Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003168.1

Orthogroup ID

OG0008564

Physical Location & Seq

Genomic Coordinates Reverse (-)

52931 .. 62003

Gene Structure 9073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003168.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

atgcagttttcagataatgactcgtttcccatttcgagacttcctcgcatccagttagatctttcccatttcagtttagtttactttgttcaagagcatttattagagagagaaatggcggtagctgcagctcggtttggtcgccaagcgaaacgcccgtattggggtttctgtataaagatgacagcggtggccgttatgggtctctgctttatatttgtgtggacaatgtttacgtctccttcgaattcagtgagtacaagaatagagagctttgacaatatagagcagcctcctggatcaaggagcaaaagggtgagcagttctggggcacaatctgagaggaaggtagaggacgggaagaaggtaaatgggtctgttgctttgggtggtcatgaggttaaatctgaggagagggagaagaaggaagtggcgaatacgaaaaaggagagagttaagaagaagttaccagagaaggtgtcgaaagagaaacaattgagtaaggaagatggagatggagatgaagatgaagagccagaagtggtggatggaaaggaagaaggtttggatggtgaagatgaaggtgaaggtgaaggaaatgggaatgcagaaggagagggtgatttgattgaaggggtggatcaggattttgaggagaagttggaagatgatggcggtgaatcggagaagaggggaaacaagagaaataagattaagggtccggtgtttgatccgaaagcacattatcattggaaatcatgtagcacaaggagcaagcacaattacattccttgtattgatatagaagttggctctggaaggctgcagcaatataggcacacagagaggagttgtccacgatcaccgccaatgtgtcttgtgcctcttcccccagatgggtatgaccctccagtccattggcccgagagtaaagagaagatattgtataagaatgtggagcatccaaagcttgctgcattcgtcaaggaacatacttgggtgatggagtctggagaataccttactttccctcaaaaccagtctgagattaagggtggggttcttcactatcttgattccattgaagagatggtaccagatctcgaatggggaaagaatatccgtgtagtgctggatatcggatgtacagattccgcttttggggcttctctccttgataaggatgtattaacattatcattggggttgaaagatgacctagttgacctagctcaagtttccctcgagcgtggttttcctactgtagttagcccattcggaaacagaaggctagctttccctagtggtgtttttgatgttattcactgcggcgggtgcactgtaccttggcattcaaatgggggtaagcatcttctagagatgaataggattttaaggcccgggggatactttatcttgtcaactaaacatgacagctttgaagctgaagaagccgtgaatacattgatggtatctatctgctggaatattttggctcataaaactgatgaagtcagtgatgtgggcgtcaaaatatataagaagccggactcaaatgatttatatacgatgaggaggaagaaacattggatacctttatgcaagggaaatgataacccagatgcagcctggtatgtcccggtgaagacttgtttgcacaccattccatctggtattgaagagcgtggatcagagtggccggaggaatggcccaacaggctcgaaagatatccggactggttgaacgataaagataagttgattgcagacaccaagcactggaaagatattattgacaaatcctatcttattggacttggtaaagcaccttcaagggggacggtgacggtggctaagactaagaccaatgggatagtgaatggtaaaagagatatggtcactccggtgattcgtgccagcttagagaagcaggggtacaaaattattggttcgcatagtggtgtcaaaatttgtagatggacaaagtcacagcttagaggccgaggtggttgctataaacactcgttttatggcatagaaagtcataggtgcatggaggcaacccctagtttggcatgtgccaataaatgtgttttctgttggagacatcatacaaaccctgttggaaagagttggcagtggaagatggacgatccattagagattgtgaaaactgccatagacctgcacagtaaaatgattaagcaaatgagaggagttcctggagttacattggagcgattaacagagggtctctctcccaggcattgtgccttgtcacttgttggtgaacctattatgtatccagagattaatacactagtagatgagctgcatcgtagacggatttctacttttctagtgacaaatgctcaatttcctgaaaaaattagaatgctgaaacctattacacagttatatgtaagtgtggatgctgcaactaaagagagtttgaaggcaattgacaggccactttttggagatttttgggagcgatttattgattccttgaaagctctcaaggaaaaacagcagcgaactgtttatcgcttaactttggtcaagggatggaatacagaagaaattgaggcttattataacatctttagcattggtaaccccgattttgttgaaatcaaaggagttacatattgtggatcgtctgctacctcaaaattgacgatggagaatgtgccctggcatgctgatgttaaagctttttcagaggccttggctttgagaagtaacggcgagtatgaggtcgcatgtgagcatgtccactcatgttgtgtcctcctggcaaaaactaaaaagttcaagatcaatgggcagtggttcacatggatagactatgaaaagtttcatgatctggtggcttctggaaaaccctttgacagtaatgattatatggctgccacaccttcatgggctgtttatggggcagttgaaggtggatttgatccctatcaatctcgatataggaaggagcgacatcacagatcaaaccagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Flavodoxin_1 Methyltransf_29 Radical_SAM Wyosine_form

