Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009660

Physical Location & Seq

Genomic Coordinates Forward (+)

6703352 .. 6709130

Gene Structure 5779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1096100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGAGCAGAGCGAAACGGTCTCCGAAGTCGCGCCCAAGAAATTGGCGAGGCAATTGGATTTCACGACGCTGTGTCGATCGTCAGCGAGTGCGGCGGTGCCGGACGTACAGCTACAGCTTCAGACACCGTCAGTGGCGCAGCAGCAGCCACAAATCTCACCGGCAAAACCACAGTTGCATTTGCATTTACAGTCGCCGCAGCCGGCGGCGGTCCATTCCCAGAAGCAATTAACGCCGCCGCCGGCGATTCCGCAGTTTCAGGCTCGGCCGAGTCCCGCGCCGCCCGCAAACGTTCGGATTCCGCACCCGGTGCACAAGCTTTCGCAAGTGAGCAAACAAGAATCTCCTTTATCACGCCAACGTGGCGATGGAAAAGATTGTACTCCAAAGAAGCAGAAGCAGTGCAACTGTAAAAACTCTCGGTGCCTGAAGTTGTACTGTGAGTGCTTTACAGCTGGAATTTATTGTGAAGGTTGCAACTGCTCGAATTGTCACAATAATGTGGACAATGAAGCTGCTAGGCAGGACGCACGTGGAGCAATTTTAGAGCGTAATCCAAATGCCTTCCAACCAAAGATTGCTAGCAGCCCACAAGAATCTCGTGATGGTAGGGAAGATGCTGGGGAAATTCAAGCAGCTGGAAGGCACAACAAAGGATGCCACTGTAAGAAATCAGGCTGCCTCAAGAAGTATTGTGAGTGCTTCCAAGCCAATATTCTATGCTCTGAAAATTGTAAATGCATGGACTGCAAGAACTTTGAAGGAAGCGAAGAGAGAAGAGCTCTCTATCATGAAGGCCAGAATACTGTGGCCTACATGCAACAGGCCAATGCAGCCATTAGTGGGGCCATTGGAACCTCTGGTTACGGGACCCCTCTTGTGTCCAGAAAAAGAAAAGGCTATGAACTTTATTTTACCACTGGAAATCAATCCACTCATCCGATTGCACAATCTCAACAGGAAAATCATCTAAGACCTCCTATGACCTCTTCTTCTCAGTTGTCTGTTCCTATCTTTCACGCTGCTAATGCAGCAGTATCAAGACCTTCAAAAACAACTATATACAGATCTCCATTGATGGACATCATCCAACCAAAAAACGTAAAGGATCTGTGCTCACGTTTGGTTGTAGTTGCAGGGGCAGCTGCAAGGGCACTTGCAGGAAATAGGCAAAGAGAGACAATTCATAAGACTAATGCCACTTCATCCACTCAAGAGGGGAATAAACATAAAACGGAACATGATAAGCAGCATGATGACCATGACCTTATAGGAGTGAATCAAGCAGATAGAGACGCGAGTAGATTTTCTGGATCGAATGGAGGTGATGTGCAAGATAGTAGGCCAATGTCACCTGGAACTCTTGCCCTGATGTGTGATGAACAAGATAAGATGTTTATGGAAGCTGGATTGCCAAATGGTGCTCGAACCGATAATCCAAGCATGCCTCAGAAGTTAACTCAGGATATAGGTTTCACAGAGGTTTACGTGGAACAGGAAAGGCTTGTTCTGACAGGGTTCAGAGATTGCCTTAACCATCTTATTACGCGGGGGAGCATAAAAGAAACAATGTGTTCTCCCCAAGCCAAAAGGGAGAGGGTAAGCCAGAAAGAATCCGTACAGGTTGGAACAGCAAAACCTACCACTGAACCCAGGTACCAGAAAGAGGCCTACAGCAACGACATTGTGAAATCTCCTCTTTCATCAGCAAACGGGTTGGAAGCCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

577

Amino Acids

63.24

Weight (kDa)

8.79

Isoelectric Point (pI)

