MD14G1232000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
31231533 .. 31235544
4012 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1232000.v1.1.491

Sequence Viewer

Length: 1245 bp
ATGGCAGAGGTCGATCTGACGAAGAAAGTGGCGGATAGGTATCTGAAGCGCGAGGTTCTTGGTGAAGGTACCTATGGAGTCGTCTACAAAGCCATCGATACGAAGACGGGACAGACGGTTGCTATTAAAAAAATTCGTCTTGGGAAGCAAAAGGAAGGGGTGAATTTCACAGCACTTAGAGAAATTAAACTGCTTAAAGAGCTGAAGGATCCGAACATTATTGAGTTGATTGAAGCATTCCCGCATAAAGGAAACTTGCATCTTGTATTTGAGTTCATGGAGACGGACCTTGAAGCTGTTATACGTGACCGGAATATATTTTTATCACCAGCTGACATAAAGTCATATCTTCAGATGACTTTAAAAGGACTTGCTGTTTGCCACAAGAAATGGGTTTTACACAGGGATATGAAGCCTAACAACTTGTTGATAGGATCTAACGGGCAGCTTAAACTGGCAGATTTTGGTTTAGCACGAATATTTGGGAGCCCAGATCGCAGGTTCACTCATCAGGTTTTTGCCCGTTGGTATAGAGCACCTGAGTTGTTATTTGGCACCAAGCAATATGGACCTGGGGTAGATGTTTGGGCTGCAGCTTGTATATTCGCTGAACTTCTCCTACGCAGACCCTTTTTGCAGGGATCAAGTGATATTGATCAACTAGGAAAGATTTTTGCGGCTTTTGGGACTCCAACACCTTCTCAGTGGCCTGATATGGTATACCTCCCGGATTATGTGGAATACCAATATGTTCCAGCACCCCCTTTGCGTTCATTGTTTCCAGTGGCTAGTGATGATGCCCTAGATTTGTTAGCGAAGATGTTTACCTATGACCCCAAAGCTAGAATATCCGTACAGCAGGCATTAGAGCACAGGTACTTTACATCTGCGCCTCTTCCTACATATCCAGATAAGCTTCCTAGACCTGCTCCAAAGCGGGAGTCTAAGGGTTCAGATTTTAATCCAAATGATGGTCCTACTGTGTTATCACCTCCACGAAAATCAAGGAGAGTGATGCCAGAGCGTGATGGTTTTGAAGGAAATTCACACGTTGATAAGATTGATGATCGTTTTGGTGAAGCCAGACATGCTGCTGGTGAAAATACAAGCAGGAATGAACCGGTGCCAATGTCAGTTGATTTTTCTATCTTTGGAGCAAAACCTCCAAATAGACCTACAATTAATAGTGCTGACAGAACACATCTAAAGAGGAAACTAGATCTTGAATTTCAACTGCCTGAATAA

Protein Analysis

415

Amino Acids

46.89

Weight (kDa)

