Prupe.5G106200_v2.0.a1

1-aminocyclopropane-1-carboxylate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11240965 .. 11244068
3104 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G106200.1

Sequence Viewer

Length: 1452 bp
ATGGGGTTCACTGTGAGCAACCAACAGCAACTCTTGTCCAAGATGGCAACTGGAAATGGGCATGGTGAAAATTCTCCATACTTTGATGGCTGGAAGGCTTATGATAGTAATCCCTTTCATCCCACCAAGAACCCTAATGGGGTTATCCAGATGGGTCTTGCAGAAAATCAACTATGCTTTGATTTGATTGAAGAGTGGGTTTTGAAGAACCCAGAAGCCTCCATTTGCACAGCAGCAGGAGTAAATGAGTTCAAAGACATAGCTATCTTTCAGGACTATCATGGACTGCCAGAATTCAGAAATGCTGTTGCAAATTTCATGGGAAAAACGAGAGGAAATCAAGTCACCTTTGACCCCGACCGGATTGTTATGAGTGGAGGCGCAACCGGAGCTCATGAGATGATAGCCTTCTGCTTGGCTGATCCTGGGGATGCATTTCTGGTGCCTGTTCCTTATTATCCAGGTTTCGATCGAGATCTTGGATGGCGAACGGGGGTGCAACTTATTCCAGTTGCTTGTGAAAGCTCCAACAGTTTCAAAGTCACCAGAGCAGCCTTGGAGGCTGCCTATGAGAAAGCTCAAAAGGATAACATCAGAGTAAAGGGCTTGCTGATCACCAATCCTTCAAACCCCTTGGGCACTGTCCTAGACAGAGAGACTCTGAGAAGCCTAGTGGCCTTCATCAATGAAAAGAAAATCCACCTGGTGTGTGATGAAATATATGCTGCCACTGTCTTCAGCCAGCCAAGCTTCATAAGCATTGCAGAAATCATAGAGGAAGATATCGAATGCGACCGCAACCTTGTTCACATTGTGTACAGCCTCTCAAAGGACATGGGGTTCCCTGGCTTCAGAGTTGGCATTGTGTATTCTTACAATGATGCGGTGGTAAATTGCGCACGAAAAATGTCAAGTTTCGGCTTAGTCTCTACGCAAACTCAGCATCTGATCGCATCCATGCTTTCAGACAATGATTTTGTGGACAGATTTATTGCACAAAGTGCTAAAAGGCTGAAAGCAAGGCACATGCGCTTGACTATGGGACTTGCTCAGGTAGGCACAAGTTGTTTGAAGAGCAATGGTGGGCTCTTTGTATGGATGGACTTGCACAAGCTCCTCAAGGAGCAGACATTTGAAGCTGAGATGGCGCTGTGGCACACGATAATCCATGAAGTTAAGCTCAATGTGTCACCAGGTTCTTCTTTCCATTGCCCTGAACCAGGCTGGTTCAGAGTTTGCTTTGCCAACATGGATGACAAGACCATGGAAATTGCTTTAACTCGAATCCGAACCTTCGTGCTACAAGATAACGAGGCTGTGGCGCCAAGGAAGAACAACAGGTTCTGGCAAAGCAACCTCAGGCTCAGCTTCCAATCACGACGAATGGAAGACATCATGATGTCGCCGTGCATAATGTCGCCTCAATCGCCTCTGGTTCGAGCCATGACTTAA

Protein Analysis

484

Amino Acids

54.11

Weight (kDa)

