MD14G1111500.v1.1

1-aminocyclopropane-1-carboxylate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
17953030 .. 17955957
2928 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1111500.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGGGGTTTACTTTGAGCAACCAACAGCAACTGTTGTCTAAGATAGCAACAAGCAATGGCCACGGCGAAAACTCTCCATACTTTGATGGCTGGAAGGCTTATGACAGTGATCCTTTTCACCCCACCAAGAACCCTAATGGGGTTATCCAGATGGGTCTTGCAGAAAATGAAATGTGTTTTGATTTGATCCAAGAGTGGGTTCTGAACAATCCAGAAGCCTCCATTTGCACAGCAGCAGGAGTAAATGAATTCAAGGACATAGCCATCTTTCAGGATTATCATGGATTGCCAGTATTCAGAAATGCTGTTGCAAACTTTATGGGAAAAGTGAGAGGAAATCGTGTCACATTTGACGCCGACCGGATTGTTATGAGCGGAGGAGCTACCGGAGCTCATGAGACGATCGCTTTTTGCTTGGCTGATCCTGGGGATGCATTTCTGGTGCCTGTTCCTTATTATCCAGGTTTTGACCGAGATTTGGGGTGGCGAACGGGAGTGCAACTGATGCCAGTTGCCTGTGACAGCTCCAACAATTTCAAAGTCACCAGAGCAGCTTTGGAAGCTGCCTATGAGAAGGCTCAGAAGGCAAACATCAGAGTAAAGGGCTTGCTCATTACCAACCCCTCAAATCCGTTGGGCACTGTCCTTGACAGAGACACCCTCAGAAGTCTAGTGACATTCATCAACGAAAAGAAAATCCACCTAGTGTGCGATGAAATCTACGCTGCCACCGTGTTCAGCCAGCCAAGTTTCATAAGCATAGCCGAGATCATAGAGGAAAACATCGAATGCAACCGCAACCTTATTCACATTGTGTACAGTCTTTCTAAGGACATGGGGTTCCCTGGCTTCAGAGTTGGCATTGTATATTCCTACAATGATGATGTCGTTAATTGTGCGCGAAAGATGTCAAGTTTTGGATTGGTTTCGACACAAACTCAGCATCTGATTGCATCAATGTTGTCAGACAATGAATTTGTCGAGAGGTTTATAGCACAAAGTGCTAAAAGGCTAAAAGCAAGGCACATGCGCTTCACAATGGAGCTTGATCAAGTCGGCACAAGCTGCTTGAATAGCAATGGTGGTCTTTTCGTATGGATGGACTTGCGTAGGCTGCTCAAGGAGCAGACGTTCGAAGCTGAGATGGTGTTGTGGCACACGATAATCCATGAAGTTAAGCTCAATGTGTCACCAGGTTCGTCGTTTCATTGCCCCGAGCCAGGTTGGTTCAGAGTTTGCTTTGCCAACATGGATGACAAGACCATGGAAATTGCTTTGACACGAATCCGAAACTTTGTGGCTCAATACAAGGAGCCAATTGCACCGAGGAAGAACAACAGGTACTGGCAAAGCAACCTGAGGCTGAGCTTTCAGTCTCGGCGAATGGATGACATCATGATGTCTCCGTGCATGATGTCACCTCATTCACCGATACCTCAATCGCCTCTTGTTCGAGCCACTTAG

Protein Analysis

488

Amino Acids

54.88

Weight (kDa)

6.47

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 49 - 429 1.3e-107 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012840)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 442
AccBSI CCGCTC 1 cut(s) 375
AccII CGCG 1 cut(s) 901
AciI CCGC 2 cut(s) 375, 796
AclWI GGATC 3 cut(s) 104, 181, 416
AcoI YGGCCR 1 cut(s) 58
AcsI RAATTY 2 cut(s) 248, 974
AcuI CTGAAG 1 cut(s) 835
AcyI GRCGYC 1 cut(s) 354
AdeI CACNNNGTG 3 cut(s) 706, 814, 1001
AfaI GTAC 2 cut(s) 818, 1343
AfiI CCNNNNNNNGG 4 cut(s) 139, 196, 478, 1220
AgsI TTSAA 3 cut(s) 253, 538, 1072
AjnI CCWGG 5 cut(s) 424, 460, 844, 1192, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
AloI GAACNNNNNNTCC 4 cut(s) 824, 856, 1115, 1147
Alw21I GWGCWC 1 cut(s) 394
Alw26I GTCTC 4 cut(s) 392, 648, 1380, 1407
