Rh7AG159200

1-aminocyclopropane-1-carboxylate

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
13322888 .. 13326072
3185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG159200.1

Sequence Viewer

Length: 1149 bp
ATGGGAAAAGTGAGAGGAAATCGAGTCACATTCGACCCTGACCGCATTGTTATGAGCGGCGGAGCAACCGGAGCTCACGAGATGATTGCCTTTTGCTTGGCTGATCCCGGAGAGGCATTTCTGGTTCCCGTTCCTTATTATCCTGGATTCGATAGAGATTTGAGATGGCGAACAGGGGTACAACTTCTTCCAGTTGCTTGTGAAAGCTCCAACAATTTCAAGATCACCAGGGCAGCCTTGGAAGATGCCTATGAGAAAGCCCAAAAGGCCAACATCAGAGTTAAAGGCTTACTCATTACCAACCCCTCAAACCCACTAGGCACAGTCCTAGACAGAGAGACCCTTAAAAGCCTAGTAACTTTCATCAATGAGAAGAATATCCACCTAGTCTGTGATGAGATCTATGCTGCCACTGTGTTCACTCAGCCTAGGTTCATCAGCATTGCTGAAATTCTCGAGGAAGAAGAAGTAGAATGCAACCGGGACCTGGTTCACATTGTCTACAGTCTTTCCAAGGACATGGGGTTCCCTGGCTTTAGGGTTGGGATAGTGTACTCATACAATGATGGAGTAGTGAATTGCGCGAGGAAGATGTCGAGTTTCGGGTTGGTTTCTACACAAACTCAGCATCTAATCGCATCGATGCTATCAGACAATGAGTTTGTGGACAGATTCATTGTAGAAAGTGCCAAGAGGTTGAAAGCAAGGCACAAGAGATTCACTGTGGGACTTGAGGAACAAGGTACCACTTGTTTGAAGAGCAATGGTGGCTTGTTTGTGTGGATGGACTTGCACAAGCATTTAAAGGAGCAAACTTTTGAAGCAGAGATGGCATTGTGGAGAACCATAATCCATCAAGTTAAGCTCAATGTGTCACCCGGTGTTTCTTTTCATTGCCCCGAACCGGGTTGGTTCAGGGTTTGTTTTGCCAACATGGACGACCAGACTATGGAAGTTGCTTTGGAACGAATCAGAAACTTTGTGCTTCAAGACAAGGATGCTGTGGTAGCAATTAAGAAGAAGAGCTGCTGGCAAAGTAATAAAAAGCTGAGTCTCAGCTTCAAATCCTTCAATTTTCGATTATTGGATGAGGTCAGCATGTCACCGCATTCCCCTATTCCACAGTCACCTCTTGTTCGAGCCACTTAA

Protein Analysis

382

Amino Acids

43.14

Weight (kDa)