Protein Analysis

1003

Amino Acids

113.63

Weight (kDa)

6.73

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19430 AT1G19430 AT1G19430
fragaria_vesca	FvH4_2g39800 FvH4_2g39800
malus_domestica	MD08G1031800.v1.1 MD15G1027700.v1.1
prunus_persica	Prupe.1G379400_v2.0.a1
pyrus_communis	pycom08g02510 pycom15g02360
rosa_chinensis	RchiOBHm_Chr6g0301041
rosa_laevigata	RLG00000011282
rosa_multiflora	Rmu_sc0003168.1_g000010 Rmu_sc0035551.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167230
rosa_rugosa	Rorug06G0300200 Rorug06G0300300 Rorug06G0300400 Rorug06G0300500
rosa_samantha	Rh6AG414100 Rh6BG421100 Rh6CG428700 Rh6DG414100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2598
AasI	GACNNNNNNGTC	1 cut(s)	911
Acc36I	ACCTGC	1 cut(s)	2193
Acc65I	GGTACC	1 cut(s)	1093
AccB1I	GGYRCC	1 cut(s)	1093
AccB7I	CCANNNNNTGG	2 cut(s)	1779, 2477
AccI	GTMKAC	1 cut(s)	2341
AccIII	TCCGGA	1 cut(s)	1732
AciI	CCGC	7 cut(s)	119, 188, 675, 866, 1155, 1329, 1332
AclWI	GGATC	7 cut(s)	307, 648, 725, 1696, 2147, 2665, 2954
AcoI	YGGCCR	2 cut(s)	192, 1697
AcsI	RAATTY	2 cut(s)	247, 1968
AcuI	CTGAAG	1 cut(s)	1467
AcyI	GRCGYC	1 cut(s)	1527
AfaI	GTAC	5 cut(s)	259, 1095, 1147, 1344, 1937
AhlI	ACTAGT	1 cut(s)	2320
AjnI	CCWGG	6 cut(s)	295, 1628, 2221, 2261, 2696, 2796
AleI	CACNNNNGTG	1 cut(s)	1904
Alw21I	GWGCWC	1 cut(s)	1340
Alw26I	GTCTC	5 cut(s)	31, 209, 243, 2098, 2258
Alw44I	GTGCAC	1 cut(s)	1336
AlwI	GGATC	7 cut(s)	307, 648, 725, 1696, 2147, 2665, 2954
Ama87I	CYCGRG	3 cut(s)	923, 1244, 1400
Aor13HI	TCCGGA	1 cut(s)	1732
AoxI	GGCC	8 cut(s)	192, 920, 1397, 1697, 1709, 1999, 2468, 2727
ApaLI	GTGCAC	1 cut(s)	1336
ApoI	RAATTY	2 cut(s)	247, 1968
AseI	ATTAAT	1 cut(s)	2313
Asp700I	GAANNNNTTC	1 cut(s)	2859
Asp718I	GGTACC	1 cut(s)	1093
AspS9I	GGNCC	4 cut(s)	719, 921, 1398, 1710
AsuC2I	CCSGG	3 cut(s)	1401, 1402, 1640
AsuII	TTCGAA	1 cut(s)	245
AsuNHI	GCTAGC	1 cut(s)	1291
AvaI	CYCGRG	3 cut(s)	923, 1244, 1400
AvaII	GGWCC	1 cut(s)	719
BaeGI	GKGCMC	3 cut(s)	334, 1340, 2697
BanI	GGYRCC	1 cut(s)	1093
BarI	GAAGNNNNNNTAC	6 cut(s)	1077, 1109, 1813, 1845, 1919, 1951
BbsI	GAAGAC	1 cut(s)	1652
Bbv12I	GWGCWC	1 cut(s)	1340
BceAI	ACGGC	3 cut(s)	179, 1439, 2764
