E3 ubiquitin-protein ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05890 AT1G05890 AT2G31510 AT2G31510 AT2G31510 |
| fragaria_vesca | FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 |
| malus_domestica | MD04G1007200.v1.1 MD13G1275700.v1.1 |
| prunus_persica | Prupe.1G191400_v2.0.a1 |
| pyrus_communis | pycom04g03420 pycom13g28570 |
| rosa_chinensis | RchiOBHm_Chr4g0407061 |
| rosa_laevigata | RLG00000008740 |
| rosa_multiflora | Rmu_sc0000600.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00351790 |
| rosa_rugosa | Rorug04G0077500 Rorug04G0077600 Rorug04G0077700 |
| rosa_samantha | Rh4AG142400 Rh4BG140100 Rh4CG148900 Rh4DG136500 |
| rosa_wichuraiana | Rw4G011600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 110, 116 |
| AatII | GACGTC | 2 cut(s) | 39, 114 |
| Acc36I | ACCTGC | 1 cut(s) | 1332 |
| Acc65I | GGTACC | 1 cut(s) | 633 |
| AccB1I | GGYRCC | 1 cut(s) | 633 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 563 |
| AccI | GTMKAC | 1 cut(s) | 1671 |
| AccII | CGCG | 1 cut(s) | 441 |
| AciI | CCGC | 6 cut(s) | 439, 441, 901, 1033, 1172, 1442 |
| AclI | AACGTT | 1 cut(s) | 1132 |
| AclWI | GGATC | 4 cut(s) | 161, 425, 548, 1591 |
| AcsI | RAATTY | 5 cut(s) | 956, 962, 1099, 1460, 1714 |
| AcyI | GRCGYC | 3 cut(s) | 27, 36, 111 |
| AfaI | GTAC | 7 cut(s) | 626, 635, 778, 1192, 1364, 1700, 1705 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 563, 689, 1441 |
| AflIII | ACRYGT | 1 cut(s) | 1740 |
| AgsI | TTSAA | 6 cut(s) | 193, 273, 399, 428, 911, 962 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 40 |
| AhlI | ACTAGT | 1 cut(s) | 1640 |
| AjiI | CACGTC | 1 cut(s) | 939 |
| AjnI | CCWGG | 3 cut(s) | 526, 1262, 1524 |
| Alw21I | GWGCWC | 1 cut(s) | 944 |
| Alw26I | GTCTC | 2 cut(s) | 607, 1242 |
| Alw44I | GTGCAC | 1 cut(s) | 940 |
| AlwI | GGATC | 4 cut(s) | 161, 425, 548, 1591 |
| AoxI | GGCC | 3 cut(s) | 902, 1447, 1546 |
| ApaLI | GTGCAC | 1 cut(s) | 940 |
| ApeKI | GCWGC | 8 cut(s) | 99, 211, 266, 458, 569, 1043, 1267, 1608 |
| ApoI | RAATTY | 5 cut(s) | 956, 962, 1099, 1460, 1714 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 432, 1398 |
| Asp718I | GGTACC | 1 cut(s) | 633 |
| AspLEI | GCGC | 1 cut(s) | 1535 |
| AspS9I | GGNCC | 3 cut(s) | 524, 1448, 1689 |
| AsuC2I | CCSGG | 2 cut(s) | 690, 1498 |
| AsuHPI | GGTGA | 6 cut(s) | 382, 428, 731, 1013, 1385, 1513 |
| AsuII | TTCGAA | 1 cut(s) | 1718 |
| AsuNHI | GCTAGC | 2 cut(s) | 1139, 1483 |
