Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008564

Physical Location & Seq

Genomic Coordinates Forward (+)

8226764 .. 8230669

Gene Structure 3906 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011282

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGCGGTAGCTGCAGCTCGGTTTGGTCGCCAAGCGAAACGCCCGTATTGGGGTTTCTGTATAAAGATGACAGCGGTGGCCGTTATGGGTCTCTGCTTTATATTTGTGTGGACTATGTTTACGTCTCCTTCGAATTCAGTGAGTACAAGAATAGAGAGCTTTGACAATATAGAGCAGCCTCCTGGATCAAGGAGCAAAAGGGTGAGCAGTTCTGGGGCACAATCTGATGAGAGGAAGGTAGAGGATGAGAAGAAGGTAAATGGGTCTGTTGCTTTGGGTGGTCATGAGGTTAAGTCTGAGGAGAGGGAGAAGAAGGAAGTGGCGAATACGAAAAAGGAGAGAGTTAAGAAGAAGTTACCAGATAAGGTGTCGAAAGAGAAACAATTCAGTAAGGAAAAGGAGAAGGAAGATGGAGATGAAGATGAAGAGCCAGAAGTGGTGGATGGAAAGGAAGAAGGTTTGGATGGTGAAGATGAAGGTCAAGGTGAAGGTGAAGGTGAAGGAAATGGGAATGCAGAAGGAGAGGGTGATTTGATTGAAGGGGTGGATCAGGAATTTGAGGAGAAGTTGGAAGATGATGGCGGTGAATCGGAGAAGAGGGGAAAGAAGAGAAATAAGATTAAGGGTCCGGTGTTTGATCCGAAAGCACATTATCATTGGAAATCATGTAGCACAAGGAGCAAGCACAATTACATTCCTTGTATTGATATAGAAGTTGGCTCTGGAAGGCTGCAGCAATATAGGCACACAGAGAGGAGTTGTCCACGATCACCGCCAATGTGTCTTGTGCCTCTTCCCCCAGATGGGTATGACCCTCCAGTCCATTGGCCCGAGAGTAAAGAGAAGATATTGTATAAGAATGTGGAGCATCCAAAGCTTGCTGCATTCGTCAAGGAACATACTTGGGTGATGGAGTCTGGAGAATACCTTACTTTTCCTCAAAACCAGTCTGGGATTAAGGGTGGGGTTCTTCACTATCTTGAGTCCATTGAAGAGATGGTACCAGATCTTGAATGGGGAAAGAATATCCGTGTAGTGCTGGATATCGGATGTACAGATTCCGCTTTTGGGGCTTCTCTCCTTGATAAGGATGTATTAACATTATCATTGGGGTTGAAAGATGACCTAGTTGACCTAGCTCAAGTTTCCCTCGAGCGTGGTTTTCCTACTGTAGTTAGCCCATTTGGAAACAGAAGGCTAGCTTTCCCTAGTGGTGTTTTTGATGTTATTCACTGCGGCGGGTGCACTGTACCTTGGCATTCAAATGGGGGTAAGCATCTTCTAGAGATGAATAGGATTTTAAGGCCCGGGGGATACTTTATCTTGTCAACTAAACATGACAGCTTTGAAGCTGAAGAAGCCGTGAATACATTGATGGTATCTATCTGCTGGAATATTTTGGCTCATAAAACTGATGAAGTCAGTGATGTGGGTGTCAAAATATATAAGAAGCCGGACTCAAATGATTTATATACGATGAGGAGGAAGAAACATTGGATACCTTTATGCAAGGGAAATGATAACCCAGATGCAGCCTGGTATGTCCCGGTGGAGACTTGTTTGCACACCATTCCATCTGGTATTGAAGAGCGTGGATCAGAGTGGCCGGAGGAATGGCCCAACAGGCTCGAAAGATATCCGGACTGGTTGAACGATAAAGATAAGTTGATTGCAGACACCAAGCACTGGAAAGATATTGTTGACAAATCCTATCTTATTGGACTTGGTATTGACTGGTCAAGCATTCGAAATGTAATGGACATGAAAGCCATCTATGGAGGATTTGCTGCAGCCCTCTTGCAACAAAAGGTTTGGGTGATGAATGTGGTCCCTGTCCATGCACCTGATACGCTTCCTTTCATTTTTGAGCGTGGGCTTGTTGGAACCTACCACGACTGGTGTGAGTCTTTCGGTACTTATCCAAGATCATATGATCTTTTGCATGCTGATCATCTGTTTTCACGGCTCAAGAACAGGTGTAAGCAGCCAGCATCAATTGTTGTTGAGATGGATCGTATTTTACGGCCAGGAGGTTGGGCCATCATACGTGACAAAGTTGAGATTCTAGATCCGTTGGAGGGAATACTCAGGAGTTTGCATTGGGATATAAGAATGACTTATGCTCAACAAAAAGAGGGTATTCTCTGTGCACAGAAAACTACATGGCGCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

