Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008564

Physical Location & Seq

Genomic Coordinates Forward (+)

1629484 .. 1633948

Gene Structure 4465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1027700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCAGTGGCTCGGTTGGGCCGCCAAGCAAAACGGCCAGGTGGGTTCTGCATAAAAATGACGGCGGTGGCAATCTTGGGCCTCTGCTTTATATTCGTCTGGTCGATGTTTTCTTTTTCTTCCTCCTCCGTCACCACCCGAATCGAAAGCTTCGACAACATTGGGAAGTCGCCTGGATCAAAGAGCACCAGAGCGAGCACTCCCAGTGGGACCCACCAAGTTGCTAGTAATGGTGGGGAGGAGAAAAGGGCAAATGACTCTGCTGTGAGTTCACCTGCCCGTGAGCATAAATACGAGAAGGAGAAGAAAGAAGCGGTAAATGGGAAGAAGGGGAAGGGTAAGAAAAAGTTACCAGAGAGTGTGGCAAAGGGTAAAAATGTGACCTTGGAATCCGAGAATGAAGATTCGGAGATTGAAAAGGAAGATGGGGATGAAGAAAAGGAGGTGGTGGATGGAAAGGAAGAAGCTTTGGGTGATGAGAGTGAAGGAAATGGGGAAGCAGGGGGAGAGGGGGATAATTTGATGGAGACGATGGATAAGGAATCGGAGGAGGTGAAGCTGGAAGATGACGGTGGTGAATCCGAAAAAAGAGGGAAGAAGTATAAGATGAAGGGTCCATTGTTTGATCCAAAAGCACATTATAGTTGGAAACAATGTAGCACAAGGAGCAAGCATAATTACATTCCTTGTATTGATACGGAAGTTGGATCTGGAAGGCTGCAGTATAGGCATACGGAGAGGAGTTGCCCGAAAGTGGAACCTATGTGTCTTGTACCTCTTCCCCACGATGGATACGGCCCTCCAGTCCCCTGGCCTGAGAGCAAGGAGAAGATATTGTACAAGAATGTGGAGCATCCGAAACTGGCGGCATTCATCAAGGAACATAGTTGGGTGATGAAGTCTGGAGAATATCTGACTTTCCCTCAGAACCAGTCTGAATTGAAGGGTGGGATTCTTCACTATCTTGAGTCCATTGAAGAGATGGTACCAGACATCGAATGGGGTAAGAATATCCGTGTAGTGCTGGATATTGGATGTACAGATTCCGCCTTTGGGGCTTCTCTTGTTGATAAGGATGTATTAACATTGGCATTGGGCTTGAAAGATGACCTAGTTGACCTAGCTCAAGTTGCCCTCGAACGTGGTTTTCCTGCTTTAGTTAGCCATTTTCAAAATAGAAGGCTGCCTTTCCCCAGTGGTGGTTTTGATGCTGTTCACTGTGGCGGTTGCACCATTCCTTGGCATTCAAATGGGGGTAAGCATCTTCTAGAGATGAATAGGATTTTAAGGCCAGGCGGATACTTTGTCTTGTCAACTAAACATGACAGCTTTGAAGAAGAAGAAGCCATGGCTAAATTGACCGCATCTATCTGTTGGAATATTCTGGCTCATAAAACTGAAGAAGTCAGTGACGTGGGTGTCAAAATATACCAGAAGCCAGACTCAAATGATATATATGATCTGAGGAGGAAGAAATATCCACCTTTGTGCAAGGAAAATGAAAACCCTGATGCAGCCTGGTACGTTCCCGTGAAGACTTGCTTGCACCCCATTCCATCTGCCATTGAACAGCGTGGCACAGAGTGGCCAGAGGAATGGCCCAAAAGGCTCGAAAGGTATCCTGACTGGTTAAGTGATAAAGATAAATTGGATGCAGACACCAAGCACTGGAAAGCTATTGTTGATAAATCTTATCTCACTGGACTGGGTATCGACTGGTCAAAAATTCGAAATGTAATGGACATGAAAGCCATCTATGGAGGATTTGCTGCAGCCCTCGCACAACAAAAGGTTTGGGTGATGAATGTGGTACCTGTCCATGCACCCGATACACTTCCTTTCATATTTGAACGCGGGCTTGTTGGAACCTACCACGACTGGTGCGAGTCTTTCGGTACTTATCCCAGATCATATGACCTTTTGCATTTGGATCATCTGTTTTCGCGGCTTAAGAATAGGTGTAAGCAGCCTGTATCAATTGTTGTTGAGATGGATCGCTTGTTACGGCCTGGAGGTTGGGCGATTATACGTGAGAAAGTTGAGGTACTGGAACCCCTGGAGGGTATATTGAAGAGTATGCATTGGGAGATCCGGATGACTTATGCTCAGGGAAAGGAGGGTATCTTATGCGCCCAGAAAACGTTGTGGCTGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF21 Methyltransf_29

