Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005612

Physical Location & Seq

Genomic Coordinates Reverse (-)

36070352 .. 36088894

Gene Structure 18543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008740

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGAGGGGCCGTTACTGGTCCATGATTACATATGATGGGAAGATCTCAGATTGGTGGTCGAGTTCGAGATTTGACATTGACGCACGAGTGATTGGAAGGATCTGGGTTTGGTGGAGCACTAACCTGATTTTGATTCTGAATCACGTCAAGACTGGTGGCGTCGGTGGTGGAAACCGGATTCGAGTGCACGGAGCCGGGATTGGTTTTTTTCGGCGAAGGACGGCGGCGCATTGGCTGGGGTCGAGGTTAAGGCAGATCTGGGTGCCCAGAGAGAATTTGGGTGCCCACCTGGGCCTTTTTTTGTTTGGACTACCCACGAATAATTACATCGTCTTGAAGGACTTGGATATAAAGGAACGCCAGGAAGATGATATTACCAGTGTATCTTCTGTGCTGTCCATATCAAGAGCTGCTTCAACCATTTTGCTTCGCTACTATAATTGGAATGTTAGTGAAGTGCATGAAGCATGGTTTGCAGATGAAGAGAAAGTCCGGAAAACTGTAGGCTTGTTACCTGGGCCAGTTGTTCAGTTTGTGAAGTCAAGAGAACTGATGTGTGGGATCTGTTTTGAAGCCTTTCCACGTAGTAGGCTAAAATCAGCAGATTGTGGTCATCCTTTCTGTTTTGAATGTTGGGAAGGCTACATTAGAACATCCGTCAACGATGGTCCTGGATGTTTGATGCTGAGATGTCCTGATCCATCTTGTGGTGCCGCTGTTGGTCAAGATATGATTAATATATTTGCCTGTGATGATGATAAGTGCAAGTACTCTAAGTACCTGCTTAGGTCTTTTGTTGAAGACAACAAGAAGACCAAGTGGTGTCCAGCTCCGGGTTGTGAGCATGCTGTTAATTATGTTGGAGATAATGAAAATTATGATGTTTCTTGCCTCTGTTCATACGACTTCTGCTGGAATTGTACGGAGGAAACCCATCGTCCTGTGGACTGTAACACTGTAAAGTTATGGATCTTGAAGAACAGTGCTGAATCTGAAAACATGAACTGGATATTAGCCAATTCCAAGCCATGTCCAAAGTGCAAGCGACCGATTGAAAAAAACCAAGGGTGTATGCACATGACATGCTCACCAGCTTGTAAATTTGAATTTTGCTGGCTATGCCTCGGTGCATGGTCAGACCATGGTGAGAGGACAGGCGGTTTCTATGCTTGTAATCGCTATGAGGCAGCAAAGCAAGAGGGAGTTTATGATGAGGCTGAGAGAAGAAGAGAAATGGCAAAGAATTCTTTGGAGAGGTACACTCATTATTATGAACGTTGGGCAAGCAATCAATCGTCAAGGCAGAAAGCTCTTGTTGATTTACATCAAATGCAAACTGTCAATATGGAGAAGCTGAGTGAGATACAATGTCAACCTGAGTCTCAGCTCAAGTTCTTATCTGATGCCTGGCAACAGATTGTTGAATGTAGGAGAGTGCTGAAATGGACTTATGCATATGGATACTACCTAACTGAGCATGAGAATGCTAAGAAGCAGTTTTTTGAGTACTTGCAAGGTGAGGCAGAGTCTGGGCTGGAAAGGCTTCATCAATGTGCAGAGAAGGAGCTACTACCATTCCTCAATGCCGATGGCCCATCACGAGAATTCATTGAATTCCATACGAAACTAGCAGGACTGACTGCGGTGACTAAATCCTACTTCGAGAATCTGGTGAGGGCATTGGAGAATCACCTATCAGATGTGGACTGTCACCGAGCTGGCAGTCTGGCAACAAGCTCAAAAAATGGAACCAGCAAAGGAAAAGGTGGCAGAGGAAAGGAAACCAGTCGAGCGGGTGGCTCCAGCAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

605

Amino Acids

69.11

Weight (kDa)

8.13

Isoelectric Point (pI)