BcgI	CGANNNNNNTGC	2 cut(s)	1992, 2026
BciT130I	CCWGG	6 cut(s)	297, 1630, 2223, 2263, 2698, 2798
BciVI	GTATCC	3 cut(s)	1400, 1584, 2313
BcnI	CCSGG	3 cut(s)	1401, 1402, 1640
BcoDI	GTCTC	5 cut(s)	31, 209, 243, 2098, 2258
BcuI	ACTAGT	1 cut(s)	2320
BfaI	CTAG	8 cut(s)	1220, 1229, 1292, 1302, 1376, 2067, 2321, 2360
BfmI	CTRYAG	3 cut(s)	126, 824, 1263
BfuAI	ACCTGC	1 cut(s)	2193
BfuI	GTATCC	3 cut(s)	1400, 1584, 2313
BglI	GCCNNNNNGGC	1 cut(s)	1717
BglII	AGATCT	2 cut(s)	58, 1099
Bme1390I	CCNGG	9 cut(s)	297, 1401, 1402, 1630, 1640, 2223, 2263, 2698, 2798
Bme18I	GGWCC	1 cut(s)	719
BmeT110I	CYCGRG	3 cut(s)	923, 1244, 1400
BmgT120I	GGNCC	4 cut(s)	719, 921, 1398, 1710
BmiI	GGNNCC	2 cut(s)	720, 1095
BmrFI	CCNGG	9 cut(s)	297, 1401, 1402, 1630, 1640, 2223, 2263, 2698, 2798
BmsI	GCATC	6 cut(s)	57, 970, 1378, 1612, 2344, 2422
BmtI	GCTAGC	1 cut(s)	1295
BpiI	GAAGAC	1 cut(s)	1652
BplI	GAGNNNNNCTC	4 cut(s)	28, 60, 2240, 2272
BpmI	CTGGAG	3 cut(s)	894, 1032, 2244
Bpu14I	TTCGAA	1 cut(s)	245
BpuEI	CTTGAG	2 cut(s)	1218, 2504
BpuMI	CCSGG	3 cut(s)	1401, 1402, 1640
BsaBI	GATNNNNATC	1 cut(s)	2964
BsaHI	GRCGYC	1 cut(s)	1527
BsaI	GGTCTC	2 cut(s)	209, 2258
BsaJI	CCNNGG	7 cut(s)	1346, 1400, 1401, 2002, 2261, 2696, 2730
BsaWI	WCCGGW	3 cut(s)	721, 1732, 1903
Bse1I	ACTGG	6 cut(s)	52, 911, 1039, 1742, 1784, 3007
Bse8I	GATNNNNATC	1 cut(s)	2964
BseAI	TCCGGA	1 cut(s)	1732
BseBI	CCWGG	6 cut(s)	297, 1630, 2223, 2263, 2698, 2798
BseDI	CCNNGG	7 cut(s)	1346, 1400, 1401, 2002, 2261, 2696, 2730
BseGI	GGATG	8 cut(s)	48, 553, 574, 961, 1148, 1189, 2437, 2573
BseJI	GATNNNNATC	1 cut(s)	2964
BseMII	CTCAG	3 cut(s)	330, 399, 1035
BseNI	ACTGG	6 cut(s)	52, 911, 1039, 1742, 1784, 3007
BseRI	GAGGAG	5 cut(s)	425, 668, 862, 1588, 2229
BseSI	GKGCMC	3 cut(s)	334, 1340, 2697
BsgI	GTGCAG	1 cut(s)	2171
BshFI	GGCC	8 cut(s)	194, 922, 1399, 1699, 1711, 2001, 2470, 2729
BshNI	GGYRCC	1 cut(s)	1093
BsiHKAI	GWGCWC	1 cut(s)	1340
BsiHKCI	CYCGRG	3 cut(s)	923, 1244, 1400
BsiSI	CCGG	7 cut(s)	722, 1401, 1547, 1640, 1700, 1733, 1904
BslFI	GGGAC	2 cut(s)	1622, 1852
BsmAI	GTCTC	5 cut(s)	31, 209, 243, 2098, 2258
BsmBI	CGTCTC	1 cut(s)	243
BsmFI	GGGAC	2 cut(s)	1622, 1852
BsmI	GAATGC	4 cut(s)	610, 977, 1351, 2400