59.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	132 - 167	5.2e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	218 - 252	2.2e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009660)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35890 FvH4_2g35890 FvH4_2g35890 FvH4_2g35890
malus_domestica	MD08G1116500.v1.1 MD15G1096100.v1.1
prunus_persica	Prupe.1G451000_v2.0.a1 Prupe.1G451000_v2.0.a1
pyrus_communis	pycom08g09710 pycom15g08830
rosa_chinensis	RchiOBHm_Chr6g0305931
rosa_laevigata	RLG00000010845
rosa_multiflora	Rmu_sc0001809.1_g000050 Rmu_sc0039000.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162210
rosa_rugosa	Rorug06G0345400
rosa_samantha	Rh6AG457000 Rh6AG457100 Rh6BG444300 Rh6CG470900 Rh6DG457600
rosa_wichuraiana	Rw6G039870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1656
AccB1I	GGYRCC	3 cut(s)	97, 423, 1656
AccII	CGCG	4 cut(s)	32, 278, 1298, 1549
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	2 cut(s)	1116, 1321
AcoI	YGGCCR	1 cut(s)	266
AcsI	RAATTY	2 cut(s)	459, 627
AcuI	CTGAAG	2 cut(s)	104, 449
AcvI	CACGTG	1 cut(s)	533
AdeI	CACNNNGTG	1 cut(s)	310
AfaI	GTAC	5 cut(s)	108, 382, 437, 1620, 1658
AfiI	CCNNNNNNNGG	2 cut(s)	843, 1666
AgsI	TTSAA	3 cut(s)	632, 761, 1050
AhdI	GACNNNNNGTC	1 cut(s)	72
AjnI	CCWGG	3 cut(s)	1354, 1652, 1724
AjuI	GAANNNNNNNTTGG	2 cut(s)	699, 731
AloI	GAACNNNNNNTCC	2 cut(s)	1420, 1452
AluBI	AGCT	9 cut(s)	112, 118, 319, 455, 515, 638, 782, 1145, 1406
AluI	AGCT	9 cut(s)	112, 118, 319, 455, 515, 638, 782, 1145, 1406
Alw21I	GWGCWC	4 cut(s)	315, 784, 1118, 1426
Alw26I	GTCTC	3 cut(s)	25, 1172, 1287
Alw44I	GTGCAC	1 cut(s)	311
AlwI	GGATC	2 cut(s)	1116, 1321
AoxI	GGCC	7 cut(s)	266, 796, 810, 825, 846, 1343, 1668
ApaLI	GTGCAC	1 cut(s)	311
ApoI	RAATTY	2 cut(s)	459, 627
Asp718I	GGTACC	1 cut(s)	1656
AspLEI	GCGC	3 cut(s)	34, 139, 280
AspS9I	GGNCC	3 cut(s)	211, 846, 870
AsuC2I	CCSGG	1 cut(s)	308
AsuHPI	GGTGA	3 cut(s)	150, 1337, 1344
AsuNHI	GCTAGC	1 cut(s)	581
AvaII	GGWCC	2 cut(s)	211, 870
BaeGI	GKGCMC	2 cut(s)	315, 1156
BaeI	ACNNNNGTAYC	2 cut(s)	1640, 1673
BanI	GGYRCC	3 cut(s)	97, 423, 1656
BanII	GRGCYC	1 cut(s)	784
