Rh7DG160500

1-aminocyclopropane-1-carboxylate

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
14270754 .. 14273894
3141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG160500.1

Sequence Viewer

Length: 1302 bp
ATGCAGCTTTCTTTTGATTTGATTCAAGAATGGGTTCTGAAAAACCCAGAAGCCTCCATTTGCACTGCACAAGGAGCAAAAGAATTCAAGGACATAGCCATCTTTCAAGACTATCATGGCCTGCCAGAGTTCAGAAATGCTGTTGCAAATTTCATGGGAAAAGTGAGAGGAAATCGAGTCACATTCGACCCTGACCGCATTGTTATGAGCGGCGGAGCAACCGGAGCTCACGAGATGATTGCCTTTTGCTTGGCTGATCCCGGAGAGGCATTTCTGGTTCCCGTTCCTTATTATCCTGGATTCGATAGAGATTTGAGATGGCGAACAGGGGTACAACTTCTTCCAGTTGCTTGTGAAAGCTCCAACAATTTCAAGATCACCAGAGCAGCCTTGGAAGATGCCTATGAGAAAGCCCAAAAGGCCAACATCAGAGTTAAAGGCTTACTCATTACCAACCCCTCAAACCCACTAGGCACAGTCCTAGACAGAGAGACCCTTAAAAGCCTAGTAACTTTCATCAATGAGAAGAATATCCACATAGTCTCTGATGAGATCTATGCTGCCACTGTGTTCACTCAGCCTAGGTTCATCAGCATTGCTGAAATTCTCGAGGAAGAAGAAGTAGAATGCAACCGGGATCTGGTTCACATTGTCTACAGTCTTTCCAAGGACATGGGGTTCCCTGGCTTTAGGGTTGGGATAGTGTACTCATACAATGATGCAGTAGTGAATTGCGCGAGAAAGATGTCGAGTTTCGGGTTGGTTTCTACACAAACTCAGCATCTAATCGCATCGATGCTATCAGACAATGAGTTTGTGGACAGATTCATTGTAGAAAGTGCCAAGAGGTTGAAAGCAAGGCACACGAGATTCACTGTGGGACTTGAGGAACAAGGTACCACTTGTTTGAAGAGCAATGGTGGCTTGTTTGTGTGGATGGACTTGCACAAGCATTTAAAGGAGCAAACTTTTGAAGCAGAGATGGCATTGTGGAGAACCATAATCCATCAAGTTAAGCTCAATGTGTCACCCGGTGTTTCTTTTCATTGCCCCGAACCGGGTTGGTTCAGGGTTTGTTTTGCCAACATGGACGACCAGACTATGGAAGTTGCTTTGGAACGAATCAGAAACTTTGTGCTTCAAGACAAGGATGCTGTGGTAGCAATTAAGAAGAAGAGCTGCTGGCAAAGTAATAAAAAGCTGAGTCTCAGCTTCAAATCCTTCAATTTTCGAATATTGGATGAGGTCAGCATGTCACCGCATTCCCCTATTCCACAGTCACCTCTTGTTCGAGCTACTTAG

Protein Analysis

433

Amino Acids

48.94

Weight (kDa)