725

Amino Acids

81.97

Weight (kDa)

5.75

Isoelectric Point (pI)

47.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	230 - 719	2.9e-183	Putative S-adenosyl-L-methionine-dependent methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19430 AT1G19430 AT1G19430
fragaria_vesca	FvH4_2g39800 FvH4_2g39800
malus_domestica	MD08G1031800.v1.1 MD15G1027700.v1.1
prunus_persica	Prupe.1G379400_v2.0.a1
pyrus_communis	pycom08g02510 pycom15g02360
rosa_chinensis	RchiOBHm_Chr6g0301041
rosa_laevigata	RLG00000011282
rosa_multiflora	Rmu_sc0003168.1_g000010 Rmu_sc0035551.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167230
rosa_rugosa	Rorug06G0300200 Rorug06G0300300 Rorug06G0300400 Rorug06G0300500
rosa_samantha	Rh6AG414100 Rh6BG421100 Rh6CG428700 Rh6DG414100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	818
Acc65I	GGTACC	1 cut(s)	1000
AccB1I	GGYRCC	2 cut(s)	1000, 2166
AccB7I	CCANNNNNTGG	1 cut(s)	1686
AccIII	TCCGGA	1 cut(s)	1639
AciI	CCGC	7 cut(s)	5, 74, 582, 773, 1062, 1236, 1239
AclWI	GGATC	6 cut(s)	193, 555, 632, 1603, 2019, 2063
AcoI	YGGCCR	3 cut(s)	78, 1604, 2024
AcsI	RAATTY	2 cut(s)	133, 554
AcuI	CTGAAG	1 cut(s)	1374
AcyI	GRCGYC	1 cut(s)	2167
AfaI	GTAC	5 cut(s)	145, 1002, 1054, 1251, 1915
AfiI	CCNNNNNNNGG	8 cut(s)	49, 50, 803, 804, 1068, 1087, 1686, 2078
AgsI	TTSAA	8 cut(s)	539, 992, 1013, 1117, 1263, 1349, 1586, 1651
AjnI	CCWGG	3 cut(s)	181, 1535, 2026
AluBI	AGCT	8 cut(s)	11, 17, 159, 877, 1139, 1202, 1344, 1352
AluI	AGCT	8 cut(s)	11, 17, 159, 877, 1139, 1202, 1344, 1352
Alw21I	GWGCWC	2 cut(s)	1247, 2152
Alw26I	GTCTC	3 cut(s)	95, 129, 1547
Alw44I	GTGCAC	2 cut(s)	1243, 2148
AlwI	GGATC	6 cut(s)	193, 555, 632, 1603, 2019, 2063
Ama87I	CYCGRG	3 cut(s)	830, 1151, 1307
Aor13HI	TCCGGA	1 cut(s)	1639
AoxI	GGCC	7 cut(s)	78, 827, 1304, 1604, 1616, 2024, 2037
ApaLI	GTGCAC	2 cut(s)	1243, 2148
ApoI	RAATTY	2 cut(s)	133, 554
Asp700I	GAANNNNTTC	1 cut(s)	383
Asp718I	GGTACC	1 cut(s)	1000
AspLEI	GCGC	1 cut(s)	2169
AspS9I	GGNCC	6 cut(s)	626, 828, 1305, 1617, 1828, 2037
AsuC2I	CCSGG	3 cut(s)	1308, 1309, 1547
AsuII	TTCGAA	2 cut(s)	131, 1747
