Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008564

Physical Location & Seq

Genomic Coordinates Reverse (-)

61609435 .. 61613880

Gene Structure 4446 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ27035

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGCGGTAGCTGCAGCTCGGTTTGGTCGCCAAGCGAAACGCCCGTATTGGGGTTTCTGTATAAAGATGACAGCGGTGGCCGTTATGGGTCTCTGCTTTATATTTGTGTGGACTATGTTTACGTCTCCTTCGAATTCAGTGAGTACAAGAATAGAGAGCTTTGACAATATAGAGCAGCCTCCTGGATCAAGGAGCAAAAGGGTGAGCAGTTCTGGGGCACAATCTGAGAGGAAGGTAGAGGACGAGAAGAAGGTAAATGGGTCTGTTGCTTTGGGTGGTCATGAGGTTAAATCTGAGGAGAGGGAGAAGAAGGAAGTGGCGAATACGAAAAAGGAGAGAGTTAAGAAGAAGTTACCAGAGAAGGTGTCGAAAGAGAAACAATTGAGTAAGGAAGATGGAGATGGAGATGAAGATGAAGAGCCAGAAGTGGTGGATGGAAAGGAAGAAGGTTTGGATGGTGAAGATGAAGGTGAAGGTGAAGGTGAAGGAAATGGGAATGCAGAAGGAGAGGGTGATTTGATTGAAGGGGTGGATCAGCAATTTGAGGACAAGTTGGAAGATGATGGCGGTGAATCGGAGAAGAGGGGAAACAAGAGAAATAAGATTAAGGGTCCGGTGTTTGATCCGAAAGCACATTATCATTGGAAATCATGTAGCACAAGGAGCAAGCATAATTACATTCCTTGTATTGATATAGAAGTTGGCTCTGGAAGGCTGCAGCAATATAGGCACACAGAGAGGAGTTGTCCACGATCACCGCCAATGTGTCTTGTGCCTCTTCCCCCAGATGGGTATGACCCTCCAGTCCATTGGTCCGAGAGTAAAGAGAAGATATTGTATAAGAATGTGGAGCATCCAAAGCTTGCTGCATTCGTCAAGGAACATACTTGGGTGATGGAGTCTGGAGAATACCTTACTTTTCCTCAAAACCAGTCTGAGATTAAGGGTGGGGTTCTTCACTATCTTGATTCCATTGAAGAGATGGTACCAGATCTCGAATGGGGAAAGAATATCCGTGTAGTGCTGGATATCGGATGTACAGATTCCGCTTTTGGGGCTTCTCTCCTTGATAAGGATGTATTAACATTATCGTTGGGGTTGAAAGATGACCTAGTTGACCTAGCTCAAGTTTCCCTCGAGCGTGGTTTTCCTACTGTAGTTAGCCCATTCGGAAACAGAAGGCTAGCTTTCCCTAGTGGTGTTTTTGATGTTATTCACTGCGGCGGGTGCACTGTACCTTGGCATTCAAATGGGGGTAAGCATCTTCTAGAGATGAATAGGATTTTAAGGCCCGGGGGATACTTTATCTTGTCAACTAAACATGACAGCTTTGAAGCTGAAGAAGCCGTGAATACATTGATGGTATCTATCTGCTGGAATATTTTGGCTCATAAAACTGATGAAGTCAGTGATGTGGGCGTCAAAATATATAAGAAGCCGGACTCAAATGATTTATATACGATGAGGAGGAAGAAACATTGGATACCTTTATGCAAGGGAAATGATAACCCAGATGCAGCCTGGTATGTCCCGGTGAAGACTTGTTTGCACACCATTCCATCTGGTATTGAAGAGCGTGGATCAGAGTGGCCGGAGGAATGGCCCAACAGGCTCGAAAGATATCCGGACTGGTTGAATGATAAAGATAAGTTGATTGCAGACACCAAGCATTGGAAAGATATTGTTGACAAATCCTATCTTATTGGACTTGGTATTGACTGGTCAAGCATTCGAAATGTAATGGACATGAAAGCCATCTATGGAGGATTTGCTGCAGCCCTCTTGCAACAAAAGGTTTGGGTGATGAATGTGGTCCCTGTCCATGCACCTGATACGCTTCCTTTCATTTTTGAGCGTGGGCTTGTTGGAACCTACCACGACTGGTGTGAGTCTTTCGGTACTTATCCAAGATCATATGATCTTTTGCATGCTGATCATCTGTTTTCACGGCTCAAGAACAGGTGTAAGCAGCCTGCATCAATTGTTGTTGAGATGGATCGTATTTTACGGCCAGGAGGTTGGGCCATCATACGTGACAAAGTTGAGATTCTAGATCCGTTGGAGGGAATACTCAAGAGTTTGCATTGGGATATAAGAATGACTTATGCTCAACAAAAAGAGGGTATTCTCTGTGCACAGAAAACTACATGGCGCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

