Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009660

Physical Location & Seq

Genomic Coordinates Reverse (-)

63727057 .. 63732518

Gene Structure 5462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGAGCAGAGCGAAACGGTTTCCAGTACGGCGCCGAAGAAATTGGCCAGGCAATTGGATTTCACGGCGCCGGTTCAGCCGTCCGTTAACTCTGCGTTGCCGGAGCGGTCTGGACCGGCGGCGGTTCAAGTACAGTCGCAGCCACAGCAGCCGCATCTGCGGGCGCATCCACAGACGCAGCCGTGGTCACAGCCACAGCTACAGCTACAGTCACAGTCACAGTCACAGTCACAGCCACAGCAGCTGCATAACTCGCCGGCACAGTTGGCGTTACAGTCACAACAGCAGGGGACGGTGGCGCAATCGCCGAAGCCGTATCTGACGCAGGCGGTCTTGCACTTTCAGGCGAGGCCGGTGGGGCCGACGATGCCCGTGAACGGCCGGATTGCGCACTTGCCACCGAAATTGGGAAAACACGAGTCTCCTAAACCACGCGCACGCAGCGAAGCGAAAGAAAGTACTCCAAAGAAACAAAAGCTGTGCAATTGTAAAAATTCACGGTGCCTCAAGTTGTACTGTGAGTGCTTTGCAGCTGGAATTTATTGTAAAGGATGCAACTGCATAAATTGTCATAATAATGTGGACAACGAAGCTGCTAGGCAGGATGCTGTTGGAGCAATTTTAGAGCGTAACCCAAAAGCATTCAGACCAAAGATTGCTAGCAGTCCACATGAATCTCGCGATTCTTGGGAAGATGCTGGGGAGGTTCAAAAGCACCACAAAGGATGTGCTTGCAGGAAGTCTGGGTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAATGTTCTGTGTTCTGAAAACTGTAAATGCATGGACTGCAAGAACTTTGATGGAAGTGAAGAAAGAAGGGCTATCTTTCATGAAGATCACAATACGATAGCCAACATGCAACAGGCAAATGCCGCCATTAGTGGGGCCATTGGATCCTCTGGGTTTGGGCCTCTAGTGTCCAGACAAAGACCGAGCGATGAACTTTTTTCTGGCATTGCCAGAGATCAATCAGTTCACCGGATTACACAGGCTCAGCAGGAAAATCACTTAAGACCTCCTGTGGCCTCTTCTTCTCTGTTATCTGTTCCTACTTTTGGTACTCCTAATGCTGCAGTATCAGGATCTTCAAAACCCACATACAGATCTATGTTGGCAAATATCATCCAACCTGAGAACATAAAGGATCTGTGTTCACGTCTGGTTGTAGTTTCAGGAGAAGCTGCAAAGGCACTTGCAGAAAATAGGCAAAAAGAGATGATTGATAAGACTACCACCATCTCAGCCACTAGAGAGGGGAAAGAAAGTAAAAGGGAACAAGTTCAAAATCCTGCGCATGGTGACCGTTTGGGAATGAATCAAGCAGATAGAGATGGCAGCAGTGGTTCTGGATCAGATGGAGGCGATGTGCAAAATAGTAGGCCAATGTCCCCTGGAACACTTGCCCTGATGTGTGATGAACAAGATAAGATATTTATGGCAGCTGAGCTGCCAAATGGGATAACAACGAATAGTCAAAGCACAACTCAGAATCCATCTCAGGAAATAGGTTGCACGGAGGTTTATGAAGAGCAGGAAAGAGTTATCCTCACAGGATTCAGGGATTTCCTAAACCTGCTTATTACTCGTGGTAGTATAAAAGAAACAATGTGTTCTCCCATAGCCAAAAGGGAGAGGGAAATCCAAAAGGATTCTGTAGAGGGTGGAACCCCAAAGAAACCCAGGTGCGAGAAAGCAACATACAGCAATGACATTGGGAAATCTCCTGCTTCAACAAATGCTATCCAGTTTCTCATTGTGGCCCATATAGATCCTTGGAGTGATGAAGCGTACAAAAAATTGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

611

Amino Acids

66.83

Weight (kDa)

8.65

Isoelectric Point (pI)