6.61

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 4 - 375 2.4e-106 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012840)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 896
AccB1I GGYRCC 1 cut(s) 896
AccB7I CCANNNNNTGG 1 cut(s) 1102
AccBSI CCGCTC 1 cut(s) 210
AccI GTMKAC 1 cut(s) 654
AccII CGCG 1 cut(s) 737
AciI CCGC 4 cut(s) 196, 210, 213, 1259
AclWI GGATC 2 cut(s) 251, 645
AcsI RAATTY 3 cut(s) 83, 148, 603
AdeI CACNNNGTG 1 cut(s) 1034
AfaI GTAC 3 cut(s) 333, 707, 898
AfiI CCNNNNNNNGG 4 cut(s) 640, 1057, 1058, 1102
AjnI CCWGG 2 cut(s) 295, 682
AloI GAACNNNNNNTCC 2 cut(s) 662, 694
AluBI AGCT 8 cut(s) 7, 227, 360, 1018, 1179, 1201, 1212, 1295
AluI AGCT 8 cut(s) 7, 227, 360, 1018, 1179, 1201, 1212, 1295
Alw21I GWGCWC 1 cut(s) 229
Alw26I GTCTC 3 cut(s) 485, 547, 1211
AlwI GGATC 2 cut(s) 251, 645
Ama87I CYCGRG 1 cut(s) 608
AoxI GGCC 2 cut(s) 118, 420
ApeKI GCWGC 4 cut(s) 4, 386, 560, 1179
ApoI RAATTY 3 cut(s) 83, 148, 603
ArsI GACNNNNNNTTYG 2 cut(s) 797, 829
Asp700I GAANNNNTTC 1 cut(s) 33
Asp718I GGTACC 1 cut(s) 896
AspA2I CCTAGG 1 cut(s) 581
AspLEI GCGC 1 cut(s) 737
AsuC2I CCSGG 4 cut(s) 261, 635, 1032, 1059
AsuHPI GGTGA 4 cut(s) 370, 1020, 1248, 1272
AsuII TTCGAA 1 cut(s) 1231
AvaI CYCGRG 1 cut(s) 608
AvrII CCTAGG 1 cut(s) 581
BanI GGYRCC 1 cut(s) 896
BanII GRGCYC 1 cut(s) 229
BarI GAAGNNNNNNTAC 2 cut(s) 324, 356
BauI CACGAG 2 cut(s) 230, 865
Bbv12I GWGCWC 1 cut(s) 229
BbvI GCAGC 4 cut(s) 16, 398, 547, 1166
BccI CCATC 5 cut(s) 107, 312, 931, 976, 1014
BcgI CGANNNNNNTGC 2 cut(s) 221, 255
BciT130I CCWGG 2 cut(s) 297, 684
BcnI CCSGG 4 cut(s) 261, 635, 1032, 1059
BcoDI GTCTC 3 cut(s) 485, 547, 1211
BfaI CTAG 4 cut(s) 470, 482, 506, 582
BfmI CTRYAG 1 cut(s) 655
BglI GCCNNNNNGGC 1 cut(s) 419
BglII AGATCT 1 cut(s) 552
BisI GCNGC 5 cut(s) 5, 211, 387, 561, 1180
BlnI CCTAGG 1 cut(s) 581
BlsI GCNGC 5 cut(s) 6, 212, 388, 562, 1181
Bme1390I CCNGG 6 cut(s) 261, 297, 635, 684, 1032, 1059
BmeT110I CYCGRG 1 cut(s) 608
BmiI GGNNCC 3 cut(s) 279, 680, 898
BmrFI CCNGG 6 cut(s) 261, 297, 635, 684, 1032, 1059
BmsI GCATC 6 cut(s) 388, 709, 786, 790, 800, 1141
Bpu14I TTCGAA 1 cut(s) 1231
BpuEI CTTGAG 1 cut(s) 905
BpuMI CCSGG 4 cut(s) 261, 635, 1032, 1059
Bsa29I ATCGAT 1 cut(s) 794
BsaI GGTCTC 1 cut(s) 485
BsaJI CCNNGG 4 cut(s) 390, 581, 666, 682
BsaWI WCCGGW 1 cut(s) 221
Bsc4I CCNNNNNNNGG 4 cut(s) 640, 1057, 1058, 1102
Bse1I ACTGG 1 cut(s) 344
Bse3DI GCAATG 3 cut(s) 594, 922, 1045
BseBI CCWGG 2 cut(s) 297, 684
BseCI ATCGAT 1 cut(s) 794
BseDI CCNNGG 4 cut(s) 390, 581, 666, 682
BseGI GGATG 3 cut(s) 942, 1156, 1246
BseLI CCNNNNNNNGG 4 cut(s) 640, 1057, 1058, 1102
BseMI GCAATG 3 cut(s) 594, 922, 1045
BseMII CTCAG 4 cut(s) 590, 791, 1193, 1222