9.18

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 294 3.9e-70 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 237 2e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 489, 934
Acc65I GGTACC 1 cut(s) 68
AccB1I GGYRCC 3 cut(s) 68, 554, 1123
AccB7I CCANNNNNTGG 1 cut(s) 971
AccI GTMKAC 2 cut(s) 84, 720
AccII CGCG 1 cut(s) 51
AciI CCGC 4 cut(s) 32, 242, 677, 937
AclWI GGATC 4 cut(s) 203, 216, 442, 649
AcsI RAATTY 4 cut(s) 132, 163, 1042, 1226
AcuI CTGAAG 3 cut(s) 65, 224, 335
AfaI GTAC 3 cut(s) 70, 855, 878
AfiI CCNNNNNNNGG 2 cut(s) 248, 971
AflIII ACRYGT 1 cut(s) 1048
AgeI ACCGGT 1 cut(s) 1120
AgsI TTSAA 5 cut(s) 233, 293, 1037, 1226, 1232
AhdI GACNNNNNGTC 1 cut(s) 340
AjnI CCWGG 1 cut(s) 571
AluBI AGCT 7 cut(s) 202, 296, 332, 448, 596, 842, 916
AluI AGCT 7 cut(s) 202, 296, 332, 448, 596, 842, 916
Alw21I GWGCWC 2 cut(s) 538, 873
Alw26I GTCTC 1 cut(s) 275
AlwI GGATC 4 cut(s) 203, 216, 442, 649
AoxI GGCC 1 cut(s) 707
ApeKI GCWGC 4 cut(s) 445, 590, 593, 1091
ApoI RAATTY 4 cut(s) 132, 163, 1042, 1226
ArsI GACNNNNNNTTYG 4 cut(s) 360, 392, 926, 958
AseI ATTAAT 1 cut(s) 1182
AsiGI ACCGGT 1 cut(s) 1120
Asp718I GGTACC 1 cut(s) 68
AspLEI GCGC 2 cut(s) 51, 892
AspS9I GGNCC 3 cut(s) 286, 569, 974
AsuC2I CCSGG 1 cut(s) 728
AsuHPI GGTGA 6 cut(s) 74, 172, 318, 981, 1088, 1109
AvaII GGWCC 3 cut(s) 286, 569, 974
BamHI GGATCC 1 cut(s) 208
BanI GGYRCC 3 cut(s) 68, 554, 1123
BanII GRGCYC 1 cut(s) 491
BarI GAAGNNNNNNTAC 2 cut(s) 285, 317
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 2 cut(s) 538, 873
BbvI GCAGC 4 cut(s) 457, 577, 605, 1078
BccI CCATC 3 cut(s) 101, 965, 1022
BciT130I CCWGG 1 cut(s) 573
BclI TGATCA 1 cut(s) 655
BcnI CCSGG 1 cut(s) 728
BcoDI GTCTC 1 cut(s) 275
BfaI CTAG 6 cut(s) 662, 789, 803, 843, 921, 1217
BfmI CTRYAG 1 cut(s) 591
BfuAI ACCTGC 2 cut(s) 489, 934
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 5 cut(s) 446, 591, 594, 678, 1092
BlsI GCNGC 5 cut(s) 447, 592, 595, 679, 1093
Bme1390I CCNGG 2 cut(s) 573, 728
Bme18I GGWCC 3 cut(s) 286, 569, 974
BmeRI GACNNNNNGTC 1 cut(s) 340
BmgT120I GGNCC 3 cut(s) 286, 569, 974
BmiI GGNNCC 5 cut(s) 70, 210, 488, 556, 1125
BmrFI CCNGG 2 cut(s) 573, 728
BmsI GCATC 3 cut(s) 268, 787, 1005
BpiI GAAGAC 1 cut(s) 110
BpuMI CCSGG 1 cut(s) 728
Bsa29I ATCGAT 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 305
BsaBI GATNNNNATC 3 cut(s) 39, 654, 960
BsaJI CCNNGG 1 cut(s) 572
BsaWI WCCGGW 2 cut(s) 309, 1120
Bsc4I CCNNNNNNNGG 2 cut(s) 248, 971
Bse118I RCCGGY 1 cut(s) 1120
Bse1I ACTGG 2 cut(s) 459, 782