59.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	159 - 193	2.6e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	241 - 275	2.5e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009660)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35890 FvH4_2g35890 FvH4_2g35890 FvH4_2g35890
malus_domestica	MD08G1116500.v1.1 MD15G1096100.v1.1
prunus_persica	Prupe.1G451000_v2.0.a1 Prupe.1G451000_v2.0.a1
pyrus_communis	pycom08g09710 pycom15g08830
rosa_chinensis	RchiOBHm_Chr6g0305931
rosa_laevigata	RLG00000010845
rosa_multiflora	Rmu_sc0001809.1_g000050 Rmu_sc0039000.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162210
rosa_rugosa	Rorug06G0345400
rosa_samantha	Rh6AG457000 Rh6AG457100 Rh6BG444300 Rh6CG470900 Rh6DG457600
rosa_wichuraiana	Rw6G039870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	390, 1323
Acc36I	ACCTGC	1 cut(s)	1611
AccB1I	GGYRCC	3 cut(s)	31, 67, 501
AccBSI	CCGCTC	1 cut(s)	106
AccII	CGCG	2 cut(s)	435, 681
AciI	CCGC	7 cut(s)	106, 119, 122, 152, 160, 329, 903
AclWI	GGATC	6 cut(s)	918, 931, 1120, 1182, 1387, 1793
AcoI	YGGCCR	2 cut(s)	45, 379
AcsI	RAATTY	2 cut(s)	493, 537
AcyI	GRCGYC	2 cut(s)	32, 68
AfaI	GTAC	7 cut(s)	28, 132, 460, 515, 761, 1090, 1820
AfiI	CCNNNNNNNGG	5 cut(s)	377, 407, 912, 1085, 1325
AflII	CTTAAG	1 cut(s)	1039
AgsI	TTSAA	5 cut(s)	128, 710, 1119, 1313, 1761
AjiI	CACGTC	1 cut(s)	1187
AjnI	CCWGG	3 cut(s)	47, 1420, 1709
AjuI	GAANNNNNNNTTGG	2 cut(s)	768, 800
AluBI	AGCT	9 cut(s)	199, 205, 244, 478, 533, 593, 1211, 1472, 1477
AluI	AGCT	9 cut(s)	199, 205, 244, 478, 533, 593, 1211, 1472, 1477
Alw26I	GTCTC	2 cut(s)	426, 755
AlwI	GGATC	6 cut(s)	918, 931, 1120, 1182, 1387, 1793
AlwNI	CAGNNNCTG	1 cut(s)	244
AoxI	GGCC	9 cut(s)	45, 350, 359, 379, 915, 938, 1053, 1409, 1788
ApoI	RAATTY	2 cut(s)	493, 537
Asp700I	GAANNNNTTC	1 cut(s)	1308
AspLEI	GCGC	7 cut(s)	34, 70, 166, 301, 391, 437, 1324
AspS9I	GGNCC	5 cut(s)	113, 359, 915, 938, 1789
AsuHPI	GGTGA	2 cut(s)	998, 1340
AsuNHI	GCTAGC	1 cut(s)	659
AvaII	GGWCC	1 cut(s)	113
BalI	TGGCCA	1 cut(s)	47
BamHI	GGATCC	1 cut(s)	923
BanI	GGYRCC	3 cut(s)	31, 67, 501
BauI	CACGAG	2 cut(s)	416, 1614
BccI	CCATC	5 cut(s)	824, 1274, 1355, 1379, 1531
BceAI	ACGGC	6 cut(s)	45, 64, 81, 166, 298, 394
BciT130I	CCWGG	3 cut(s)	49, 1422, 1711
BcoDI	GTCTC	2 cut(s)	426, 755