48.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	120 - 158	9.5e-09	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	256 - 317	1.1e-14	IBR domain, a half RING-finger domain
IBR	PF01485	335 - 381	1.4e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	339 - 379	1.1e-14	IBR domain
IBR_2	PF22605	340 - 379	4.2e-13	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05890 AT1G05890 AT2G31510 AT2G31510 AT2G31510
fragaria_vesca	FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130
malus_domestica	MD04G1007200.v1.1 MD13G1275700.v1.1
prunus_persica	Prupe.1G191400_v2.0.a1
pyrus_communis	pycom04g03420 pycom13g28570
rosa_chinensis	RchiOBHm_Chr4g0407061
rosa_laevigata	RLG00000008740
rosa_multiflora	Rmu_sc0000600.1_g000003
rosa_roxburghii	Rroxscaffold_5G00351790
rosa_rugosa	Rorug04G0077500 Rorug04G0077600 Rorug04G0077700
rosa_samantha	Rh4AG142400 Rh4BG140100 Rh4CG148900 Rh4DG136500
rosa_wichuraiana	Rw4G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	789
AccB1I	GGYRCC	3 cut(s)	262, 281, 710
AccB7I	CCANNNNNTGG	1 cut(s)	707
AccBSI	CCGCTC	1 cut(s)	1793
AccIII	TCCGGA	1 cut(s)	492
AciI	CCGC	5 cut(s)	224, 714, 1158, 1643, 1793
AclI	AACGTT	1 cut(s)	1276
AclWI	GGATC	4 cut(s)	107, 569, 692, 977
AcsI	RAATTY	6 cut(s)	274, 1100, 1106, 1243, 1604, 1613
AcyI	GRCGYC	1 cut(s)	159
AfaI	GTAC	5 cut(s)	770, 779, 922, 1259, 1508
AfiI	CCNNNNNNNGG	2 cut(s)	707, 833
AjiI	CACGTC	1 cut(s)	145
AjnI	CCWGG	5 cut(s)	288, 360, 514, 670, 1406
AluBI	AGCT	9 cut(s)	410, 830, 1094, 1310, 1354, 1387, 1567, 1718, 1737
AluI	AGCT	9 cut(s)	410, 830, 1094, 1310, 1354, 1387, 1567, 1718, 1737
Alw21I	GWGCWC	2 cut(s)	119, 189
Alw26I	GTCTC	1 cut(s)	1386
Alw44I	GTGCAC	1 cut(s)	185
AlwI	GGATC	4 cut(s)	107, 569, 692, 977
AlwNI	CAGNNNCTG	1 cut(s)	1529
Aor13HI	TCCGGA	1 cut(s)	492
AoxI	GGCC	4 cut(s)	7, 292, 518, 1591
ApaLI	GTGCAC	1 cut(s)	185
ApeKI	GCWGC	2 cut(s)	410, 1187
ApoI	RAATTY	6 cut(s)	274, 1100, 1106, 1243, 1604, 1613
AseI	ATTAAT	1 cut(s)	735
Asp700I	GAANNNNTTC	2 cut(s)	576, 1542
AspLEI	GCGC	1 cut(s)	229
AspS9I	GGNCC	6 cut(s)	7, 18, 292, 518, 668, 1592
AsuC2I	CCSGG	2 cut(s)	196, 834
AsuHPI	GGTGA	7 cut(s)	1080, 1157, 1529, 1657, 1682, 1684, 1703
AvaII	GGWCC	2 cut(s)	18, 668
BaeGI	GKGCMC	3 cut(s)	189, 267, 286
BaeI	ACNNNNGTAYC	2 cut(s)	366, 399
BanI	GGYRCC	3 cut(s)	262, 281, 710
BauI	CACGAG	2 cut(s)	84, 1599
BbsI	GAAGAC	2 cut(s)	807, 818
Bbv12I	GWGCWC	2 cut(s)	119, 189
BbvI	GCAGC	2 cut(s)	397, 1199
BccI	CCATC	6 cut(s)	29, 659, 709, 942, 1583, 1603