AsuNHI	GCTAGC	1 cut(s)	1198
AvaI	CYCGRG	3 cut(s)	830, 1151, 1307
AvaII	GGWCC	2 cut(s)	626, 1828
BaeGI	GKGCMC	3 cut(s)	220, 1247, 2152
BanI	GGYRCC	2 cut(s)	1000, 2166
BarI	GAAGNNNNNNTAC	2 cut(s)	984, 1016
Bbv12I	GWGCWC	2 cut(s)	1247, 2152
BbvI	GCAGC	9 cut(s)	26, 187, 717, 745, 868, 1544, 1774, 1802, 1996
BceAI	ACGGC	4 cut(s)	65, 1346, 1979, 2039
BciT130I	CCWGG	3 cut(s)	183, 1537, 2028
BciVI	GTATCC	2 cut(s)	1307, 1491
BclI	TGATCA	1 cut(s)	1948
BcnI	CCSGG	3 cut(s)	1308, 1309, 1547
BcoDI	GTCTC	3 cut(s)	95, 129, 1547
BfaI	CTAG	6 cut(s)	1127, 1136, 1199, 1209, 1283, 2066
BfmI	CTRYAG	4 cut(s)	12, 731, 1170, 1788
BfoI	RGCGCY	1 cut(s)	2170
BfuI	GTATCC	2 cut(s)	1307, 1491
BglI	GCCNNNNNGGC	1 cut(s)	1624
BglII	AGATCT	1 cut(s)	1006
Bme1390I	CCNGG	6 cut(s)	183, 1308, 1309, 1537, 1547, 2028
Bme18I	GGWCC	2 cut(s)	626, 1828
BmeT110I	CYCGRG	3 cut(s)	830, 1151, 1307
BmgT120I	GGNCC	6 cut(s)	626, 828, 1305, 1617, 1828, 2037
BmiI	GGNNCC	5 cut(s)	627, 1002, 1830, 1885, 2168
BmrFI	CCNGG	6 cut(s)	183, 1308, 1309, 1537, 1547, 2028
BmsI	GCATC	4 cut(s)	877, 1285, 1519, 2000
BmtI	GCTAGC	1 cut(s)	1202
BpmI	CTGGAG	2 cut(s)	801, 939
Bpu14I	TTCGAA	2 cut(s)	131, 1747
BpuEI	CTTGAG	3 cut(s)	1001, 1125, 1952
BpuMI	CCSGG	3 cut(s)	1308, 1309, 1547
BsaAI	YACGTR	1 cut(s)	2048
BsaHI	GRCGYC	1 cut(s)	2167
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	3 cut(s)	1253, 1307, 1308
BsaWI	WCCGGW	2 cut(s)	628, 1639
Bsc4I	CCNNNNNNNGG	8 cut(s)	49, 50, 803, 804, 1068, 1087, 1686, 2078
Bse1I	ACTGG	6 cut(s)	818, 946, 1649, 1691, 1739, 1901
BseAI	TCCGGA	1 cut(s)	1639
BseBI	CCWGG	3 cut(s)	183, 1537, 2028
BseDI	CCNNGG	3 cut(s)	1253, 1307, 1308
BseGI	GGATG	6 cut(s)	250, 448, 469, 868, 1055, 1096
BseLI	CCNNNNNNNGG	8 cut(s)	49, 50, 803, 804, 1068, 1087, 1686, 2078
BseMII	CTCAG	2 cut(s)	288, 2101
BseNI	ACTGG	6 cut(s)	818, 946, 1649, 1691, 1739, 1901
BseRI	GAGGAG	4 cut(s)	314, 575, 769, 1495
BseSI	GKGCMC	3 cut(s)	220, 1247, 2152
BseXI	GCAGC	9 cut(s)	26, 187, 717, 745, 868, 1544, 1774, 1802, 1996
BshFI	GGCC	7 cut(s)	80, 829, 1306, 1606, 1618, 2026, 2039
BshNI	GGYRCC	2 cut(s)	1000, 2166
BsiHKAI	GWGCWC	2 cut(s)	1247, 2152
BsiHKCI	CYCGRG	3 cut(s)	830, 1151, 1307
BsiSI	CCGG	6 cut(s)	629, 1308, 1454, 1547, 1607, 1640
BslFI	GGGAC	2 cut(s)	1529, 1814
BslI	CCNNNNNNNGG	8 cut(s)	49, 50, 803, 804, 1068, 1087, 1686, 2078