BsnI	GGCC	8 cut(s)	194, 922, 1399, 1699, 1711, 2001, 2470, 2729
Bso31I	GGTCTC	2 cut(s)	209, 2258
BsoBI	CYCGRG	3 cut(s)	923, 1244, 1400
Bsp119I	TTCGAA	1 cut(s)	245
Bsp1286I	GDGCHC	3 cut(s)	334, 1340, 2697
Bsp13I	TCCGGA	1 cut(s)	1732
Bsp1407I	TGTACA	1 cut(s)	1145
BspACI	CCGC	7 cut(s)	119, 188, 675, 866, 1155, 1329, 1332
BspANI	GGCC	8 cut(s)	194, 922, 1399, 1699, 1711, 2001, 2470, 2729
BspCNI	CTCAG	3 cut(s)	331, 400, 1036
BspEI	TCCGGA	1 cut(s)	1732
BspHI	TCATGA	2 cut(s)	394, 2863
BspLI	GGNNCC	2 cut(s)	720, 1095
BspMAI	CTGCAG	2 cut(s)	130, 828
BspMI	ACCTGC	1 cut(s)	2193
BspOI	GCTAGC	1 cut(s)	1295
BspPI	GGATC	7 cut(s)	307, 648, 725, 1696, 2147, 2665, 2954
BspQI	GCTCTTC	2 cut(s)	525, 1674
BspT104I	TTCGAA	1 cut(s)	245
BspT107I	GGYRCC	1 cut(s)	1093
BspTNI	GGTCTC	2 cut(s)	209, 2258
BsrGI	TGTACA	1 cut(s)	1145
BsrI	ACTGG	6 cut(s)	52, 911, 1039, 1742, 1784, 3007
BssECI	CCNNGG	7 cut(s)	1346, 1400, 1401, 2002, 2261, 2696, 2730
BssNI	GRCGYC	1 cut(s)	1527
BssT1I	CCWWGG	2 cut(s)	1346, 2730
Bst2UI	CCWGG	6 cut(s)	297, 1630, 2223, 2263, 2698, 2798
Bst4CI	ACNGT	8 cut(s)	1264, 1342, 1843, 1849, 2192, 2415, 2542, 2897
Bst6I	CTCTTC	5 cut(s)	525, 683, 891, 1080, 1674
BstACI	GRCGYC	1 cut(s)	1527
BstAUI	TGTACA	1 cut(s)	1145
BstBI	TTCGAA	1 cut(s)	245
BstC8I	GCNNGC	5 cut(s)	776, 972, 1293, 1918, 2703
BstDEI	CTNAG	7 cut(s)	339, 408, 1044, 1854, 1860, 1921, 1994
BstEII	GGTNACC	1 cut(s)	2615
BstENI	CCTNNNNNAGG	1 cut(s)	1178
BstF5I	GGATG	8 cut(s)	48, 553, 574, 961, 1148, 1189, 2437, 2573
BstMAI	GTCTC	5 cut(s)	31, 209, 243, 2098, 2258
BstMWI	GCNNNNNNNGC	8 cut(s)	125, 771, 835, 967, 1163, 1335, 1451, 1717
BstNI	CCWGG	6 cut(s)	297, 1630, 2223, 2263, 2698, 2798
BstNSI	RCATGY	4 cut(s)	2079, 2705, 2769, 2777
BstPI	GGTNACC	1 cut(s)	2615
BstSCI	CCNGG	9 cut(s)	295, 1399, 1400, 1628, 1638, 2221, 2261, 2696, 2796
BstSFI	CTRYAG	3 cut(s)	126, 824, 1263
BstSLI	GKGCMC	3 cut(s)	334, 1340, 2697
BstV2I	GAAGAC	1 cut(s)	1652
BstX2I	RGATCY	2 cut(s)	58, 1099
BstXI	CCANNNNNNTGG	1 cut(s)	918
BstYI	RGATCY	2 cut(s)	58, 1099
BsuI	GTATCC	3 cut(s)	1400, 1584, 2313
BsuRI	GGCC	8 cut(s)	194, 922, 1399, 1699, 1711, 2001, 2470, 2729
BtsCI	GGATG	8 cut(s)	48, 553, 574, 961, 1148, 1189, 2437, 2573