BceAI	ACGGC	1 cut(s)	237
BciT130I	CCWGG	5 cut(s)	290, 362, 516, 672, 1408
BciVI	GTATCC	1 cut(s)	1454
BcnI	CCSGG	2 cut(s)	196, 834
BcoDI	GTCTC	1 cut(s)	1386
BfaI	CTAG	1 cut(s)	1628
BfmI	CTRYAG	1 cut(s)	501
BfuAI	ACCTGC	1 cut(s)	789
BfuI	GTATCC	1 cut(s)	1454
BglII	AGATCT	2 cut(s)	42, 255
BisI	GCNGC	4 cut(s)	225, 411, 714, 1188
BlsI	GCNGC	4 cut(s)	226, 412, 715, 1189
BmcAI	AGTACT	2 cut(s)	770, 1508
Bme1390I	CCNGG	7 cut(s)	196, 290, 362, 516, 672, 834, 1408
Bme18I	GGWCC	2 cut(s)	18, 668
BmgBI	CACGTC	1 cut(s)	145
BmgT120I	GGNCC	6 cut(s)	7, 18, 292, 518, 668, 1592
BmiI	GGNNCC	7 cut(s)	8, 193, 264, 283, 712, 1750, 1801
BmrFI	CCNGG	7 cut(s)	196, 290, 362, 516, 672, 834, 1408
BmsI	GCATC	2 cut(s)	672, 1393
BpiI	GAAGAC	2 cut(s)	807, 818
BplI	GAGNNNNNCTC	2 cut(s)	1246, 1278
BpmI	CTGGAG	1 cut(s)	1786
Bpu10I	CCTNAGC	1 cut(s)	785
BpuEI	CTTGAG	1 cut(s)	1373
BpuMI	CCSGG	2 cut(s)	196, 834
BsaAI	YACGTR	1 cut(s)	584
BsaBI	GATNNNNATC	1 cut(s)	1323
BsaHI	GRCGYC	1 cut(s)	159
BsaJI	CCNNGG	5 cut(s)	289, 515, 1063, 1123, 1141
BsaWI	WCCGGW	2 cut(s)	174, 492
Bsc4I	CCNNNNNNNGG	2 cut(s)	707, 833
Bse1I	ACTGG	6 cut(s)	20, 157, 378, 521, 1010, 1785
Bse8I	GATNNNNATC	1 cut(s)	1323
BseAI	TCCGGA	1 cut(s)	492
BseBI	CCWGG	5 cut(s)	290, 362, 516, 672, 1408
BseDI	CCNNGG	5 cut(s)	289, 515, 1063, 1123, 1141
BseGI	GGATG	3 cut(s)	613, 653, 680
BseJI	GATNNNNATC	1 cut(s)	1323
BseLI	CCNNNNNNNGG	2 cut(s)	707, 833
BseMII	CTCAG	7 cut(s)	60, 677, 1209, 1346, 1368, 1397, 1464
BseNI	ACTGG	6 cut(s)	20, 157, 378, 521, 1010, 1785
BseSI	GKGCMC	3 cut(s)	189, 267, 286
BseXI	GCAGC	2 cut(s)	397, 1199
BseYI	CCCAGC	1 cut(s)	235
BsgI	GTGCAG	1 cut(s)	1575
Bsh1285I	CGRYCG	1 cut(s)	1049
BshFI	GGCC	4 cut(s)	9, 294, 520, 1593
BshNI	GGYRCC	3 cut(s)	262, 281, 710
BsiEI	CGRYCG	1 cut(s)	1049
BsiHKAI	GWGCWC	2 cut(s)	119, 189
BsiSI	CCGG	4 cut(s)	175, 195, 493, 833
BslI	CCNNNNNNNGG	2 cut(s)	707, 833
BsmAI	GTCTC	1 cut(s)	1386
BsmI	GAATGC	1 cut(s)	1489
BsnI	GGCC	4 cut(s)	9, 294, 520, 1593
Bsp1286I	GDGCHC	4 cut(s)	119, 189, 267, 286
Bsp13I	TCCGGA	1 cut(s)	492
Bsp143I	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
Bsp19I	CCATGG	1 cut(s)	1141
BspACI	CCGC	5 cut(s)	224, 714, 1158, 1643, 1793
BspANI	GGCC	4 cut(s)	9, 294, 520, 1593
BspCNI	CTCAG	7 cut(s)	59, 678, 1210, 1347, 1369, 1396, 1465
BspEI	TCCGGA	1 cut(s)	492
BspLI	GGNNCC	7 cut(s)	8, 193, 264, 283, 712, 1750, 1801
BspMI	ACCTGC	1 cut(s)	789
BspPI	GGATC	4 cut(s)	107, 569, 692, 977