Protein Analysis

719

Amino Acids

80.74

Weight (kDa)

6.11

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	226 - 713	8.5e-185	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	342 - 437	3.4e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19430 AT1G19430 AT1G19430
fragaria_vesca	FvH4_2g39800 FvH4_2g39800
malus_domestica	MD08G1031800.v1.1 MD15G1027700.v1.1
prunus_persica	Prupe.1G379400_v2.0.a1
pyrus_communis	pycom08g02510 pycom15g02360
rosa_chinensis	RchiOBHm_Chr6g0301041
rosa_laevigata	RLG00000011282
rosa_multiflora	Rmu_sc0003168.1_g000010 Rmu_sc0035551.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167230
rosa_rugosa	Rorug06G0300200 Rorug06G0300300 Rorug06G0300400 Rorug06G0300500
rosa_samantha	Rh6AG414100 Rh6BG421100 Rh6CG428700 Rh6DG414100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	283
AasI	GACNNNNNNGTC	1 cut(s)	1418
Acc36I	ACCTGC	1 cut(s)	283
Acc65I	GGTACC	2 cut(s)	985, 1810
AccB1I	GGYRCC	2 cut(s)	985, 1810
AccB7I	CCANNNNNTGG	2 cut(s)	1239, 1668
AccII	CGCG	2 cut(s)	1854, 1945
AccIII	TCCGGA	1 cut(s)	2091
AclI	AACGTT	1 cut(s)	2141
AclWI	GGATC	6 cut(s)	184, 620, 715, 1938, 2001, 2083
AcoI	YGGCCR	2 cut(s)	35, 1586
AcsI	RAATTY	1 cut(s)	1725
AcuI	CTGAAG	1 cut(s)	1419
AdeI	CACNNNGTG	1 cut(s)	1584
AfaI	GTAC	8 cut(s)	774, 839, 987, 1039, 1523, 1812, 1897, 2046
AfiI	CCNNNNNNNGG	7 cut(s)	754, 788, 1053, 1199, 1239, 1668, 2060
AflII	CTTAAG	1 cut(s)	1949
AjiI	CACGTC	1 cut(s)	1414
AjnI	CCWGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
AleI	CACNNNNGTG	1 cut(s)	1486
AluBI	AGCT	6 cut(s)	150, 467, 559, 1124, 1329, 1676
AluI	AGCT	6 cut(s)	150, 467, 559, 1124, 1329, 1676
Alw21I	GWGCWC	2 cut(s)	188, 200
Alw26I	GTCTC	1 cut(s)	521
AlwI	GGATC	6 cut(s)	184, 620, 715, 1938, 2001, 2083
Aor13HI	TCCGGA	1 cut(s)	2091
AoxI	GGCC	9 cut(s)	19, 35, 79, 796, 812, 1289, 1586, 1598, 2006
ApeKI	GCWGC	7 cut(s)	718, 1183, 1514, 1769, 1772, 1966, 2149
ApoI	RAATTY	1 cut(s)	1725
Asp718I	GGTACC	2 cut(s)	985, 1810
AspLEI	GCGC	1 cut(s)	2132
AspS9I	GGNCC	6 cut(s)	19, 79, 210, 614, 797, 1599
AsuHPI	GGTGA	7 cut(s)	124, 264, 485, 565, 587, 904, 1810