BsmAI	GTCTC	3 cut(s)	95, 129, 1547
BsmBI	CGTCTC	1 cut(s)	129
BsmFI	GGGAC	2 cut(s)	1529, 1814
BsmI	GAATGC	4 cut(s)	517, 884, 1258, 1743
BsnI	GGCC	7 cut(s)	80, 829, 1306, 1606, 1618, 2026, 2039
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	3 cut(s)	830, 1151, 1307
Bsp119I	TTCGAA	2 cut(s)	131, 1747
Bsp1286I	GDGCHC	3 cut(s)	220, 1247, 2152
Bsp13I	TCCGGA	1 cut(s)	1639
Bsp1407I	TGTACA	1 cut(s)	1052
BspACI	CCGC	7 cut(s)	5, 74, 582, 773, 1062, 1236, 1239
BspANI	GGCC	7 cut(s)	80, 829, 1306, 1606, 1618, 2026, 2039
BspCNI	CTCAG	2 cut(s)	289, 2100
BspEI	TCCGGA	1 cut(s)	1639
BspHI	TCATGA	1 cut(s)	283
BspLI	GGNNCC	5 cut(s)	627, 1002, 1830, 1885, 2168
BspMAI	CTGCAG	3 cut(s)	16, 735, 1792
BspOI	GCTAGC	1 cut(s)	1202
BspPI	GGATC	6 cut(s)	193, 555, 632, 1603, 2019, 2063
BspQI	GCTCTTC	2 cut(s)	420, 1581
BspT104I	TTCGAA	2 cut(s)	131, 1747
BspT107I	GGYRCC	2 cut(s)	1000, 2166
BspTNI	GGTCTC	1 cut(s)	95
BsrGI	TGTACA	1 cut(s)	1052
BsrI	ACTGG	6 cut(s)	818, 946, 1649, 1691, 1739, 1901
BssECI	CCNNGG	3 cut(s)	1253, 1307, 1308
BssNI	GRCGYC	1 cut(s)	2167
BssT1I	CCWWGG	1 cut(s)	1253
Bst2UI	CCWGG	3 cut(s)	183, 1537, 2028
Bst4CI	ACNGT	2 cut(s)	1171, 1249
Bst6I	CTCTTC	6 cut(s)	420, 590, 602, 798, 987, 1581
BstACI	GRCGYC	1 cut(s)	2167
BstAUI	TGTACA	1 cut(s)	1052
BstBAI	YACGTR	1 cut(s)	2048
BstBI	TTCGAA	2 cut(s)	131, 1747
BstC8I	GCNNGC	5 cut(s)	683, 879, 1200, 1944, 1989
BstDEI	CTNAG	2 cut(s)	297, 2087
BstENI	CCTNNNNNAGG	1 cut(s)	1085
BstF5I	GGATG	6 cut(s)	250, 448, 469, 868, 1055, 1096
BstH2I	RGCGCY	1 cut(s)	2170
BstHHI	GCGC	1 cut(s)	2169
BstMAI	GTCTC	3 cut(s)	95, 129, 1547
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 678, 742, 874, 1070, 1242, 1358, 1624
BstNI	CCWGG	3 cut(s)	183, 1537, 2028
BstNSI	RCATGY	1 cut(s)	1946
BstSCI	CCNGG	6 cut(s)	181, 1306, 1307, 1535, 1545, 2026
BstSFI	CTRYAG	4 cut(s)	12, 731, 1170, 1788
BstSLI	GKGCMC	3 cut(s)	220, 1247, 2152
BstV1I	GCAGC	9 cut(s)	26, 187, 717, 745, 868, 1544, 1774, 1802, 1996
BstX2I	RGATCY	2 cut(s)	1006, 2068
BstXI	CCANNNNNNTGG	2 cut(s)	825, 2034
BstYI	RGATCY	2 cut(s)	1006, 2068
BsuI	GTATCC	2 cut(s)	1307, 1491
BsuRI	GGCC	7 cut(s)	80, 829, 1306, 1606, 1618, 2026, 2039
BtsCI	GGATG	6 cut(s)	250, 448, 469, 868, 1055, 1096
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	5 cut(s)	144, 1231, 1245, 1429, 1684