719

Amino Acids

81.3

Weight (kDa)

5.79

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	225 - 714	7.6e-183	Putative S-adenosyl-L-methionine-dependent methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19430 AT1G19430 AT1G19430
fragaria_vesca	FvH4_2g39800 FvH4_2g39800
malus_domestica	MD08G1031800.v1.1 MD15G1027700.v1.1
prunus_persica	Prupe.1G379400_v2.0.a1
pyrus_communis	pycom08g02510 pycom15g02360
rosa_chinensis	RchiOBHm_Chr6g0301041
rosa_laevigata	RLG00000011282
rosa_multiflora	Rmu_sc0003168.1_g000010 Rmu_sc0035551.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167230
rosa_rugosa	Rorug06G0300200 Rorug06G0300300 Rorug06G0300400 Rorug06G0300500
rosa_samantha	Rh6AG414100 Rh6BG421100 Rh6CG428700 Rh6DG414100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	803
Acc65I	GGTACC	1 cut(s)	985
AccB1I	GGYRCC	2 cut(s)	985, 2151
AccB7I	CCANNNNNTGG	1 cut(s)	1671
AccIII	TCCGGA	1 cut(s)	1624
AciI	CCGC	7 cut(s)	5, 74, 567, 758, 1047, 1221, 1224
AclWI	GGATC	6 cut(s)	193, 540, 617, 1588, 2004, 2048
AcoI	YGGCCR	3 cut(s)	78, 1589, 2009
AcsI	RAATTY	1 cut(s)	133
AcuI	CTGAAG	1 cut(s)	1359
AcyI	GRCGYC	2 cut(s)	1419, 2152
AfaI	GTAC	5 cut(s)	145, 987, 1039, 1236, 1900
AfiI	CCNNNNNNNGG	8 cut(s)	49, 50, 788, 789, 1053, 1072, 1671, 2063
AgsI	TTSAA	7 cut(s)	524, 977, 1102, 1248, 1334, 1571, 1636
AjnI	CCWGG	3 cut(s)	181, 1520, 2011
AluBI	AGCT	8 cut(s)	11, 17, 159, 862, 1124, 1187, 1329, 1337
AluI	AGCT	8 cut(s)	11, 17, 159, 862, 1124, 1187, 1329, 1337
Alw21I	GWGCWC	2 cut(s)	1232, 2137
Alw26I	GTCTC	2 cut(s)	95, 129
Alw44I	GTGCAC	2 cut(s)	1228, 2133
AlwI	GGATC	6 cut(s)	193, 540, 617, 1588, 2004, 2048
Ama87I	CYCGRG	2 cut(s)	1136, 1292
Aor13HI	TCCGGA	1 cut(s)	1624
AoxI	GGCC	6 cut(s)	78, 1289, 1589, 1601, 2009, 2022
ApaLI	GTGCAC	2 cut(s)	1228, 2133
ApoI	RAATTY	1 cut(s)	133
Asp718I	GGTACC	1 cut(s)	985
AspLEI	GCGC	1 cut(s)	2154
AspS9I	GGNCC	6 cut(s)	611, 813, 1290, 1602, 1813, 2022
AsuC2I	CCSGG	3 cut(s)	1293, 1294, 1532
AsuII	TTCGAA	2 cut(s)	131, 1732
AsuNHI	GCTAGC	1 cut(s)	1183
AvaI	CYCGRG	2 cut(s)	1136, 1292