BseNI ACTGG 1 cut(s) 344
BseXI GCAGC 4 cut(s) 16, 398, 547, 1166
BsgI GTGCAG 1 cut(s) 51
Bsh1236I CGCG 1 cut(s) 737
BshFI GGCC 2 cut(s) 120, 422
BshNI GGYRCC 1 cut(s) 896
BshVI ATCGAT 1 cut(s) 794
BsiHKAI GWGCWC 1 cut(s) 229
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 5 cut(s) 222, 261, 634, 1032, 1058
BslFI GGGAC 1 cut(s) 894
BslI CCNNNNNNNGG 4 cut(s) 640, 1057, 1058, 1102
BsmAI GTCTC 3 cut(s) 485, 547, 1211
BsmFI GGGAC 1 cut(s) 894
BsmI GAATGC 2 cut(s) 632, 1261
BsnI GGCC 2 cut(s) 120, 422
Bso31I GGTCTC 1 cut(s) 485
BsoBI CYCGRG 1 cut(s) 608
Bsp119I TTCGAA 1 cut(s) 1231
Bsp1286I GDGCHC 1 cut(s) 229
Bsp143I GATC 4 cut(s) 256, 375, 552, 637
BspACI CCGC 4 cut(s) 196, 210, 213, 1259
BspANI GGCC 2 cut(s) 120, 422
BspCNI CTCAG 4 cut(s) 589, 790, 1194, 1221
BspDI ATCGAT 1 cut(s) 794
BspFNI CGCG 1 cut(s) 737
BspLI GGNNCC 3 cut(s) 279, 680, 898
BspPI GGATC 2 cut(s) 251, 645
BspQI GCTCTTC 2 cut(s) 905, 1169
BspT104I TTCGAA 1 cut(s) 1231
BspT107I GGYRCC 1 cut(s) 896
BspTNI GGTCTC 1 cut(s) 485
BsrBI CCGCTC 1 cut(s) 210
BsrDI GCAATG 3 cut(s) 594, 922, 1045
BsrI ACTGG 1 cut(s) 344
BssECI CCNNGG 4 cut(s) 390, 581, 666, 682
BssMI GATC 4 cut(s) 256, 375, 552, 637
BssSI CACGAG 2 cut(s) 230, 865
BssT1I CCWWGG 3 cut(s) 390, 581, 666
Bst2BI CACGAG 2 cut(s) 230, 865
Bst2UI CCWGG 2 cut(s) 297, 684
Bst4CI ACNGT 5 cut(s) 478, 568, 659, 877, 1278
Bst6I CTCTTC 2 cut(s) 905, 1169
BstBI TTCGAA 1 cut(s) 1231
BstC8I GCNNGC 2 cut(s) 122, 1184
BstDEI CTNAG 5 cut(s) 576, 777, 1202, 1208, 1299
BstF5I GGATG 3 cut(s) 942, 1156, 1246
BstFNI CGCG 1 cut(s) 737
BstHHI GCGC 1 cut(s) 737
BstKTI GATC 4 cut(s) 259, 378, 555, 640
BstMAI GTCTC 3 cut(s) 485, 547, 1211
BstMBI GATC 4 cut(s) 256, 375, 552, 637
BstMWI GCNNNNNNNGC 6 cut(s) 74, 224, 419, 921, 983, 1160
BstNI CCWGG 2 cut(s) 297, 684
BstNSI RCATGY 1 cut(s) 1255
BstSCI CCNGG 6 cut(s) 259, 295, 633, 682, 1030, 1057
BstSFI CTRYAG 1 cut(s) 655
BstUI CGCG 1 cut(s) 737
BstV1I GCAGC 4 cut(s) 16, 398, 547, 1166
BstX2I RGATCY 2 cut(s) 552, 637
BstXI CCANNNNNNTGG 1 cut(s) 673
BstYI RGATCY 2 cut(s) 552, 637
Bsu15I ATCGAT 1 cut(s) 794
BsuRI GGCC 2 cut(s) 120, 422
BsuTUI ATCGAT 1 cut(s) 794
BtsCI GGATG 3 cut(s) 942, 1156, 1246
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 3 cut(s) 63, 564, 873
Cac8I GCNNGC 2 cut(s) 122, 1184
CfoI GCGC 1 cut(s) 737
ClaI ATCGAT 1 cut(s) 794
Csp6I GTAC 3 cut(s) 332, 706, 897
CviAII CATG 5 cut(s) 116, 154, 673, 1087, 1252
CviQI GTAC 3 cut(s) 332, 706, 897
DdeI CTNAG 5 cut(s) 576, 777, 1202, 1208, 1299
DpnI GATC 4 cut(s) 258, 377, 554, 639
DpnII GATC 4 cut(s) 256, 375, 552, 637
DraI TTTAAA 1 cut(s) 957
DraIII CACNNNGTG 1 cut(s) 1034
Eam1104I CTCTTC 2 cut(s) 905, 1169