Cac8I	GCNNGC	5 cut(s)	683, 879, 1200, 1944, 1989
CciI	TCATGA	1 cut(s)	283
CfoI	GCGC	1 cut(s)	2169
Cfr13I	GGNCC	6 cut(s)	626, 828, 1305, 1617, 1828, 2037
Cfr9I	CCCGGG	1 cut(s)	1307
Csp6I	GTAC	5 cut(s)	144, 1001, 1053, 1250, 1914
CviAII	CATG	7 cut(s)	284, 666, 1337, 1762, 1838, 1943, 2163
CviQI	GTAC	5 cut(s)	144, 1001, 1053, 1250, 1914
DdeI	CTNAG	2 cut(s)	297, 2087
DinI	GGCGCC	1 cut(s)	2168
DrdI	GACNNNNNNGTC	1 cut(s)	818
DseDI	GACNNNNNNGTC	1 cut(s)	818
EaeI	YGGCCR	3 cut(s)	78, 1604, 2024
Eam1104I	CTCTTC	6 cut(s)	420, 590, 602, 798, 987, 1581
EarI	CTCTTC	6 cut(s)	420, 590, 602, 798, 987, 1581
Eco130I	CCWWGG	1 cut(s)	1253
Eco31I	GGTCTC	1 cut(s)	95
Eco32I	GATATC	2 cut(s)	1045, 1637
Eco47I	GGWCC	2 cut(s)	626, 1828
Eco57I	CTGAAG	1 cut(s)	1374
Eco88I	CYCGRG	3 cut(s)	830, 1151, 1307
EcoNI	CCTNNNNNAGG	1 cut(s)	1085
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	3 cut(s)	181, 1535, 2026
EcoRV	GATATC	2 cut(s)	1045, 1637
EcoT14I	CCWWGG	1 cut(s)	1253
EgeI	GGCGCC	1 cut(s)	2168
EheI	GGCGCC	1 cut(s)	2168
ErhI	CCWWGG	1 cut(s)	1253
Esp3I	CGTCTC	1 cut(s)	129
FaeI	CATG	7 cut(s)	287, 669, 1340, 1765, 1841, 1946, 2166
FalI	AAGNNNNNCTT	4 cut(s)	1186, 1218, 2101, 2133
FaqI	GGGAC	2 cut(s)	1529, 1814
FatI	CATG	7 cut(s)	283, 665, 1336, 1761, 1837, 1942, 2162
FauI	CCCGC	1 cut(s)	1232
FauNDI	CATATG	1 cut(s)	1930
FbaI	TGATCA	1 cut(s)	1948
FokI	GGATG	6 cut(s)	257, 455, 476, 855, 1062, 1103
FspBI	CTAG	6 cut(s)	1127, 1136, 1199, 1209, 1283, 2066
GlaI	GCGC	1 cut(s)	2168
GsuI	CTGGAG	2 cut(s)	801, 939
HaeII	RGCGCY	1 cut(s)	2170
HaeIII	GGCC	7 cut(s)	80, 829, 1306, 1606, 1618, 2026, 2039
HapII	CCGG	6 cut(s)	629, 1308, 1454, 1547, 1607, 1640
HhaI	GCGC	1 cut(s)	2169
Hin1I	GRCGYC	1 cut(s)	2167
Hin1II	CATG	7 cut(s)	287, 669, 1340, 1765, 1841, 1946, 2166
Hin6I	GCGC	1 cut(s)	2167
HinP1I	GCGC	1 cut(s)	2167
HincII	GTYRAC	3 cut(s)	1132, 1329, 1702
HindII	GTYRAC	3 cut(s)	1132, 1329, 1702
HindIII	AAGCTT	1 cut(s)	875
HinfI	GANTC	7 cut(s)	587, 914, 983, 1058, 1457, 1904, 2062
HpaII	CCGG	6 cut(s)	629, 1308, 1454, 1547, 1607, 1640
Hpy166II	GTNNAC	8 cut(s)	111, 120, 764, 1132, 1245, 1329, 1702, 2150
Hpy188I	TCNGA	6 cut(s)	226, 298, 592, 642, 1049, 1600
Hpy8I	GTNNAC	8 cut(s)	111, 120, 764, 1132, 1245, 1329, 1702, 2150
HpyCH4III	ACNGT	2 cut(s)	1171, 1249
HpyCH4IV	ACGT	2 cut(s)	122, 2047