8.03

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 5 - 324 7.2e-95 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012840)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 743
AccB1I GGYRCC 1 cut(s) 743
AccB7I CCANNNNNTGG 1 cut(s) 949
AccBSI CCGCTC 1 cut(s) 57
AccI GTMKAC 1 cut(s) 501
AccII CGCG 1 cut(s) 584
AciI CCGC 4 cut(s) 43, 57, 60, 1106
AclWI GGATC 1 cut(s) 98
AcsI RAATTY 1 cut(s) 450
AdeI CACNNNGTG 1 cut(s) 881
AfaI GTAC 3 cut(s) 180, 554, 745
AfiI CCNNNNNNNGG 4 cut(s) 487, 904, 905, 949
AgsI TTSAA 7 cut(s) 220, 700, 757, 821, 989, 1063, 1072
AjnI CCWGG 4 cut(s) 142, 227, 486, 529
AloI GAACNNNNNNTCC 2 cut(s) 509, 541
AluBI AGCT 6 cut(s) 74, 207, 865, 1026, 1048, 1059
AluI AGCT 6 cut(s) 74, 207, 865, 1026, 1048, 1059
Alw21I GWGCWC 1 cut(s) 76
Alw26I GTCTC 2 cut(s) 332, 1058
AlwI GGATC 1 cut(s) 98
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 1 cut(s) 267
ApeKI GCWGC 3 cut(s) 233, 407, 1026
ApoI RAATTY 1 cut(s) 450
ArsI GACNNNNNNTTYG 2 cut(s) 644, 676
Asp718I GGTACC 1 cut(s) 743
AspA2I CCTAGG 1 cut(s) 428
AspLEI GCGC 1 cut(s) 584
AspS9I GGNCC 1 cut(s) 484
AsuC2I CCSGG 4 cut(s) 108, 482, 879, 906
AsuHPI GGTGA 4 cut(s) 217, 867, 1095, 1119
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 1 cut(s) 484
AvrII CCTAGG 1 cut(s) 428
BanI GGYRCC 1 cut(s) 743
BanII GRGCYC 1 cut(s) 76
BarI GAAGNNNNNNTAC 2 cut(s) 171, 203
BauI CACGAG 1 cut(s) 77
Bbv12I GWGCWC 1 cut(s) 76
BbvI GCAGC 3 cut(s) 245, 394, 1013
BccI CCATC 5 cut(s) 159, 560, 778, 823, 861
BcgI CGANNNNNNTGC 2 cut(s) 68, 102
BciT130I CCWGG 4 cut(s) 144, 229, 488, 531
BcnI CCSGG 4 cut(s) 108, 482, 879, 906
BcoDI GTCTC 2 cut(s) 332, 1058
BfaI CTAG 5 cut(s) 317, 329, 353, 386, 429
BfmI CTRYAG 1 cut(s) 502
BglI GCCNNNNNGGC 1 cut(s) 266
BglII AGATCT 1 cut(s) 399
BisI GCNGC 4 cut(s) 58, 234, 408, 1027
BlnI CCTAGG 1 cut(s) 428
BlsI GCNGC 4 cut(s) 59, 235, 409, 1028
Bme1390I CCNGG 8 cut(s) 108, 144, 229, 482, 488, 531, 879, 906
Bme18I GGWCC 1 cut(s) 484
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 1 cut(s) 484
BmiI GGNNCC 4 cut(s) 126, 485, 527, 745
BmrFI CCNGG 8 cut(s) 108, 144, 229, 482, 488, 531, 879, 906
BmsI GCATC 5 cut(s) 235, 633, 637, 647, 988
BpuEI CTTGAG 1 cut(s) 752
BpuMI CCSGG 4 cut(s) 108, 482, 879, 906
Bsa29I ATCGAT 1 cut(s) 641
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 5 cut(s) 228, 237, 428, 513, 529
BsaWI WCCGGW 1 cut(s) 68
Bsc4I CCNNNNNNNGG 4 cut(s) 487, 904, 905, 949
Bse1I ACTGG 1 cut(s) 191
Bse3DI GCAATG 3 cut(s) 441, 769, 892
BseBI CCWGG 4 cut(s) 144, 229, 488, 531
BseCI ATCGAT 1 cut(s) 641
BseDI CCNNGG 5 cut(s) 228, 237, 428, 513, 529
BseGI GGATG 3 cut(s) 789, 1003, 1093