AsuII	TTCGAA	1 cut(s)	1729
AvaII	GGWCC	2 cut(s)	210, 614
BaeI	ACNNNNGTAYC	2 cut(s)	687, 720
BalI	TGGCCA	1 cut(s)	1588
BanI	GGYRCC	2 cut(s)	985, 1810
BarI	GAAGNNNNNNTAC	4 cut(s)	821, 853, 969, 1001
BbsI	GAAGAC	1 cut(s)	1541
Bbv12I	GWGCWC	2 cut(s)	188, 200
BbvI	GCAGC	7 cut(s)	705, 1170, 1526, 1756, 1784, 1978, 2136
BccI	CCATC	9 cut(s)	419, 446, 517, 526, 782, 976, 1564, 1760, 1984
BceAI	ACGGC	4 cut(s)	50, 78, 811, 2021
BciT130I	CCWGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
BciVI	GTATCC	3 cut(s)	785, 1292, 1629
BcoDI	GTCTC	1 cut(s)	521
BfaI	CTAG	4 cut(s)	225, 1112, 1121, 1268
BfmI	CTRYAG	2 cut(s)	719, 1770
BfrI	CTTAAG	1 cut(s)	1949
BfuAI	ACCTGC	1 cut(s)	283
BfuI	GTATCC	3 cut(s)	785, 1292, 1629
BglI	GCCNNNNNGGC	2 cut(s)	1055, 1606
Bme1390I	CCNGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
Bme18I	GGWCC	2 cut(s)	210, 614
BmgBI	CACGTC	1 cut(s)	1414
BmgT120I	GGNCC	6 cut(s)	19, 79, 210, 614, 797, 1599
BmiI	GGNNCC	8 cut(s)	211, 212, 615, 759, 987, 1812, 1867, 2052
BmrFI	CCNGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
BmrI	ACTGGG	3 cut(s)	198, 1188, 1715
BmsI	GCATC	6 cut(s)	862, 1198, 1270, 1373, 1501, 1642
BmuI	ACTGGG	3 cut(s)	198, 1188, 1715
BpiI	GAAGAC	1 cut(s)	1541
BpmI	CTGGAG	4 cut(s)	786, 924, 2031, 2078
Bpu10I	CCTNAGC	1 cut(s)	2106
Bpu14I	TTCGAA	1 cut(s)	1729
BpuEI	CTTGAG	2 cut(s)	986, 1110
BsaAI	YACGTR	1 cut(s)	2030
BsaJI	CCNNGG	5 cut(s)	384, 809, 1238, 1347, 2055
BsaWI	WCCGGW	1 cut(s)	2091
Bsc4I	CCNNNNNNNGG	7 cut(s)	754, 788, 1053, 1199, 1239, 1668, 2060
BseAI	TCCGGA	1 cut(s)	2091
BseBI	CCWGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
BseDI	CCNNGG	5 cut(s)	384, 809, 1238, 1347, 2055
BseGI	GGATG	7 cut(s)	436, 457, 853, 1040, 1081, 1657, 2100
BseLI	CCNNNNNNNGG	7 cut(s)	754, 788, 1053, 1199, 1239, 1668, 2060
BseMII	CTCAG	4 cut(s)	807, 938, 1454, 2120
BseRI	GAGGAG	5 cut(s)	115, 254, 563, 754, 1480
BseXI	GCAGC	7 cut(s)	705, 1170, 1526, 1756, 1784, 1978, 2136
Bsh1236I	CGCG	2 cut(s)	1854, 1945
BshFI	GGCC	9 cut(s)	21, 37, 81, 798, 814, 1291, 1588, 1600, 2008
BshNI	GGYRCC	2 cut(s)	985, 1810
BsiHKAI	GWGCWC	2 cut(s)	188, 200
BsiSI	CCGG	1 cut(s)	2092
BslFI	GGGAC	2 cut(s)	223, 791
BslI	CCNNNNNNNGG	7 cut(s)	754, 788, 1053, 1199, 1239, 1668, 2060
BsmAI	GTCTC	1 cut(s)	521
BsmBI	CGTCTC	1 cut(s)	521
BsmFI	GGGAC	2 cut(s)	223, 791