BauI	CACGAG	1 cut(s)	600
BbrPI	CACGTG	1 cut(s)	533
Bbv12I	GWGCWC	4 cut(s)	315, 784, 1118, 1426
BccI	CCATC	4 cut(s)	362, 599, 1072, 1545
BciT130I	CCWGG	3 cut(s)	1356, 1654, 1726
BcnI	CCSGG	1 cut(s)	308
BcoDI	GTCTC	3 cut(s)	25, 1172, 1287
BfaI	CTAG	2 cut(s)	519, 582
BfmI	CTRYAG	2 cut(s)	113, 1672
BglI	GCCNNNNNGGC	1 cut(s)	363
BglII	AGATCT	1 cut(s)	1067
Bme1390I	CCNGG	4 cut(s)	308, 1356, 1654, 1726
Bme18I	GGWCC	2 cut(s)	211, 870
BmeRI	GACNNNNNGTC	1 cut(s)	72
BmgT120I	GGNCC	3 cut(s)	211, 846, 870
BmiI	GGNNCC	7 cut(s)	99, 425, 847, 856, 871, 872, 1658
BmrFI	CCNGG	4 cut(s)	308, 1356, 1654, 1726
BmsI	GCATC	2 cut(s)	607, 647
BmtI	GCTAGC	1 cut(s)	585
BplI	GAGNNNNNCTC	2 cut(s)	766, 798
BpuEI	CTTGAG	2 cut(s)	668, 1197
BpuMI	CCSGG	1 cut(s)	308
BsaAI	YACGTR	2 cut(s)	533, 1489
BsaBI	GATNNNNATC	1 cut(s)	1082
BsaI	GGTCTC	1 cut(s)	25
BsaJI	CCNNGG	1 cut(s)	1652
BsaXI	ACNNNNNCTCC	2 cut(s)	1314, 1344
Bsc4I	CCNNNNNNNGG	2 cut(s)	843, 1666
Bse118I	RCCGGY	3 cut(s)	160, 202, 241
Bse1I	ACTGG	1 cut(s)	925
Bse8I	GATNNNNATC	1 cut(s)	1082
BseBI	CCWGG	3 cut(s)	1356, 1654, 1726
BseDI	CCNNGG	1 cut(s)	1652
BseGI	GGATG	4 cut(s)	662, 937, 1086, 1205
BseJI	GATNNNNATC	1 cut(s)	1082
BseLI	CCNNNNNNNGG	2 cut(s)	843, 1666
BseMII	CTCAG	3 cut(s)	1010, 1463, 1475
BseNI	ACTGG	1 cut(s)	925
BseRI	GAGGAG	1 cut(s)	1686
BseSI	GKGCMC	2 cut(s)	315, 1156
BseX3I	CGGCCG	1 cut(s)	266
BseYI	CCCAGC	1 cut(s)	620
Bsh1236I	CGCG	4 cut(s)	32, 278, 1298, 1549
Bsh1285I	CGRYCG	2 cut(s)	80, 269
BshFI	GGCC	7 cut(s)	268, 798, 812, 827, 848, 1345, 1670
BshNI	GGYRCC	3 cut(s)	97, 423, 1656
BsiEI	CGRYCG	2 cut(s)	80, 269
BsiHKAI	GWGCWC	4 cut(s)	315, 784, 1118, 1426
BsiSI	CCGG	5 cut(s)	101, 161, 203, 242, 308
BslFI	GGGAC	2 cut(s)	258, 883
BslI	CCNNNNNNNGG	2 cut(s)	843, 1666
BsmAI	GTCTC	3 cut(s)	25, 1172, 1287
BsmBI	CGTCTC	1 cut(s)	1287
BsmFI	GGGAC	2 cut(s)	258, 883
BsnI	GGCC	7 cut(s)	268, 798, 812, 827, 848, 1345, 1670
Bso31I	GGTCTC	1 cut(s)	25
Bsp1286I	GDGCHC	5 cut(s)	315, 784, 1118, 1156, 1426
Bsp143I	GATC	4 cut(s)	77, 1067, 1108, 1313
BspANI	GGCC	7 cut(s)	268, 798, 812, 827, 848, 1345, 1670
BspCNI	CTCAG	3 cut(s)	1009, 1462, 1474
BspFNI	CGCG	4 cut(s)	32, 278, 1298, 1549