BseLI CCNNNNNNNGG 4 cut(s) 487, 904, 905, 949
BseMI GCAATG 3 cut(s) 441, 769, 892
BseMII CTCAG 4 cut(s) 437, 638, 1040, 1069
BseNI ACTGG 1 cut(s) 191
BseXI GCAGC 3 cut(s) 245, 394, 1013
Bsh1236I CGCG 1 cut(s) 584
BshFI GGCC 1 cut(s) 269
BshNI GGYRCC 1 cut(s) 743
BshVI ATCGAT 1 cut(s) 641
BsiHKAI GWGCWC 1 cut(s) 76
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 5 cut(s) 69, 108, 481, 879, 905
BslFI GGGAC 2 cut(s) 497, 741
BslI CCNNNNNNNGG 4 cut(s) 487, 904, 905, 949
BsmAI GTCTC 2 cut(s) 332, 1058
BsmFI GGGAC 2 cut(s) 497, 741
BsmI GAATGC 2 cut(s) 479, 1108
BsnI GGCC 1 cut(s) 269
Bso31I GGTCTC 1 cut(s) 332
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 76
Bsp143I GATC 3 cut(s) 103, 222, 399
BspACI CCGC 4 cut(s) 43, 57, 60, 1106
BspANI GGCC 1 cut(s) 269
BspCNI CTCAG 4 cut(s) 436, 637, 1041, 1068
BspDI ATCGAT 1 cut(s) 641
BspFNI CGCG 1 cut(s) 584
BspLI GGNNCC 4 cut(s) 126, 485, 527, 745
BspPI GGATC 1 cut(s) 98
BspQI GCTCTTC 2 cut(s) 752, 1016
BspT107I GGYRCC 1 cut(s) 743
BspTNI GGTCTC 1 cut(s) 332
BsrBI CCGCTC 1 cut(s) 57
BsrDI GCAATG 3 cut(s) 441, 769, 892
BsrI ACTGG 1 cut(s) 191
BssECI CCNNGG 5 cut(s) 228, 237, 428, 513, 529
BssMI GATC 3 cut(s) 103, 222, 399
BssSI CACGAG 1 cut(s) 77
BssT1I CCWWGG 3 cut(s) 237, 428, 513
Bst2BI CACGAG 1 cut(s) 77
Bst2UI CCWGG 4 cut(s) 144, 229, 488, 531
Bst4CI ACNGT 5 cut(s) 325, 415, 506, 724, 1125
Bst6I CTCTTC 2 cut(s) 752, 1016
BstC8I GCNNGC 1 cut(s) 1031
BstDEI CTNAG 4 cut(s) 423, 624, 1049, 1055
BstF5I GGATG 3 cut(s) 789, 1003, 1093
BstFNI CGCG 1 cut(s) 584
BstHHI GCGC 1 cut(s) 584
BstKTI GATC 3 cut(s) 106, 225, 402
BstMAI GTCTC 2 cut(s) 332, 1058
BstMBI GATC 3 cut(s) 103, 222, 399
BstMWI GCNNNNNNNGC 5 cut(s) 71, 266, 768, 830, 1007
BstNI CCWGG 4 cut(s) 144, 229, 488, 531
BstNSI RCATGY 1 cut(s) 1102
BstSCI CCNGG 8 cut(s) 106, 142, 227, 480, 486, 529, 877, 904
BstSFI CTRYAG 1 cut(s) 502
BstUI CGCG 1 cut(s) 584
BstV1I GCAGC 3 cut(s) 245, 394, 1013
BstX2I RGATCY 1 cut(s) 399
BstXI CCANNNNNNTGG 1 cut(s) 520
BstYI RGATCY 1 cut(s) 399
Bsu15I ATCGAT 1 cut(s) 641
BsuRI GGCC 1 cut(s) 269
BsuTUI ATCGAT 1 cut(s) 641
BtsCI GGATG 3 cut(s) 789, 1003, 1093
BtsIMutI CAGTG 2 cut(s) 411, 720
Cac8I GCNNGC 1 cut(s) 1031
CfoI GCGC 1 cut(s) 584
Cfr13I GGNCC 1 cut(s) 484
ClaI ATCGAT 1 cut(s) 641
CsiI ACCWGGT 1 cut(s) 486
Csp6I GTAC 3 cut(s) 179, 553, 744
CviAII CATG 3 cut(s) 520, 934, 1099
CviQI GTAC 3 cut(s) 179, 553, 744
DdeI CTNAG 4 cut(s) 423, 624, 1049, 1055
DpnI GATC 3 cut(s) 105, 224, 401
DpnII GATC 3 cut(s) 103, 222, 399
DraI TTTAAA 1 cut(s) 804
DraIII CACNNNGTG 1 cut(s) 881
Eam1104I CTCTTC 2 cut(s) 752, 1016
EarI CTCTTC 2 cut(s) 752, 1016