AlwI GGATC 3 cut(s) 104, 181, 416
AlwNI CAGNNNCTG 3 cut(s) 31, 946, 1344
Ama87I CYCGRG 1 cut(s) 1214
AoxI GGCC 1 cut(s) 58
ApeKI GCWGC 6 cut(s) 233, 551, 563, 725, 1065, 1114
ApoI RAATTY 2 cut(s) 248, 974
ArsI GACNNNNNNTTYG 2 cut(s) 959, 991
AspLEI GCGC 2 cut(s) 901, 1032
AsuHPI GGTGA 5 cut(s) 110, 535, 1182, 1410, 1419
AsuII TTCGAA 1 cut(s) 1134
AvaI CYCGRG 1 cut(s) 1214
AxyI CCTNAGG 1 cut(s) 1358
BaeGI GKGCMC 1 cut(s) 641
BalI TGGCCA 1 cut(s) 60
BanI GGYRCC 1 cut(s) 442
BanII GRGCYC 1 cut(s) 394
Bbv12I GWGCWC 1 cut(s) 394
BbvI GCAGC 6 cut(s) 245, 550, 563, 712, 1052, 1101
BccI CCATC 5 cut(s) 80, 145, 272, 1093, 1138
BceAI ACGGC 1 cut(s) 79
BciT130I CCWGG 5 cut(s) 426, 462, 846, 1194, 1221
BclI TGATCA 1 cut(s) 1048
BcoDI GTCTC 4 cut(s) 392, 648, 1380, 1407
BfaI CTAG 2 cut(s) 671, 704
BisI GCNGC 6 cut(s) 234, 552, 564, 726, 1066, 1115
BlpI GCTNAGC 1 cut(s) 1364
BlsI GCNGC 6 cut(s) 235, 553, 565, 727, 1067, 1116
Bme1390I CCNGG 5 cut(s) 426, 462, 846, 1194, 1221
BmeT110I CYCGRG 1 cut(s) 1214
BmiI GGNNCC 3 cut(s) 444, 842, 1314
BmrFI CCNGG 5 cut(s) 426, 462, 846, 1194, 1221
BmsI GCATC 4 cut(s) 421, 495, 952, 962
BplI GAGNNNNNCTC 2 cut(s) 645, 677
Bpu1102I GCTNAGC 1 cut(s) 1364
Bpu14I TTCGAA 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 1103
BsaHI GRCGYC 1 cut(s) 354
BsaJI CCNNGG 5 cut(s) 61, 425, 844, 1263, 1325
BsaWI WCCGGW 2 cut(s) 360, 386
BsaXI ACNNNNNCTCC 2 cut(s) 1115, 1145
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 196, 478, 1220
Bse1I ACTGG 3 cut(s) 290, 509, 1349
Bse21I CCTNAGG 1 cut(s) 1358
Bse3DI GCAATG 3 cut(s) 61, 1084, 1207
BseBI CCWGG 5 cut(s) 426, 462, 846, 1194, 1221
BseDI CCNNGG 5 cut(s) 61, 425, 844, 1263, 1325
BseGI GGATG 4 cut(s) 436, 1104, 1258, 1393
BseLI CCNNNNNNNGG 4 cut(s) 139, 196, 478, 1220
BseMI GCAATG 3 cut(s) 61, 1084, 1207
BseMII CTCAG 6 cut(s) 593, 676, 953, 1131, 1349, 1355
BseNI ACTGG 3 cut(s) 290, 509, 1349
BseRI GAGGAG 1 cut(s) 393
BseSI GKGCMC 1 cut(s) 641
BseXI GCAGC 6 cut(s) 245, 550, 563, 712, 1052, 1101
Bsh1236I CGCG 1 cut(s) 901
Bsh1285I CGRYCG 2 cut(s) 361, 405
BshFI GGCC 1 cut(s) 60
BshNI GGYRCC 1 cut(s) 442
BsiEI CGRYCG 2 cut(s) 361, 405
BsiHKAI GWGCWC 1 cut(s) 394
BsiHKCI CYCGRG 1 cut(s) 1214
BsiSI CCGG 2 cut(s) 361, 387
BslI CCNNNNNNNGG 4 cut(s) 139, 196, 478, 1220
BsmAI GTCTC 4 cut(s) 392, 648, 1380, 1407
BsmBI CGTCTC 1 cut(s) 392
BsmI GAATGC 1 cut(s) 794
BsnI GGCC 1 cut(s) 60
BsoBI CYCGRG 1 cut(s) 1214
Bsp119I TTCGAA 1 cut(s) 1134
Bsp1286I GDGCHC 2 cut(s) 394, 641
Bsp1407I TGTACA 1 cut(s) 816
Bsp143I GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