Bse8I GATNNNNATC 3 cut(s) 39, 654, 960
BseBI CCWGG 1 cut(s) 573
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 572
BseJI GATNNNNATC 3 cut(s) 39, 654, 960
BseLI CCNNNNNNNGG 2 cut(s) 248, 971
BseMII CTCAG 2 cut(s) 531, 716
BseNI ACTGG 2 cut(s) 459, 782
BseXI GCAGC 4 cut(s) 457, 577, 605, 1078
Bsh1236I CGCG 1 cut(s) 51
BshFI GGCC 1 cut(s) 709
BshNI GGYRCC 3 cut(s) 68, 554, 1123
BshTI ACCGGT 1 cut(s) 1120
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 2 cut(s) 538, 873
BsiSI CCGG 3 cut(s) 310, 728, 1121
BslFI GGGAC 2 cut(s) 123, 700
BslI CCNNNNNNNGG 2 cut(s) 248, 971
BsmAI GTCTC 1 cut(s) 275
BsmBI CGTCTC 1 cut(s) 275
BsmFI GGGAC 2 cut(s) 123, 700
BsmI GAATGC 1 cut(s) 236
BsnI GGCC 1 cut(s) 709
Bsp1286I GDGCHC 3 cut(s) 491, 538, 873
Bsp143I GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
BspACI CCGC 4 cut(s) 32, 242, 677, 937
BspANI GGCC 1 cut(s) 709
BspCNI CTCAG 2 cut(s) 532, 715
BspDI ATCGAT 1 cut(s) 96
BspFNI CGCG 1 cut(s) 51
BspLI GGNNCC 5 cut(s) 70, 210, 488, 556, 1125
BspMAI CTGCAG 1 cut(s) 595
BspMI ACCTGC 2 cut(s) 489, 934
BspPI GGATC 4 cut(s) 203, 216, 442, 649
BspT107I GGYRCC 3 cut(s) 68, 554, 1123
BsrFI RCCGGY 1 cut(s) 1120
BsrI ACTGG 2 cut(s) 459, 782
BssAI RCCGGY 1 cut(s) 1120
BssECI CCNNGG 1 cut(s) 572
BssMI GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
BssNAI GTATAC 1 cut(s) 721
Bst1107I GTATAC 1 cut(s) 721
Bst2UI CCWGG 1 cut(s) 573
Bst4CI ACNGT 2 cut(s) 118, 982
Bst6I CTCTTC 1 cut(s) 900
BstBAI YACGTR 1 cut(s) 305
BstC8I GCNNGC 1 cut(s) 861
BstDEI CTNAG 4 cut(s) 176, 540, 702, 945
BstFNI CGCG 1 cut(s) 51
BstHHI GCGC 2 cut(s) 51, 892
BstKTI GATC 8 cut(s) 16, 211, 437, 496, 644, 658, 1069, 1222
BstMAI GTCTC 1 cut(s) 275
BstMBI GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
BstMWI GCNNNNNNNGC 3 cut(s) 199, 495, 1088
BstNI CCWGG 1 cut(s) 573
BstNSI RCATGY 1 cut(s) 1091
BstSCI CCNGG 2 cut(s) 571, 726
BstSFI CTRYAG 1 cut(s) 591
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 4 cut(s) 457, 577, 605, 1078
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 3 cut(s) 208, 434, 1219
BstYI RGATCY 3 cut(s) 208, 434, 1219
BstZ17I GTATAC 1 cut(s) 721
Bsu15I ATCGAT 1 cut(s) 96
BsuRI GGCC 1 cut(s) 709
BsuTUI ATCGAT 1 cut(s) 96
BtsIMutI CAGTG 2 cut(s) 710, 789
BveI ACCTGC 2 cut(s) 489, 934
Cac8I GCNNGC 1 cut(s) 861
CfoI GCGC 2 cut(s) 51, 892
Cfr10I RCCGGY 1 cut(s) 1120
Cfr13I GGNCC 3 cut(s) 286, 569, 974
ClaI ATCGAT 1 cut(s) 96
Csp6I GTAC 3 cut(s) 69, 854, 877
CspAI ACCGGT 1 cut(s) 1120
CviAII CATG 2 cut(s) 277, 1088