| AvaII | GGWCC | 2 cut(s) | 524, 1689 |
| BaeGI | GKGCMC | 1 cut(s) | 944 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 222, 255 |
| BanI | GGYRCC | 1 cut(s) | 633 |
| BbsI | GAAGAC | 1 cut(s) | 674 |
| Bbv12I | GWGCWC | 1 cut(s) | 944 |
| BbvI | GCAGC | 8 cut(s) | 111, 223, 253, 445, 556, 1055, 1279, 1620 |
| BccI | CCATC | 5 cut(s) | 73, 515, 565, 1439, 1459 |
| BceAI | ACGGC | 2 cut(s) | 112, 1561 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1083, 1117 |
| BciT130I | CCWGG | 3 cut(s) | 528, 1264, 1526 |
| BciVI | GTATCC | 1 cut(s) | 858 |
| BclI | TGATCA | 1 cut(s) | 588 |
| BcnI | CCSGG | 2 cut(s) | 690, 1498 |
| BcoDI | GTCTC | 2 cut(s) | 607, 1242 |
| BcuI | ACTAGT | 1 cut(s) | 1640 |
| BfaI | CTAG | 5 cut(s) | 162, 869, 1140, 1484, 1641 |
| BfmI | CTRYAG | 2 cut(s) | 805, 1424 |
| BfuAI | ACCTGC | 1 cut(s) | 1332 |
| BfuI | GTATCC | 1 cut(s) | 858 |
| BisI | GCNGC | 9 cut(s) | 100, 212, 267, 459, 570, 902, 1044, 1268, 1609 |
| BlpI | GCTNAGC | 1 cut(s) | 1047 |
| BlsI | GCNGC | 9 cut(s) | 101, 213, 268, 460, 571, 903, 1045, 1269, 1610 |
| BmcAI | AGTACT | 3 cut(s) | 626, 1364, 1700 |
| Bme1390I | CCNGG | 5 cut(s) | 528, 690, 1264, 1498, 1526 |
| Bme18I | GGWCC | 2 cut(s) | 524, 1689 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 40 |
| BmgBI | CACGTC | 1 cut(s) | 939 |
| BmgT120I | GGNCC | 3 cut(s) | 524, 1448, 1689 |
| BmiI | GGNNCC | 2 cut(s) | 635, 1657 |
| BmrFI | CCNGG | 5 cut(s) | 528, 690, 1264, 1498, 1526 |
| BmsI | GCATC | 3 cut(s) | 456, 1189, 1249 |
| BmtI | GCTAGC | 2 cut(s) | 1143, 1487 |
| BpiI | GAAGAC | 1 cut(s) | 674 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1102, 1134 |
| BpmI | CTGGAG | 2 cut(s) | 1127, 1642 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1329 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1047 |
| Bpu14I | TTCGAA | 1 cut(s) | 1718 |
| BpuEI | CTTGAG | 2 cut(s) | 1229, 1551 |
| BpuMI | CCSGG | 2 cut(s) | 690, 1498 |
| BsaAI | YACGTR | 1 cut(s) | 1707 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1179 |
| BsaHI | GRCGYC | 3 cut(s) | 27, 36, 111 |
| BsaI | GGTCTC | 1 cut(s) | 607 |
| BsaJI | CCNNGG | 6 cut(s) | 9, 45, 439, 919, 979, 1497 |
| BsaWI | WCCGGW | 1 cut(s) | 618 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 292, 322 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 563, 689, 1441 |
| Bse1I | ACTGG | 3 cut(s) | 377, 393, 866 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1179 |