BfaI	CTAG	4 cut(s)	597, 660, 944, 1278
BfmI	CTRYAG	4 cut(s)	200, 206, 1101, 1683
BfoI	RGCGCY	2 cut(s)	35, 71
BfrI	CTTAAG	1 cut(s)	1039
BfuAI	ACCTGC	1 cut(s)	1611
BglI	GCCNNNNNGGC	1 cut(s)	358
BglII	AGATCT	1 cut(s)	1133
BlpI	GCTNAGC	2 cut(s)	1023, 1473
BmcAI	AGTACT	2 cut(s)	460, 761
Bme1390I	CCNGG	3 cut(s)	49, 1422, 1711
Bme18I	GGWCC	1 cut(s)	113
BmgBI	CACGTC	1 cut(s)	1187
BmgT120I	GGNCC	5 cut(s)	113, 359, 915, 938, 1789
BmiI	GGNNCC	7 cut(s)	33, 69, 360, 503, 916, 925, 1696
BmrFI	CCNGG	3 cut(s)	49, 1422, 1711
BmsI	GCATC	6 cut(s)	163, 175, 357, 542, 595, 685
BmtI	GCTAGC	1 cut(s)	663
BplI	GAGNNNNNCTC	2 cut(s)	1560, 1592
Bpu1102I	GCTNAGC	2 cut(s)	1023, 1473
BpuEI	CTTGAG	2 cut(s)	491, 737
BsaHI	GRCGYC	2 cut(s)	32, 68
BsaJI	CCNNGG	4 cut(s)	182, 1420, 1709, 1802
BsaWI	WCCGGW	1 cut(s)	1008
BsaXI	ACNNNNNCTCC	2 cut(s)	1380, 1410
Bsc4I	CCNNNNNNNGG	5 cut(s)	377, 407, 912, 1085, 1325
Bse118I	RCCGGY	4 cut(s)	70, 115, 256, 352
Bse1I	ACTGG	2 cut(s)	24, 1774
Bse3DI	GCAATG	2 cut(s)	984, 1741
BseBI	CCWGG	3 cut(s)	49, 1422, 1711
BseDI	CCNNGG	4 cut(s)	182, 1420, 1709, 1802
BseGI	GGATG	5 cut(s)	166, 557, 610, 731, 1152
BseLI	CCNNNNNNNGG	5 cut(s)	377, 407, 912, 1085, 1325
BseMI	GCAATG	2 cut(s)	984, 1741
BseMII	CTCAG	6 cut(s)	1037, 1152, 1284, 1464, 1529, 1541
BseNI	ACTGG	2 cut(s)	24, 1774
BseX3I	CGGCCG	1 cut(s)	379
BseYI	CCCAGC	1 cut(s)	698
Bsh1236I	CGCG	2 cut(s)	435, 681
Bsh1285I	CGRYCG	1 cut(s)	382
BshFI	GGCC	9 cut(s)	47, 352, 361, 381, 917, 940, 1055, 1411, 1790
BshNI	GGYRCC	3 cut(s)	31, 67, 501
BsiEI	CGRYCG	1 cut(s)	382
BsiSI	CCGG	7 cut(s)	71, 101, 116, 257, 353, 382, 1009
BslFI	GGGAC	2 cut(s)	304, 1402
BslI	CCNNNNNNNGG	5 cut(s)	377, 407, 912, 1085, 1325
BsmAI	GTCTC	2 cut(s)	426, 755
BsmFI	GGGAC	2 cut(s)	304, 1402
BsmI	GAATGC	1 cut(s)	641
BsnI	GGCC	9 cut(s)	47, 352, 361, 381, 917, 940, 1055, 1411, 1790
Bsp143I	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
Bsp1720I	GCTNAGC	2 cut(s)	1023, 1473
Bsp68I	TCGCGA	1 cut(s)	681
BspACI	CCGC	7 cut(s)	106, 119, 122, 152, 160, 329, 903
BspANI	GGCC	9 cut(s)	47, 352, 361, 381, 917, 940, 1055, 1411, 1790
BspCNI	CTCAG	6 cut(s)	1036, 1153, 1283, 1465, 1528, 1540
BspFNI	CGCG	2 cut(s)	435, 681
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	7 cut(s)	33, 69, 360, 503, 916, 925, 1696
