1 cut(s)	458
BstC8I	GCNNGC	5 cut(s)	827, 831, 1162, 1437, 1603
BstDSI	CCRYGG	1 cut(s)	1018
BstF5I	GGATG	4 cut(s)	487, 527, 554, 694
BstHHI	GCGC	1 cut(s)	639
BstKTI	GATC	4 cut(s)	177, 438, 574, 957
BstMAI	GTCTC	1 cut(s)	1263
BstMBI	GATC	4 cut(s)	174, 435, 571, 954
BstMWI	GCNNNNNNNGC	3 cut(s)	81, 350, 1577
BstNI	CCWGG	5 cut(s)	179, 239, 393, 546, 1285
BstNSI	RCATGY	2 cut(s)	833, 1571
BstSCI	CCNGG	6 cut(s)	177, 237, 391, 544, 817, 1283
BstSFI	CTRYAG	2 cut(s)	79, 378
BstV1I	GCAGC	3 cut(s)	274, 712, 1076
BstV2I	GAAGAC	2 cut(s)	165, 681
BstX2I	RGATCY	2 cut(s)	435, 954
BstYI	RGATCY	2 cut(s)	435, 954
BsuI	GTATCC	1 cut(s)	1331
BsuRI	GGCC	1 cut(s)	397
BtgI	CCRYGG	1 cut(s)	1018
BtgZI	GCGATG	1 cut(s)	809
BtsCI	GGATG	4 cut(s)	487, 527, 554, 694
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	5 cut(s)	789, 939, 973, 1534, 1597
BveI	ACCTGC	1 cut(s)	663
Cac8I	GCNNGC	5 cut(s)	827, 831, 1162, 1437, 1603
CfoI	GCGC	1 cut(s)	639
Cfr10I	RCCGGY	1 cut(s)	1031
Cfr13I	GGNCC	3 cut(s)	395, 542, 1029
CseI	GACGC	2 cut(s)	20, 53
Csp6I	GTAC	4 cut(s)	643, 652, 906, 1384
CviAII	CATG	9 cut(s)	172, 338, 345, 830, 985, 1008, 1019, 1355, 1568
CviQI	GTAC	4 cut(s)	643, 652, 906, 1384
DpnI	GATC	4 cut(s)	176, 437, 573, 956
DpnII	GATC	4 cut(s)	174, 435, 571, 954
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
Eam1104I	CTCTTC	2 cut(s)	354, 1099
EarI	CTCTTC	2 cut(s)	354, 1099
Eco130I	CCWWGG	1 cut(s)	1018
Eco47I	GGWCC	2 cut(s)	542, 1029
EcoRI	GAATTC	1 cut(s)	1120
EcoRII	CCWGG	5 cut(s)	177, 237, 391, 544, 1283
EcoT14I	CCWWGG	1 cut(s)	1018
EcoT22I	ATGCAT	1 cut(s)	1333
ErhI	CCWWGG	1 cut(s)	1018
FaeI	CATG	9 cut(s)	175, 341, 348, 833, 988, 1011, 1022, 1358, 1571
FalI	AAGNNNNNCTT	2 cut(s)	274, 306
FatI	CATG	9 cut(s)	171, 337, 344, 829, 984, 1007, 1018, 1354, 1567
FauI	CCCGC	1 cut(s)	1503
FauNDI	CATATG	1 cut(s)	1333
Fnu4HI	GCNGC	4 cut(s)	288, 588, 726, 1065
FokI	GGATG	4 cut(s)	474, 514, 561, 701
Fsp4HI	GCNGC	4 cut(s)	288, 588, 726, 1065
FspBI	CTAG	3 cut(s)	255, 1502, 1602
GlaI	GCGC	1 cut(s)	638
GluI	GCNGC	4 cut(s)	288, 588, 726, 1065
GsuI	CTGGAG	1 cut(s)	1148
HaeIII	GGCC	1 cut(s)	397
HapII	CCGG	4 cut(s)	370, 818, 1032, 1520
HgaI	GACGC	2 cut(s)	20, 53
HhaI	GCGC	1 cut(s)	639
Hin1I	GRCGYC	4 cut(s)	12, 45, 96, 129
Hin1II	CATG	9 cut(s)	175, 341, 348, 833, 988, 1011, 1022, 1358, 1571