BsmI	GAATGC	2 cut(s)	869, 1243
BsnI	GGCC	9 cut(s)	21, 37, 81, 798, 814, 1291, 1588, 1600, 2008
Bsp119I	TTCGAA	1 cut(s)	1729
Bsp1286I	GDGCHC	2 cut(s)	188, 200
Bsp13I	TCCGGA	1 cut(s)	2091
Bsp1407I	TGTACA	2 cut(s)	837, 1037
Bsp143I	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
Bsp19I	CCATGG	1 cut(s)	1347
BspANI	GGCC	9 cut(s)	21, 37, 81, 798, 814, 1291, 1588, 1600, 2008
BspCNI	CTCAG	4 cut(s)	808, 937, 1455, 2119
BspEI	TCCGGA	1 cut(s)	2091
BspFNI	CGCG	2 cut(s)	1854, 1945
BspLI	GGNNCC	8 cut(s)	211, 212, 615, 759, 987, 1812, 1867, 2052
BspMAI	CTGCAG	2 cut(s)	723, 1774
BspMI	ACCTGC	1 cut(s)	283
BspPI	GGATC	6 cut(s)	184, 620, 715, 1938, 2001, 2083
BspT104I	TTCGAA	1 cut(s)	1729
BspT107I	GGYRCC	2 cut(s)	985, 1810
BspTI	CTTAAG	1 cut(s)	1949
BsrGI	TGTACA	2 cut(s)	837, 1037
BssECI	CCNNGG	5 cut(s)	384, 809, 1238, 1347, 2055
BssMI	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
BssT1I	CCWWGG	3 cut(s)	384, 1238, 1347
Bst2UI	CCWGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
Bst4CI	ACNGT	2 cut(s)	572, 1220
Bst6I	CTCTTC	3 cut(s)	783, 972, 2066
BstAFI	CTTAAG	1 cut(s)	1949
BstAUI	TGTACA	2 cut(s)	837, 1037
BstBAI	YACGTR	1 cut(s)	2030
BstBI	TTCGAA	1 cut(s)	1729
BstC8I	GCNNGC	4 cut(s)	196, 671, 1544, 1856
BstDEI	CTNAG	4 cut(s)	816, 924, 1463, 2106
BstDSI	CCRYGG	1 cut(s)	1347
BstF5I	GGATG	7 cut(s)	436, 457, 853, 1040, 1081, 1657, 2100
BstFNI	CGCG	2 cut(s)	1854, 1945
BstHHI	GCGC	1 cut(s)	2132
BstKTI	GATC	8 cut(s)	179, 628, 710, 1462, 1910, 1933, 1996, 2091
BstMAI	GTCTC	1 cut(s)	521
BstMBI	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
BstMWI	GCNNNNNNNGC	6 cut(s)	666, 727, 1055, 1130, 1606, 1778
BstNI	CCWGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
BstSCI	CCNGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
BstSFI	CTRYAG	2 cut(s)	719, 1770
BstUI	CGCG	2 cut(s)	1854, 1945
BstV1I	GCAGC	7 cut(s)	705, 1170, 1526, 1756, 1784, 1978, 2136
BstV2I	GAAGAC	1 cut(s)	1541
BstX2I	RGATCY	2 cut(s)	707, 2088
BstXI	CCANNNNNNTGG	2 cut(s)	810, 1596
BstYI	RGATCY	2 cut(s)	707, 2088
BsuI	GTATCC	3 cut(s)	785, 1292, 1629
BsuRI	GGCC	9 cut(s)	21, 37, 81, 798, 814, 1291, 1588, 1600, 2008
BtgI	CCRYGG	1 cut(s)	1347
BtrI	CACGTC	1 cut(s)	1414
BtsCI	GGATG	7 cut(s)	436, 457, 853, 1040, 1081, 1657, 2100
BtsI	GCAGTG	1 cut(s)	12