CviQI GTAC 3 cut(s) 69, 854, 877
DdeI CTNAG 4 cut(s) 176, 540, 702, 945
DpnI GATC 8 cut(s) 15, 210, 436, 495, 643, 657, 1068, 1221
DpnII GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
DraI TTTAAA 1 cut(s) 363
DriI GACNNNNNGTC 1 cut(s) 340
Eam1104I CTCTTC 1 cut(s) 900
Eam1105I GACNNNNNGTC 1 cut(s) 340
EarI CTCTTC 1 cut(s) 900
EciI GGCGGA 1 cut(s) 47
Eco24I GRGCYC 1 cut(s) 491
Eco47I GGWCC 3 cut(s) 286, 569, 974
Eco57I CTGAAG 3 cut(s) 65, 224, 335
EcoRII CCWGG 1 cut(s) 571
EcoT38I GRGCYC 1 cut(s) 491
Esp3I CGTCTC 1 cut(s) 275
FaeI CATG 2 cut(s) 280, 1091
FaqI GGGAC 2 cut(s) 123, 700
FatI CATG 2 cut(s) 276, 1087
FauI CCCGC 2 cut(s) 249, 930
FbaI TGATCA 1 cut(s) 655
FblI GTMKAC 2 cut(s) 84, 720
Fnu4HI GCNGC 5 cut(s) 446, 591, 594, 678, 1092
FriOI GRGCYC 1 cut(s) 491
Fsp4HI GCNGC 5 cut(s) 446, 591, 594, 678, 1092
FspBI CTAG 6 cut(s) 662, 789, 803, 843, 921, 1217
GlaI GCGC 2 cut(s) 50, 891
GluI GCNGC 5 cut(s) 446, 591, 594, 678, 1092
HaeIII GGCC 1 cut(s) 709
HapII CCGG 3 cut(s) 310, 728, 1121
HhaI GCGC 2 cut(s) 51, 892
Hin1II CATG 2 cut(s) 280, 1091
Hin6I GCGC 2 cut(s) 49, 890
HinP1I GCGC 2 cut(s) 49, 890
HindIII AAGCTT 1 cut(s) 914
HinfI GANTC 3 cut(s) 78, 688, 941
HpaII CCGG 3 cut(s) 310, 728, 1121
HphI GGTGA 6 cut(s) 74, 172, 318, 981, 1088, 1109
Hpy166II GTNNAC 4 cut(s) 85, 504, 721, 825
Hpy188I TCNGA 5 cut(s) 18, 45, 213, 354, 955
Hpy188III TCNNGA 2 cut(s) 908, 1223
Hpy8I GTNNAC 4 cut(s) 85, 504, 721, 825
HpyAV CCTTC 5 cut(s) 59, 149, 199, 708, 1031
HpyCH4III ACNGT 2 cut(s) 118, 982
HpyCH4IV ACGT 2 cut(s) 304, 1050
HpyCH4V TGCA 3 cut(s) 259, 593, 637
HpyF10VI GCNNNNNNNGC 3 cut(s) 199, 495, 1088
HpyF3I CTNAG 4 cut(s) 176, 540, 702, 945
HpySE526I ACGT 2 cut(s) 304, 1050
Hsp92II CATG 2 cut(s) 280, 1091
HspAI GCGC 2 cut(s) 49, 890
KpnI GGTACC 1 cut(s) 72
Ksp22I TGATCA 1 cut(s) 655
Kzo9I GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
LmnI GCTCC 3 cut(s) 486, 934, 1154
Lsp1109I GCAGC 4 cut(s) 457, 577, 605, 1078
LweI GCATC 3 cut(s) 268, 787, 1005
MaeI CTAG 6 cut(s) 662, 789, 803, 843, 921, 1217
MaeII ACGT 2 cut(s) 304, 1050
MaeIII GTNAC 1 cut(s) 305
MalI GATC 8 cut(s) 15, 210, 436, 495, 643, 657, 1068, 1221
MboI GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
MboII GAAGA 5 cut(s) 34, 115, 341, 829, 887
MflI RGATCY 3 cut(s) 208, 434, 1219
MhlI GDGCHC 3 cut(s) 491, 538, 873
MluCI AATT 6 cut(s) 132, 163, 183, 1042, 1179, 1226
MlyI GAGTC 3 cut(s) 87, 682, 950
MmeI TCCRAC 1 cut(s) 716
MnlI CCTC 6 cut(s) 46, 734, 903, 1002, 1173, 1203