Bsp1720I GCTNAGC 1 cut(s) 1364
Bsp19I CCATGG 1 cut(s) 1263
BspACI CCGC 2 cut(s) 375, 796
BspANI GGCC 1 cut(s) 60
BspCNI CTCAG 6 cut(s) 592, 675, 952, 1132, 1350, 1356
BspFNI CGCG 1 cut(s) 901
BspHI TCATGA 2 cut(s) 394, 1395
BspLI GGNNCC 3 cut(s) 444, 842, 1314
BspPI GGATC 3 cut(s) 104, 181, 416
BspT104I TTCGAA 1 cut(s) 1134
BspT107I GGYRCC 1 cut(s) 442
BsrBI CCGCTC 1 cut(s) 375
BsrDI GCAATG 3 cut(s) 61, 1084, 1207
BsrGI TGTACA 1 cut(s) 816
BsrI ACTGG 3 cut(s) 290, 509, 1349
BssECI CCNNGG 5 cut(s) 61, 425, 844, 1263, 1325
BssMI GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
BssNI GRCGYC 1 cut(s) 354
BssT1I CCWWGG 1 cut(s) 1263
Bst2UI CCWGG 5 cut(s) 426, 462, 846, 1194, 1221
Bst4CI ACNGT 5 cut(s) 33, 107, 643, 733, 821
BstACI GRCGYC 1 cut(s) 354
BstAPI GCANNNNNTGC 3 cut(s) 505, 1001, 1065
BstAUI TGTACA 1 cut(s) 816
BstBI TTCGAA 1 cut(s) 1134
BstC8I GCNNGC 2 cut(s) 608, 743
BstDEI CTNAG 9 cut(s) 39, 579, 662, 828, 939, 1140, 1358, 1364, 1461
BstDSI CCRYGG 2 cut(s) 61, 1263
BstF5I GGATG 4 cut(s) 436, 1104, 1258, 1393
BstFNI CGCG 1 cut(s) 901
BstHHI GCGC 2 cut(s) 901, 1032
BstKTI GATC 6 cut(s) 112, 189, 405, 424, 771, 1051
BstMAI GTCTC 4 cut(s) 392, 648, 1380, 1407
BstMBI GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
BstMCI CGRYCG 2 cut(s) 361, 405
BstMWI GCNNNNNNNGC 9 cut(s) 389, 505, 560, 584, 1001, 1065, 1074, 1114, 1123
BstNI CCWGG 5 cut(s) 426, 462, 846, 1194, 1221
BstNSI RCATGY 1 cut(s) 1030
BstSCI CCNGG 5 cut(s) 424, 460, 844, 1192, 1219
BstSLI GKGCMC 1 cut(s) 641
BstUI CGCG 1 cut(s) 901
BstV1I GCAGC 6 cut(s) 245, 550, 563, 712, 1052, 1101
Bsu36I CCTNAGG 1 cut(s) 1358
BsuRI GGCC 1 cut(s) 60
BtgI CCRYGG 2 cut(s) 61, 1263
BtgZI GCGATG 1 cut(s) 726
BtsCI GGATG 4 cut(s) 436, 1104, 1258, 1393
BtsIMutI CAGTG 2 cut(s) 112, 639
Cac8I GCNNGC 2 cut(s) 608, 743
CaiI CAGNNNCTG 3 cut(s) 31, 946, 1344
CciI TCATGA 2 cut(s) 394, 1395
CfoI GCGC 2 cut(s) 901, 1032
CseI GACGC 1 cut(s) 362
CsiI ACCWGGT 1 cut(s) 1192
Csp6I GTAC 2 cut(s) 817, 1342
CviAII CATG 9 cut(s) 281, 395, 835, 1027, 1169, 1249, 1264, 1396, 1411
CviQI GTAC 2 cut(s) 817, 1342
DdeI CTNAG 9 cut(s) 39, 579, 662, 828, 939, 1140, 1358, 1364, 1461
DpnI GATC 6 cut(s) 111, 188, 404, 423, 770, 1050
DpnII GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
DraIII CACNNNGTG 3 cut(s) 706, 814, 1001
EaeI YGGCCR 1 cut(s) 58
Ecl136II GAGCTC 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 1263
Eco24I GRGCYC 1 cut(s) 394
Eco53kI GAGCTC 1 cut(s) 392
Eco57I CTGAAG 1 cut(s) 835
Eco81I CCTNAGG 1 cut(s) 1358
Eco88I CYCGRG 1 cut(s) 1214