6.2

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012840)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 898
AccB1I GGYRCC 2 cut(s) 442, 1321
AciI CCGC 2 cut(s) 796, 884
AclWI GGATC 1 cut(s) 416
AcsI RAATTY 3 cut(s) 70, 293, 313
AcuI CTGAAG 2 cut(s) 721, 835
AcyI GRCGYC 1 cut(s) 1322
AdeI CACNNNGTG 3 cut(s) 706, 814, 1001
AfaI GTAC 1 cut(s) 818
AfiI CCNNNNNNNGG 3 cut(s) 139, 829, 1220
AgsI TTSAA 7 cut(s) 191, 205, 253, 538, 627, 1072, 1136
AjnI CCWGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
AloI GAACNNNNNNTCC 2 cut(s) 824, 856
AluBI AGCT 9 cut(s) 263, 392, 525, 578, 750, 1114, 1139, 1180, 1368
AluI AGCT 9 cut(s) 263, 392, 525, 578, 750, 1114, 1139, 1180, 1368
Alw21I GWGCWC 1 cut(s) 394
Alw26I GTCTC 2 cut(s) 650, 931
AlwI GGATC 1 cut(s) 416
AlwNI CAGNNNCTG 2 cut(s) 946, 1344
AoxI GGCC 1 cut(s) 675
ApeKI GCWGC 4 cut(s) 233, 551, 563, 725
ApoI RAATTY 3 cut(s) 70, 293, 313
ArsI GACNNNNNNTTYG 2 cut(s) 959, 991
AspLEI GCGC 5 cut(s) 383, 899, 1032, 1150, 1324
AsuHPI GGTGA 5 cut(s) 77, 337, 535, 607, 1182
AxyI CCTNAGG 1 cut(s) 1358
BaeGI GKGCMC 1 cut(s) 641
BanI GGYRCC 2 cut(s) 442, 1321
BanII GRGCYC 2 cut(s) 394, 1089
BbsI GAAGAC 2 cut(s) 727, 1395
Bbv12I GWGCWC 1 cut(s) 394
BbvI GCAGC 4 cut(s) 245, 550, 563, 712
BccI CCATC 6 cut(s) 37, 80, 145, 477, 1093, 1138
BceAI ACGGC 1 cut(s) 1390
BciT130I CCWGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
BclI TGATCA 1 cut(s) 612
BcoDI GTCTC 2 cut(s) 650, 931
BfaI CTAG 2 cut(s) 647, 671
BfoI RGCGCY 2 cut(s) 1151, 1325
BglI GCCNNNNNGGC 1 cut(s) 560
BglII AGATCT 1 cut(s) 475
BisI GCNGC 4 cut(s) 234, 552, 564, 726
BlpI GCTNAGC 1 cut(s) 1364
BlsI GCNGC 4 cut(s) 235, 553, 565, 727
Bme1390I CCNGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
BmiI GGNNCC 3 cut(s) 444, 842, 1323
BmrFI CCNGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
BmsI GCATC 4 cut(s) 421, 871, 952, 962
BpiI GAAGAC 2 cut(s) 727, 1395
Bpu10I CCTNAGC 1 cut(s) 1050
Bpu1102I GCTNAGC 1 cut(s) 1364
BpuEI CTTGAG 1 cut(s) 1103
BsaBI GATNNNNATC 2 cut(s) 108, 474
BsaHI GRCGYC 1 cut(s) 1322
BsaJI CCNNGG 6 cut(s) 425, 555, 633, 844, 1263, 1325
BsaWI WCCGGW 2 cut(s) 360, 386
Bsc4I CCNNNNNNNGG 3 cut(s) 139, 829, 1220
Bse1I ACTGG 2 cut(s) 55, 509
Bse21I CCTNAGG 1 cut(s) 1358
Bse3DI GCAATG 3 cut(s) 759, 1084, 1207
Bse8I GATNNNNATC 2 cut(s) 108, 474
BseBI CCWGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
BseDI CCNNGG 6 cut(s) 425, 555, 633, 844, 1263, 1325
BseGI GGATG 6 cut(s) 118, 436, 488, 953, 1104, 1258
BseJI GATNNNNATC 2 cut(s) 108, 474
BseLI CCNNNNNNNGG 3 cut(s) 139, 829, 1220
BseMI GCAATG 3 cut(s) 759, 1084, 1207
BseMII CTCAG 6 cut(s) 653, 953, 1064, 1131, 1372, 1378
BseNI ACTGG 2 cut(s) 55, 509
BseRI GAGGAG 1 cut(s) 1106