BspHI	TCATGA	1 cut(s)	790
BspLI	GGNNCC	7 cut(s)	99, 425, 847, 856, 871, 872, 1658
BspOI	GCTAGC	1 cut(s)	585
BspPI	GGATC	2 cut(s)	1116, 1321
BspQI	GCTCTTC	1 cut(s)	772
BspT107I	GGYRCC	3 cut(s)	97, 423, 1656
BspTNI	GGTCTC	1 cut(s)	25
BsrFI	RCCGGY	3 cut(s)	160, 202, 241
BsrI	ACTGG	1 cut(s)	925
BssAI	RCCGGY	3 cut(s)	160, 202, 241
BssECI	CCNNGG	1 cut(s)	1652
BssMI	GATC	4 cut(s)	77, 1067, 1108, 1313
BssSI	CACGAG	1 cut(s)	600
Bst2BI	CACGAG	1 cut(s)	600
Bst2UI	CCWGG	3 cut(s)	1356, 1654, 1726
Bst4CI	ACNGT	8 cut(s)	19, 129, 174, 192, 410, 440, 665, 808
Bst6I	CTCTTC	3 cut(s)	765, 772, 994
BstAPI	GCANNNNNTGC	2 cut(s)	310, 747
BstBAI	YACGTR	2 cut(s)	533, 1489
BstC8I	GCNNGC	5 cut(s)	204, 243, 285, 583, 1445
BstDEI	CTNAG	4 cut(s)	971, 996, 1449, 1461
BstF5I	GGATG	4 cut(s)	662, 937, 1086, 1205
BstFNI	CGCG	4 cut(s)	32, 278, 1298, 1549
BstHHI	GCGC	3 cut(s)	34, 139, 280
BstKTI	GATC	4 cut(s)	80, 1070, 1111, 1316
BstMAI	GTCTC	3 cut(s)	25, 1172, 1287
BstMBI	GATC	4 cut(s)	77, 1067, 1108, 1313
BstMCI	CGRYCG	2 cut(s)	80, 269
BstNI	CCWGG	3 cut(s)	1356, 1654, 1726
BstNSI	RCATGY	2 cut(s)	820, 1447
BstSCI	CCNGG	4 cut(s)	306, 1354, 1652, 1724
BstSFI	CTRYAG	2 cut(s)	113, 1672
BstSLI	GKGCMC	2 cut(s)	315, 1156
BstUI	CGCG	4 cut(s)	32, 278, 1298, 1549
BstX2I	RGATCY	2 cut(s)	1067, 1108
BstXI	CCANNNNNNTGG	1 cut(s)	43
BstYI	RGATCY	2 cut(s)	1067, 1108
BstZI	CGGCCG	1 cut(s)	266
BsuRI	GGCC	7 cut(s)	268, 798, 812, 827, 848, 1345, 1670
BtgZI	GCGATG	1 cut(s)	381
BtsCI	GGATG	4 cut(s)	662, 937, 1086, 1205
BtsI	GCAGTG	1 cut(s)	407
BtsIMutI	CAGTG	5 cut(s)	138, 407, 661, 918, 1644
Cac8I	GCNNGC	5 cut(s)	204, 243, 285, 583, 1445
CciI	TCATGA	1 cut(s)	790
CfoI	GCGC	3 cut(s)	34, 139, 280
Cfr10I	RCCGGY	3 cut(s)	160, 202, 241
Cfr13I	GGNCC	3 cut(s)	211, 846, 870
CseI	GACGC	3 cut(s)	76, 536, 1304
Csp6I	GTAC	5 cut(s)	107, 381, 436, 1619, 1657
CviAII	CATG	7 cut(s)	742, 791, 817, 1241, 1253, 1262, 1444
CviQI	GTAC	5 cut(s)	107, 381, 436, 1619, 1657
DdeI	CTNAG	4 cut(s)	971, 996, 1449, 1461
DpnI	GATC	4 cut(s)	79, 1069, 1110, 1315
DpnII	GATC	4 cut(s)	77, 1067, 1108, 1313
DraIII	CACNNNGTG	1 cut(s)	310
DriI	GACNNNNNGTC	1 cut(s)	72