BtsIMutI	CAGTG	7 cut(s)	12, 211, 1201, 1216, 1414, 1666, 1698
BveI	ACCTGC	1 cut(s)	283
Cac8I	GCNNGC	4 cut(s)	196, 671, 1544, 1856
CfoI	GCGC	1 cut(s)	2132
Cfr13I	GGNCC	6 cut(s)	19, 79, 210, 614, 797, 1599
Csp6I	GTAC	8 cut(s)	773, 838, 986, 1038, 1522, 1811, 1896, 2045
CviAII	CATG	4 cut(s)	1322, 1348, 1744, 1820
CviQI	GTAC	8 cut(s)	773, 838, 986, 1038, 1522, 1811, 1896, 2045
DdeI	CTNAG	4 cut(s)	816, 924, 1463, 2106
DpnI	GATC	8 cut(s)	178, 627, 709, 1461, 1909, 1932, 1995, 2090
DpnII	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
DraIII	CACNNNGTG	1 cut(s)	1584
DrdI	GACNNNNNNGTC	1 cut(s)	1418
DseDI	GACNNNNNNGTC	1 cut(s)	1418
EaeI	YGGCCR	2 cut(s)	35, 1586
Eam1104I	CTCTTC	3 cut(s)	783, 972, 2066
EarI	CTCTTC	3 cut(s)	783, 972, 2066
EciI	GGCGGA	2 cut(s)	1036, 1311
Eco130I	CCWWGG	3 cut(s)	384, 1238, 1347
Eco47I	GGWCC	2 cut(s)	210, 614
Eco57I	CTGAAG	1 cut(s)	1419
EcoO109I	RGGNCCY	1 cut(s)	210
EcoRII	CCWGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
EcoT14I	CCWWGG	3 cut(s)	384, 1238, 1347
EcoT22I	ATGCAT	1 cut(s)	2082
ErhI	CCWWGG	3 cut(s)	384, 1238, 1347
Esp3I	CGTCTC	1 cut(s)	521
FaeI	CATG	4 cut(s)	1325, 1351, 1747, 1823
FalI	AAGNNNNNCTT	4 cut(s)	1171, 1203, 1526, 1558
FaqI	GGGAC	2 cut(s)	223, 791
FatI	CATG	4 cut(s)	1321, 1347, 1743, 1819
FauI	CCCGC	1 cut(s)	1847
FauNDI	CATATG	1 cut(s)	1912
FokI	GGATG	7 cut(s)	443, 464, 840, 1047, 1088, 1664, 2107
FspBI	CTAG	4 cut(s)	225, 1112, 1121, 1268
GlaI	GCGC	1 cut(s)	2131
GsuI	CTGGAG	4 cut(s)	786, 924, 2031, 2078
HaeIII	GGCC	9 cut(s)	21, 37, 81, 798, 814, 1291, 1588, 1600, 2008
HapII	CCGG	1 cut(s)	2092
HhaI	GCGC	1 cut(s)	2132
Hin1II	CATG	4 cut(s)	1325, 1351, 1747, 1823
Hin6I	GCGC	1 cut(s)	2130
HinP1I	GCGC	1 cut(s)	2130
HincII	GTYRAC	2 cut(s)	1117, 1314
HindII	GTYRAC	2 cut(s)	1117, 1314
HindIII	AAGCTT	2 cut(s)	148, 465
HpaII	CCGG	1 cut(s)	2092
HphI	GGTGA	7 cut(s)	124, 264, 485, 565, 587, 904, 1810
Hpy166II	GTNNAC	4 cut(s)	272, 1117, 1216, 1314
Hpy188I	TCNGA	9 cut(s)	394, 409, 547, 583, 858, 915, 927, 937, 1464
Hpy188III	TCNNGA	6 cut(s)	711, 903, 965, 1268, 1622, 2092
Hpy8I	GTNNAC	4 cut(s)	272, 1117, 1216, 1314
HpyAV	CCTTC	8 cut(s)	292, 322, 328, 479, 604, 708, 937, 1173
HpyCH4III	ACNGT	2 cut(s)	572, 1220
HpyCH4IV	ACGT	5 cut(s)	1141, 1413, 1524, 2029, 2141
HpyF10VI	GCNNNNNNNGC	6 cut(s)	666, 727, 1055, 1130, 1606, 1778