BspT107I	GGYRCC	3 cut(s)	262, 281, 710
BsrBI	CCGCTC	1 cut(s)	1793
BsrI	ACTGG	6 cut(s)	20, 157, 378, 521, 1010, 1785
BssECI	CCNNGG	5 cut(s)	289, 515, 1063, 1123, 1141
BssMI	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
BssNI	GRCGYC	1 cut(s)	159
BssSI	CACGAG	2 cut(s)	84, 1599
BssT1I	CCWWGG	2 cut(s)	1063, 1141
Bst2BI	CACGAG	2 cut(s)	84, 1599
Bst2UI	CCWGG	5 cut(s)	290, 362, 516, 672, 1408
Bst4CI	ACNGT	6 cut(s)	502, 950, 958, 983, 1339, 1709
Bst6I	CTCTTC	2 cut(s)	477, 1222
BstACI	GRCGYC	1 cut(s)	159
BstAPI	GCANNNNNTGC	1 cut(s)	473
BstBAI	YACGTR	1 cut(s)	584
BstC8I	GCNNGC	5 cut(s)	846, 1043, 1115, 1285, 1720
BstDSI	CCRYGG	1 cut(s)	1141
BstF5I	GGATG	3 cut(s)	613, 653, 680
BstHHI	GCGC	1 cut(s)	229
BstKTI	GATC	6 cut(s)	45, 102, 258, 564, 700, 972
BstMAI	GTCTC	1 cut(s)	1386
BstMBI	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
BstMCI	CGRYCG	1 cut(s)	1049
BstMWI	GCNNNNNNNGC	3 cut(s)	473, 1119, 1540
BstNI	CCWGG	5 cut(s)	290, 362, 516, 672, 1408
BstNSI	RCATGY	2 cut(s)	848, 1086
BstSCI	CCNGG	7 cut(s)	194, 288, 360, 514, 670, 832, 1406
BstSFI	CTRYAG	1 cut(s)	501
BstSLI	GKGCMC	3 cut(s)	189, 267, 286
BstV1I	GCAGC	2 cut(s)	397, 1199
BstV2I	GAAGAC	2 cut(s)	807, 818
BstX2I	RGATCY	5 cut(s)	42, 99, 255, 561, 969
BstYI	RGATCY	5 cut(s)	42, 99, 255, 561, 969
BsuI	GTATCC	1 cut(s)	1454
BsuRI	GGCC	4 cut(s)	9, 294, 520, 1593
BtgI	CCRYGG	1 cut(s)	1141
BtrI	CACGTC	1 cut(s)	145
BtsCI	GGATG	3 cut(s)	613, 653, 680
BtsIMutI	CAGTG	3 cut(s)	385, 954, 988
BveI	ACCTGC	1 cut(s)	789
Cac8I	GCNNGC	5 cut(s)	846, 1043, 1115, 1285, 1720
CaiI	CAGNNNCTG	1 cut(s)	1529
CfoI	GCGC	1 cut(s)	229
Cfr13I	GGNCC	6 cut(s)	7, 18, 292, 518, 668, 1592
CseI	GACGC	2 cut(s)	89, 148
Csp6I	GTAC	5 cut(s)	769, 778, 921, 1258, 1507
CspCI	CAANNNNNGTGG	2 cut(s)	136, 171
CviQI	GTAC	5 cut(s)	769, 778, 921, 1258, 1507
DpnI	GATC	6 cut(s)	44, 101, 257, 563, 699, 971
DpnII	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
Eam1104I	CTCTTC	2 cut(s)	477, 1222
EarI	CTCTTC	2 cut(s)	477, 1222
Eco130I	CCWWGG	2 cut(s)	1063, 1141
Eco47I	GGWCC	2 cut(s)	18, 668
EcoRI	GAATTC	3 cut(s)	1243, 1604, 1613
EcoRII	CCWGG	5 cut(s)	288, 360, 514, 670, 1406
EcoT14I	CCWWGG	2 cut(s)	1063, 1141
EcoT22I	ATGCAT	1 cut(s)	1456
ErhI	CCWWGG	2 cut(s)	1063, 1141
FalI	AAGNNNNNCTT	2 cut(s)	397, 429
FauI	CCCGC	1 cut(s)	1786
FauNDI	CATATG	2 cut(s)	31, 1456
Fnu4HI	GCNGC	4 cut(s)	225, 411, 714, 1188
FokI	GGATG	3 cut(s)	600, 640, 687
Fsp4HI	GCNGC	4 cut(s)	225, 411, 714, 1188
FspBI	CTAG	1 cut(s)	1628