BspMAI	CTGCAG	1 cut(s)	1105
BspMI	ACCTGC	1 cut(s)	1611
BspOI	GCTAGC	1 cut(s)	663
BspPI	GGATC	6 cut(s)	918, 931, 1120, 1182, 1387, 1793
BspQI	GCTCTTC	1 cut(s)	1551
BspT107I	GGYRCC	3 cut(s)	31, 67, 501
BspTI	CTTAAG	1 cut(s)	1039
BsrBI	CCGCTC	1 cut(s)	106
BsrDI	GCAATG	2 cut(s)	984, 1741
BsrFI	RCCGGY	4 cut(s)	70, 115, 256, 352
BsrI	ACTGG	2 cut(s)	24, 1774
BssAI	RCCGGY	4 cut(s)	70, 115, 256, 352
BssECI	CCNNGG	4 cut(s)	182, 1420, 1709, 1802
BssMI	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
BssNI	GRCGYC	2 cut(s)	32, 68
BssSI	CACGAG	2 cut(s)	416, 1614
BssT1I	CCWWGG	1 cut(s)	1802
Bst2BI	CACGAG	2 cut(s)	416, 1614
Bst2UI	CCWGG	3 cut(s)	49, 1422, 1711
Bst6I	CTCTTC	2 cut(s)	1063, 1551
BstACI	GRCGYC	2 cut(s)	32, 68
BstAFI	CTTAAG	1 cut(s)	1039
BstAPI	GCANNNNNTGC	1 cut(s)	816
BstC8I	GCNNGC	6 cut(s)	162, 258, 327, 439, 661, 733
BstDEI	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
BstDSI	CCRYGG	1 cut(s)	182
BstEII	GGTNACC	1 cut(s)	1328
BstF5I	GGATG	5 cut(s)	166, 557, 610, 731, 1152
BstFNI	CGCG	2 cut(s)	435, 681
BstH2I	RGCGCY	2 cut(s)	35, 71
BstHHI	GCGC	7 cut(s)	34, 70, 166, 301, 391, 437, 1324
BstKTI	GATC	8 cut(s)	868, 926, 997, 1115, 1136, 1177, 1382, 1801
BstMAI	GTCTC	2 cut(s)	426, 755
BstMBI	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
BstMCI	CGRYCG	1 cut(s)	382
BstNI	CCWGG	3 cut(s)	49, 1422, 1711
BstNSI	RCATGY	1 cut(s)	889
BstPI	GGTNACC	1 cut(s)	1328
BstSCI	CCNGG	3 cut(s)	47, 1420, 1709
BstSFI	CTRYAG	4 cut(s)	200, 206, 1101, 1683
BstUI	CGCG	2 cut(s)	435, 681
BstX2I	RGATCY	5 cut(s)	923, 1112, 1133, 1174, 1798
BstXI	CCANNNNNNTGG	1 cut(s)	55
BstYI	RGATCY	5 cut(s)	923, 1112, 1133, 1174, 1798
BstZI	CGGCCG	1 cut(s)	379
BsuRI	GGCC	9 cut(s)	47, 352, 361, 381, 917, 940, 1055, 1411, 1790
BtgI	CCRYGG	1 cut(s)	182
BtgZI	GCGATG	2 cut(s)	981, 1407
BtrI	CACGTC	1 cut(s)	1187
BtsCI	GGATG	5 cut(s)	166, 557, 610, 731, 1152
BtsI	GCAGTG	1 cut(s)	1375
BtsIMutI	CAGTG	1 cut(s)	1375
BtuMI	TCGCGA	1 cut(s)	681
BveI	ACCTGC	1 cut(s)	1611
Cac8I	GCNNGC	6 cut(s)	162, 258, 327, 439, 661, 733
CaiI	CAGNNNCTG	1 cut(s)	244
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	7 cut(s)	34, 70, 166, 301, 391, 437, 1324
Cfr10I	RCCGGY	4 cut(s)	70, 115, 256, 352
Cfr13I	GGNCC	5 cut(s)	113, 359, 915, 938, 1789