EarI CTCTTC 2 cut(s) 905, 1169
EciI GGCGGA 1 cut(s) 228
Ecl136II GAGCTC 1 cut(s) 227
Eco130I CCWWGG 3 cut(s) 390, 581, 666
Eco24I GRGCYC 1 cut(s) 229
Eco31I GGTCTC 1 cut(s) 485
Eco53kI GAGCTC 1 cut(s) 227
Eco88I CYCGRG 1 cut(s) 608
EcoICRI GAGCTC 1 cut(s) 227
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 2 cut(s) 295, 682
EcoT14I CCWWGG 3 cut(s) 390, 581, 666
EcoT38I GRGCYC 1 cut(s) 229
ErhI CCWWGG 3 cut(s) 390, 581, 666
FaeI CATG 5 cut(s) 119, 157, 676, 1090, 1255
FaqI GGGAC 1 cut(s) 894
FatI CATG 5 cut(s) 115, 153, 672, 1086, 1251
FblI GTMKAC 1 cut(s) 654
Fnu4HI GCNGC 5 cut(s) 5, 211, 387, 561, 1180
FokI GGATG 3 cut(s) 949, 1163, 1253
FriOI GRGCYC 1 cut(s) 229
Fsp4HI GCNGC 5 cut(s) 5, 211, 387, 561, 1180
FspBI CTAG 4 cut(s) 470, 482, 506, 582
GlaI GCGC 1 cut(s) 736
GluI GCNGC 5 cut(s) 5, 211, 387, 561, 1180
HaeIII GGCC 2 cut(s) 120, 422
HapII CCGG 5 cut(s) 222, 261, 634, 1032, 1058
HhaI GCGC 1 cut(s) 737
Hin1II CATG 5 cut(s) 119, 157, 676, 1090, 1255
Hin6I GCGC 1 cut(s) 735
HinP1I GCGC 1 cut(s) 735
HinfI GANTC 7 cut(s) 22, 177, 300, 825, 870, 1122, 1204
HpaII CCGG 5 cut(s) 222, 261, 634, 1032, 1058
HphI GGTGA 4 cut(s) 370, 1020, 1248, 1272
Hpy166II GTNNAC 5 cut(s) 573, 646, 655, 706, 820
Hpy188I TCNGA 6 cut(s) 39, 134, 431, 547, 805, 1127
Hpy188III TCNNGA 6 cut(s) 26, 107, 230, 373, 608, 1142
Hpy8I GTNNAC 5 cut(s) 573, 646, 655, 706, 820
HpyAV CCTTC 1 cut(s) 1231
HpyCH4III ACNGT 5 cut(s) 478, 568, 659, 877, 1278
HpyCH4V TGCA 7 cut(s) 4, 63, 68, 146, 630, 722, 946
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 224, 419, 921, 983, 1160
HpyF3I CTNAG 5 cut(s) 576, 777, 1202, 1208, 1299
Hsp92II CATG 5 cut(s) 119, 157, 676, 1090, 1255
HspAI GCGC 1 cut(s) 735
KpnI GGTACC 1 cut(s) 900
Kzo9I GATC 4 cut(s) 256, 375, 552, 637
LguI GCTCTTC 2 cut(s) 905, 1169
LmnI GCTCC 5 cut(s) 74, 215, 224, 365, 961
Lsp1109I GCAGC 4 cut(s) 16, 398, 547, 1166
LweI GCATC 6 cut(s) 388, 709, 786, 790, 800, 1141
MaeI CTAG 4 cut(s) 470, 482, 506, 582
MaeIII GTNAC 5 cut(s) 178, 508, 1026, 1254, 1278
MalI GATC 4 cut(s) 258, 377, 554, 639
MbiI CCGCTC 1 cut(s) 210
MboI GATC 4 cut(s) 256, 375, 552, 637
MboII GAAGA 8 cut(s) 332, 407, 538, 626, 629, 922, 1183, 1186
MflI RGATCY 2 cut(s) 552, 637
MhlI GDGCHC 1 cut(s) 229
MluCI AATT 7 cut(s) 83, 148, 367, 603, 730, 1164, 1225
MlyI GAGTC 2 cut(s) 186, 1213
MmeI TCCRAC 1 cut(s) 387
MnlI CCTC 9 cut(s) 64, 161, 259, 469, 604, 840, 880, 1237, 1293
MroXI GAANNNNTTC 1 cut(s) 33
MseI TTAA 5 cut(s) 435, 498, 956, 1014, 1167
MslI CAYNNNNRTG 1 cut(s) 203
MspI CCGG 5 cut(s) 222, 261, 634, 1032, 1058
MspR9I CCNGG 6 cut(s) 261, 297, 635, 684, 1032, 1059
Mva1269I GAATGC 2 cut(s) 632, 1261
MvaI CCWGG 2 cut(s) 297, 684