EcoICRI GAGCTC 1 cut(s) 392
EcoRI GAATTC 1 cut(s) 248
EcoRII CCWGG 5 cut(s) 424, 460, 844, 1192, 1219
EcoT14I CCWWGG 1 cut(s) 1263
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 1 cut(s) 394
ErhI CCWWGG 1 cut(s) 1263
Esp3I CGTCTC 1 cut(s) 392
FaeI CATG 9 cut(s) 284, 398, 838, 1030, 1172, 1252, 1267, 1399, 1414
FatI CATG 9 cut(s) 280, 394, 834, 1026, 1168, 1248, 1263, 1395, 1410
FbaI TGATCA 1 cut(s) 1048
Fnu4HI GCNGC 6 cut(s) 234, 552, 564, 726, 1066, 1115
FokI GGATG 4 cut(s) 443, 1111, 1265, 1400
FriOI GRGCYC 1 cut(s) 394
Fsp4HI GCNGC 6 cut(s) 234, 552, 564, 726, 1066, 1115
FspBI CTAG 2 cut(s) 671, 704
GlaI GCGC 2 cut(s) 900, 1031
GluI GCNGC 6 cut(s) 234, 552, 564, 726, 1066, 1115
HaeIII GGCC 1 cut(s) 60
HapII CCGG 2 cut(s) 361, 387
HgaI GACGC 1 cut(s) 362
HhaI GCGC 2 cut(s) 901, 1032
Hin1I GRCGYC 1 cut(s) 354
Hin1II CATG 9 cut(s) 284, 398, 838, 1030, 1172, 1252, 1267, 1399, 1414
Hin6I GCGC 2 cut(s) 899, 1030
HinP1I GCGC 2 cut(s) 899, 1030
HinfI GANTC 1 cut(s) 1284
HpaII CCGG 2 cut(s) 361, 387
HphI GGTGA 5 cut(s) 110, 535, 1182, 1410, 1419
Hpy166II GTNNAC 2 cut(s) 9, 817
Hpy188III TCNNGA 6 cut(s) 148, 212, 272, 395, 982, 1396
Hpy8I GTNNAC 2 cut(s) 9, 817
Hpy99I CGWCG 1 cut(s) 1204
HpyAV CCTTC 3 cut(s) 88, 568, 577
HpyCH4III ACNGT 5 cut(s) 33, 107, 643, 733, 821
HpyCH4IV ACGT 1 cut(s) 1130
HpyCH4V TGCA 9 cut(s) 161, 228, 311, 434, 499, 792, 953, 1322, 1410
HpyF10VI GCNNNNNNNGC 9 cut(s) 389, 505, 560, 584, 1001, 1065, 1074, 1114, 1123
HpyF3I CTNAG 9 cut(s) 39, 579, 662, 828, 939, 1140, 1358, 1364, 1461
HpySE526I ACGT 1 cut(s) 1130
Hsp92I GRCGYC 1 cut(s) 354
Hsp92II CATG 9 cut(s) 284, 398, 838, 1030, 1172, 1252, 1267, 1399, 1414
HspAI GCGC 2 cut(s) 899, 1030
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
LmnI GCTCC 6 cut(s) 380, 389, 530, 1042, 1123, 1312
Lsp1109I GCAGC 6 cut(s) 245, 550, 563, 712, 1052, 1101
LweI GCATC 4 cut(s) 421, 495, 952, 962
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 2 cut(s) 671, 704
MaeII ACGT 1 cut(s) 1130
MaeIII GTNAC 6 cut(s) 343, 518, 541, 673, 1188, 1416
MalI GATC 6 cut(s) 111, 188, 404, 423, 770, 1050
MbiI CCGCTC 1 cut(s) 375
MboI GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
MboII GAAGA 1 cut(s) 1342
MfeI CAATTG 1 cut(s) 1317
MhlI GDGCHC 2 cut(s) 394, 641
MlsI TGGCCA 1 cut(s) 60
MluCI AATT 6 cut(s) 248, 532, 892, 974, 1269, 1317
MluNI TGGCCA 1 cut(s) 60
MmeI TCCRAC 1 cut(s) 552
Mox20I TGGCCA 1 cut(s) 60
Mph1103I ATGCAT 1 cut(s) 436
MscI TGGCCA 1 cut(s) 60
MseI TTAA 2 cut(s) 891, 1176
MslI CAYNNNNRTG 1 cut(s) 1397
Msp20I TGGCCA 1 cut(s) 60