CseI	GACGC	2 cut(s)	184, 331
Csp6I	GTAC	7 cut(s)	27, 131, 459, 514, 760, 1089, 1819
CspCI	CAANNNNNGTGG	2 cut(s)	387, 422
CviAII	CATG	5 cut(s)	671, 811, 860, 886, 1325
CviQI	GTAC	7 cut(s)	27, 131, 459, 514, 760, 1089, 1819
DdeI	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
DinI	GGCGCC	2 cut(s)	33, 69
DpnI	GATC	8 cut(s)	867, 925, 996, 1114, 1135, 1176, 1381, 1800
DpnII	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
EaeI	YGGCCR	2 cut(s)	45, 379
EagI	CGGCCG	1 cut(s)	379
Eam1104I	CTCTTC	2 cut(s)	1063, 1551
EarI	CTCTTC	2 cut(s)	1063, 1551
EclXI	CGGCCG	1 cut(s)	379
Eco130I	CCWWGG	1 cut(s)	1802
Eco47I	GGWCC	1 cut(s)	113
Eco52I	CGGCCG	1 cut(s)	379
Eco91I	GGTNACC	1 cut(s)	1328
EcoO65I	GGTNACC	1 cut(s)	1328
EcoRII	CCWGG	3 cut(s)	47, 1420, 1709
EcoT14I	CCWWGG	1 cut(s)	1802
EcoT22I	ATGCAT	1 cut(s)	812
EgeI	GGCGCC	2 cut(s)	33, 69
EheI	GGCGCC	2 cut(s)	33, 69
ErhI	CCWWGG	1 cut(s)	1802
FaeI	CATG	5 cut(s)	674, 814, 863, 889, 1328
FaqI	GGGAC	2 cut(s)	304, 1402
FatI	CATG	5 cut(s)	670, 810, 859, 885, 1324
FauI	CCCGC	1 cut(s)	153
FokI	GGATG	5 cut(s)	153, 564, 617, 738, 1139
FspBI	CTAG	4 cut(s)	597, 660, 944, 1278
FspI	TGCGCA	2 cut(s)	390, 1323
GlaI	GCGC	7 cut(s)	33, 69, 165, 300, 390, 436, 1323
GsaI	CCCAGC	1 cut(s)	702
HaeII	RGCGCY	2 cut(s)	35, 71
HaeIII	GGCC	9 cut(s)	47, 352, 361, 381, 917, 940, 1055, 1411, 1790
HapII	CCGG	7 cut(s)	71, 101, 116, 257, 353, 382, 1009
HgaI	GACGC	2 cut(s)	184, 331
HhaI	GCGC	7 cut(s)	34, 70, 166, 301, 391, 437, 1324
Hin1I	GRCGYC	2 cut(s)	32, 68
Hin1II	CATG	5 cut(s)	674, 814, 863, 889, 1328
Hin6I	GCGC	7 cut(s)	32, 68, 164, 299, 389, 435, 1322
HinP1I	GCGC	7 cut(s)	32, 68, 164, 299, 389, 435, 1322
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HinfI	GANTC	7 cut(s)	419, 674, 683, 1345, 1519, 1584, 1679
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	7 cut(s)	71, 101, 116, 257, 353, 382, 1009
HphI	GGTGA	2 cut(s)	998, 1340
Hpy166II	GTNNAC	6 cut(s)	88, 376, 583, 668, 1006, 1184
Hpy188I	TCNGA	5 cut(s)	321, 647, 796, 1384, 1518
Hpy188III	TCNNGA	9 cut(s)	111, 680, 754, 860, 951, 1110, 1203, 1377, 1529
Hpy8I	GTNNAC	6 cut(s)	88, 376, 583, 668, 1006, 1184
Hpy99I	CGWCG	1 cut(s)	367
HpyAV	CCTTC	1 cut(s)	840
HpyCH4IV	ACGT	1 cut(s)	1186
HpyF3I	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