BtsI	GCAGTG	3 cut(s)	1324, 2144, 2837
BtsIMutI	CAGTG	7 cut(s)	258, 1324, 1338, 1522, 1777, 2144, 2837
BveI	ACCTGC	1 cut(s)	2193
Cac8I	GCNNGC	5 cut(s)	776, 972, 1293, 1918, 2703
CciI	TCATGA	2 cut(s)	394, 2863
Cfr13I	GGNCC	4 cut(s)	719, 921, 1398, 1710
Cfr9I	CCCGGG	1 cut(s)	1400
CseI	GACGC	1 cut(s)	1516
Csp6I	GTAC	5 cut(s)	258, 1094, 1146, 1343, 1936
CspCI	CAANNNNNGTGG	2 cut(s)	2768, 2803
CviQI	GTAC	5 cut(s)	258, 1094, 1146, 1343, 1936
DdeI	CTNAG	7 cut(s)	339, 408, 1044, 1854, 1860, 1921, 1994
DrdI	GACNNNNNNGTC	1 cut(s)	911
DseDI	GACNNNNNNGTC	1 cut(s)	911
EaeI	YGGCCR	2 cut(s)	192, 1697
Eam1104I	CTCTTC	5 cut(s)	525, 683, 891, 1080, 1674
EarI	CTCTTC	5 cut(s)	525, 683, 891, 1080, 1674
Eco130I	CCWWGG	2 cut(s)	1346, 2730
Eco147I	AGGCCT	1 cut(s)	2729
Eco31I	GGTCTC	2 cut(s)	209, 2258
Eco32I	GATATC	2 cut(s)	1138, 1730
Eco47I	GGWCC	1 cut(s)	719
Eco57I	CTGAAG	1 cut(s)	1467
Eco88I	CYCGRG	3 cut(s)	923, 1244, 1400
Eco91I	GGTNACC	1 cut(s)	2615
EcoNI	CCTNNNNNAGG	1 cut(s)	1178
EcoO65I	GGTNACC	1 cut(s)	2615
EcoRI	GAATTC	1 cut(s)	247
EcoRII	CCWGG	6 cut(s)	295, 1628, 2221, 2261, 2696, 2796
EcoRV	GATATC	2 cut(s)	1138, 1730
EcoT14I	CCWWGG	2 cut(s)	1346, 2730
ErhI	CCWWGG	2 cut(s)	1346, 2730
Esp3I	CGTCTC	1 cut(s)	243
FalI	AAGNNNNNCTT	2 cut(s)	1279, 1311
FaqI	GGGAC	2 cut(s)	1622, 1852
FauI	CCCGC	1 cut(s)	1325
FblI	GTMKAC	1 cut(s)	2341
FokI	GGATG	8 cut(s)	35, 560, 581, 948, 1155, 1196, 2444, 2580
FspBI	CTAG	8 cut(s)	1220, 1229, 1292, 1302, 1376, 2067, 2321, 2360
GsuI	CTGGAG	3 cut(s)	894, 1032, 2244
HaeIII	GGCC	8 cut(s)	194, 922, 1399, 1699, 1711, 2001, 2470, 2729
HapII	CCGG	7 cut(s)	722, 1401, 1547, 1640, 1700, 1733, 1904
HgaI	GACGC	1 cut(s)	1516
Hin1I	GRCGYC	1 cut(s)	1527
HincII	GTYRAC	2 cut(s)	1225, 1422
HindII	GTYRAC	2 cut(s)	1225, 1422
HindIII	AAGCTT	2 cut(s)	968, 2715
HinfI	GANTC	8 cut(s)	20, 680, 1007, 1076, 1151, 1550, 1909, 2504
HpaII	CCGG	7 cut(s)	722, 1401, 1547, 1640, 1700, 1733, 1904
HpyCH4III	ACNGT	8 cut(s)	1264, 1342, 1843, 1849, 2192, 2415, 2542, 2897
HpyCH4IV	ACGT	1 cut(s)	236
HpyF10VI	GCNNNNNNNGC	8 cut(s)	125, 771, 835, 967, 1163, 1335, 1451, 1717
HpyF3I	CTNAG	7 cut(s)	339, 408, 1044, 1854, 1860, 1921, 1994
HpySE526I	ACGT	1 cut(s)	236
