Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009660

Physical Location & Seq

Genomic Coordinates Forward (+)

4825216 .. 4830568

Gene Structure 5353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00162210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGAGCAGAGCGAAACGGTTTCCGGTACCGCGCCGAAGAAATTGGCGAGGCAATTGGATTTCACGGCGCCGGTTCAGCCGTCCGTTAACTCTGCGTTGCCGGAGCTGTCTGGACCGGCGGCGGTTCAAGTACAGTCGCAGCCACAGCCGCATCTGCGGGCGCATCCACAGACGCAGCCGTGGTCACAGCCACAGCTACAGTCACAGTCACAGCCACAGCAGCTGCATAACTCGCCGGCACAGTTGGCGTTACAGTCACAACAGCAGGGGACGGTGGCGCAATCGCCGAAGCCGTATCTGACGCAGGCGGTCTTGCACTTTCAGGCGAGGCCGGTGGGGCCGACGATGCCCGTGAACGGCCGGATTGCGCACTTGCCACCGAAATTGGGAAAACACGAGTCTCCTAAACCACGCGCACGCAGCGAAGCGAAAGAAAGTACTCCAAAGAAACAAAAGCTGTGCAATTGTAAAAATTCACGGTGCCTCAAGTTGTACTGTGAGTGCTTTGCAGCTGGAATTTATTGTAAAGGATGCAACTGCATAAATTGTCATAATAATGTGGACAATGAAGCTGCTAGGCAGGATGCAGTTGGAGCAATTTTAGAGCGTAACCCAAAAGCGTTCAGACCAAAGATTGCTAGCAGTCCACATGAATCTCGTGATTCTTGGGAAGATGCTGGGGAGGTTCAAAAGCACCACAAAGGATGTGCTTGCAGGAAGTCTGGGTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAATGTTCTGTGTTCTGAAAACTGTAAATGCATGGACTGCAAGAACTTTGATGGAAGTGAAGAAAGAAGGGCTATCTTTCATGAAGATCACAATACGATAGCCAACATGCAACAGGCAAATGCTGCCATTAGTGGGGCCATTGGATCCTCTGGGTTTGGGCCTCTGGTGTCCAGACAAAGACCGAGCGATGAACTTTTTTGTGGCATTGGAGCCAGAGATCAATCAGTTCACCGGATTACACAGGCTCAGCAGGAAAATCACTTAAGACCTCCTATGGCCTCTTCTTCTCTGTTATCTGTTCCTACTTTTGGTACTCCTAATGCTGCAGTATCAGGATCTTCAAAACCCACATACAGATCTATGTTGGCAAATATCATCCAACCTGAGAACATAAAGGATCTGTGTTCACGTCTGGTTGTAGTTTCAGGAGAAGCTGCAAAGGCACTTGCAGAAAATAGGCAAAAAGAGATGATTGATAAGACTACTACCATCTCAGCCACTCGAGAGGGGAAAGAAAGTAAAAGGGAACAAGATCAAAATTCTGCGCATGGTAACCGTTTGGGAATGAATCAAGCAGATAGAGATGGCAGCAGTGGTTCTGGATCAGATGGAGGCGATGTGCAAAATAGTAGGCCAATGTCCCCTGGAACACTTGCCCTGATGTGTGATGAACAAGATAAGATGTTTATGGCAGCTGAGCTGCCAAATGGGATAACAACGAATAGTCCAAGCACAACTCAGAATCCATCTCAGGAAATAGGTTGCACGGAGGTTTATGAAGAGCAAGAAAGAGTTGTCCTCACAGGATTCAGGGATTTCCTAAACCTGCTTATTACTCGTGGTAGTATAAAAGAAACAATGTGTTCTCCCATAGCCAAAAGGGAGAGGGAAATCCAAAAGGATTCTGTAGAGGGTGGAACCCCAAAGAAACCCAGGAGCGAGAAAGCAACATACAGCAATGACATTGGGAAATCTCCTGCTTCAACAAATGGTAAAGTGCTTCAGTCAGTAGTCACTTATGTCTCTGAAGTTGGATTGCCCTTGAAAAATAATACTGGGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