HpySE526I	ACGT	1 cut(s)	1186
Hsp92I	GRCGYC	2 cut(s)	32, 68
Hsp92II	CATG	5 cut(s)	674, 814, 863, 889, 1328
HspAI	GCGC	7 cut(s)	32, 68, 164, 299, 389, 435, 1322
KasI	GGCGCC	2 cut(s)	31, 67
KroI	GCCGGC	1 cut(s)	256
KroNI	GCCGGC	1 cut(s)	258
KspAI	GTTAAC	1 cut(s)	88
Kzo9I	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
LguI	GCTCTTC	1 cut(s)	1551
LmnI	GCTCC	3 cut(s)	4, 103, 614
LweI	GCATC	6 cut(s)	163, 175, 357, 542, 595, 685
MaeI	CTAG	4 cut(s)	597, 660, 944, 1278
MaeII	ACGT	1 cut(s)	1186
MaeIII	GTNAC	9 cut(s)	186, 210, 216, 222, 228, 270, 276, 629, 1328
MalI	GATC	8 cut(s)	867, 925, 996, 1114, 1135, 1176, 1381, 1800
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
MboII	GAAGA	8 cut(s)	49, 704, 851, 875, 1050, 1053, 1107, 1568
MfeI	CAATTG	2 cut(s)	53, 484
MflI	RGATCY	5 cut(s)	923, 1112, 1133, 1174, 1798
MlsI	TGGCCA	1 cut(s)	47
MluCI	AATT	9 cut(s)	41, 53, 404, 484, 493, 537, 565, 618, 1826
MluNI	TGGCCA	1 cut(s)	47
Mly113I	GGCGCC	2 cut(s)	32, 68
MlyI	GAGTC	1 cut(s)	428
MmeI	TCCRAC	2 cut(s)	592, 1180
Mox20I	TGGCCA	1 cut(s)	47
Mph1103I	ATGCAT	1 cut(s)	812
MroNI	GCCGGC	1 cut(s)	256
MroXI	GAANNNNTTC	1 cut(s)	1308
MscI	TGGCCA	1 cut(s)	47
MseI	TTAA	2 cut(s)	87, 1040
MslI	CAYNNNNRTG	1 cut(s)	576
Msp20I	TGGCCA	1 cut(s)	47
MspA1I	CMGCKG	3 cut(s)	244, 533, 1472
MspCI	CTTAAG	1 cut(s)	1039
MspI	CCGG	7 cut(s)	71, 101, 116, 257, 353, 382, 1009
MspR9I	CCNGG	3 cut(s)	49, 1422, 1711
MunI	CAATTG	2 cut(s)	53, 484
Mva1269I	GAATGC	1 cut(s)	641
MvaI	CCWGG	3 cut(s)	49, 1422, 1711
MvnI	CGCG	2 cut(s)	435, 681
NaeI	GCCGGC	1 cut(s)	258
NarI	GGCGCC	2 cut(s)	32, 68
NdeII	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
NgoMIV	GCCGGC	1 cut(s)	256
NheI	GCTAGC	1 cut(s)	659
NlaIII	CATG	5 cut(s)	674, 814, 863, 889, 1328
NlaIV	GGNNCC	7 cut(s)	33, 69, 360, 503, 916, 925, 1696
NmuCI	GTSAC	7 cut(s)	186, 210, 216, 222, 228, 276, 1328
NruI	TCGCGA	1 cut(s)	681
NsbI	TGCGCA	2 cut(s)	390, 1323
NsiI	ATGCAT	1 cut(s)	812
NspI	RCATGY	1 cut(s)	889
PagI	TCATGA	1 cut(s)	859
PciSI	GCTCTTC	1 cut(s)	1551
PcsI	WCGNNNNNNNCGW	1 cut(s)	311
PctI	GAATGC	1 cut(s)	641
PdiI	GCCGGC	1 cut(s)	258
PdmI	GAANNNNTTC	1 cut(s)	1308
PfeI	GAWTC	6 cut(s)	674, 683, 1345, 1519, 1584, 1679
PleI	GAGTC	1 cut(s)	427
PluTI	GGCGCC	2 cut(s)	35, 71