HpyF3I	CTNAG	4 cut(s)	816, 924, 1463, 2106
HpySE526I	ACGT	5 cut(s)	1141, 1413, 1524, 2029, 2141
Hsp92II	CATG	4 cut(s)	1325, 1351, 1747, 1823
HspAI	GCGC	1 cut(s)	2130
KflI	GGGWCCC	1 cut(s)	210
Kpn2I	TCCGGA	1 cut(s)	2091
KpnI	GGTACC	2 cut(s)	989, 1814
Kzo9I	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
LmnI	GCTCC	2 cut(s)	666, 850
Lsp1109I	GCAGC	7 cut(s)	705, 1170, 1526, 1756, 1784, 1978, 2136
LweI	GCATC	6 cut(s)	862, 1198, 1270, 1373, 1501, 1642
MaeI	CTAG	4 cut(s)	225, 1112, 1121, 1268
MaeII	ACGT	5 cut(s)	1141, 1413, 1524, 2029, 2141
MaeIII	GTNAC	5 cut(s)	130, 348, 379, 1409, 2001
MalI	GATC	8 cut(s)	178, 627, 709, 1461, 1909, 1932, 1995, 2090
MboI	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
MfeI	CAATTG	1 cut(s)	1977
MflI	RGATCY	2 cut(s)	707, 2088
MhlI	GDGCHC	2 cut(s)	188, 200
MlsI	TGGCCA	1 cut(s)	1588
MluCI	AATT	7 cut(s)	517, 676, 938, 1355, 1646, 1725, 1977
MluNI	TGGCCA	1 cut(s)	1588
MlyI	GAGTC	4 cut(s)	251, 977, 1436, 1895
MmeI	TCCRAC	4 cut(s)	626, 685, 1355, 1843
Mox20I	TGGCCA	1 cut(s)	1588
Mph1103I	ATGCAT	1 cut(s)	2082
MroI	TCCGGA	1 cut(s)	2091
MscI	TGGCCA	1 cut(s)	1588
MseI	TTAA	5 cut(s)	1082, 1286, 1631, 1950, 2155
MslI	CAYNNNNRTG	3 cut(s)	56, 1248, 1486
Msp20I	TGGCCA	1 cut(s)	1588
MspCI	CTTAAG	1 cut(s)	1949
MspI	CCGG	1 cut(s)	2092
MspR9I	CCNGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
MunI	CAATTG	1 cut(s)	1977
Mva1269I	GAATGC	2 cut(s)	869, 1243
MvaI	CCWGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
MvnI	CGCG	2 cut(s)	1854, 1945
MwoI	GCNNNNNNNGC	6 cut(s)	666, 727, 1055, 1130, 1606, 1778
NcoI	CCATGG	1 cut(s)	1347
NdeI	CATATG	1 cut(s)	1912
NdeII	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
NlaIII	CATG	4 cut(s)	1325, 1351, 1747, 1823
NlaIV	GGNNCC	8 cut(s)	211, 212, 615, 759, 987, 1812, 1867, 2052
NmuCI	GTSAC	3 cut(s)	130, 379, 1409
NsiI	ATGCAT	1 cut(s)	2082
NspV	TTCGAA	1 cut(s)	1729
OliI	CACNNNNGTG	1 cut(s)	1486
PaqCI	CACCTGC	1 cut(s)	283
PcsI	WCGNNNNNNNCGW	2 cut(s)	150, 1881
PctI	GAATGC	2 cut(s)	869, 1243
PfeI	GAWTC	7 cut(s)	141, 389, 404, 542, 578, 952, 1043
PflMI	CCANNNNNTGG	2 cut(s)	1239, 1668
PleI	GAGTC	4 cut(s)	251, 976, 1436, 1894
PpsI	GAGTC	4 cut(s)	251, 976, 1436, 1894
Ppu21I	YACGTR	1 cut(s)	2030
PpuMI	RGGWCCY	1 cut(s)	210
Psp1406I	AACGTT	1 cut(s)	2141
Psp5II	RGGWCCY	1 cut(s)	210