607

Amino Acids

65.98

Weight (kDa)

8.71

Isoelectric Point (pI)

57.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	152 - 186	2.6e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	234 - 268	2.5e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009660)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35890 FvH4_2g35890 FvH4_2g35890 FvH4_2g35890
malus_domestica	MD08G1116500.v1.1 MD15G1096100.v1.1
prunus_persica	Prupe.1G451000_v2.0.a1 Prupe.1G451000_v2.0.a1
pyrus_communis	pycom08g09710 pycom15g08830
rosa_chinensis	RchiOBHm_Chr6g0305931
rosa_laevigata	RLG00000010845
rosa_multiflora	Rmu_sc0001809.1_g000050 Rmu_sc0039000.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162210
rosa_rugosa	Rorug06G0345400
rosa_samantha	Rh6AG457000 Rh6AG457100 Rh6BG444300 Rh6CG470900 Rh6DG457600
rosa_wichuraiana	Rw6G039870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	369, 1305
Acc36I	ACCTGC	1 cut(s)	1593
Acc65I	GGTACC	1 cut(s)	26
AccB1I	GGYRCC	3 cut(s)	26, 67, 480
AccII	CGCG	2 cut(s)	32, 414
AciI	CCGC	6 cut(s)	30, 119, 122, 149, 157, 308
AclWI	GGATC	5 cut(s)	897, 910, 1102, 1164, 1369
AcoI	YGGCCR	1 cut(s)	358
AcsI	RAATTY	3 cut(s)	472, 516, 1297
AcuI	CTGAAG	2 cut(s)	1745, 1806
AcyI	GRCGYC	1 cut(s)	68
AfaI	GTAC	6 cut(s)	28, 132, 439, 494, 740, 1072
AfiI	CCNNNNNNNGG	4 cut(s)	356, 386, 891, 1067
AflII	CTTAAG	1 cut(s)	1021
AgsI	TTSAA	5 cut(s)	128, 689, 1101, 1743, 1804
AjiI	CACGTC	1 cut(s)	1169
AjnI	CCWGG	2 cut(s)	1402, 1691
AjuI	GAANNNNNNNTTGG	2 cut(s)	747, 779
AluBI	AGCT	9 cut(s)	106, 196, 223, 457, 512, 572, 1193, 1454, 1459
AluI	AGCT	9 cut(s)	106, 196, 223, 457, 512, 572, 1193, 1454, 1459
Alw26I	GTCTC	3 cut(s)	405, 734, 1786
AlwI	GGATC	5 cut(s)	897, 910, 1102, 1164, 1369
AlwNI	CAGNNNCTG	1 cut(s)	223
Ama87I	CYCGRG	1 cut(s)	1260
AoxI	GGCC	7 cut(s)	329, 338, 358, 894, 917, 1035, 1391
ApoI	RAATTY	3 cut(s)	472, 516, 1297
Asp718I	GGTACC	1 cut(s)	26
AspLEI	GCGC	7 cut(s)	34, 70, 163, 280, 370, 416, 1306
AspS9I	GGNCC	4 cut(s)	113, 338, 894, 917
AsuHPI	GGTGA	1 cut(s)	980
AsuNHI	GCTAGC	1 cut(s)	638
AvaI	CYCGRG	1 cut(s)	1260
AvaII	GGWCC	1 cut(s)	113
BamHI	GGATCC	1 cut(s)	902
BanI	GGYRCC	3 cut(s)	26, 67, 480
BauI	CACGAG	3 cut(s)	395, 657, 1596
BccI	CCATC	5 cut(s)	803, 1256, 1337, 1361, 1513
BceAI	ACGGC	5 cut(s)	64, 81, 163, 277, 373