MspI CCGG 2 cut(s) 361, 387
MspR9I CCNGG 5 cut(s) 426, 462, 846, 1194, 1221
MunI CAATTG 1 cut(s) 1317
Mva1269I GAATGC 1 cut(s) 794
MvaI CCWGG 5 cut(s) 426, 462, 846, 1194, 1221
MvnI CGCG 1 cut(s) 901
MwoI GCNNNNNNNGC 9 cut(s) 389, 505, 560, 584, 1001, 1065, 1074, 1114, 1123
NcoI CCATGG 1 cut(s) 1263
NdeII GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
NlaIII CATG 9 cut(s) 284, 398, 838, 1030, 1172, 1252, 1267, 1399, 1414
NlaIV GGNNCC 3 cut(s) 444, 842, 1314
NmeAIII GCCGAG 2 cut(s) 790, 1357
NmuCI GTSAC 6 cut(s) 343, 518, 541, 673, 1188, 1416
NsiI ATGCAT 1 cut(s) 436
NspI RCATGY 1 cut(s) 1030
NspV TTCGAA 1 cut(s) 1134
PagI TCATGA 2 cut(s) 394, 1395
PcsI WCGNNNNNNNCGW 1 cut(s) 729
PctI GAATGC 1 cut(s) 794
PfeI GAWTC 1 cut(s) 1284
PkrI GCNGC 6 cut(s) 235, 553, 565, 727, 1067, 1116
Ple19I CGATCG 1 cut(s) 405
Psp124BI GAGCTC 1 cut(s) 394
Psp6I CCWGG 5 cut(s) 424, 460, 844, 1192, 1219
PspGI CCWGG 5 cut(s) 424, 460, 844, 1192, 1219
PspN4I GGNNCC 3 cut(s) 444, 842, 1314
PsrI GAACNNNNNNTAC 2 cut(s) 1325, 1357
PstNI CAGNNNCTG 3 cut(s) 31, 946, 1344
PvuI CGATCG 1 cut(s) 405
RsaI GTAC 2 cut(s) 818, 1343
RsaNI GTAC 2 cut(s) 817, 1342
RseI CAYNNNNRTG 1 cut(s) 1397
SacI GAGCTC 1 cut(s) 394
SaqAI TTAA 2 cut(s) 891, 1176
SatI GCNGC 6 cut(s) 234, 552, 564, 726, 1066, 1115
Sau3AI GATC 6 cut(s) 109, 186, 402, 421, 768, 1048
ScrFI CCNGG 5 cut(s) 426, 462, 846, 1194, 1221
SduI GDGCHC 2 cut(s) 394, 641
SexAI ACCWGGT 1 cut(s) 1192
SfaNI GCATC 4 cut(s) 421, 495, 952, 962
SfuI TTCGAA 1 cut(s) 1134
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
Sse9I AATT 6 cut(s) 248, 532, 892, 974, 1269, 1317
SsiI CCGC 2 cut(s) 375, 796
SspMI CTAG 2 cut(s) 671, 704
SstI GAGCTC 1 cut(s) 394
StyD4I CCNGG 5 cut(s) 424, 460, 844, 1192, 1219
StyI CCWWGG 1 cut(s) 1263
TaaI ACNGT 5 cut(s) 33, 107, 643, 733, 821
TaiI ACGT 1 cut(s) 1133
TaqI TCGA 5 cut(s) 786, 929, 981, 1134, 1453
TaqII GACCGA 1 cut(s) 486
TasI AATT 6 cut(s) 248, 532, 892, 974, 1269, 1317
TatI WGTACW 1 cut(s) 816
TfiI GAWTC 1 cut(s) 1284
Tru1I TTAA 2 cut(s) 891, 1176
Tru9I TTAA 2 cut(s) 891, 1176
TscAI CASTG 2 cut(s) 112, 646
TseFI GTSAC 6 cut(s) 343, 518, 541, 673, 1188, 1416
TseI GCWGC 6 cut(s) 233, 551, 563, 725, 1065, 1114
Tsp45I GTSAC 6 cut(s) 343, 518, 541, 673, 1188, 1416
TspDTI ATGAA 8 cut(s) 183, 261, 670, 729, 742, 987, 1185, 1196
TspGWI ACGGA 2 cut(s) 621, 1395
TspRI CASTG 2 cut(s) 112, 646
XapI RAATTY 2 cut(s) 248, 974
XceI RCATGY 1 cut(s) 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XspI CTAG 2 cut(s) 671, 704
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.