| BseBI | CCWGG | 3 cut(s) | 528, 1264, 1526 |
| BseDI | CCNNGG | 6 cut(s) | 9, 45, 439, 919, 979, 1497 |
| BseGI | GGATG | 4 cut(s) | 55, 469, 536, 1450 |
| BseJI | GATNNNNATC | 1 cut(s) | 1179 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 563, 689, 1441 |
| BseMII | CTCAG | 7 cut(s) | 162, 533, 834, 1065, 1224, 1253, 1320 |
| BseNI | ACTGG | 3 cut(s) | 377, 393, 866 |
| BseSI | GKGCMC | 1 cut(s) | 944 |
| BseXI | GCAGC | 8 cut(s) | 111, 223, 253, 445, 556, 1055, 1279, 1620 |
| BseYI | CCCAGC | 1 cut(s) | 489 |
| BsgI | GTGCAG | 1 cut(s) | 1431 |
| Bsh1236I | CGCG | 1 cut(s) | 441 |
| BshFI | GGCC | 3 cut(s) | 904, 1449, 1548 |
| BshNI | GGYRCC | 1 cut(s) | 633 |
| BsiHKAI | GWGCWC | 1 cut(s) | 944 |
| BsiSI | CCGG | 3 cut(s) | 619, 689, 1497 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 563, 689, 1441 |
| BsmAI | GTCTC | 2 cut(s) | 607, 1242 |
| BsmI | GAATGC | 1 cut(s) | 1723 |
| BsnI | GGCC | 3 cut(s) | 904, 1449, 1548 |
| Bso31I | GGTCTC | 1 cut(s) | 607 |
| Bsp119I | TTCGAA | 1 cut(s) | 1718 |
| Bsp1286I | GDGCHC | 1 cut(s) | 944 |
| Bsp143I | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1047 |
| Bsp19I | CCATGG | 1 cut(s) | 45 |
| BspACI | CCGC | 6 cut(s) | 439, 441, 901, 1033, 1172, 1442 |
| BspANI | GGCC | 3 cut(s) | 904, 1449, 1548 |
| BspCNI | CTCAG | 7 cut(s) | 163, 534, 835, 1066, 1225, 1252, 1321 |
| BspFNI | CGCG | 1 cut(s) | 441 |
| BspLI | GGNNCC | 2 cut(s) | 635, 1657 |
| BspMI | ACCTGC | 1 cut(s) | 1332 |
| BspOI | GCTAGC | 2 cut(s) | 1143, 1487 |
| BspPI | GGATC | 4 cut(s) | 161, 425, 548, 1591 |
| BspT104I | TTCGAA | 1 cut(s) | 1718 |
| BspT107I | GGYRCC | 1 cut(s) | 633 |
| BspTNI | GGTCTC | 1 cut(s) | 607 |
| BsrI | ACTGG | 3 cut(s) | 377, 393, 866 |
| BssECI | CCNNGG | 6 cut(s) | 9, 45, 439, 919, 979, 1497 |
| BssMI | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| BssNI | GRCGYC | 3 cut(s) | 27, 36, 111 |
| BssT1I | CCWWGG | 3 cut(s) | 45, 919, 979 |
| Bst2UI | CCWGG | 3 cut(s) | 528, 1264, 1526 |
| Bst4CI | ACNGT | 7 cut(s) | 247, 806, 814, 839, 1195, 1703, 1761 |
| Bst6I | CTCTTC | 1 cut(s) | 1078 |
| BstACI | GRCGYC | 3 cut(s) | 27, 36, 111 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 329, 1186 |
| BstBAI | YACGTR | 1 cut(s) | 1707 |
| BstBI | TTCGAA | 1 cut(s) | 1718 |
| BstC8I | GCNNGC | 6 cut(s) | 487, 929, 971, 1141, 1341, 1485 |
| BstDSI | CCRYGG | 2 cut(s) | 45, 439 |
| BstF5I | GGATG | 4 cut(s) | 55, 469, 536, 1450 |