MseI TTAA 7 cut(s) 126, 186, 195, 362, 450, 960, 1182
MspA1I CMGCKG 1 cut(s) 332
MspI CCGG 3 cut(s) 310, 728, 1121
MspR9I CCNGG 2 cut(s) 573, 728
Mva1269I GAATGC 1 cut(s) 236
MvaI CCWGG 1 cut(s) 573
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 3 cut(s) 199, 495, 1088
NciI CCSGG 1 cut(s) 728
NdeII GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
NlaIII CATG 2 cut(s) 280, 1091
NlaIV GGNNCC 5 cut(s) 70, 210, 488, 556, 1125
NmuCI GTSAC 1 cut(s) 305
NspI RCATGY 1 cut(s) 1091
PctI GAATGC 1 cut(s) 236
PflMI CCANNNNNTGG 1 cut(s) 971
PfoI TCCNGGA 1 cut(s) 726
PinAI ACCGGT 1 cut(s) 1120
PkrI GCNGC 5 cut(s) 447, 592, 595, 679, 1093
PleI GAGTC 3 cut(s) 86, 682, 949
PpsI GAGTC 3 cut(s) 86, 682, 949
Ppu21I YACGTR 1 cut(s) 305
PshBI ATTAAT 1 cut(s) 1182
Psp6I CCWGG 1 cut(s) 571
PspGI CCWGG 1 cut(s) 571
PspN4I GGNNCC 5 cut(s) 70, 210, 488, 556, 1125
PspPI GGNCC 3 cut(s) 286, 569, 974
PsrI GAACNNNNNNTAC 2 cut(s) 603, 635
PstI CTGCAG 1 cut(s) 595
PsuI RGATCY 3 cut(s) 208, 434, 1219
PvuII CAGCTG 1 cut(s) 332
RsaI GTAC 3 cut(s) 70, 855, 878
RsaNI GTAC 3 cut(s) 69, 854, 877
SaqAI TTAA 7 cut(s) 126, 186, 195, 362, 450, 960, 1182
SatI GCNGC 5 cut(s) 446, 591, 594, 678, 1092
Sau3AI GATC 8 cut(s) 13, 208, 434, 493, 641, 655, 1066, 1219
Sau96I GGNCC 3 cut(s) 286, 569, 974
SchI GAGTC 3 cut(s) 87, 682, 950
ScrFI CCNGG 2 cut(s) 573, 728
SduI GDGCHC 3 cut(s) 491, 538, 873
SfaNI GCATC 3 cut(s) 268, 787, 1005
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 3 cut(s) 286, 569, 974
Sse9I AATT 6 cut(s) 132, 163, 183, 1042, 1179, 1226
SsiI CCGC 4 cut(s) 32, 242, 677, 937
SspI AATATT 1 cut(s) 480
SspMI CTAG 6 cut(s) 662, 789, 803, 843, 921, 1217
StyD4I CCNGG 2 cut(s) 571, 726
TaaI ACNGT 2 cut(s) 118, 982
TaiI ACGT 2 cut(s) 307, 1053
TaqI TCGA 2 cut(s) 12, 96
TasI AATT 6 cut(s) 132, 163, 183, 1042, 1179, 1226
TauI GCSGC 1 cut(s) 680
Tru1I TTAA 7 cut(s) 126, 186, 195, 362, 450, 960, 1182
Tru9I TTAA 7 cut(s) 126, 186, 195, 362, 450, 960, 1182
TscAI CASTG 2 cut(s) 710, 789
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 4 cut(s) 445, 590, 593, 1091
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 4 cut(s) 265, 425, 762, 1131
TspGWI ACGGA 2 cut(s) 299, 841
TspRI CASTG 2 cut(s) 710, 789
Van91I CCANNNNNTGG 1 cut(s) 971
VpaK11BI GGWCC 3 cut(s) 286, 569, 974
VspI ATTAAT 1 cut(s) 1182
XapI RAATTY 4 cut(s) 132, 163, 1042, 1226
XceI RCATGY 1 cut(s) 1091
XmiI GTMKAC 2 cut(s) 84, 720
XspI CTAG 6 cut(s) 662, 789, 803, 843, 921, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.