MD14G1221100.v1.1

Oleosin 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0015955
Physical Location & Seq
Forward (+)
30282015 .. 30282530
516 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1221100.v1.1.491

Sequence Viewer

Length: 516 bp
ATGGCTGACCGTCACCAAAACCCAACACAAACCCACCAGCAGCAGCCGCAGAGAGCTCCGAGACCCAGCCCTAACACCCCCACAAATTCCTCAATATTCCTACGTAAACTCCAAGGCCATGCACCCAACTCCACCCAGCTCGTCGGCTTTCTCACCCTCCTCGTCTCCGGCGCCATTCTCCTCCTCCTCACCGGTCTTACCGTCACCGCCACCGTCCTCGGCCTAGTCATCTTCACCCCTATCATCATCATCTCCAGTCCCATATGGGTCCCCCTCGGCGCCATCCTCGTCCTCACGGTCGGCTTCTTCGTGTCCATGTGCGGGTTTGGCGCCGCGGCCGTGGCTGGTTTGTCTTGGATGTATAGGTATTTCAAGGGGATGCACCCGCCCGGTTCGGACCGGGTTGACTACGCCAGGAGCCGGATTTACGATACGGCGAGCCATGTCAAGGATTATGCTAGAGAGTACGGCGGGTATTTGCACAGTAAGGTCAAGGATGCAGCTCCCGGTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

172

Amino Acids

18.52

Weight (kDa)