| BstFNI | CGCG | 1 cut(s) | 441 |
| BstHHI | GCGC | 1 cut(s) | 1535 |
| BstKTI | GATC | 7 cut(s) | 156, 420, 455, 556, 591, 997, 1586 |
| BstMAI | GTCTC | 2 cut(s) | 607, 1242 |
| BstMBI | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 69, 167, 329, 495, 975, 1186, 1195, 1743 |
| BstNI | CCWGG | 3 cut(s) | 528, 1264, 1526 |
| BstNSI | RCATGY | 6 cut(s) | 465, 489, 931, 1343, 1737, 1744 |
| BstSCI | CCNGG | 5 cut(s) | 526, 688, 1262, 1496, 1524 |
| BstSFI | CTRYAG | 2 cut(s) | 805, 1424 |
| BstSLI | GKGCMC | 1 cut(s) | 944 |
| BstSNI | TACGTA | 1 cut(s) | 1707 |
| BstUI | CGCG | 1 cut(s) | 441 |
| BstV1I | GCAGC | 8 cut(s) | 111, 223, 253, 445, 556, 1055, 1279, 1620 |
| BstV2I | GAAGAC | 1 cut(s) | 674 |
| BstX2I | RGATCY | 1 cut(s) | 417 |
| BstYI | RGATCY | 1 cut(s) | 417 |
| BsuI | GTATCC | 1 cut(s) | 858 |
| BsuRI | GGCC | 3 cut(s) | 904, 1449, 1548 |
| BtgI | CCRYGG | 2 cut(s) | 45, 439 |
| BtgZI | GCGATG | 1 cut(s) | 534 |
| BtrI | CACGTC | 1 cut(s) | 939 |
| BtsCI | GGATG | 4 cut(s) | 55, 469, 536, 1450 |
| BtsI | GCAGTG | 1 cut(s) | 1585 |
| BtsIMutI | CAGTG | 5 cut(s) | 384, 810, 844, 1412, 1585 |
| BveI | ACCTGC | 1 cut(s) | 1332 |
| Cac8I | GCNNGC | 6 cut(s) | 487, 929, 971, 1141, 1341, 1485 |
| CfoI | GCGC | 1 cut(s) | 1535 |
| Cfr13I | GGNCC | 3 cut(s) | 524, 1448, 1689 |
| Cfr42I | CCGCGG | 1 cut(s) | 442 |
| CseI | GACGC | 2 cut(s) | 35, 203 |
| CsiI | ACCWGGT | 1 cut(s) | 1524 |
| Csp6I | GTAC | 7 cut(s) | 625, 634, 777, 1191, 1363, 1699, 1704 |
| CviQI | GTAC | 7 cut(s) | 625, 634, 777, 1191, 1363, 1699, 1704 |
| DpnI | GATC | 7 cut(s) | 155, 419, 454, 555, 590, 996, 1585 |
| DpnII | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 110, 116 |
| DriI | GACNNNNNGTC | 1 cut(s) | 40 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 110, 116 |
| Eam1104I | CTCTTC | 1 cut(s) | 1078 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 40 |
| EarI | CTCTTC | 1 cut(s) | 1078 |
| Eco105I | TACGTA | 1 cut(s) | 1707 |
| Eco130I | CCWWGG | 3 cut(s) | 45, 919, 979 |
| Eco31I | GGTCTC | 1 cut(s) | 607 |
| Eco47I | GGWCC | 2 cut(s) | 524, 1689 |
| EcoRI | GAATTC | 1 cut(s) | 1099 |
| EcoRII | CCWGG | 3 cut(s) | 526, 1262, 1524 |
| EcoT14I | CCWWGG | 3 cut(s) | 45, 919, 979 |
| ErhI | CCWWGG | 3 cut(s) | 45, 919, 979 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 253, 285 |
| FauNDI | CATATG | 1 cut(s) | 1200 |
| FbaI | TGATCA | 1 cut(s) | 588 |
| FblI | GTMKAC | 1 cut(s) | 1671 |