AvaII	GGWCC	3 cut(s)	611, 813, 1813
BaeGI	GKGCMC	3 cut(s)	220, 1232, 2137
BanI	GGYRCC	2 cut(s)	985, 2151
BarI	GAAGNNNNNNTAC	2 cut(s)	969, 1001
BbsI	GAAGAC	1 cut(s)	1544
Bbv12I	GWGCWC	2 cut(s)	1232, 2137
BbvI	GCAGC	9 cut(s)	26, 187, 702, 730, 853, 1529, 1759, 1787, 1981
BceAI	ACGGC	4 cut(s)	65, 1331, 1964, 2024
BciT130I	CCWGG	3 cut(s)	183, 1522, 2013
BciVI	GTATCC	2 cut(s)	1292, 1476
BclI	TGATCA	1 cut(s)	1933
BcnI	CCSGG	3 cut(s)	1293, 1294, 1532
BcoDI	GTCTC	2 cut(s)	95, 129
BfaI	CTAG	6 cut(s)	1112, 1121, 1184, 1194, 1268, 2051
BfmI	CTRYAG	4 cut(s)	12, 716, 1155, 1773
BfoI	RGCGCY	1 cut(s)	2155
BfuI	GTATCC	2 cut(s)	1292, 1476
BglI	GCCNNNNNGGC	1 cut(s)	1609
BglII	AGATCT	1 cut(s)	991
Bme1390I	CCNGG	6 cut(s)	183, 1293, 1294, 1522, 1532, 2013
Bme18I	GGWCC	3 cut(s)	611, 813, 1813
BmeT110I	CYCGRG	2 cut(s)	1136, 1292
BmgT120I	GGNCC	6 cut(s)	611, 813, 1290, 1602, 1813, 2022
BmiI	GGNNCC	5 cut(s)	612, 987, 1815, 1870, 2153
BmrFI	CCNGG	6 cut(s)	183, 1293, 1294, 1522, 1532, 2013
BmsI	GCATC	4 cut(s)	862, 1270, 1504, 1985
BmtI	GCTAGC	1 cut(s)	1187
BpiI	GAAGAC	1 cut(s)	1544
BpmI	CTGGAG	2 cut(s)	786, 924
Bpu14I	TTCGAA	2 cut(s)	131, 1732
BpuEI	CTTGAG	3 cut(s)	1110, 1937, 2057
BpuMI	CCSGG	3 cut(s)	1293, 1294, 1532
BsaAI	YACGTR	1 cut(s)	2033
BsaHI	GRCGYC	2 cut(s)	1419, 2152
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	3 cut(s)	1238, 1292, 1293
BsaWI	WCCGGW	2 cut(s)	613, 1624
Bsc4I	CCNNNNNNNGG	8 cut(s)	49, 50, 788, 789, 1053, 1072, 1671, 2063
Bse1I	ACTGG	5 cut(s)	803, 931, 1634, 1724, 1886
BseAI	TCCGGA	1 cut(s)	1624
BseBI	CCWGG	3 cut(s)	183, 1522, 2013
BseDI	CCNNGG	3 cut(s)	1238, 1292, 1293
BseGI	GGATG	5 cut(s)	439, 460, 853, 1040, 1081
BseLI	CCNNNNNNNGG	8 cut(s)	49, 50, 788, 789, 1053, 1072, 1671, 2063
BseMII	CTCAG	3 cut(s)	216, 285, 927
BseNI	ACTGG	5 cut(s)	803, 931, 1634, 1724, 1886
BseRI	GAGGAG	3 cut(s)	311, 754, 1480
BseSI	GKGCMC	3 cut(s)	220, 1232, 2137
BseXI	GCAGC	9 cut(s)	26, 187, 702, 730, 853, 1529, 1759, 1787, 1981
BshFI	GGCC	6 cut(s)	80, 1291, 1591, 1603, 2011, 2024
BshNI	GGYRCC	2 cut(s)	985, 2151
BsiHKAI	GWGCWC	2 cut(s)	1232, 2137
BsiHKCI	CYCGRG	2 cut(s)	1136, 1292
BsiSI	CCGG	6 cut(s)	614, 1293, 1439, 1532, 1592, 1625
BslFI	GGGAC	2 cut(s)	1514, 1799
BslI	CCNNNNNNNGG	8 cut(s)	49, 50, 788, 789, 1053, 1072, 1671, 2063