Hin6I	GCGC	1 cut(s)	637
HinP1I	GCGC	1 cut(s)	637
HincII	GTYRAC	1 cut(s)	1250
HindII	GTYRAC	1 cut(s)	1250
HinfI	GANTC	5 cut(s)	59, 165, 974, 1256, 1404
HpaII	CCGG	4 cut(s)	370, 818, 1032, 1520
HphI	GGTGA	3 cut(s)	1034, 1399, 1420
Hpy166II	GTNNAC	3 cut(s)	931, 1250, 1422
Hpy188I	TCNGA	8 cut(s)	10, 31, 64, 106, 979, 1015, 1279, 1416
Hpy188III	TCNNGA	8 cut(s)	211, 282, 370, 417, 569, 599, 958, 1127
Hpy8I	GTNNAC	3 cut(s)	931, 1250, 1422
HpyAV	CCTTC	3 cut(s)	208, 506, 679
HpyCH4III	ACNGT	7 cut(s)	379, 935, 943, 968, 1216, 1426, 1538
HpyCH4IV	ACGT	6 cut(s)	54, 96, 129, 141, 457, 1153
HpyCH4V	TGCA	7 cut(s)	40, 337, 353, 1007, 1210, 1331, 1390
HpyF10VI	GCNNNNNNNGC	3 cut(s)	81, 350, 1577
HpySE526I	ACGT	6 cut(s)	54, 96, 129, 141, 457, 1153
Hsp92I	GRCGYC	4 cut(s)	12, 45, 96, 129
Hsp92II	CATG	9 cut(s)	175, 341, 348, 833, 988, 1011, 1022, 1358, 1571
HspAI	GCGC	1 cut(s)	637
Kpn2I	TCCGGA	1 cut(s)	369
Kzo9I	GATC	4 cut(s)	174, 435, 571, 954
LmnI	GCTCC	2 cut(s)	820, 1522
Lsp1109I	GCAGC	3 cut(s)	274, 712, 1076
LweI	GCATC	2 cut(s)	546, 1270
MaeI	CTAG	3 cut(s)	255, 1502, 1602
MaeII	ACGT	6 cut(s)	54, 96, 129, 141, 457, 1153
MaeIII	GTNAC	3 cut(s)	387, 935, 1426
MalI	GATC	4 cut(s)	176, 437, 573, 956
MbiI	CCGCTC	1 cut(s)	1510
MboI	GATC	4 cut(s)	174, 435, 571, 954
MflI	RGATCY	2 cut(s)	435, 954
MluCI	AATT	7 cut(s)	199, 316, 772, 838, 859, 901, 1120
MlyI	GAGTC	2 cut(s)	983, 1265
MmeI	TCCRAC	5 cut(s)	33, 87, 129, 775, 826
Mph1103I	ATGCAT	1 cut(s)	1333
MroI	TCCGGA	1 cut(s)	369
MroXI	GAANNNNTTC	1 cut(s)	450
MseI	TTAA	2 cut(s)	609, 837
MslI	CAYNNNNRTG	3 cut(s)	794, 1146, 1359
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	4 cut(s)	370, 818, 1032, 1520
MspR9I	CCNGG	6 cut(s)	179, 239, 393, 546, 819, 1285
MvaI	CCWGG	5 cut(s)	179, 239, 393, 546, 1285
MwoI	GCNNNNNNNGC	3 cut(s)	81, 350, 1577
NciI	CCSGG	1 cut(s)	819
NcoI	CCATGG	1 cut(s)	1018
NdeI	CATATG	1 cut(s)	1333
NdeII	GATC	4 cut(s)	174, 435, 571, 954
NheI	GCTAGC	1 cut(s)	1601
NlaIII	CATG	9 cut(s)	175, 341, 348, 833, 988, 1011, 1022, 1358, 1571
NlaIV	GGNNCC	3 cut(s)	586, 1467, 1518
NmuCI	GTSAC	1 cut(s)	1426
NsiI	ATGCAT	1 cut(s)	1333
NspI	RCATGY	2 cut(s)	833, 1571
PaeI	GCATGC	1 cut(s)	833
PcsI	WCGNNNNNNNCGW	8 cut(s)	48, 51, 60, 93, 102, 126, 129, 138
PdmI	GAANNNNTTC	1 cut(s)	450
PfeI	GAWTC	3 cut(s)	59, 165, 1404
PflFI	GACNNNGTC	1 cut(s)	128