| Fnu4HI | GCNGC | 9 cut(s) | 100, 212, 267, 459, 570, 902, 1044, 1268, 1609 |
| FokI | GGATG | 4 cut(s) | 62, 456, 543, 1457 |
| Fsp4HI | GCNGC | 9 cut(s) | 100, 212, 267, 459, 570, 902, 1044, 1268, 1609 |
| FspBI | CTAG | 5 cut(s) | 162, 869, 1140, 1484, 1641 |
| GlaI | GCGC | 1 cut(s) | 1534 |
| GluI | GCNGC | 9 cut(s) | 100, 212, 267, 459, 570, 902, 1044, 1268, 1609 |
| GsaI | CCCAGC | 1 cut(s) | 493 |
| GsuI | CTGGAG | 2 cut(s) | 1127, 1642 |
| HaeIII | GGCC | 3 cut(s) | 904, 1449, 1548 |
| HapII | CCGG | 3 cut(s) | 619, 689, 1497 |
| HgaI | GACGC | 2 cut(s) | 35, 203 |
| HhaI | GCGC | 1 cut(s) | 1535 |
| Hin1I | GRCGYC | 3 cut(s) | 27, 36, 111 |
| Hin6I | GCGC | 1 cut(s) | 1533 |
| HinP1I | GCGC | 1 cut(s) | 1533 |
| HindIII | AAGCTT | 1 cut(s) | 1208 |
| HinfI | GANTC | 9 cut(s) | 5, 41, 144, 197, 382, 845, 1235, 1382, 1562 |
| HpaII | CCGG | 3 cut(s) | 619, 689, 1497 |
| HphI | GGTGA | 6 cut(s) | 382, 428, 731, 1013, 1385, 1513 |
| Hpy166II | GTNNAC | 6 cut(s) | 802, 942, 1229, 1561, 1672, 1689 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 202, 452, 607, 850, 994, 1555 |
| Hpy188III | TCNNGA | 7 cut(s) | 148, 190, 218, 261, 399, 551, 581 |
| Hpy8I | GTNNAC | 6 cut(s) | 802, 942, 1229, 1561, 1672, 1689 |
| HpyAV | CCTTC | 4 cut(s) | 187, 488, 647, 1411 |
| HpyCH4III | ACNGT | 7 cut(s) | 247, 806, 814, 839, 1195, 1703, 1761 |
| HpyCH4IV | ACGT | 6 cut(s) | 36, 111, 509, 938, 1132, 1706 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 69, 167, 329, 495, 975, 1186, 1195, 1743 |
| HpySE526I | ACGT | 6 cut(s) | 36, 111, 509, 938, 1132, 1706 |
| Hsp92I | GRCGYC | 3 cut(s) | 27, 36, 111 |
| HspAI | GCGC | 1 cut(s) | 1533 |
| KpnI | GGTACC | 1 cut(s) | 637 |
| Ksp22I | TGATCA | 1 cut(s) | 588 |
| KspI | CCGCGG | 1 cut(s) | 442 |
| Kzo9I | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| LmnI | GCTCC | 3 cut(s) | 691, 1420, 1661 |
| Lsp1109I | GCAGC | 8 cut(s) | 111, 223, 253, 445, 556, 1055, 1279, 1620 |
| LweI | GCATC | 3 cut(s) | 456, 1189, 1249 |
| MabI | ACCWGGT | 1 cut(s) | 1524 |
| MaeI | CTAG | 5 cut(s) | 162, 869, 1140, 1484, 1641 |
| MaeII | ACGT | 6 cut(s) | 36, 111, 509, 938, 1132, 1706 |
| MaeIII | GTNAC | 4 cut(s) | 287, 1028, 1214, 1501 |
| MalI | GATC | 7 cut(s) | 155, 419, 454, 555, 590, 996, 1585 |
| MboI | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| MboII | GAAGA | 9 cut(s) | 233, 236, 350, 623, 632, 679, 844, 1092, 1095 |