BsmAI	GTCTC	2 cut(s)	95, 129
BsmBI	CGTCTC	1 cut(s)	129
BsmFI	GGGAC	2 cut(s)	1514, 1799
BsmI	GAATGC	4 cut(s)	502, 869, 1243, 1728
BsnI	GGCC	6 cut(s)	80, 1291, 1591, 1603, 2011, 2024
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	2 cut(s)	1136, 1292
Bsp119I	TTCGAA	2 cut(s)	131, 1732
Bsp1286I	GDGCHC	3 cut(s)	220, 1232, 2137
Bsp13I	TCCGGA	1 cut(s)	1624
Bsp1407I	TGTACA	1 cut(s)	1037
BspACI	CCGC	7 cut(s)	5, 74, 567, 758, 1047, 1221, 1224
BspANI	GGCC	6 cut(s)	80, 1291, 1591, 1603, 2011, 2024
BspCNI	CTCAG	3 cut(s)	217, 286, 928
BspEI	TCCGGA	1 cut(s)	1624
BspHI	TCATGA	1 cut(s)	280
BspLI	GGNNCC	5 cut(s)	612, 987, 1815, 1870, 2153
BspMAI	CTGCAG	3 cut(s)	16, 720, 1777
BspOI	GCTAGC	1 cut(s)	1187
BspPI	GGATC	6 cut(s)	193, 540, 617, 1588, 2004, 2048
BspQI	GCTCTTC	2 cut(s)	411, 1566
BspT104I	TTCGAA	2 cut(s)	131, 1732
BspT107I	GGYRCC	2 cut(s)	985, 2151
BspTNI	GGTCTC	1 cut(s)	95
BsrGI	TGTACA	1 cut(s)	1037
BsrI	ACTGG	5 cut(s)	803, 931, 1634, 1724, 1886
BssECI	CCNNGG	3 cut(s)	1238, 1292, 1293
BssNI	GRCGYC	2 cut(s)	1419, 2152
BssT1I	CCWWGG	1 cut(s)	1238
Bst2UI	CCWGG	3 cut(s)	183, 1522, 2013
Bst4CI	ACNGT	2 cut(s)	1156, 1234
Bst6I	CTCTTC	5 cut(s)	411, 575, 783, 972, 1566
BstACI	GRCGYC	2 cut(s)	1419, 2152
BstAUI	TGTACA	1 cut(s)	1037
BstBAI	YACGTR	1 cut(s)	2033
BstBI	TTCGAA	2 cut(s)	131, 1732
BstC8I	GCNNGC	5 cut(s)	668, 864, 1185, 1929, 1974
BstDEI	CTNAG	3 cut(s)	225, 294, 936
BstENI	CCTNNNNNAGG	1 cut(s)	1070
BstF5I	GGATG	5 cut(s)	439, 460, 853, 1040, 1081
BstH2I	RGCGCY	1 cut(s)	2155
BstHHI	GCGC	1 cut(s)	2154
BstMAI	GTCTC	2 cut(s)	95, 129
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 663, 727, 859, 1055, 1227, 1343, 1609
BstNI	CCWGG	3 cut(s)	183, 1522, 2013
BstNSI	RCATGY	1 cut(s)	1931
BstSCI	CCNGG	6 cut(s)	181, 1291, 1292, 1520, 1530, 2011
BstSFI	CTRYAG	4 cut(s)	12, 716, 1155, 1773
BstSLI	GKGCMC	3 cut(s)	220, 1232, 2137
BstV1I	GCAGC	9 cut(s)	26, 187, 702, 730, 853, 1529, 1759, 1787, 1981
BstV2I	GAAGAC	1 cut(s)	1544
BstX2I	RGATCY	2 cut(s)	991, 2053
BstXI	CCANNNNNNTGG	2 cut(s)	810, 2019
BstYI	RGATCY	2 cut(s)	991, 2053
BsuI	GTATCC	2 cut(s)	1292, 1476
BsuRI	GGCC	6 cut(s)	80, 1291, 1591, 1603, 2011, 2024
BtsCI	GGATG	5 cut(s)	439, 460, 853, 1040, 1081
BtsI	GCAGTG	1 cut(s)	1216
BtsIMutI	CAGTG	4 cut(s)	144, 1216, 1230, 1414