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 678, 742, 874, 1070, 1242, 1358, 1624
HpyF3I	CTNAG	2 cut(s)	297, 2087
HpySE526I	ACGT	2 cut(s)	122, 2047
Hsp92I	GRCGYC	1 cut(s)	2167
Hsp92II	CATG	7 cut(s)	287, 669, 1340, 1765, 1841, 1946, 2166
HspAI	GCGC	1 cut(s)	2167
KasI	GGCGCC	1 cut(s)	2166
Kpn2I	TCCGGA	1 cut(s)	1639
KpnI	GGTACC	1 cut(s)	1004
Ksp22I	TGATCA	1 cut(s)	1948
LguI	GCTCTTC	2 cut(s)	420, 1581
LmnI	GCTCC	3 cut(s)	192, 678, 865
Lsp1109I	GCAGC	9 cut(s)	26, 187, 717, 745, 868, 1544, 1774, 1802, 1996
LweI	GCATC	4 cut(s)	877, 1285, 1519, 2000
MaeI	CTAG	6 cut(s)	1127, 1136, 1199, 1209, 1283, 2066
MaeII	ACGT	2 cut(s)	122, 2047
MaeIII	GTNAC	2 cut(s)	354, 2048
MfeI	CAATTG	1 cut(s)	1995
MflI	RGATCY	2 cut(s)	1006, 2068
MhlI	GDGCHC	3 cut(s)	220, 1247, 2152
MluCI	AATT	5 cut(s)	133, 383, 554, 688, 1995
Mly113I	GGCGCC	1 cut(s)	2167
MlyI	GAGTC	4 cut(s)	923, 992, 1451, 1913
MmeI	TCCRAC	3 cut(s)	549, 1861, 2055
MroI	TCCGGA	1 cut(s)	1639
MroXI	GAANNNNTTC	1 cut(s)	383
MseI	TTAA	6 cut(s)	291, 345, 621, 957, 1097, 1301
MslI	CAYNNNNRTG	1 cut(s)	1263
MspA1I	CMGCKG	1 cut(s)	74
MspI	CCGG	6 cut(s)	629, 1308, 1454, 1547, 1607, 1640
MspR9I	CCNGG	6 cut(s)	183, 1308, 1309, 1537, 1547, 2028
MunI	CAATTG	1 cut(s)	1995
Mva1269I	GAATGC	4 cut(s)	517, 884, 1258, 1743
MvaI	CCWGG	3 cut(s)	183, 1537, 2028
MwoI	GCNNNNNNNGC	8 cut(s)	11, 678, 742, 874, 1070, 1242, 1358, 1624
NarI	GGCGCC	1 cut(s)	2167
NciI	CCSGG	3 cut(s)	1308, 1309, 1547
NdeI	CATATG	1 cut(s)	1930
NheI	GCTAGC	1 cut(s)	1198
NlaIII	CATG	7 cut(s)	287, 669, 1340, 1765, 1841, 1946, 2166
NlaIV	GGNNCC	5 cut(s)	627, 1002, 1830, 1885, 2168
NmuCI	GTSAC	1 cut(s)	2048
NspI	RCATGY	1 cut(s)	1946
NspV	TTCGAA	2 cut(s)	131, 1747
PaeI	GCATGC	1 cut(s)	1946
PaeR7I	CTCGAG	1 cut(s)	1151
PagI	TCATGA	1 cut(s)	283
PciSI	GCTCTTC	2 cut(s)	420, 1581
PcsI	WCGNNNNNNNCGW	1 cut(s)	128
PctI	GAATGC	4 cut(s)	517, 884, 1258, 1743
PdmI	GAANNNNTTC	1 cut(s)	383
PfeI	GAWTC	3 cut(s)	587, 1058, 2062
PflMI	CCANNNNNTGG	1 cut(s)	1686
PfoI	TCCNGGA	1 cut(s)	181
PleI	GAGTC	4 cut(s)	922, 991, 1451, 1912
PluTI	GGCGCC	1 cut(s)	2170
PpsI	GAGTC	4 cut(s)	922, 991, 1451, 1912
Ppu21I	YACGTR	1 cut(s)	2048
Psp6I	CCWGG	3 cut(s)	181, 1535, 2026
PspGI	CCWGG	3 cut(s)	181, 1535, 2026
PspN4I	GGNNCC	5 cut(s)	627, 1002, 1830, 1885, 2168