| MfeI | CAATTG | 1 cut(s) | 1148 |
| MflI | RGATCY | 1 cut(s) | 417 |
| MhlI | GDGCHC | 1 cut(s) | 944 |
| MlyI | GAGTC | 4 cut(s) | 50, 854, 1244, 1556 |
| MroXI | GAANNNNTTC | 2 cut(s) | 432, 1398 |
| MseI | TTAA | 3 cut(s) | 368, 536, 708 |
| MslI | CAYNNNNRTG | 5 cut(s) | 932, 1125, 1338, 1407, 1682 |
| MspA1I | CMGCKG | 2 cut(s) | 441, 458 |
| MspI | CCGG | 3 cut(s) | 619, 689, 1497 |
| MspR9I | CCNGG | 5 cut(s) | 528, 690, 1264, 1498, 1526 |
| MunI | CAATTG | 1 cut(s) | 1148 |
| Mva1269I | GAATGC | 1 cut(s) | 1723 |
| MvaI | CCWGG | 3 cut(s) | 528, 1264, 1526 |
| MvnI | CGCG | 1 cut(s) | 441 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 69, 167, 329, 495, 975, 1186, 1195, 1743 |
| NciI | CCSGG | 2 cut(s) | 690, 1498 |
| NcoI | CCATGG | 1 cut(s) | 45 |
| NdeI | CATATG | 1 cut(s) | 1200 |
| NdeII | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| NheI | GCTAGC | 2 cut(s) | 1139, 1483 |
| NlaIV | GGNNCC | 2 cut(s) | 635, 1657 |
| NmuCI | GTSAC | 2 cut(s) | 1214, 1501 |
| NspI | RCATGY | 6 cut(s) | 465, 489, 931, 1343, 1737, 1744 |
| NspV | TTCGAA | 1 cut(s) | 1718 |
| PaeI | GCATGC | 3 cut(s) | 489, 931, 1343 |
| PciI | ACATGT | 1 cut(s) | 1740 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 21, 30, 33, 102, 111, 117, 126 |
| PctI | GAATGC | 1 cut(s) | 1723 |
| PdmI | GAANNNNTTC | 2 cut(s) | 432, 1398 |
| PfeI | GAWTC | 4 cut(s) | 144, 197, 382, 1382 |
| PflFI | GACNNNGTC | 1 cut(s) | 110 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 563 |
| PfoI | TCCNGGA | 1 cut(s) | 526 |
| PkrI | GCNGC | 9 cut(s) | 101, 213, 268, 460, 571, 903, 1045, 1269, 1610 |
| PleI | GAGTC | 4 cut(s) | 49, 853, 1243, 1556 |
| PpsI | GAGTC | 4 cut(s) | 49, 853, 1243, 1556 |
| Ppu21I | YACGTR | 1 cut(s) | 1707 |
| PscI | ACATGT | 1 cut(s) | 1740 |
| Psp1406I | AACGTT | 1 cut(s) | 1132 |
| Psp6I | CCWGG | 3 cut(s) | 526, 1262, 1524 |
| PspFI | CCCAGC | 1 cut(s) | 489 |
| PspGI | CCWGG | 3 cut(s) | 526, 1262, 1524 |
| PspN4I | GGNNCC | 2 cut(s) | 635, 1657 |
| PspPI | GGNCC | 3 cut(s) | 524, 1448, 1689 |
| PsuI | RGATCY | 1 cut(s) | 417 |
| PsyI | GACNNNGTC | 1 cut(s) | 110 |
| PvuII | CAGCTG | 1 cut(s) | 458 |
| RsaI | GTAC | 7 cut(s) | 626, 635, 778, 1192, 1364, 1700, 1705 |
| RsaNI | GTAC | 7 cut(s) | 625, 634, 777, 1191, 1363, 1699, 1704 |
| RseI | CAYNNNNRTG | 5 cut(s) | 932, 1125, 1338, 1407, 1682 |
| SacII | CCGCGG | 1 cut(s) | 442 |
| SaqAI | TTAA | 3 cut(s) | 368, 536, 708 |