EciI GGCGGA 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 74
Eco130I CCWWGG 3 cut(s) 237, 428, 513
Eco24I GRGCYC 1 cut(s) 76
Eco31I GGTCTC 1 cut(s) 332
Eco47I GGWCC 1 cut(s) 484
Eco53kI GAGCTC 1 cut(s) 74
Eco88I CYCGRG 1 cut(s) 455
EcoICRI GAGCTC 1 cut(s) 74
EcoO109I RGGNCCY 1 cut(s) 484
EcoRII CCWGG 4 cut(s) 142, 227, 486, 529
EcoT14I CCWWGG 3 cut(s) 237, 428, 513
EcoT38I GRGCYC 1 cut(s) 76
ErhI CCWWGG 3 cut(s) 237, 428, 513
FaeI CATG 3 cut(s) 523, 937, 1102
FaiI YATR 9 cut(s) 53, 252, 405, 521, 559, 848, 935, 950, 1100
FaqI GGGAC 2 cut(s) 497, 741
FatI CATG 3 cut(s) 519, 933, 1098
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 4 cut(s) 58, 234, 408, 1027
FokI GGATG 3 cut(s) 796, 1010, 1100
FriOI GRGCYC 1 cut(s) 76
Fsp4HI GCNGC 4 cut(s) 58, 234, 408, 1027
FspBI CTAG 5 cut(s) 317, 329, 353, 386, 429
GlaI GCGC 1 cut(s) 583
GluI GCNGC 4 cut(s) 58, 234, 408, 1027
HaeIII GGCC 1 cut(s) 269
HapII CCGG 5 cut(s) 69, 108, 481, 879, 905
HhaI GCGC 1 cut(s) 584
Hin1II CATG 3 cut(s) 523, 937, 1102
Hin6I GCGC 1 cut(s) 582
HinP1I GCGC 1 cut(s) 582
HinfI GANTC 6 cut(s) 24, 147, 672, 717, 969, 1051
HpaII CCGG 5 cut(s) 69, 108, 481, 879, 905
HphI GGTGA 4 cut(s) 217, 867, 1095, 1119
Hpy166II GTNNAC 5 cut(s) 420, 493, 502, 553, 667
Hpy188I TCNGA 3 cut(s) 278, 652, 974
Hpy188III TCNNGA 4 cut(s) 77, 220, 455, 989
Hpy8I GTNNAC 5 cut(s) 420, 493, 502, 553, 667
HpyAV CCTTC 1 cut(s) 1078
HpyCH4III ACNGT 5 cut(s) 325, 415, 506, 724, 1125
HpyCH4V TGCA 2 cut(s) 477, 793
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 266, 768, 830, 1007
HpyF3I CTNAG 4 cut(s) 423, 624, 1049, 1055
Hsp92II CATG 3 cut(s) 523, 937, 1102
HspAI GCGC 1 cut(s) 582
KpnI GGTACC 1 cut(s) 747
Kzo9I GATC 3 cut(s) 103, 222, 399
LguI GCTCTTC 2 cut(s) 752, 1016
LmnI GCTCC 4 cut(s) 62, 71, 212, 808
Lsp1109I GCAGC 3 cut(s) 245, 394, 1013
LweI GCATC 5 cut(s) 235, 633, 637, 647, 988
MabI ACCWGGT 1 cut(s) 486
MaeI CTAG 5 cut(s) 317, 329, 353, 386, 429
MaeIII GTNAC 5 cut(s) 25, 355, 873, 1101, 1125
MalI GATC 3 cut(s) 105, 224, 401
MbiI CCGCTC 1 cut(s) 57
MboI GATC 3 cut(s) 103, 222, 399
MboII GAAGA 9 cut(s) 179, 254, 385, 473, 476, 601, 769, 1030, 1033
MflI RGATCY 1 cut(s) 399
MhlI GDGCHC 1 cut(s) 76
MluCI AATT 5 cut(s) 214, 450, 577, 1011, 1072
MlyI GAGTC 2 cut(s) 33, 1060
MmeI TCCRAC 1 cut(s) 234
MnlI CCTC 9 cut(s) 8, 106, 316, 451, 579, 687, 727, 1084, 1140
MseI TTAA 6 cut(s) 282, 345, 803, 861, 1014, 1147
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 5 cut(s) 69, 108, 481, 879, 905
MspR9I CCNGG 8 cut(s) 108, 144, 229, 482, 488, 531, 879, 906
Mva1269I GAATGC 2 cut(s) 479, 1108
MvaI CCWGG 4 cut(s) 144, 229, 488, 531
MvnI CGCG 1 cut(s) 584