Hsp92I	GRCGYC	1 cut(s)	1527
Kpn2I	TCCGGA	1 cut(s)	1732
KpnI	GGTACC	1 cut(s)	1097
LguI	GCTCTTC	2 cut(s)	525, 1674
LmnI	GCTCC	6 cut(s)	306, 771, 958, 2236, 2491, 2986
LweI	GCATC	6 cut(s)	57, 970, 1378, 1612, 2344, 2422
MaeI	CTAG	8 cut(s)	1220, 1229, 1292, 1302, 1376, 2067, 2321, 2360
MaeII	ACGT	1 cut(s)	236
MfeI	CAATTG	2 cut(s)	494, 2460
MflI	RGATCY	2 cut(s)	58, 1099
MhlI	GDGCHC	3 cut(s)	334, 1340, 2697
MlyI	GAGTC	3 cut(s)	14, 1016, 1544
MmeI	TCCRAC	3 cut(s)	642, 2081, 2104
MroI	TCCGGA	1 cut(s)	1732
MroXI	GAANNNNTTC	1 cut(s)	2859
MslI	CAYNNNNRTG	5 cut(s)	1356, 1904, 1959, 2706, 2923
MspA1I	CMGCKG	1 cut(s)	188
MspI	CCGG	7 cut(s)	722, 1401, 1547, 1640, 1700, 1733, 1904
MspR9I	CCNGG	9 cut(s)	297, 1401, 1402, 1630, 1640, 2223, 2263, 2698, 2798
MunI	CAATTG	2 cut(s)	494, 2460
Mva1269I	GAATGC	4 cut(s)	610, 977, 1351, 2400
MvaI	CCWGG	6 cut(s)	297, 1630, 2223, 2263, 2698, 2798
MwoI	GCNNNNNNNGC	8 cut(s)	125, 771, 835, 967, 1163, 1335, 1451, 1717
NciI	CCSGG	3 cut(s)	1401, 1402, 1640
NheI	GCTAGC	1 cut(s)	1291
NlaIV	GGNNCC	2 cut(s)	720, 1095
NmeAIII	GCCGAG	1 cut(s)	2027
NmuCI	GTSAC	5 cut(s)	1843, 1897, 1986, 2277, 2362
NspI	RCATGY	4 cut(s)	2079, 2705, 2769, 2777
NspV	TTCGAA	1 cut(s)	245
OliI	CACNNNNGTG	1 cut(s)	1904
PaeI	GCATGC	1 cut(s)	2705
PaeR7I	CTCGAG	1 cut(s)	1244
PagI	TCATGA	2 cut(s)	394, 2863
PceI	AGGCCT	1 cut(s)	2729
PciSI	GCTCTTC	2 cut(s)	525, 1674
PcsI	WCGNNNNNNNCGW	1 cut(s)	242
PctI	GAATGC	4 cut(s)	610, 977, 1351, 2400
PdmI	GAANNNNTTC	1 cut(s)	2859
PfeI	GAWTC	5 cut(s)	680, 1076, 1151, 1909, 2504
PflFI	GACNNNGTC	1 cut(s)	1984
PflMI	CCANNNNNTGG	2 cut(s)	1779, 2477
PfoI	TCCNGGA	2 cut(s)	295, 2221
PleI	GAGTC	3 cut(s)	14, 1015, 1544
PpsI	GAGTC	3 cut(s)	14, 1015, 1544
PshBI	ATTAAT	1 cut(s)	2313
PsiI	TTATAA	1 cut(s)	2598
Psp6I	CCWGG	6 cut(s)	295, 1628, 2221, 2261, 2696, 2796
PspEI	GGTNACC	1 cut(s)	2615
PspGI	CCWGG	6 cut(s)	295, 1628, 2221, 2261, 2696, 2796
PspN4I	GGNNCC	2 cut(s)	720, 1095
PspPI	GGNCC	4 cut(s)	719, 921, 1398, 1710
PspXI	VCTCGAGB	1 cut(s)	1244
PstI	CTGCAG	2 cut(s)	130, 828
PsuI	RGATCY	2 cut(s)	58, 1099
PsyI	GACNNNGTC	1 cut(s)	1984
RsaI	GTAC	5 cut(s)	259, 1095, 1147, 1344, 1937
RsaNI	GTAC	5 cut(s)	258, 1094, 1146, 1343, 1936