EaeI	YGGCCR	1 cut(s)	266
EagI	CGGCCG	1 cut(s)	266
Eam1104I	CTCTTC	3 cut(s)	765, 772, 994
Eam1105I	GACNNNNNGTC	1 cut(s)	72
EarI	CTCTTC	3 cut(s)	765, 772, 994
Ecl136II	GAGCTC	1 cut(s)	782
EclXI	CGGCCG	1 cut(s)	266
Eco147I	AGGCCT	1 cut(s)	1670
Eco24I	GRGCYC	1 cut(s)	784
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	2 cut(s)	211, 870
Eco52I	CGGCCG	1 cut(s)	266
Eco53kI	GAGCTC	1 cut(s)	782
Eco57I	CTGAAG	2 cut(s)	104, 449
Eco72I	CACGTG	1 cut(s)	533
EcoICRI	GAGCTC	1 cut(s)	782
EcoO109I	RGGNCCY	1 cut(s)	870
EcoRII	CCWGG	3 cut(s)	1354, 1652, 1724
EcoT22I	ATGCAT	1 cut(s)	743
EcoT38I	GRGCYC	1 cut(s)	784
Esp3I	CGTCTC	1 cut(s)	1287
FaeI	CATG	7 cut(s)	745, 794, 820, 1244, 1256, 1265, 1447
FaqI	GGGAC	2 cut(s)	258, 883
FatI	CATG	7 cut(s)	741, 790, 816, 1240, 1252, 1261, 1443
FauI	CCCGC	3 cut(s)	283, 292, 1542
FokI	GGATG	4 cut(s)	669, 924, 1073, 1192
FriOI	GRGCYC	1 cut(s)	784
FspBI	CTAG	2 cut(s)	519, 582
GlaI	GCGC	3 cut(s)	33, 138, 279
GsaI	CCCAGC	1 cut(s)	624
HaeIII	GGCC	7 cut(s)	268, 798, 812, 827, 848, 1345, 1670
HapII	CCGG	5 cut(s)	101, 161, 203, 242, 308
HgaI	GACGC	3 cut(s)	76, 536, 1304
HhaI	GCGC	3 cut(s)	34, 139, 280
Hin1II	CATG	7 cut(s)	745, 794, 820, 1244, 1256, 1265, 1447
Hin6I	GCGC	3 cut(s)	32, 137, 278
HinP1I	GCGC	3 cut(s)	32, 137, 278
HincII	GTYRAC	1 cut(s)	1458
HindII	GTYRAC	1 cut(s)	1458
HindIII	AAGCTT	1 cut(s)	317
HinfI	GANTC	7 cut(s)	247, 271, 298, 341, 596, 1279, 1613
HpaI	GTTAAC	1 cut(s)	1458
HpaII	CCGG	5 cut(s)	101, 161, 203, 242, 308
HphI	GGTGA	3 cut(s)	150, 1337, 1344
Hpy166II	GTNNAC	4 cut(s)	313, 505, 1458, 1486
Hpy188I	TCNGA	8 cut(s)	25, 123, 297, 727, 942, 1452, 1512, 1523
Hpy188III	TCNNGA	9 cut(s)	64, 602, 685, 791, 885, 1041, 1214, 1311, 1463
Hpy8I	GTNNAC	4 cut(s)	313, 505, 1458, 1486
Hpy99I	CGWCG	1 cut(s)	70
HpyAV	CCTTC	6 cut(s)	464, 574, 636, 755, 788, 1056
HpyCH4III	ACNGT	8 cut(s)	19, 129, 174, 192, 410, 440, 665, 808
HpyCH4IV	ACGT	7 cut(s)	105, 291, 361, 532, 1101, 1120, 1488
HpyF3I	CTNAG	4 cut(s)	971, 996, 1449, 1461
HpySE526I	ACGT	7 cut(s)	105, 291, 361, 532, 1101, 1120, 1488
Hsp92II	CATG	7 cut(s)	745, 794, 820, 1244, 1256, 1265, 1447
HspAI	GCGC	3 cut(s)	32, 137, 278