BciT130I	CCWGG	2 cut(s)	1404, 1693
BcoDI	GTCTC	3 cut(s)	405, 734, 1786
BfaI	CTAG	2 cut(s)	576, 639
BfmI	CTRYAG	3 cut(s)	197, 1083, 1665
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	1 cut(s)	1021
BfuAI	ACCTGC	1 cut(s)	1593
BglI	GCCNNNNNGGC	1 cut(s)	337
BglII	AGATCT	1 cut(s)	1115
BlpI	GCTNAGC	2 cut(s)	1005, 1455
BmcAI	AGTACT	2 cut(s)	439, 740
Bme1390I	CCNGG	2 cut(s)	1404, 1693
Bme18I	GGWCC	1 cut(s)	113
BmeT110I	CYCGRG	1 cut(s)	1260
BmgBI	CACGTC	1 cut(s)	1169
BmgT120I	GGNCC	4 cut(s)	113, 338, 894, 917
BmiI	GGNNCC	8 cut(s)	28, 69, 339, 482, 895, 904, 970, 1678
BmrFI	CCNGG	2 cut(s)	1404, 1693
BmrI	ACTGGG	1 cut(s)	1824
BmsI	GCATC	6 cut(s)	160, 172, 336, 521, 574, 664
BmtI	GCTAGC	1 cut(s)	642
BmuI	ACTGGG	1 cut(s)	1824
BplI	GAGNNNNNCTC	2 cut(s)	1542, 1574
Bpu1102I	GCTNAGC	2 cut(s)	1005, 1455
BpuEI	CTTGAG	2 cut(s)	470, 716
BsaHI	GRCGYC	1 cut(s)	68
BsaJI	CCNNGG	3 cut(s)	179, 1402, 1691
BsaWI	WCCGGW	2 cut(s)	23, 990
BsaXI	ACNNNNNCTCC	2 cut(s)	1362, 1392
Bsc4I	CCNNNNNNNGG	4 cut(s)	356, 386, 891, 1067
Bse118I	RCCGGY	4 cut(s)	70, 115, 235, 331
Bse1I	ACTGG	1 cut(s)	1819
Bse3DI	GCAATG	1 cut(s)	1723
BseBI	CCWGG	2 cut(s)	1404, 1693
BseDI	CCNNGG	3 cut(s)	179, 1402, 1691
BseGI	GGATG	5 cut(s)	163, 536, 589, 710, 1134
BseLI	CCNNNNNNNGG	4 cut(s)	356, 386, 891, 1067
BseMI	GCAATG	1 cut(s)	1723
BseMII	CTCAG	6 cut(s)	1019, 1134, 1266, 1446, 1511, 1523
BseNI	ACTGG	1 cut(s)	1819
BseX3I	CGGCCG	1 cut(s)	358
BseYI	CCCAGC	1 cut(s)	677
Bsh1236I	CGCG	2 cut(s)	32, 414
Bsh1285I	CGRYCG	1 cut(s)	361
BshFI	GGCC	7 cut(s)	331, 340, 360, 896, 919, 1037, 1393
BshNI	GGYRCC	3 cut(s)	26, 67, 480
BsiEI	CGRYCG	1 cut(s)	361
BsiHKCI	CYCGRG	1 cut(s)	1260
BsiSI	CCGG	8 cut(s)	24, 71, 101, 116, 236, 332, 361, 991
BslFI	GGGAC	2 cut(s)	283, 1384
BslI	CCNNNNNNNGG	4 cut(s)	356, 386, 891, 1067
BsmAI	GTCTC	3 cut(s)	405, 734, 1786
BsmFI	GGGAC	2 cut(s)	283, 1384
BsnI	GGCC	7 cut(s)	331, 340, 360, 896, 919, 1037, 1393
BsoBI	CYCGRG	1 cut(s)	1260
Bsp143I	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
Bsp1720I	GCTNAGC	2 cut(s)	1005, 1455
BspACI	CCGC	6 cut(s)	30, 119, 122, 149, 157, 308
BspANI	GGCC	7 cut(s)	331, 340, 360, 896, 919, 1037, 1393
BspCNI	CTCAG	6 cut(s)	1018, 1135, 1265, 1447, 1510, 1522
BspFNI	CGCG	2 cut(s)	32, 414
BspHI	TCATGA	1 cut(s)	838