PspPI	GGNCC	6 cut(s)	626, 828, 1305, 1617, 1828, 2037
PspXI	VCTCGAGB	1 cut(s)	1151
PstI	CTGCAG	3 cut(s)	16, 735, 1792
PsuI	RGATCY	2 cut(s)	1006, 2068
RsaI	GTAC	5 cut(s)	145, 1002, 1054, 1251, 1915
RsaNI	GTAC	5 cut(s)	144, 1001, 1053, 1250, 1914
RseI	CAYNNNNRTG	1 cut(s)	1263
SapI	GCTCTTC	2 cut(s)	420, 1581
SaqAI	TTAA	6 cut(s)	291, 345, 621, 957, 1097, 1301
Sau96I	GGNCC	6 cut(s)	626, 828, 1305, 1617, 1828, 2037
SchI	GAGTC	4 cut(s)	923, 992, 1451, 1913
ScrFI	CCNGG	6 cut(s)	183, 1308, 1309, 1537, 1547, 2028
SduI	GDGCHC	3 cut(s)	220, 1247, 2152
SfaNI	GCATC	4 cut(s)	877, 1285, 1519, 2000
SfcI	CTRYAG	4 cut(s)	12, 731, 1170, 1788
SfoI	GGCGCC	1 cut(s)	2168
Sfr274I	CTCGAG	1 cut(s)	1151
SfuI	TTCGAA	2 cut(s)	131, 1747
SinI	GGWCC	2 cut(s)	626, 1828
SlaI	CTCGAG	1 cut(s)	1151
SmaI	CCCGGG	1 cut(s)	1309
SmiMI	CAYNNNNRTG	1 cut(s)	1263
SmlI	CTYRAG	4 cut(s)	980, 1140, 1151, 1967
SmoI	CTYRAG	4 cut(s)	980, 1140, 1151, 1967
SphI	GCATGC	1 cut(s)	1946
Sse9I	AATT	5 cut(s)	133, 383, 554, 688, 1995
SsiI	CCGC	7 cut(s)	5, 74, 582, 773, 1062, 1236, 1239
SspDI	GGCGCC	1 cut(s)	2166
SspI	AATATT	1 cut(s)	1396
SspMI	CTAG	6 cut(s)	1127, 1136, 1199, 1209, 1283, 2066
StyD4I	CCNGG	6 cut(s)	181, 1306, 1307, 1535, 1545, 2026
StyI	CCWWGG	1 cut(s)	1253
TaaI	ACNGT	2 cut(s)	1171, 1249
TaiI	ACGT	2 cut(s)	125, 2050
TaqI	TCGA	5 cut(s)	131, 371, 1152, 1629, 1747
TasI	AATT	5 cut(s)	133, 383, 554, 688, 1995
TatI	WGTACW	2 cut(s)	143, 1052
TauI	GCSGC	1 cut(s)	1239
TfiI	GAWTC	3 cut(s)	587, 1058, 2062
Tru1I	TTAA	6 cut(s)	291, 345, 621, 957, 1097, 1301
Tru9I	TTAA	6 cut(s)	291, 345, 621, 957, 1097, 1301
TscAI	CASTG	5 cut(s)	144, 1238, 1252, 1429, 1691
TseFI	GTSAC	1 cut(s)	2048
Tsp45I	GTSAC	1 cut(s)	2048
TspDTI	ATGAA	8 cut(s)	432, 438, 489, 1304, 1431, 1778, 1835, 1849
TspGWI	ACGGA	2 cut(s)	1019, 2061
TspMI	CCCGGG	1 cut(s)	1307
TspRI	CASTG	5 cut(s)	144, 1238, 1252, 1429, 1691
Van91I	CCANNNNNTGG	1 cut(s)	1686
VneI	GTGCAC	2 cut(s)	1243, 2148
VpaK11BI	GGWCC	2 cut(s)	626, 1828
XagI	CCTNNNNNAGG	1 cut(s)	1085
XapI	RAATTY	2 cut(s)	133, 554
XbaI	TCTAGA	2 cut(s)	1282, 2065
XceI	RCATGY	1 cut(s)	1946
XcmI	CCANNNNNNNNNTGG	3 cut(s)	994, 1011, 1533
XhoI	CTCGAG	1 cut(s)	1151
XmaI	CCCGGG	1 cut(s)	1307
XmnI	GAANNNNTTC	1 cut(s)	383
XspI	CTAG	6 cut(s)	1127, 1136, 1199, 1209, 1283, 2066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.