MwoI GCNNNNNNNGC 5 cut(s) 71, 266, 768, 830, 1007
NciI CCSGG 4 cut(s) 108, 482, 879, 906
NdeII GATC 3 cut(s) 103, 222, 399
NlaIII CATG 3 cut(s) 523, 937, 1102
NlaIV GGNNCC 4 cut(s) 126, 485, 527, 745
NmuCI GTSAC 4 cut(s) 25, 873, 1101, 1125
NspI RCATGY 1 cut(s) 1102
PaeR7I CTCGAG 1 cut(s) 455
PciSI GCTCTTC 2 cut(s) 752, 1016
PctI GAATGC 2 cut(s) 479, 1108
PfeI GAWTC 4 cut(s) 147, 672, 717, 969
PflMI CCANNNNNTGG 1 cut(s) 949
PfoI TCCNGGA 2 cut(s) 106, 142
PkrI GCNGC 4 cut(s) 59, 235, 409, 1028
PleI GAGTC 2 cut(s) 32, 1059
PpsI GAGTC 2 cut(s) 32, 1059
PpuMI RGGWCCY 1 cut(s) 484
Psp124BI GAGCTC 1 cut(s) 76
Psp5II RGGWCCY 1 cut(s) 484
Psp6I CCWGG 4 cut(s) 142, 227, 486, 529
PspGI CCWGG 4 cut(s) 142, 227, 486, 529
PspN4I GGNNCC 4 cut(s) 126, 485, 527, 745
PspPI GGNCC 1 cut(s) 484
PspPPI RGGWCCY 1 cut(s) 484
PsuI RGATCY 1 cut(s) 399
RsaI GTAC 3 cut(s) 180, 554, 745
RsaNI GTAC 3 cut(s) 179, 553, 744
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 76
SapI GCTCTTC 2 cut(s) 752, 1016
SaqAI TTAA 6 cut(s) 282, 345, 803, 861, 1014, 1147
SatI GCNGC 4 cut(s) 58, 234, 408, 1027
Sau3AI GATC 3 cut(s) 103, 222, 399
Sau96I GGNCC 1 cut(s) 484
SchI GAGTC 2 cut(s) 33, 1060
ScrFI CCNGG 8 cut(s) 108, 144, 229, 482, 488, 531, 879, 906
SduI GDGCHC 1 cut(s) 76
SexAI ACCWGGT 1 cut(s) 486
SfaNI GCATC 5 cut(s) 235, 633, 637, 647, 988
SfcI CTRYAG 1 cut(s) 502
Sfr274I CTCGAG 1 cut(s) 455
SinI GGWCC 1 cut(s) 484
SlaI CTCGAG 1 cut(s) 455
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 455, 731
SmoI CTYRAG 2 cut(s) 455, 731
Sse9I AATT 5 cut(s) 214, 450, 577, 1011, 1072
SsiI CCGC 4 cut(s) 43, 57, 60, 1106
SspMI CTAG 5 cut(s) 317, 329, 353, 386, 429
SstI GAGCTC 1 cut(s) 76
StyD4I CCNGG 8 cut(s) 106, 142, 227, 480, 486, 529, 877, 904
StyI CCWWGG 3 cut(s) 237, 428, 513
TaaI ACNGT 5 cut(s) 325, 415, 506, 724, 1125
TaqI TCGA 8 cut(s) 22, 33, 150, 456, 596, 641, 1078, 1138
TasI AATT 5 cut(s) 214, 450, 577, 1011, 1072
TatI WGTACW 1 cut(s) 552
TauI GCSGC 1 cut(s) 60
TfiI GAWTC 4 cut(s) 147, 672, 717, 969
Tru1I TTAA 6 cut(s) 282, 345, 803, 861, 1014, 1147
Tru9I TTAA 6 cut(s) 282, 345, 803, 861, 1014, 1147
TscAI CASTG 2 cut(s) 418, 727
TseFI GTSAC 4 cut(s) 25, 873, 1101, 1125
TseI GCWGC 3 cut(s) 233, 407, 1026
Tsp45I GTSAC 4 cut(s) 25, 873, 1101, 1125
TspDTI ATGAA 4 cut(s) 352, 424, 664, 881
TspRI CASTG 2 cut(s) 418, 727
Van91I CCANNNNNTGG 1 cut(s) 949
VpaK11BI GGWCC 1 cut(s) 484
XapI RAATTY 1 cut(s) 450
XceI RCATGY 1 cut(s) 1102
XcmI CCANNNNNNNNNTGG 1 cut(s) 235
XhoI CTCGAG 1 cut(s) 455
XmaJI CCTAGG 1 cut(s) 428
XmiI GTMKAC 1 cut(s) 501
XspI CTAG 5 cut(s) 317, 329, 353, 386, 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.