BspLI	GGNNCC	8 cut(s)	28, 69, 339, 482, 895, 904, 970, 1678
BspMAI	CTGCAG	1 cut(s)	1087
BspMI	ACCTGC	1 cut(s)	1593
BspOI	GCTAGC	1 cut(s)	642
BspPI	GGATC	5 cut(s)	897, 910, 1102, 1164, 1369
BspQI	GCTCTTC	1 cut(s)	1533
BspT107I	GGYRCC	3 cut(s)	26, 67, 480
BspTI	CTTAAG	1 cut(s)	1021
BsrDI	GCAATG	1 cut(s)	1723
BsrFI	RCCGGY	4 cut(s)	70, 115, 235, 331
BsrI	ACTGG	1 cut(s)	1819
BssAI	RCCGGY	4 cut(s)	70, 115, 235, 331
BssECI	CCNNGG	3 cut(s)	179, 1402, 1691
BssMI	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
BssNI	GRCGYC	1 cut(s)	68
BssSI	CACGAG	3 cut(s)	395, 657, 1596
Bst2BI	CACGAG	3 cut(s)	395, 657, 1596
Bst2UI	CCWGG	2 cut(s)	1404, 1693
Bst6I	CTCTTC	2 cut(s)	1045, 1533
BstACI	GRCGYC	1 cut(s)	68
BstAFI	CTTAAG	1 cut(s)	1021
BstAPI	GCANNNNNTGC	2 cut(s)	795, 881
BstC8I	GCNNGC	6 cut(s)	159, 237, 306, 418, 640, 712
BstDEI	CTNAG	6 cut(s)	1005, 1143, 1252, 1455, 1497, 1509
BstDSI	CCRYGG	1 cut(s)	179
BstEII	GGTNACC	1 cut(s)	1310
BstF5I	GGATG	5 cut(s)	163, 536, 589, 710, 1134
BstFNI	CGCG	2 cut(s)	32, 414
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	7 cut(s)	34, 70, 163, 280, 370, 416, 1306
BstKTI	GATC	8 cut(s)	847, 905, 979, 1097, 1118, 1159, 1294, 1364
BstMAI	GTCTC	3 cut(s)	405, 734, 1786
BstMBI	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
BstMCI	CGRYCG	1 cut(s)	361
BstNI	CCWGG	2 cut(s)	1404, 1693
BstNSI	RCATGY	1 cut(s)	868
BstPI	GGTNACC	1 cut(s)	1310
BstSCI	CCNGG	2 cut(s)	1402, 1691
BstSFI	CTRYAG	3 cut(s)	197, 1083, 1665
BstUI	CGCG	2 cut(s)	32, 414
BstX2I	RGATCY	4 cut(s)	902, 1094, 1115, 1156
BstYI	RGATCY	4 cut(s)	902, 1094, 1115, 1156
BstZI	CGGCCG	1 cut(s)	358
BsuRI	GGCC	7 cut(s)	331, 340, 360, 896, 919, 1037, 1393
BtgI	CCRYGG	1 cut(s)	179
BtgZI	GCGATG	2 cut(s)	960, 1389
BtrI	CACGTC	1 cut(s)	1169
BtsCI	GGATG	5 cut(s)	163, 536, 589, 710, 1134
BtsI	GCAGTG	1 cut(s)	1357
BtsIMutI	CAGTG	1 cut(s)	1357
BveI	ACCTGC	1 cut(s)	1593
Cac8I	GCNNGC	6 cut(s)	159, 237, 306, 418, 640, 712
CaiI	CAGNNNCTG	1 cut(s)	223
CciI	TCATGA	1 cut(s)	838
CfoI	GCGC	7 cut(s)	34, 70, 163, 280, 370, 416, 1306
Cfr10I	RCCGGY	4 cut(s)	70, 115, 235, 331
Cfr13I	GGNCC	4 cut(s)	113, 338, 894, 917
CseI	GACGC	2 cut(s)	181, 310
Csp6I	GTAC	6 cut(s)	27, 131, 438, 493, 739, 1071
CspCI	CAANNNNNGTGG	2 cut(s)	366, 401
CviAII	CATG	5 cut(s)	650, 790, 839, 865, 1307
CviQI	GTAC	6 cut(s)	27, 131, 438, 493, 739, 1071