9.86

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 45 - 157 5.6e-45 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015955)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48990 AT3G18570
fragaria_vesca FvH4_5g12770
malus_domestica MD06G1210400.v1.1 MD14G1221100.v1.1 MD17G1068400.v1.1
prunus_persica Prupe.5G216500_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0184461
rosa_laevigata RLG00000004973
rosa_multiflora Rmu_sc0001557.1_g000014
rosa_roxburghii Rroxscaffold_3G00269590
rosa_samantha Rh7BG067500 Rh7CG067800 Rh7DG067500
rosa_wichuraiana Rw7G005560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 170, 278, 329
AccII CGCG 1 cut(s) 335
AciI CCGC 7 cut(s) 47, 207, 321, 333, 335, 386, 471
AcoI YGGCCR 1 cut(s) 336
AcsI RAATTY 1 cut(s) 85
AcyI GRCGYC 3 cut(s) 171, 279, 330
AfaI GTAC 1 cut(s) 467
AfiI CCNNNNNNNGG 3 cut(s) 321, 420, 448
AgeI ACCGGT 1 cut(s) 191
AgsI TTSAA 1 cut(s) 373
AjnI CCWGG 1 cut(s) 413
AluBI AGCT 3 cut(s) 56, 139, 503
AluI AGCT 3 cut(s) 56, 139, 503
Alw21I GWGCWC 1 cut(s) 58
Alw26I GTCTC 2 cut(s) 55, 169
AoxI GGCC 3 cut(s) 115, 220, 336
ApeKI GCWGC 3 cut(s) 40, 43, 500
ApoI RAATTY 1 cut(s) 85
AsiGI ACCGGT 1 cut(s) 191
AspLEI GCGC 3 cut(s) 173, 281, 332
AspS9I GGNCC 2 cut(s) 268, 397
AsuC2I CCSGG 3 cut(s) 390, 401, 507
AsuHPI GGTGA 5 cut(s) 5, 145, 181, 196, 226
AvaII GGWCC 2 cut(s) 268, 397
BanI GGYRCC 3 cut(s) 170, 278, 329
BanII GRGCYC 1 cut(s) 58
Bbv12I GWGCWC 1 cut(s) 58
BbvI GCAGC 3 cut(s) 52, 55, 512
BccI CCATC 1 cut(s) 290
BceAI ACGGC 3 cut(s) 323, 450, 484
BciT130I CCWGG 1 cut(s) 415
BcnI CCSGG 3 cut(s) 390, 401, 507
BcoDI GTCTC 2 cut(s) 55, 169
BfaI CTAG 2 cut(s) 224, 459
BfoI RGCGCY 3 cut(s) 174, 282, 333
BisI GCNGC 6 cut(s) 41, 44, 47, 333, 336, 501
BlsI GCNGC 6 cut(s) 42, 45, 48, 334, 337, 502
Bme1390I CCNGG 4 cut(s) 390, 401, 415, 507
Bme18I GGWCC 2 cut(s) 268, 397
BmgT120I GGNCC 2 cut(s) 268, 397
BmiI GGNNCC 6 cut(s) 172, 269, 270, 280, 331, 419
BmrFI CCNGG 4 cut(s) 390, 401, 415, 507
BmsI GCATC 2 cut(s) 369, 487
BpmI CTGGAG 1 cut(s) 238
BpuMI CCSGG 3 cut(s) 390, 401, 507
BsaAI YACGTR 1 cut(s) 104
BsaHI GRCGYC 3 cut(s) 171, 279, 330
BsaI GGTCTC 1 cut(s) 55
BsaJI CCNNGG 5 cut(s) 112, 217, 274, 333, 339
BsaWI WCCGGW 1 cut(s) 191
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 3 cut(s) 321, 420, 448
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 1 cut(s) 255
BseBI CCWGG 1 cut(s) 415
BseDI CCNNGG 5 cut(s) 112, 217, 274, 333, 339
BseGI GGATG 4 cut(s) 282, 363, 384, 502
BseLI CCNNNNNNNGG 3 cut(s) 321, 420, 448
BseNI ACTGG 1 cut(s) 255
BseRI GAGGAG 4 cut(s) 149, 170, 173, 176
BseX3I CGGCCG 1 cut(s) 336
BseXI GCAGC 3 cut(s) 52, 55, 512
BseYI CCCAGC 2 cut(s) 65, 135
Bsh1236I CGCG 1 cut(s) 335
Bsh1285I CGRYCG 2 cut(s) 300, 339
BshFI GGCC 3 cut(s) 117, 222, 338
BshNI GGYRCC 3 cut(s) 170, 278, 329
BshTI ACCGGT 1 cut(s) 191
BsiEI CGRYCG 2 cut(s) 300, 339
BsiHKAI GWGCWC 1 cut(s) 58
BsiSI CCGG 6 cut(s) 168, 192, 390, 400, 421, 507
BslFI GGGAC 2 cut(s) 243, 254
BslI CCNNNNNNNGG 3 cut(s) 321, 420, 448
BsmAI GTCTC 2 cut(s) 55, 169
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 2 cut(s) 243, 254