KflI	GGGWCCC	1 cut(s)	870
KpnI	GGTACC	1 cut(s)	1660
KroI	GCCGGC	2 cut(s)	202, 241
KroNI	GCCGGC	2 cut(s)	204, 243
KspAI	GTTAAC	1 cut(s)	1458
Kzo9I	GATC	4 cut(s)	77, 1067, 1108, 1313
LguI	GCTCTTC	1 cut(s)	772
LmnI	GCTCC	3 cut(s)	4, 536, 1554
LweI	GCATC	2 cut(s)	607, 647
MaeI	CTAG	2 cut(s)	519, 582
MaeII	ACGT	7 cut(s)	105, 291, 361, 532, 1101, 1120, 1488
MaeIII	GTNAC	3 cut(s)	491, 863, 1350
MalI	GATC	4 cut(s)	79, 1069, 1110, 1315
MboI	GATC	4 cut(s)	77, 1067, 1108, 1313
MboII	GAAGA	5 cut(s)	626, 782, 789, 981, 984
MfeI	CAATTG	1 cut(s)	53
MflI	RGATCY	2 cut(s)	1067, 1108
MhlI	GDGCHC	5 cut(s)	315, 784, 1118, 1156, 1426
MluCI	AATT	9 cut(s)	41, 53, 227, 459, 487, 540, 627, 730, 1182
MlyI	GAGTC	1 cut(s)	280
MmeI	TCCRAC	4 cut(s)	592, 1114, 1606, 1698
Mph1103I	ATGCAT	1 cut(s)	743
MreI	CGCCGGCG	1 cut(s)	241
MroNI	GCCGGC	2 cut(s)	202, 241
MseI	TTAA	3 cut(s)	230, 1457, 1533
MslI	CAYNNNNRTG	1 cut(s)	498
MspA1I	CMGCKG	3 cut(s)	455, 638, 1145
MspI	CCGG	5 cut(s)	101, 161, 203, 242, 308
MspR9I	CCNGG	4 cut(s)	308, 1356, 1654, 1726
MunI	CAATTG	1 cut(s)	53
MvaI	CCWGG	3 cut(s)	1356, 1654, 1726
MvnI	CGCG	4 cut(s)	32, 278, 1298, 1549
NaeI	GCCGGC	2 cut(s)	204, 243
NciI	CCSGG	1 cut(s)	308
NdeII	GATC	4 cut(s)	77, 1067, 1108, 1313
NgoMIV	GCCGGC	2 cut(s)	202, 241
NheI	GCTAGC	1 cut(s)	581
NlaIII	CATG	7 cut(s)	745, 794, 820, 1244, 1256, 1265, 1447
NlaIV	GGNNCC	7 cut(s)	99, 425, 847, 856, 871, 872, 1658
NmeAIII	GCCGAG	2 cut(s)	244, 294
NmuCI	GTSAC	2 cut(s)	491, 1350
NsiI	ATGCAT	1 cut(s)	743
NspI	RCATGY	2 cut(s)	820, 1447
PaeI	GCATGC	1 cut(s)	1447
PagI	TCATGA	1 cut(s)	790
PceI	AGGCCT	1 cut(s)	1670
PciSI	GCTCTTC	1 cut(s)	772
PdiI	GCCGGC	2 cut(s)	204, 243
PfeI	GAWTC	6 cut(s)	247, 298, 341, 596, 1279, 1613
PflFI	GACNNNGTC	1 cut(s)	127
Ple19I	CGATCG	1 cut(s)	80
PleI	GAGTC	1 cut(s)	279
PmaCI	CACGTG	1 cut(s)	533
PmlI	CACGTG	1 cut(s)	533
PpsI	GAGTC	1 cut(s)	279
Ppu21I	YACGTR	2 cut(s)	533, 1489
PpuMI	RGGWCCY	1 cut(s)	870
Psp124BI	GAGCTC	1 cut(s)	784
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	870
Psp6I	CCWGG	3 cut(s)	1354, 1652, 1724
PspCI	CACGTG	1 cut(s)	533
PspFI	CCCAGC	1 cut(s)	620