PpsI	GAGTC	1 cut(s)	427
Psp6I	CCWGG	3 cut(s)	47, 1420, 1709
PspEI	GGTNACC	1 cut(s)	1328
PspFI	CCCAGC	1 cut(s)	698
PspGI	CCWGG	3 cut(s)	47, 1420, 1709
PspN4I	GGNNCC	7 cut(s)	33, 69, 360, 503, 916, 925, 1696
PspPI	GGNCC	5 cut(s)	113, 359, 915, 938, 1789
PstI	CTGCAG	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	244
PsuI	RGATCY	5 cut(s)	923, 1112, 1133, 1174, 1798
PvuII	CAGCTG	3 cut(s)	244, 533, 1472
RruI	TCGCGA	1 cut(s)	681
RsaI	GTAC	7 cut(s)	28, 132, 460, 515, 761, 1090, 1820
RsaNI	GTAC	7 cut(s)	27, 131, 459, 514, 760, 1089, 1819
RseI	CAYNNNNRTG	1 cut(s)	576
SapI	GCTCTTC	1 cut(s)	1551
SaqAI	TTAA	2 cut(s)	87, 1040
Sau3AI	GATC	8 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379, 1798
Sau96I	GGNCC	5 cut(s)	113, 359, 915, 938, 1789
ScaI	AGTACT	2 cut(s)	460, 761
SchI	GAGTC	1 cut(s)	428
ScrFI	CCNGG	3 cut(s)	49, 1422, 1711
SfaNI	GCATC	6 cut(s)	163, 175, 357, 542, 595, 685
SfcI	CTRYAG	4 cut(s)	200, 206, 1101, 1683
SfiI	GGCCNNNNNGGCC	1 cut(s)	358
SfoI	GGCGCC	2 cut(s)	33, 69
SinI	GGWCC	1 cut(s)	113
SmiMI	CAYNNNNRTG	1 cut(s)	576
SmlI	CTYRAG	3 cut(s)	506, 752, 1039
SmoI	CTYRAG	3 cut(s)	506, 752, 1039
Sse9I	AATT	9 cut(s)	41, 53, 404, 484, 493, 537, 565, 618, 1826
SsiI	CCGC	7 cut(s)	106, 119, 122, 152, 160, 329, 903
SspDI	GGCGCC	2 cut(s)	31, 67
SspMI	CTAG	4 cut(s)	597, 660, 944, 1278
StyD4I	CCNGG	3 cut(s)	47, 1420, 1709
StyI	CCWWGG	1 cut(s)	1802
TaiI	ACGT	1 cut(s)	1189
TaqII	GACCGA	1 cut(s)	976
TasI	AATT	9 cut(s)	41, 53, 404, 484, 493, 537, 565, 618, 1826
TatI	WGTACW	4 cut(s)	130, 458, 513, 759
TauI	GCSGC	3 cut(s)	122, 154, 905
TfiI	GAWTC	6 cut(s)	674, 683, 1345, 1519, 1584, 1679
Tru1I	TTAA	2 cut(s)	87, 1040
Tru9I	TTAA	2 cut(s)	87, 1040
TscAI	CASTG	1 cut(s)	1375
TseFI	GTSAC	7 cut(s)	186, 210, 216, 222, 228, 276, 1328
Tsp45I	GTSAC	7 cut(s)	186, 210, 216, 222, 228, 276, 1328
TspDTI	ATGAA	8 cut(s)	687, 848, 876, 984, 1358, 1461, 1569, 1827
TspGWI	ACGGA	2 cut(s)	73, 1559
TspRI	CASTG	1 cut(s)	1375
Vha464I	CTTAAG	1 cut(s)	1039
VpaK11BI	GGWCC	1 cut(s)	113
XapI	RAATTY	2 cut(s)	493, 537
XceI	RCATGY	1 cut(s)	889
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	4 cut(s)	597, 660, 944, 1278
ZrmI	AGTACT	2 cut(s)	460, 761
Zsp2I	ATGCAT	1 cut(s)	812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.