BseSI GKGCMC 1 cut(s) 641
BseXI GCAGC 4 cut(s) 245, 550, 563, 712
Bsh1285I CGRYCG 3 cut(s) 361, 472, 796
BshFI GGCC 1 cut(s) 677
BshNI GGYRCC 2 cut(s) 442, 1321
BsiEI CGRYCG 3 cut(s) 361, 472, 796
BsiHKAI GWGCWC 1 cut(s) 394
BsiSI CCGG 2 cut(s) 361, 387
BslFI GGGAC 1 cut(s) 1056
BslI CCNNNNNNNGG 3 cut(s) 139, 829, 1220
BsmAI GTCTC 2 cut(s) 650, 931
BsmFI GGGAC 1 cut(s) 1056
BsmI GAATGC 1 cut(s) 794
BsnI GGCC 1 cut(s) 677
Bsp1286I GDGCHC 3 cut(s) 394, 641, 1089
Bsp1407I TGTACA 1 cut(s) 816
Bsp143I GATC 5 cut(s) 421, 469, 475, 612, 948
Bsp1720I GCTNAGC 1 cut(s) 1364
Bsp19I CCATGG 1 cut(s) 1263
BspACI CCGC 2 cut(s) 796, 884
BspANI GGCC 1 cut(s) 677
BspCNI CTCAG 6 cut(s) 654, 952, 1063, 1132, 1371, 1377
BspHI TCATGA 2 cut(s) 394, 1395
BspLI GGNNCC 3 cut(s) 444, 842, 1323
BspPI GGATC 1 cut(s) 416
BspQI GCTCTTC 1 cut(s) 1067
BspT107I GGYRCC 2 cut(s) 442, 1321
BsrDI GCAATG 3 cut(s) 759, 1084, 1207
BsrGI TGTACA 1 cut(s) 816
BsrI ACTGG 2 cut(s) 55, 509
BssECI CCNNGG 6 cut(s) 425, 555, 633, 844, 1263, 1325
BssMI GATC 5 cut(s) 421, 469, 475, 612, 948
BssNI GRCGYC 1 cut(s) 1322
BssT1I CCWWGG 4 cut(s) 555, 633, 1263, 1325
Bst2UI CCWGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
Bst4CI ACNGT 4 cut(s) 13, 533, 643, 733
Bst6I CTCTTC 2 cut(s) 186, 1067
BstACI GRCGYC 1 cut(s) 1322
BstAPI GCANNNNNTGC 1 cut(s) 1001
BstAUI TGTACA 1 cut(s) 816
BstC8I GCNNGC 2 cut(s) 608, 743
BstDEI CTNAG 7 cut(s) 662, 922, 939, 1050, 1140, 1358, 1364
BstDSI CCRYGG 1 cut(s) 1263
BstENI CCTNNNNNAGG 2 cut(s) 827, 1218
BstF5I GGATG 6 cut(s) 118, 436, 488, 953, 1104, 1258
BstH2I RGCGCY 2 cut(s) 1151, 1325
BstHHI GCGC 5 cut(s) 383, 899, 1032, 1150, 1324
BstKTI GATC 5 cut(s) 424, 472, 478, 615, 951
BstMAI GTCTC 2 cut(s) 650, 931
BstMBI GATC 5 cut(s) 421, 469, 475, 612, 948
BstMCI CGRYCG 3 cut(s) 361, 472, 796
BstMWI GCNNNNNNNGC 8 cut(s) 389, 560, 747, 756, 940, 1001, 1145, 1426
BstNI CCWGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
BstNSI RCATGY 1 cut(s) 1030
BstSCI CCNGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
BstSLI GKGCMC 1 cut(s) 641
BstV1I GCAGC 4 cut(s) 245, 550, 563, 712
BstV2I GAAGAC 2 cut(s) 727, 1395
BstX2I RGATCY 1 cut(s) 475
BstYI RGATCY 1 cut(s) 475
Bsu36I CCTNAGG 1 cut(s) 1358
BsuRI GGCC 1 cut(s) 677
BtgI CCRYGG 1 cut(s) 1263
BtsCI GGATG 6 cut(s) 118, 436, 488, 953, 1104, 1258
BtsIMutI CAGTG 3 cut(s) 9, 639, 729
Cac8I GCNNGC 2 cut(s) 608, 743
CaiI CAGNNNCTG 2 cut(s) 946, 1344
CciI TCATGA 2 cut(s) 394, 1395
CfoI GCGC 5 cut(s) 383, 899, 1032, 1150, 1324
CsiI ACCWGGT 2 cut(s) 702, 1192
Csp6I GTAC 1 cut(s) 817
CviQI GTAC 1 cut(s) 817
DdeI CTNAG 7 cut(s) 662, 922, 939, 1050, 1140, 1358, 1364
DinI GGCGCC 1 cut(s) 1323
DpnI GATC 5 cut(s) 423, 471, 477, 614, 950