GlaI	GCGC	1 cut(s)	228
GluI	GCNGC	4 cut(s)	225, 411, 714, 1188
GsaI	CCCAGC	1 cut(s)	239
GsuI	CTGGAG	1 cut(s)	1786
HaeIII	GGCC	4 cut(s)	9, 294, 520, 1593
HapII	CCGG	4 cut(s)	175, 195, 493, 833
HgaI	GACGC	2 cut(s)	89, 148
HhaI	GCGC	1 cut(s)	229
Hin1I	GRCGYC	1 cut(s)	159
Hin6I	GCGC	1 cut(s)	227
HinP1I	GCGC	1 cut(s)	227
HincII	GTYRAC	2 cut(s)	661, 1373
HindII	GTYRAC	2 cut(s)	661, 1373
HinfI	GANTC	8 cut(s)	133, 139, 178, 989, 1379, 1526, 1666, 1687
HpaII	CCGG	4 cut(s)	175, 195, 493, 833
HphI	GGTGA	7 cut(s)	1080, 1157, 1529, 1657, 1682, 1684, 1703
Hpy166II	GTNNAC	6 cut(s)	187, 661, 946, 1260, 1373, 1705
Hpy188I	TCNGA	6 cut(s)	49, 138, 994, 1138, 1402, 1699
Hpy8I	GTNNAC	6 cut(s)	187, 661, 946, 1260, 1373, 1705
Hpy99I	CGWCG	1 cut(s)	164
HpyAV	CCTTC	5 cut(s)	90, 210, 331, 632, 1555
HpyCH4III	ACNGT	6 cut(s)	502, 950, 958, 983, 1339, 1709
HpyCH4IV	ACGT	3 cut(s)	144, 583, 1276
HpyF10VI	GCNNNNNNNGC	3 cut(s)	473, 1119, 1540
HpySE526I	ACGT	3 cut(s)	144, 583, 1276
Hsp92I	GRCGYC	1 cut(s)	159
HspAI	GCGC	1 cut(s)	227
Kpn2I	TCCGGA	1 cut(s)	492
Kzo9I	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
LmnI	GCTCC	5 cut(s)	114, 191, 835, 1564, 1805
Lsp1109I	GCAGC	2 cut(s)	397, 1199
LweI	GCATC	2 cut(s)	672, 1393
MaeI	CTAG	1 cut(s)	1628
MaeII	ACGT	3 cut(s)	144, 583, 1276
MaeIII	GTNAC	5 cut(s)	11, 510, 950, 1645, 1709
MalI	GATC	6 cut(s)	44, 101, 257, 563, 699, 971
MbiI	CCGCTC	1 cut(s)	1793
MboI	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
MboII	GAAGA	9 cut(s)	52, 377, 378, 494, 812, 823, 988, 1236, 1239
MflI	RGATCY	5 cut(s)	42, 99, 255, 561, 969
MhlI	GDGCHC	4 cut(s)	119, 189, 267, 286
MlyI	GAGTC	2 cut(s)	1388, 1535
MmeI	TCCRAC	1 cut(s)	841
Mph1103I	ATGCAT	1 cut(s)	1456
MroI	TCCGGA	1 cut(s)	492
MroXI	GAANNNNTTC	2 cut(s)	576, 1542
MseI	TTAA	4 cut(s)	248, 735, 852, 1813
MslI	CAYNNNNRTG	3 cut(s)	1269, 1482, 1551
MspA1I	CMGCKG	1 cut(s)	716
MspI	CCGG	4 cut(s)	175, 195, 493, 833
MspR9I	CCNGG	7 cut(s)	196, 290, 362, 516, 672, 834, 1408
Mva1269I	GAATGC	1 cut(s)	1489
MvaI	CCWGG	5 cut(s)	290, 362, 516, 672, 1408
MwoI	GCNNNNNNNGC	3 cut(s)	473, 1119, 1540
NciI	CCSGG	2 cut(s)	196, 834
NcoI	CCATGG	1 cut(s)	1141
NdeI	CATATG	2 cut(s)	31, 1456
NdeII	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
NlaIV	GGNNCC	7 cut(s)	8, 193, 264, 283, 712, 1750, 1801
NmuCI	GTSAC	2 cut(s)	1645, 1709
NsiI	ATGCAT	1 cut(s)	1456
NspI	RCATGY	2 cut(s)	848, 1086
PaeI	GCATGC	1 cut(s)	848
PctI	GAATGC	1 cut(s)	1489
PdmI	GAANNNNTTC	2 cut(s)	576, 1542