PspGI	CCWGG	3 cut(s)	1354, 1652, 1724
PspN4I	GGNNCC	7 cut(s)	99, 425, 847, 856, 871, 872, 1658
PspPI	GGNCC	3 cut(s)	211, 846, 870
PspPPI	RGGWCCY	1 cut(s)	870
PsuI	RGATCY	2 cut(s)	1067, 1108
PsyI	GACNNNGTC	1 cut(s)	127
PvuI	CGATCG	1 cut(s)	80
PvuII	CAGCTG	3 cut(s)	455, 638, 1145
RsaI	GTAC	5 cut(s)	108, 382, 437, 1620, 1658
RsaNI	GTAC	5 cut(s)	107, 381, 436, 1619, 1657
RseI	CAYNNNNRTG	1 cut(s)	498
SacI	GAGCTC	1 cut(s)	784
SapI	GCTCTTC	1 cut(s)	772
SaqAI	TTAA	3 cut(s)	230, 1457, 1533
Sau3AI	GATC	4 cut(s)	77, 1067, 1108, 1313
Sau96I	GGNCC	3 cut(s)	211, 846, 870
SchI	GAGTC	1 cut(s)	280
ScrFI	CCNGG	4 cut(s)	308, 1356, 1654, 1726
SduI	GDGCHC	5 cut(s)	315, 784, 1118, 1156, 1426
SfaNI	GCATC	2 cut(s)	607, 647
SfcI	CTRYAG	2 cut(s)	113, 1672
SgrAI	CRCCGGYG	1 cut(s)	241
SinI	GGWCC	2 cut(s)	211, 870
SmiMI	CAYNNNNRTG	1 cut(s)	498
SmlI	CTYRAG	2 cut(s)	683, 1212
SmoI	CTYRAG	2 cut(s)	683, 1212
SphI	GCATGC	1 cut(s)	1447
Sse9I	AATT	9 cut(s)	41, 53, 227, 459, 487, 540, 627, 730, 1182
SseBI	AGGCCT	1 cut(s)	1670
SspI	AATATT	1 cut(s)	715
SspMI	CTAG	2 cut(s)	519, 582
SstI	GAGCTC	1 cut(s)	784
StuI	AGGCCT	1 cut(s)	1670
StyD4I	CCNGG	4 cut(s)	306, 1354, 1652, 1724
TaaI	ACNGT	8 cut(s)	19, 129, 174, 192, 410, 440, 665, 808
TaiI	ACGT	7 cut(s)	108, 294, 364, 535, 1104, 1123, 1491
TaqI	TCGA	4 cut(s)	76, 485, 1316, 1426
TasI	AATT	9 cut(s)	41, 53, 227, 459, 487, 540, 627, 730, 1182
TatI	WGTACW	2 cut(s)	380, 435
TauI	GCSGC	6 cut(s)	95, 199, 209, 238, 241, 283
TfiI	GAWTC	6 cut(s)	247, 298, 341, 596, 1279, 1613
Tru1I	TTAA	3 cut(s)	230, 1457, 1533
Tru9I	TTAA	3 cut(s)	230, 1457, 1533
TscAI	CASTG	5 cut(s)	138, 407, 668, 925, 1651
TseFI	GTSAC	2 cut(s)	491, 1350
Tsp45I	GTSAC	2 cut(s)	491, 1350
TspDTI	ATGAA	7 cut(s)	525, 807, 918, 1175, 1194, 1395, 1692
TspGWI	ACGGA	2 cut(s)	1250, 1606
TspRI	CASTG	5 cut(s)	138, 407, 668, 925, 1651
Tth111I	GACNNNGTC	1 cut(s)	127
VneI	GTGCAC	1 cut(s)	311
VpaK11BI	GGWCC	2 cut(s)	211, 870
XapI	RAATTY	2 cut(s)	459, 627
XceI	RCATGY	2 cut(s)	820, 1447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	365
XspI	CTAG	2 cut(s)	519, 582
Zsp2I	ATGCAT	1 cut(s)	743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.