DpnII GATC 5 cut(s) 421, 469, 475, 612, 948
DraIII CACNNNGTG 3 cut(s) 706, 814, 1001
Eam1104I CTCTTC 2 cut(s) 186, 1067
EarI CTCTTC 2 cut(s) 186, 1067
Ecl136II GAGCTC 1 cut(s) 392
Eco130I CCWWGG 4 cut(s) 555, 633, 1263, 1325
Eco24I GRGCYC 2 cut(s) 394, 1089
Eco32I GATATC 1 cut(s) 784
Eco53kI GAGCTC 1 cut(s) 392
Eco57I CTGAAG 2 cut(s) 721, 835
Eco81I CCTNAGG 1 cut(s) 1358
EcoICRI GAGCTC 1 cut(s) 392
EcoNI CCTNNNNNAGG 2 cut(s) 827, 1218
EcoRI GAATTC 1 cut(s) 293
EcoRII CCWGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
EcoRV GATATC 1 cut(s) 784
EcoT14I CCWWGG 4 cut(s) 555, 633, 1263, 1325
EcoT22I ATGCAT 1 cut(s) 436
EcoT38I GRGCYC 2 cut(s) 394, 1089
EgeI GGCGCC 1 cut(s) 1323
EheI GGCGCC 1 cut(s) 1323
ErhI CCWWGG 4 cut(s) 555, 633, 1263, 1325
FaqI GGGAC 1 cut(s) 1056
FbaI TGATCA 1 cut(s) 612
Fnu4HI GCNGC 4 cut(s) 234, 552, 564, 726
FokI GGATG 6 cut(s) 105, 443, 495, 940, 1111, 1265
FriOI GRGCYC 2 cut(s) 394, 1089
Fsp4HI GCNGC 4 cut(s) 234, 552, 564, 726
FspBI CTAG 2 cut(s) 647, 671
FspI TGCGCA 1 cut(s) 898
GlaI GCGC 5 cut(s) 382, 898, 1031, 1149, 1323
GluI GCNGC 4 cut(s) 234, 552, 564, 726
HaeII RGCGCY 2 cut(s) 1151, 1325
HaeIII GGCC 1 cut(s) 677
HapII CCGG 2 cut(s) 361, 387
HhaI GCGC 5 cut(s) 383, 899, 1032, 1150, 1324
Hin1I GRCGYC 1 cut(s) 1322
Hin6I GCGC 5 cut(s) 381, 897, 1030, 1148, 1322
HinP1I GCGC 5 cut(s) 381, 897, 1030, 1148, 1322
HindIII AAGCTT 1 cut(s) 748
HinfI GANTC 2 cut(s) 658, 1284
HpaII CCGG 2 cut(s) 361, 387
HphI GGTGA 5 cut(s) 77, 337, 535, 607, 1182
Hpy166II GTNNAC 4 cut(s) 9, 808, 817, 982
Hpy188I TCNGA 8 cut(s) 299, 596, 663, 854, 948, 967, 1232, 1289
Hpy188III TCNNGA 6 cut(s) 148, 272, 395, 473, 1377, 1396
Hpy8I GTNNAC 4 cut(s) 9, 808, 817, 982
Hpy99I CGWCG 1 cut(s) 1383
HpyAV CCTTC 5 cut(s) 88, 418, 633, 688, 1303
HpyCH4III ACNGT 4 cut(s) 13, 533, 643, 733
HpyCH4V TGCA 9 cut(s) 161, 228, 311, 434, 499, 764, 995, 1108, 1410
HpyF10VI GCNNNNNNNGC 8 cut(s) 389, 560, 747, 756, 940, 1001, 1145, 1426
HpyF3I CTNAG 7 cut(s) 662, 922, 939, 1050, 1140, 1358, 1364
Hsp92I GRCGYC 1 cut(s) 1322
HspAI GCGC 5 cut(s) 381, 897, 1030, 1148, 1322
KasI GGCGCC 1 cut(s) 1321
Ksp22I TGATCA 1 cut(s) 612
Kzo9I GATC 5 cut(s) 421, 469, 475, 612, 948
LguI GCTCTTC 1 cut(s) 1067
LmnI GCTCC 4 cut(s) 389, 530, 1119, 1123
Lsp1109I GCAGC 4 cut(s) 245, 550, 563, 712
LweI GCATC 4 cut(s) 421, 871, 952, 962
MabI ACCWGGT 2 cut(s) 702, 1192
MaeI CTAG 2 cut(s) 647, 671
MaeIII GTNAC 3 cut(s) 343, 541, 1188
MalI GATC 5 cut(s) 423, 471, 477, 614, 950
MboI GATC 5 cut(s) 421, 469, 475, 612, 948
MboII GAAGA 8 cut(s) 203, 217, 727, 791, 1084, 1191, 1342, 1400
MflI RGATCY 1 cut(s) 475
MhlI GDGCHC 3 cut(s) 394, 641, 1089
MluCI AATT 5 cut(s) 70, 293, 313, 892, 1269
Mly113I GGCGCC 1 cut(s) 1322