Psp6I	CCWGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
PspGI	CCWGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
PspN4I	GGNNCC	8 cut(s)	211, 212, 615, 759, 987, 1812, 1867, 2052
PspPI	GGNCC	6 cut(s)	19, 79, 210, 614, 797, 1599
PspPPI	RGGWCCY	1 cut(s)	210
PstI	CTGCAG	2 cut(s)	723, 1774
PsuI	RGATCY	2 cut(s)	707, 2088
RsaI	GTAC	8 cut(s)	774, 839, 987, 1039, 1523, 1812, 1897, 2046
RsaNI	GTAC	8 cut(s)	773, 838, 986, 1038, 1522, 1811, 1896, 2045
RseI	CAYNNNNRTG	3 cut(s)	56, 1248, 1486
SaqAI	TTAA	5 cut(s)	1082, 1286, 1631, 1950, 2155
Sau3AI	GATC	8 cut(s)	176, 625, 707, 1459, 1907, 1930, 1993, 2088
Sau96I	GGNCC	6 cut(s)	19, 79, 210, 614, 797, 1599
SchI	GAGTC	4 cut(s)	251, 977, 1436, 1895
ScrFI	CCNGG	7 cut(s)	39, 174, 811, 1293, 1519, 2010, 2057
SduI	GDGCHC	2 cut(s)	188, 200
SfaNI	GCATC	6 cut(s)	862, 1198, 1270, 1373, 1501, 1642
SfcI	CTRYAG	2 cut(s)	719, 1770
SfuI	TTCGAA	1 cut(s)	1729
SinI	GGWCC	2 cut(s)	210, 614
SmiMI	CAYNNNNRTG	3 cut(s)	56, 1248, 1486
SmlI	CTYRAG	3 cut(s)	965, 1125, 1949
SmoI	CTYRAG	3 cut(s)	965, 1125, 1949
Sse9I	AATT	7 cut(s)	517, 676, 938, 1355, 1646, 1725, 1977
SspI	AATATT	1 cut(s)	1381
SspMI	CTAG	4 cut(s)	225, 1112, 1121, 1268
StyD4I	CCNGG	7 cut(s)	37, 172, 809, 1291, 1517, 2008, 2055
StyI	CCWWGG	3 cut(s)	384, 1238, 1347
TaaI	ACNGT	2 cut(s)	572, 1220
TaiI	ACGT	5 cut(s)	1144, 1416, 1527, 2032, 2144
TaqI	TCGA	8 cut(s)	104, 144, 153, 996, 1137, 1611, 1713, 1729
TasI	AATT	7 cut(s)	517, 676, 938, 1355, 1646, 1725, 1977
TatI	WGTACW	2 cut(s)	837, 1037
TauI	GCSGC	3 cut(s)	24, 869, 1948
TfiI	GAWTC	7 cut(s)	141, 389, 404, 542, 578, 952, 1043
Tru1I	TTAA	5 cut(s)	1082, 1286, 1631, 1950, 2155
Tru9I	TTAA	5 cut(s)	1082, 1286, 1631, 1950, 2155
TscAI	CASTG	7 cut(s)	12, 211, 1201, 1223, 1414, 1673, 1705
TseFI	GTSAC	3 cut(s)	130, 379, 1409
TseI	GCWGC	7 cut(s)	718, 1183, 1514, 1769, 1772, 1966, 2149
Tsp45I	GTSAC	3 cut(s)	130, 379, 1409
TspGWI	ACGGA	4 cut(s)	118, 713, 749, 1004
TspRI	CASTG	7 cut(s)	12, 211, 1201, 1223, 1414, 1673, 1705
Van91I	CCANNNNNTGG	2 cut(s)	1239, 1668
Vha464I	CTTAAG	1 cut(s)	1949
VpaK11BI	GGWCC	2 cut(s)	210, 614
XapI	RAATTY	1 cut(s)	1725
XbaI	TCTAGA	1 cut(s)	1267
XcmI	CCANNNNNNNNNTGG	2 cut(s)	979, 996
XspI	CTAG	4 cut(s)	225, 1112, 1121, 1268
Zsp2I	ATGCAT	1 cut(s)	2082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.