BsnI GGCC 3 cut(s) 117, 222, 338
Bso31I GGTCTC 1 cut(s) 55
Bsp1286I GDGCHC 1 cut(s) 58
BspACI CCGC 7 cut(s) 47, 207, 321, 333, 335, 386, 471
BspANI GGCC 3 cut(s) 117, 222, 338
BspFNI CGCG 1 cut(s) 335
BspLI GGNNCC 6 cut(s) 172, 269, 270, 280, 331, 419
BspT107I GGYRCC 3 cut(s) 170, 278, 329
BspTNI GGTCTC 1 cut(s) 55
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 1 cut(s) 255
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 5 cut(s) 112, 217, 274, 333, 339
BssNI GRCGYC 3 cut(s) 171, 279, 330
BssT1I CCWWGG 1 cut(s) 112
Bst2UI CCWGG 1 cut(s) 415
Bst4CI ACNGT 5 cut(s) 11, 202, 214, 298, 485
BstACI GRCGYC 3 cut(s) 171, 279, 330
BstBAI YACGTR 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 439
BstDSI CCRYGG 2 cut(s) 333, 339
BstF5I GGATG 4 cut(s) 282, 363, 384, 502
BstFNI CGCG 1 cut(s) 335
BstH2I RGCGCY 3 cut(s) 174, 282, 333
BstHHI GCGC 3 cut(s) 173, 281, 332
BstMAI GTCTC 2 cut(s) 55, 169
BstMCI CGRYCG 2 cut(s) 300, 339
BstMWI GCNNNNNNNGC 4 cut(s) 46, 327, 341, 509
BstNI CCWGG 1 cut(s) 415
BstSCI CCNGG 4 cut(s) 388, 399, 413, 505
BstSNI TACGTA 1 cut(s) 104
BstUI CGCG 1 cut(s) 335
BstV1I GCAGC 3 cut(s) 52, 55, 512
BstZI CGGCCG 1 cut(s) 336
BsuRI GGCC 3 cut(s) 117, 222, 338
BtgI CCRYGG 2 cut(s) 333, 339
BtsCI GGATG 4 cut(s) 282, 363, 384, 502
Cac8I GCNNGC 1 cut(s) 439
CfoI GCGC 3 cut(s) 173, 281, 332
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 2 cut(s) 268, 397
Cfr42I CCGCGG 1 cut(s) 336
CpoI CGGWCCG 1 cut(s) 397
Csp6I GTAC 1 cut(s) 466
CspAI ACCGGT 1 cut(s) 191
CspI CGGWCCG 1 cut(s) 397
CviAII CATG 3 cut(s) 119, 316, 443
CviQI GTAC 1 cut(s) 466
DinI GGCGCC 3 cut(s) 172, 280, 331
EaeI YGGCCR 1 cut(s) 336
EagI CGGCCG 1 cut(s) 336
Ecl136II GAGCTC 1 cut(s) 56
EclXI CGGCCG 1 cut(s) 336
Eco105I TACGTA 1 cut(s) 104
Eco130I CCWWGG 1 cut(s) 112
Eco24I GRGCYC 1 cut(s) 58
Eco31I GGTCTC 1 cut(s) 55
Eco47I GGWCC 2 cut(s) 268, 397
Eco52I CGGCCG 1 cut(s) 336
Eco53kI GAGCTC 1 cut(s) 56
EcoICRI GAGCTC 1 cut(s) 56
EcoO109I RGGNCCY 1 cut(s) 268
EcoRII CCWGG 1 cut(s) 413
EcoT14I CCWWGG 1 cut(s) 112
EcoT38I GRGCYC 1 cut(s) 58
EgeI GGCGCC 3 cut(s) 172, 280, 331
EheI GGCGCC 3 cut(s) 172, 280, 331
ErhI CCWWGG 1 cut(s) 112
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 3 cut(s) 122, 319, 446
FaiI YATR 7 cut(s) 120, 263, 265, 317, 363, 444, 456
FaqI GGGAC 2 cut(s) 243, 254
FatI CATG 3 cut(s) 118, 315, 442
FauI CCCGC 3 cut(s) 314, 393, 464
FauNDI CATATG 1 cut(s) 263
Fnu4HI GCNGC 6 cut(s) 41, 44, 47, 333, 336, 501
FokI GGATG 4 cut(s) 269, 370, 391, 509
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 6 cut(s) 41, 44, 47, 333, 336, 501
FspBI CTAG 2 cut(s) 224, 459
GlaI GCGC 3 cut(s) 172, 280, 331
GluI GCNGC 6 cut(s) 41, 44, 47, 333, 336, 501
GsaI CCCAGC 2 cut(s) 69, 139
GsuI CTGGAG 1 cut(s) 238
HaeII RGCGCY 3 cut(s) 174, 282, 333
HaeIII GGCC 3 cut(s) 117, 222, 338
HapII CCGG 6 cut(s) 168, 192, 390, 400, 421, 507
HhaI GCGC 3 cut(s) 173, 281, 332
Hin1I GRCGYC 3 cut(s) 171, 279, 330
Hin1II CATG 3 cut(s) 122, 319, 446
Hin6I GCGC 3 cut(s) 171, 279, 330
HinP1I GCGC 3 cut(s) 171, 279, 330