MlyI GAGTC 1 cut(s) 652
MmeI TCCRAC 1 cut(s) 552
Mph1103I ATGCAT 1 cut(s) 436
MseI TTAA 3 cut(s) 1176, 1277, 1450
MslI CAYNNNNRTG 1 cut(s) 1397
MspI CCGG 2 cut(s) 361, 387
MspR9I CCNGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
Mva1269I GAATGC 1 cut(s) 794
MvaI CCWGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
MwoI GCNNNNNNNGC 8 cut(s) 389, 560, 747, 756, 940, 1001, 1145, 1426
NarI GGCGCC 1 cut(s) 1322
NcoI CCATGG 1 cut(s) 1263
NdeII GATC 5 cut(s) 421, 469, 475, 612, 948
NlaIV GGNNCC 3 cut(s) 444, 842, 1323
NmuCI GTSAC 3 cut(s) 343, 541, 1188
NsbI TGCGCA 1 cut(s) 898
NsiI ATGCAT 1 cut(s) 436
NspI RCATGY 1 cut(s) 1030
PagI TCATGA 2 cut(s) 394, 1395
PciSI GCTCTTC 1 cut(s) 1067
PctI GAATGC 1 cut(s) 794
PfeI GAWTC 1 cut(s) 1284
PkrI GCNGC 4 cut(s) 235, 553, 565, 727
Ple19I CGATCG 1 cut(s) 472
PleI GAGTC 1 cut(s) 652
PluTI GGCGCC 1 cut(s) 1325
PpsI GAGTC 1 cut(s) 652
Psp124BI GAGCTC 1 cut(s) 394
Psp6I CCWGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
PspGI CCWGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
PspN4I GGNNCC 3 cut(s) 444, 842, 1323
PstNI CAGNNNCTG 2 cut(s) 946, 1344
PsuI RGATCY 1 cut(s) 475
PvuI CGATCG 1 cut(s) 472
RsaI GTAC 1 cut(s) 818
RsaNI GTAC 1 cut(s) 817
RseI CAYNNNNRTG 1 cut(s) 1397
SacI GAGCTC 1 cut(s) 394
SapI GCTCTTC 1 cut(s) 1067
SaqAI TTAA 3 cut(s) 1176, 1277, 1450
SatI GCNGC 4 cut(s) 234, 552, 564, 726
Sau3AI GATC 5 cut(s) 421, 469, 475, 612, 948
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 6 cut(s) 426, 462, 704, 846, 1194, 1221
SduI GDGCHC 3 cut(s) 394, 641, 1089
SexAI ACCWGGT 2 cut(s) 702, 1192
SfaNI GCATC 4 cut(s) 421, 871, 952, 962
SfoI GGCGCC 1 cut(s) 1323
SmiMI CAYNNNNRTG 1 cut(s) 1397
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
Sse9I AATT 5 cut(s) 70, 293, 313, 892, 1269
SsiI CCGC 2 cut(s) 796, 884
SspDI GGCGCC 1 cut(s) 1321
SspMI CTAG 2 cut(s) 647, 671
SstI GAGCTC 1 cut(s) 394
StyD4I CCNGG 6 cut(s) 424, 460, 702, 844, 1192, 1219
StyI CCWWGG 4 cut(s) 555, 633, 1263, 1325
TaaI ACNGT 4 cut(s) 13, 533, 643, 733
TaqI TCGA 5 cut(s) 468, 472, 786, 1282, 1438
TasI AATT 5 cut(s) 70, 293, 313, 892, 1269
TatI WGTACW 1 cut(s) 816
TfiI GAWTC 1 cut(s) 1284
Tru1I TTAA 3 cut(s) 1176, 1277, 1450
Tru9I TTAA 3 cut(s) 1176, 1277, 1450
TscAI CASTG 3 cut(s) 16, 646, 736
TseFI GTSAC 3 cut(s) 343, 541, 1188
TseI GCWGC 4 cut(s) 233, 551, 563, 725
Tsp45I GTSAC 3 cut(s) 343, 541, 1188
TspDTI ATGAA 7 cut(s) 107, 307, 670, 702, 729, 742, 1185
TspRI CASTG 3 cut(s) 16, 646, 736
XagI CCTNNNNNAGG 2 cut(s) 827, 1218
XapI RAATTY 3 cut(s) 70, 293, 313
XceI RCATGY 1 cut(s) 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XspI CTAG 2 cut(s) 647, 671
Zsp2I ATGCAT 1 cut(s) 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.