Cac8I	GCNNGC	5 cut(s)	668, 864, 1185, 1929, 1974
CciI	TCATGA	1 cut(s)	280
CfoI	GCGC	1 cut(s)	2154
Cfr13I	GGNCC	6 cut(s)	611, 813, 1290, 1602, 1813, 2022
Cfr9I	CCCGGG	1 cut(s)	1292
CseI	GACGC	1 cut(s)	1408
Csp6I	GTAC	5 cut(s)	144, 986, 1038, 1235, 1899
CviAII	CATG	7 cut(s)	281, 651, 1322, 1747, 1823, 1928, 2148
CviQI	GTAC	5 cut(s)	144, 986, 1038, 1235, 1899
DdeI	CTNAG	3 cut(s)	225, 294, 936
DinI	GGCGCC	1 cut(s)	2153
DrdI	GACNNNNNNGTC	1 cut(s)	803
DseDI	GACNNNNNNGTC	1 cut(s)	803
EaeI	YGGCCR	3 cut(s)	78, 1589, 2009
Eam1104I	CTCTTC	5 cut(s)	411, 575, 783, 972, 1566
EarI	CTCTTC	5 cut(s)	411, 575, 783, 972, 1566
Eco130I	CCWWGG	1 cut(s)	1238
Eco31I	GGTCTC	1 cut(s)	95
Eco32I	GATATC	2 cut(s)	1030, 1622
Eco47I	GGWCC	3 cut(s)	611, 813, 1813
Eco57I	CTGAAG	1 cut(s)	1359
Eco88I	CYCGRG	2 cut(s)	1136, 1292
EcoNI	CCTNNNNNAGG	1 cut(s)	1070
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	3 cut(s)	181, 1520, 2011
EcoRV	GATATC	2 cut(s)	1030, 1622
EcoT14I	CCWWGG	1 cut(s)	1238
EgeI	GGCGCC	1 cut(s)	2153
EheI	GGCGCC	1 cut(s)	2153
ErhI	CCWWGG	1 cut(s)	1238
Esp3I	CGTCTC	1 cut(s)	129
FaeI	CATG	7 cut(s)	284, 654, 1325, 1750, 1826, 1931, 2151
FalI	AAGNNNNNCTT	4 cut(s)	1171, 1203, 2086, 2118
FaqI	GGGAC	2 cut(s)	1514, 1799
FatI	CATG	7 cut(s)	280, 650, 1321, 1746, 1822, 1927, 2147
FauI	CCCGC	1 cut(s)	1217
FauNDI	CATATG	1 cut(s)	1915
FbaI	TGATCA	1 cut(s)	1933
FokI	GGATG	5 cut(s)	446, 467, 840, 1047, 1088
FspBI	CTAG	6 cut(s)	1112, 1121, 1184, 1194, 1268, 2051
GlaI	GCGC	1 cut(s)	2153
GsuI	CTGGAG	2 cut(s)	786, 924
HaeII	RGCGCY	1 cut(s)	2155
HaeIII	GGCC	6 cut(s)	80, 1291, 1591, 1603, 2011, 2024
HapII	CCGG	6 cut(s)	614, 1293, 1439, 1532, 1592, 1625
HgaI	GACGC	1 cut(s)	1408
HhaI	GCGC	1 cut(s)	2154
Hin1I	GRCGYC	2 cut(s)	1419, 2152
Hin1II	CATG	7 cut(s)	284, 654, 1325, 1750, 1826, 1931, 2151
Hin6I	GCGC	1 cut(s)	2152
HinP1I	GCGC	1 cut(s)	2152
HincII	GTYRAC	3 cut(s)	1117, 1314, 1687
HindII	GTYRAC	3 cut(s)	1117, 1314, 1687
HindIII	AAGCTT	1 cut(s)	860
HinfI	GANTC	7 cut(s)	572, 899, 968, 1043, 1442, 1889, 2047
HpaII	CCGG	6 cut(s)	614, 1293, 1439, 1532, 1592, 1625
Hpy166II	GTNNAC	8 cut(s)	111, 120, 749, 1117, 1230, 1314, 1687, 2135
Hpy188I	TCNGA	9 cut(s)	226, 295, 577, 627, 817, 937, 1034, 1172, 1585
Hpy8I	GTNNAC	8 cut(s)	111, 120, 749, 1117, 1230, 1314, 1687, 2135