PfeI	GAWTC	6 cut(s)	133, 139, 178, 989, 1666, 1687
PflMI	CCANNNNNTGG	1 cut(s)	707
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	4 cut(s)	226, 412, 715, 1189
PleI	GAGTC	2 cut(s)	1387, 1534
PpsI	GAGTC	2 cut(s)	1387, 1534
Ppu21I	YACGTR	1 cut(s)	584
PshBI	ATTAAT	1 cut(s)	735
Psp1406I	AACGTT	1 cut(s)	1276
Psp6I	CCWGG	5 cut(s)	288, 360, 514, 670, 1406
PspFI	CCCAGC	1 cut(s)	235
PspGI	CCWGG	5 cut(s)	288, 360, 514, 670, 1406
PspN4I	GGNNCC	7 cut(s)	8, 193, 264, 283, 712, 1750, 1801
PspPI	GGNCC	6 cut(s)	7, 18, 292, 518, 668, 1592
PstNI	CAGNNNCTG	1 cut(s)	1529
PsuI	RGATCY	5 cut(s)	42, 99, 255, 561, 969
RsaI	GTAC	5 cut(s)	770, 779, 922, 1259, 1508
RsaNI	GTAC	5 cut(s)	769, 778, 921, 1258, 1507
RseI	CAYNNNNRTG	3 cut(s)	1269, 1482, 1551
SaqAI	TTAA	4 cut(s)	248, 735, 852, 1813
SatI	GCNGC	4 cut(s)	225, 411, 714, 1188
Sau3AI	GATC	6 cut(s)	42, 99, 255, 561, 697, 969
Sau96I	GGNCC	6 cut(s)	7, 18, 292, 518, 668, 1592
ScaI	AGTACT	2 cut(s)	770, 1508
SchI	GAGTC	2 cut(s)	1388, 1535
ScrFI	CCNGG	7 cut(s)	196, 290, 362, 516, 672, 834, 1408
SduI	GDGCHC	4 cut(s)	119, 189, 267, 286
SfaNI	GCATC	2 cut(s)	672, 1393
SfcI	CTRYAG	1 cut(s)	501
SinI	GGWCC	2 cut(s)	18, 668
SmiMI	CAYNNNNRTG	3 cut(s)	1269, 1482, 1551
SmlI	CTYRAG	1 cut(s)	1388
SmoI	CTYRAG	1 cut(s)	1388
SphI	GCATGC	1 cut(s)	848
SsiI	CCGC	5 cut(s)	224, 714, 1158, 1643, 1793
SspMI	CTAG	1 cut(s)	1628
StyD4I	CCNGG	7 cut(s)	194, 288, 360, 514, 670, 832, 1406
StyI	CCWWGG	2 cut(s)	1063, 1141
TaaI	ACNGT	6 cut(s)	502, 950, 958, 983, 1339, 1709
TaiI	ACGT	3 cut(s)	147, 586, 1279
TaqI	TCGA	6 cut(s)	59, 65, 181, 242, 1662, 1789
TaqII	GACCGA	1 cut(s)	1063
TatI	WGTACW	2 cut(s)	768, 1506
TauI	GCSGC	2 cut(s)	227, 716
TfiI	GAWTC	6 cut(s)	133, 139, 178, 989, 1666, 1687
Tru1I	TTAA	4 cut(s)	248, 735, 852, 1813
Tru9I	TTAA	4 cut(s)	248, 735, 852, 1813
TscAI	CASTG	3 cut(s)	385, 961, 988
TseFI	GTSAC	2 cut(s)	1645, 1709
TseI	GCWGC	2 cut(s)	410, 1187
Tsp45I	GTSAC	2 cut(s)	1645, 1709
TspDTI	ATGAA	8 cut(s)	477, 495, 885, 888, 1016, 1287, 1535, 1597
TspGWI	ACGGA	3 cut(s)	204, 646, 938
TspRI	CASTG	3 cut(s)	385, 961, 988
Van91I	CCANNNNNTGG	1 cut(s)	707
VneI	GTGCAC	1 cut(s)	185
VpaK11BI	GGWCC	2 cut(s)	18, 668
VspI	ATTAAT	1 cut(s)	735
XapI	RAATTY	6 cut(s)	274, 1100, 1106, 1243, 1604, 1613
XceI	RCATGY	2 cut(s)	848, 1086
XcmI	CCANNNNNNNNNTGG	1 cut(s)	274
XmnI	GAANNNNTTC	2 cut(s)	576, 1542
XspI	CTAG	1 cut(s)	1628
ZrmI	AGTACT	2 cut(s)	770, 1508
Zsp2I	ATGCAT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.