| SatI | GCNGC | 9 cut(s) | 100, 212, 267, 459, 570, 902, 1044, 1268, 1609 |
| Sau3AI | GATC | 7 cut(s) | 153, 417, 452, 553, 588, 994, 1583 |
| Sau96I | GGNCC | 3 cut(s) | 524, 1448, 1689 |
| ScaI | AGTACT | 3 cut(s) | 626, 1364, 1700 |
| SchI | GAGTC | 4 cut(s) | 50, 854, 1244, 1556 |
| ScrFI | CCNGG | 5 cut(s) | 528, 690, 1264, 1498, 1526 |
| SduI | GDGCHC | 1 cut(s) | 944 |
| SexAI | ACCWGGT | 1 cut(s) | 1524 |
| SfaNI | GCATC | 3 cut(s) | 456, 1189, 1249 |
| SfcI | CTRYAG | 2 cut(s) | 805, 1424 |
| Sfr303I | CCGCGG | 1 cut(s) | 442 |
| SfuI | TTCGAA | 1 cut(s) | 1718 |
| SgrBI | CCGCGG | 1 cut(s) | 442 |
| SinI | GGWCC | 2 cut(s) | 524, 1689 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 932, 1125, 1338, 1407, 1682 |
| SmlI | CTYRAG | 2 cut(s) | 1244, 1566 |
| SmoI | CTYRAG | 2 cut(s) | 1244, 1566 |
| SnaBI | TACGTA | 1 cut(s) | 1707 |
| SpeI | ACTAGT | 1 cut(s) | 1640 |
| SphI | GCATGC | 3 cut(s) | 489, 931, 1343 |
| SsiI | CCGC | 6 cut(s) | 439, 441, 901, 1033, 1172, 1442 |
| SspMI | CTAG | 5 cut(s) | 162, 869, 1140, 1484, 1641 |
| StyD4I | CCNGG | 5 cut(s) | 526, 688, 1262, 1496, 1524 |
| StyI | CCWWGG | 3 cut(s) | 45, 919, 979 |
| TaaI | ACNGT | 7 cut(s) | 247, 806, 814, 839, 1195, 1703, 1761 |
| TaiI | ACGT | 6 cut(s) | 39, 114, 512, 941, 1135, 1709 |
| TaqI | TCGA | 9 cut(s) | 39, 114, 120, 156, 166, 1154, 1454, 1645, 1718 |
| TaqII | GACCGA | 2 cut(s) | 566, 633 |
| TatI | WGTACW | 3 cut(s) | 624, 1362, 1698 |
| TauI | GCSGC | 1 cut(s) | 904 |
| TfiI | GAWTC | 4 cut(s) | 144, 197, 382, 1382 |
| Tru1I | TTAA | 3 cut(s) | 368, 536, 708 |
| Tru9I | TTAA | 3 cut(s) | 368, 536, 708 |
| TscAI | CASTG | 5 cut(s) | 384, 817, 844, 1412, 1585 |
| TseFI | GTSAC | 2 cut(s) | 1214, 1501 |
| TseI | GCWGC | 8 cut(s) | 99, 211, 266, 458, 569, 1043, 1267, 1608 |
| Tsp45I | GTSAC | 2 cut(s) | 1214, 1501 |
| TspGWI | ACGGA | 1 cut(s) | 794 |
| TspRI | CASTG | 5 cut(s) | 384, 817, 844, 1412, 1585 |
| Tth111I | GACNNNGTC | 1 cut(s) | 110 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 563 |
| VneI | GTGCAC | 1 cut(s) | 940 |
| VpaK11BI | GGWCC | 2 cut(s) | 524, 1689 |
| XapI | RAATTY | 5 cut(s) | 956, 962, 1099, 1460, 1714 |
| XceI | RCATGY | 6 cut(s) | 465, 489, 931, 1343, 1737, 1744 |
| XmiI | GTMKAC | 1 cut(s) | 1671 |
| XmnI | GAANNNNTTC | 2 cut(s) | 432, 1398 |
| XspI | CTAG | 5 cut(s) | 162, 869, 1140, 1484, 1641 |
| ZraI | GACGTC | 2 cut(s) | 37, 112 |
| ZrmI | AGTACT | 3 cut(s) | 626, 1364, 1700 |