HpyCH4III	ACNGT	2 cut(s)	1156, 1234
HpyCH4IV	ACGT	2 cut(s)	122, 2032
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 663, 727, 859, 1055, 1227, 1343, 1609
HpyF3I	CTNAG	3 cut(s)	225, 294, 936
HpySE526I	ACGT	2 cut(s)	122, 2032
Hsp92I	GRCGYC	2 cut(s)	1419, 2152
Hsp92II	CATG	7 cut(s)	284, 654, 1325, 1750, 1826, 1931, 2151
HspAI	GCGC	1 cut(s)	2152
KasI	GGCGCC	1 cut(s)	2151
Kpn2I	TCCGGA	1 cut(s)	1624
KpnI	GGTACC	1 cut(s)	989
Ksp22I	TGATCA	1 cut(s)	1933
LguI	GCTCTTC	2 cut(s)	411, 1566
LmnI	GCTCC	3 cut(s)	192, 663, 850
Lsp1109I	GCAGC	9 cut(s)	26, 187, 702, 730, 853, 1529, 1759, 1787, 1981
LweI	GCATC	4 cut(s)	862, 1270, 1504, 1985
MaeI	CTAG	6 cut(s)	1112, 1121, 1184, 1194, 1268, 2051
MaeII	ACGT	2 cut(s)	122, 2032
MaeIII	GTNAC	2 cut(s)	351, 2033
MfeI	CAATTG	2 cut(s)	380, 1980
MflI	RGATCY	2 cut(s)	991, 2053
MhlI	GDGCHC	3 cut(s)	220, 1232, 2137
MluCI	AATT	5 cut(s)	133, 380, 539, 673, 1980
Mly113I	GGCGCC	1 cut(s)	2152
MlyI	GAGTC	3 cut(s)	908, 1436, 1898
MmeI	TCCRAC	3 cut(s)	534, 1846, 2040
MroI	TCCGGA	1 cut(s)	1624
MseI	TTAA	6 cut(s)	288, 342, 606, 942, 1082, 1286
MslI	CAYNNNNRTG	1 cut(s)	1248
MspA1I	CMGCKG	1 cut(s)	74
MspI	CCGG	6 cut(s)	614, 1293, 1439, 1532, 1592, 1625
MspR9I	CCNGG	6 cut(s)	183, 1293, 1294, 1522, 1532, 2013
MunI	CAATTG	2 cut(s)	380, 1980
Mva1269I	GAATGC	4 cut(s)	502, 869, 1243, 1728
MvaI	CCWGG	3 cut(s)	183, 1522, 2013
MwoI	GCNNNNNNNGC	8 cut(s)	11, 663, 727, 859, 1055, 1227, 1343, 1609
NarI	GGCGCC	1 cut(s)	2152
NciI	CCSGG	3 cut(s)	1293, 1294, 1532
NdeI	CATATG	1 cut(s)	1915
NheI	GCTAGC	1 cut(s)	1183
NlaIII	CATG	7 cut(s)	284, 654, 1325, 1750, 1826, 1931, 2151
NlaIV	GGNNCC	5 cut(s)	612, 987, 1815, 1870, 2153
NmuCI	GTSAC	1 cut(s)	2033
NspI	RCATGY	1 cut(s)	1931
NspV	TTCGAA	2 cut(s)	131, 1732
PaeI	GCATGC	1 cut(s)	1931
PaeR7I	CTCGAG	1 cut(s)	1136
PagI	TCATGA	1 cut(s)	280
PciSI	GCTCTTC	2 cut(s)	411, 1566
PcsI	WCGNNNNNNNCGW	1 cut(s)	128
PctI	GAATGC	4 cut(s)	502, 869, 1243, 1728
PfeI	GAWTC	4 cut(s)	572, 968, 1043, 2047
PflMI	CCANNNNNTGG	1 cut(s)	1671
PfoI	TCCNGGA	1 cut(s)	181
PleI	GAGTC	3 cut(s)	907, 1436, 1897
PluTI	GGCGCC	1 cut(s)	2155
PpsI	GAGTC	3 cut(s)	907, 1436, 1897
Ppu21I	YACGTR	1 cut(s)	2033
Psp6I	CCWGG	3 cut(s)	181, 1520, 2011
PspGI	CCWGG	3 cut(s)	181, 1520, 2011
PspN4I	GGNNCC	5 cut(s)	612, 987, 1815, 1870, 2153