PflMI	CCANNNNNTGG	1 cut(s)	581
PfoI	TCCNGGA	1 cut(s)	544
PkrI	GCNGC	4 cut(s)	289, 589, 727, 1066
PleI	GAGTC	2 cut(s)	982, 1264
PpsI	GAGTC	2 cut(s)	982, 1264
Ppu21I	YACGTR	1 cut(s)	458
PshBI	ATTAAT	1 cut(s)	609
Psp1406I	AACGTT	1 cut(s)	1153
Psp6I	CCWGG	5 cut(s)	177, 237, 391, 544, 1283
PspGI	CCWGG	5 cut(s)	177, 237, 391, 544, 1283
PspN4I	GGNNCC	3 cut(s)	586, 1467, 1518
PspPI	GGNCC	3 cut(s)	395, 542, 1029
PsuI	RGATCY	2 cut(s)	435, 954
PsyI	GACNNNGTC	1 cut(s)	128
RsaI	GTAC	4 cut(s)	644, 653, 907, 1385
RsaNI	GTAC	4 cut(s)	643, 652, 906, 1384
RseI	CAYNNNNRTG	3 cut(s)	794, 1146, 1359
SaqAI	TTAA	2 cut(s)	609, 837
SatI	GCNGC	4 cut(s)	288, 588, 726, 1065
Sau3AI	GATC	4 cut(s)	174, 435, 571, 954
Sau96I	GGNCC	3 cut(s)	395, 542, 1029
ScaI	AGTACT	2 cut(s)	644, 1385
SchI	GAGTC	2 cut(s)	983, 1265
ScrFI	CCNGG	6 cut(s)	179, 239, 393, 546, 819, 1285
SfaNI	GCATC	2 cut(s)	546, 1270
SfcI	CTRYAG	2 cut(s)	79, 378
SinI	GGWCC	2 cut(s)	542, 1029
SmiMI	CAYNNNNRTG	3 cut(s)	794, 1146, 1359
SmlI	CTYRAG	1 cut(s)	1265
SmoI	CTYRAG	1 cut(s)	1265
SpeI	ACTAGT	2 cut(s)	254, 1501
SphI	GCATGC	1 cut(s)	833
Sse9I	AATT	7 cut(s)	199, 316, 772, 838, 859, 901, 1120
SsiI	CCGC	3 cut(s)	588, 1035, 1510
SspMI	CTAG	3 cut(s)	255, 1502, 1602
StyD4I	CCNGG	6 cut(s)	177, 237, 391, 544, 817, 1283
StyI	CCWWGG	1 cut(s)	1018
TaaI	ACNGT	7 cut(s)	379, 935, 943, 968, 1216, 1426, 1538
TaiI	ACGT	6 cut(s)	57, 99, 132, 144, 460, 1156
TaqI	TCGA	4 cut(s)	132, 147, 1506, 1631
TasI	AATT	7 cut(s)	199, 316, 772, 838, 859, 901, 1120
TatI	WGTACW	2 cut(s)	642, 1383
TauI	GCSGC	1 cut(s)	590
TfiI	GAWTC	3 cut(s)	59, 165, 1404
Tru1I	TTAA	2 cut(s)	609, 837
Tru9I	TTAA	2 cut(s)	609, 837
TscAI	CASTG	5 cut(s)	796, 946, 973, 1541, 1597
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	3 cut(s)	287, 725, 1064
Tsp45I	GTSAC	1 cut(s)	1426
TspDTI	ATGAA	7 cut(s)	171, 354, 372, 870, 873, 1001, 1164
TspGWI	ACGGA	2 cut(s)	177, 923
TspRI	CASTG	5 cut(s)	796, 946, 973, 1541, 1597
Tth111I	GACNNNGTC	1 cut(s)	128
Van91I	CCANNNNNTGG	1 cut(s)	581
VpaK11BI	GGWCC	2 cut(s)	542, 1029
VspI	ATTAAT	1 cut(s)	609
XapI	RAATTY	1 cut(s)	1120
XceI	RCATGY	2 cut(s)	833, 1571
XmnI	GAANNNNTTC	1 cut(s)	450
XspI	CTAG	3 cut(s)	255, 1502, 1602
ZraI	GACGTC	2 cut(s)	97, 130
ZrmI	AGTACT	2 cut(s)	644, 1385
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.