RseI	CAYNNNNRTG	5 cut(s)	1356, 1904, 1959, 2706, 2923
SapI	GCTCTTC	2 cut(s)	525, 1674
Sau96I	GGNCC	4 cut(s)	719, 921, 1398, 1710
SchI	GAGTC	3 cut(s)	14, 1016, 1544
ScrFI	CCNGG	9 cut(s)	297, 1401, 1402, 1630, 1640, 2223, 2263, 2698, 2798
SduI	GDGCHC	3 cut(s)	334, 1340, 2697
SfaNI	GCATC	6 cut(s)	57, 970, 1378, 1612, 2344, 2422
SfcI	CTRYAG	3 cut(s)	126, 824, 1263
Sfr274I	CTCGAG	1 cut(s)	1244
SfuI	TTCGAA	1 cut(s)	245
SinI	GGWCC	1 cut(s)	719
SlaI	CTCGAG	1 cut(s)	1244
SmaI	CCCGGG	1 cut(s)	1402
SmiMI	CAYNNNNRTG	5 cut(s)	1356, 1904, 1959, 2706, 2923
SmlI	CTYRAG	3 cut(s)	1233, 1244, 2519
SmoI	CTYRAG	3 cut(s)	1233, 1244, 2519
SpeI	ACTAGT	1 cut(s)	2320
SphI	GCATGC	1 cut(s)	2705
SseBI	AGGCCT	1 cut(s)	2729
SsiI	CCGC	7 cut(s)	119, 188, 675, 866, 1155, 1329, 1332
SspI	AATATT	1 cut(s)	1489
SspMI	CTAG	8 cut(s)	1220, 1229, 1292, 1302, 1376, 2067, 2321, 2360
StuI	AGGCCT	1 cut(s)	2729
StyD4I	CCNGG	9 cut(s)	295, 1399, 1400, 1628, 1638, 2221, 2261, 2696, 2796
StyI	CCWWGG	2 cut(s)	1346, 2730
TaaI	ACNGT	8 cut(s)	1264, 1342, 1843, 1849, 2192, 2415, 2542, 2897
TaiI	ACGT	1 cut(s)	239
TaqI	TCGA	7 cut(s)	35, 245, 482, 1104, 1245, 1722, 2974
TatI	WGTACW	2 cut(s)	257, 1145
TauI	GCSGC	1 cut(s)	1332
TfiI	GAWTC	5 cut(s)	680, 1076, 1151, 1909, 2504
TscAI	CASTG	7 cut(s)	258, 1331, 1345, 1522, 1784, 2144, 2837
TseFI	GTSAC	5 cut(s)	1843, 1897, 1986, 2277, 2362
Tsp45I	GTSAC	5 cut(s)	1843, 1897, 1986, 2277, 2362
TspDTI	ATGAA	8 cut(s)	537, 543, 594, 1397, 1524, 2852, 2868, 2913
TspGWI	ACGGA	2 cut(s)	1112, 2359
TspMI	CCCGGG	1 cut(s)	1400
TspRI	CASTG	7 cut(s)	258, 1331, 1345, 1522, 1784, 2144, 2837
Tth111I	GACNNNGTC	1 cut(s)	1984
Van91I	CCANNNNNTGG	2 cut(s)	1779, 2477
VneI	GTGCAC	1 cut(s)	1336
VpaK11BI	GGWCC	1 cut(s)	719
VspI	ATTAAT	1 cut(s)	2313
XagI	CCTNNNNNAGG	1 cut(s)	1178
XapI	RAATTY	2 cut(s)	247, 1968
XbaI	TCTAGA	1 cut(s)	1375
XceI	RCATGY	4 cut(s)	2079, 2705, 2769, 2777
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1087, 1104, 1626
XhoI	CTCGAG	1 cut(s)	1244
XmaI	CCCGGG	1 cut(s)	1400
XmiI	GTMKAC	1 cut(s)	2341
XmnI	GAANNNNTTC	1 cut(s)	2859
XspI	CTAG	8 cut(s)	1220, 1229, 1292, 1302, 1376, 2067, 2321, 2360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.