PspPI	GGNCC	6 cut(s)	611, 813, 1290, 1602, 1813, 2022
PspXI	VCTCGAGB	1 cut(s)	1136
PstI	CTGCAG	3 cut(s)	16, 720, 1777
PsuI	RGATCY	2 cut(s)	991, 2053
RsaI	GTAC	5 cut(s)	145, 987, 1039, 1236, 1900
RsaNI	GTAC	5 cut(s)	144, 986, 1038, 1235, 1899
RseI	CAYNNNNRTG	1 cut(s)	1248
SapI	GCTCTTC	2 cut(s)	411, 1566
SaqAI	TTAA	6 cut(s)	288, 342, 606, 942, 1082, 1286
Sau96I	GGNCC	6 cut(s)	611, 813, 1290, 1602, 1813, 2022
SchI	GAGTC	3 cut(s)	908, 1436, 1898
ScrFI	CCNGG	6 cut(s)	183, 1293, 1294, 1522, 1532, 2013
SduI	GDGCHC	3 cut(s)	220, 1232, 2137
SfaNI	GCATC	4 cut(s)	862, 1270, 1504, 1985
SfcI	CTRYAG	4 cut(s)	12, 716, 1155, 1773
SfoI	GGCGCC	1 cut(s)	2153
Sfr274I	CTCGAG	1 cut(s)	1136
SfuI	TTCGAA	2 cut(s)	131, 1732
SinI	GGWCC	3 cut(s)	611, 813, 1813
SlaI	CTCGAG	1 cut(s)	1136
SmaI	CCCGGG	1 cut(s)	1294
SmiMI	CAYNNNNRTG	1 cut(s)	1248
SmlI	CTYRAG	4 cut(s)	1125, 1136, 1952, 2072
SmoI	CTYRAG	4 cut(s)	1125, 1136, 1952, 2072
SphI	GCATGC	1 cut(s)	1931
Sse9I	AATT	5 cut(s)	133, 380, 539, 673, 1980
SsiI	CCGC	7 cut(s)	5, 74, 567, 758, 1047, 1221, 1224
SspDI	GGCGCC	1 cut(s)	2151
SspI	AATATT	1 cut(s)	1381
SspMI	CTAG	6 cut(s)	1112, 1121, 1184, 1194, 1268, 2051
StyD4I	CCNGG	6 cut(s)	181, 1291, 1292, 1520, 1530, 2011
StyI	CCWWGG	1 cut(s)	1238
TaaI	ACNGT	2 cut(s)	1156, 1234
TaiI	ACGT	2 cut(s)	125, 2035
TaqI	TCGA	6 cut(s)	131, 368, 996, 1137, 1614, 1732
TasI	AATT	5 cut(s)	133, 380, 539, 673, 1980
TatI	WGTACW	2 cut(s)	143, 1037
TauI	GCSGC	1 cut(s)	1224
TfiI	GAWTC	4 cut(s)	572, 968, 1043, 2047
Tru1I	TTAA	6 cut(s)	288, 342, 606, 942, 1082, 1286
Tru9I	TTAA	6 cut(s)	288, 342, 606, 942, 1082, 1286
TscAI	CASTG	4 cut(s)	144, 1223, 1237, 1414
TseFI	GTSAC	1 cut(s)	2033
Tsp45I	GTSAC	1 cut(s)	2033
TspDTI	ATGAA	8 cut(s)	423, 429, 480, 1289, 1416, 1763, 1820, 1834
TspGWI	ACGGA	2 cut(s)	1004, 2046
TspMI	CCCGGG	1 cut(s)	1292
TspRI	CASTG	4 cut(s)	144, 1223, 1237, 1414
Van91I	CCANNNNNTGG	1 cut(s)	1671
VneI	GTGCAC	2 cut(s)	1228, 2133
VpaK11BI	GGWCC	3 cut(s)	611, 813, 1813
XagI	CCTNNNNNAGG	1 cut(s)	1070
XapI	RAATTY	1 cut(s)	133
XbaI	TCTAGA	2 cut(s)	1267, 2050
XceI	RCATGY	1 cut(s)	1931
XcmI	CCANNNNNNNNNTGG	3 cut(s)	979, 996, 1518
XhoI	CTCGAG	1 cut(s)	1136
XmaI	CCCGGG	1 cut(s)	1292
XspI	CTAG	6 cut(s)	1112, 1121, 1184, 1194, 1268, 2051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.