MvnI CGCG 1 cut(s) 737
MwoI GCNNNNNNNGC 6 cut(s) 74, 224, 419, 921, 983, 1160
NciI CCSGG 4 cut(s) 261, 635, 1032, 1059
NdeII GATC 4 cut(s) 256, 375, 552, 637
NlaIII CATG 5 cut(s) 119, 157, 676, 1090, 1255
NlaIV GGNNCC 3 cut(s) 279, 680, 898
NmuCI GTSAC 4 cut(s) 178, 1026, 1254, 1278
NspI RCATGY 1 cut(s) 1255
NspV TTCGAA 1 cut(s) 1231
PaeR7I CTCGAG 1 cut(s) 608
PciSI GCTCTTC 2 cut(s) 905, 1169
PctI GAATGC 2 cut(s) 632, 1261
PdmI GAANNNNTTC 1 cut(s) 33
PfeI GAWTC 5 cut(s) 22, 300, 825, 870, 1122
PflMI CCANNNNNTGG 1 cut(s) 1102
PfoI TCCNGGA 2 cut(s) 259, 295
PkrI GCNGC 5 cut(s) 6, 212, 388, 562, 1181
PleI GAGTC 2 cut(s) 185, 1212
PpsI GAGTC 2 cut(s) 185, 1212
Psp124BI GAGCTC 1 cut(s) 229
Psp6I CCWGG 2 cut(s) 295, 682
PspGI CCWGG 2 cut(s) 295, 682
PspN4I GGNNCC 3 cut(s) 279, 680, 898
PsuI RGATCY 2 cut(s) 552, 637
RsaI GTAC 3 cut(s) 333, 707, 898
RsaNI GTAC 3 cut(s) 332, 706, 897
RseI CAYNNNNRTG 1 cut(s) 203
SacI GAGCTC 1 cut(s) 229
SapI GCTCTTC 2 cut(s) 905, 1169
SaqAI TTAA 5 cut(s) 435, 498, 956, 1014, 1167
SatI GCNGC 5 cut(s) 5, 211, 387, 561, 1180
Sau3AI GATC 4 cut(s) 256, 375, 552, 637
SchI GAGTC 2 cut(s) 186, 1213
ScrFI CCNGG 6 cut(s) 261, 297, 635, 684, 1032, 1059
SduI GDGCHC 1 cut(s) 229
SfaNI GCATC 6 cut(s) 388, 709, 786, 790, 800, 1141
SfcI CTRYAG 1 cut(s) 655
Sfr274I CTCGAG 1 cut(s) 608
SfuI TTCGAA 1 cut(s) 1231
SlaI CTCGAG 1 cut(s) 608
SmiMI CAYNNNNRTG 1 cut(s) 203
SmlI CTYRAG 2 cut(s) 608, 884
SmoI CTYRAG 2 cut(s) 608, 884
Sse9I AATT 7 cut(s) 83, 148, 367, 603, 730, 1164, 1225
SsiI CCGC 4 cut(s) 196, 210, 213, 1259
SspI AATATT 1 cut(s) 1236
SspMI CTAG 4 cut(s) 470, 482, 506, 582
SstI GAGCTC 1 cut(s) 229
StyD4I CCNGG 6 cut(s) 259, 295, 633, 682, 1030, 1057
StyI CCWWGG 3 cut(s) 390, 581, 666
TaaI ACNGT 5 cut(s) 478, 568, 659, 877, 1278
TaqI TCGA 8 cut(s) 175, 186, 303, 609, 749, 794, 1231, 1291
TasI AATT 7 cut(s) 83, 148, 367, 603, 730, 1164, 1225
TatI WGTACW 1 cut(s) 705
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 5 cut(s) 22, 300, 825, 870, 1122
Tru1I TTAA 5 cut(s) 435, 498, 956, 1014, 1167
Tru9I TTAA 5 cut(s) 435, 498, 956, 1014, 1167
TscAI CASTG 3 cut(s) 70, 571, 880
TseFI GTSAC 4 cut(s) 178, 1026, 1254, 1278
TseI GCWGC 4 cut(s) 4, 386, 560, 1179
Tsp45I GTSAC 4 cut(s) 178, 1026, 1254, 1278
TspDTI ATGAA 5 cut(s) 142, 505, 577, 817, 1034
TspRI CASTG 3 cut(s) 70, 571, 880
Van91I CCANNNNNTGG 1 cut(s) 1102
XapI RAATTY 3 cut(s) 83, 148, 603
XceI RCATGY 1 cut(s) 1255
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XhoI CTCGAG 1 cut(s) 608
XmaJI CCTAGG 1 cut(s) 581
XmiI GTMKAC 1 cut(s) 654
XmnI GAANNNNTTC 1 cut(s) 33
XspI CTAG 4 cut(s) 470, 482, 506, 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.