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HpaII CCGG 6 cut(s) 168, 192, 390, 400, 421, 507
HphI GGTGA 5 cut(s) 5, 145, 181, 196, 226
Hpy166II GTNNAC 2 cut(s) 107, 406
Hpy188I TCNGA 2 cut(s) 60, 397
Hpy8I GTNNAC 2 cut(s) 107, 406
Hpy99I CGWCG 1 cut(s) 146
HpyCH4III ACNGT 5 cut(s) 11, 202, 214, 298, 485
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 4 cut(s) 122, 382, 481, 500
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 327, 341, 509
HpySE526I ACGT 1 cut(s) 103
Hsp92I GRCGYC 3 cut(s) 171, 279, 330
Hsp92II CATG 3 cut(s) 122, 319, 446
HspAI GCGC 3 cut(s) 171, 279, 330
KasI GGCGCC 3 cut(s) 170, 278, 329
KflI GGGWCCC 1 cut(s) 268
KspI CCGCGG 1 cut(s) 336
LmnI GCTCC 3 cut(s) 61, 417, 508
Lsp1109I GCAGC 3 cut(s) 52, 55, 512
LweI GCATC 2 cut(s) 369, 487
MaeI CTAG 2 cut(s) 224, 459
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 2 cut(s) 11, 202
MboII GAAGA 2 cut(s) 223, 298
MhlI GDGCHC 1 cut(s) 58
MluCI AATT 1 cut(s) 85
Mly113I GGCGCC 3 cut(s) 171, 279, 330
MseI TTAA 1 cut(s) 514
MspA1I CMGCKG 1 cut(s) 335
MspI CCGG 6 cut(s) 168, 192, 390, 400, 421, 507
MspR9I CCNGG 4 cut(s) 390, 401, 415, 507
MvaI CCWGG 1 cut(s) 415
MvnI CGCG 1 cut(s) 335
MwoI GCNNNNNNNGC 4 cut(s) 46, 327, 341, 509
NarI GGCGCC 3 cut(s) 171, 279, 330
NciI CCSGG 3 cut(s) 390, 401, 507
NdeI CATATG 1 cut(s) 263
NlaIII CATG 3 cut(s) 122, 319, 446
NlaIV GGNNCC 6 cut(s) 172, 269, 270, 280, 331, 419
NmeAIII GCCGAG 2 cut(s) 198, 255
NmuCI GTSAC 2 cut(s) 11, 202
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PinAI ACCGGT 1 cut(s) 191
PkrI GCNGC 6 cut(s) 42, 45, 48, 334, 337, 502
PluTI GGCGCC 3 cut(s) 174, 282, 333
Ppu21I YACGTR 1 cut(s) 104
PpuMI RGGWCCY 1 cut(s) 268
Psp124BI GAGCTC 1 cut(s) 58
Psp5II RGGWCCY 1 cut(s) 268
Psp6I CCWGG 1 cut(s) 413
PspFI CCCAGC 2 cut(s) 65, 135
PspGI CCWGG 1 cut(s) 413
PspN4I GGNNCC 6 cut(s) 172, 269, 270, 280, 331, 419
PspPI GGNCC 2 cut(s) 268, 397
PspPPI RGGWCCY 1 cut(s) 268
RsaI GTAC 1 cut(s) 467
RsaNI GTAC 1 cut(s) 466
Rsr2I CGGWCCG 1 cut(s) 397
RsrII CGGWCCG 1 cut(s) 397
SacI GAGCTC 1 cut(s) 58
SacII CCGCGG 1 cut(s) 336
SaqAI TTAA 1 cut(s) 514
SatI GCNGC 6 cut(s) 41, 44, 47, 333, 336, 501
Sau96I GGNCC 2 cut(s) 268, 397
ScrFI CCNGG 4 cut(s) 390, 401, 415, 507
SduI GDGCHC 1 cut(s) 58
SetI ASST 6 cut(s) 58, 106, 141, 368, 492, 505
SfaNI GCATC 2 cut(s) 369, 487
SfoI GGCGCC 3 cut(s) 172, 280, 331
Sfr303I CCGCGG 1 cut(s) 336
SgrBI CCGCGG 1 cut(s) 336
SinI GGWCC 2 cut(s) 268, 397
SnaBI TACGTA 1 cut(s) 104
Sse9I AATT 1 cut(s) 85
SsiI CCGC 7 cut(s) 47, 207, 321, 333, 335, 386, 471
SspDI GGCGCC 3 cut(s) 170, 278, 329
SspI AATATT 1 cut(s) 96
SspMI CTAG 2 cut(s) 224, 459
SstI GAGCTC 1 cut(s) 58
StyD4I CCNGG 4 cut(s) 388, 399, 413, 505
StyI CCWWGG 1 cut(s) 112
TaaI ACNGT 5 cut(s) 11, 202, 214, 298, 485
TaiI ACGT 1 cut(s) 106
TasI AATT 1 cut(s) 85
TauI GCSGC 3 cut(s) 49, 335, 338
Tru1I TTAA 1 cut(s) 514
Tru9I TTAA 1 cut(s) 514
TseFI GTSAC 2 cut(s) 11, 202
TseI GCWGC 3 cut(s) 40, 43, 500
Tsp45I GTSAC 2 cut(s) 11, 202
VpaK11BI GGWCC 2 cut(s) 268, 397
XapI RAATTY 1 cut(s) 85
XspI CTAG 2 cut(s) 224, 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.