DdeI	CTNAG	6 cut(s)	1005, 1143, 1252, 1455, 1497, 1509
DinI	GGCGCC	1 cut(s)	69
DpnI	GATC	8 cut(s)	846, 904, 978, 1096, 1117, 1158, 1293, 1363
DpnII	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
EaeI	YGGCCR	1 cut(s)	358
EagI	CGGCCG	1 cut(s)	358
Eam1104I	CTCTTC	2 cut(s)	1045, 1533
EarI	CTCTTC	2 cut(s)	1045, 1533
EclXI	CGGCCG	1 cut(s)	358
Eco47I	GGWCC	1 cut(s)	113
Eco52I	CGGCCG	1 cut(s)	358
Eco57I	CTGAAG	2 cut(s)	1745, 1806
Eco88I	CYCGRG	1 cut(s)	1260
Eco91I	GGTNACC	1 cut(s)	1310
EcoO65I	GGTNACC	1 cut(s)	1310
EcoRII	CCWGG	2 cut(s)	1402, 1691
EcoT22I	ATGCAT	1 cut(s)	791
EgeI	GGCGCC	1 cut(s)	69
EheI	GGCGCC	1 cut(s)	69
FaeI	CATG	5 cut(s)	653, 793, 842, 868, 1310
FaqI	GGGAC	2 cut(s)	283, 1384
FatI	CATG	5 cut(s)	649, 789, 838, 864, 1306
FauI	CCCGC	1 cut(s)	150
FokI	GGATG	5 cut(s)	150, 543, 596, 717, 1121
FspBI	CTAG	2 cut(s)	576, 639
FspI	TGCGCA	2 cut(s)	369, 1305
GlaI	GCGC	7 cut(s)	33, 69, 162, 279, 369, 415, 1305
GsaI	CCCAGC	1 cut(s)	681
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	7 cut(s)	331, 340, 360, 896, 919, 1037, 1393
HapII	CCGG	8 cut(s)	24, 71, 101, 116, 236, 332, 361, 991
HgaI	GACGC	2 cut(s)	181, 310
HhaI	GCGC	7 cut(s)	34, 70, 163, 280, 370, 416, 1306
Hin1I	GRCGYC	1 cut(s)	68
Hin1II	CATG	5 cut(s)	653, 793, 842, 868, 1310
Hin6I	GCGC	7 cut(s)	32, 68, 161, 278, 368, 414, 1304
HinP1I	GCGC	7 cut(s)	32, 68, 161, 278, 368, 414, 1304
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HinfI	GANTC	7 cut(s)	398, 653, 662, 1327, 1501, 1566, 1661
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	8 cut(s)	24, 71, 101, 116, 236, 332, 361, 991
HphI	GGTGA	1 cut(s)	980
Hpy166II	GTNNAC	6 cut(s)	88, 355, 562, 647, 988, 1166
Hpy188I	TCNGA	6 cut(s)	300, 626, 775, 1366, 1500, 1786
Hpy8I	GTNNAC	6 cut(s)	88, 355, 562, 647, 988, 1166
Hpy99I	CGWCG	1 cut(s)	346
HpyAV	CCTTC	1 cut(s)	819
HpyCH4IV	ACGT	1 cut(s)	1168
HpyF3I	CTNAG	6 cut(s)	1005, 1143, 1252, 1455, 1497, 1509
HpySE526I	ACGT	1 cut(s)	1168
Hsp92I	GRCGYC	1 cut(s)	68
Hsp92II	CATG	5 cut(s)	653, 793, 842, 868, 1310
HspAI	GCGC	7 cut(s)	32, 68, 161, 278, 368, 414, 1304
KasI	GGCGCC	1 cut(s)	67
KpnI	GGTACC	1 cut(s)	30
KroI	GCCGGC	1 cut(s)	235
KroNI	GCCGGC	1 cut(s)	237
KspAI	GTTAAC	1 cut(s)	88
Kzo9I	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
LguI	GCTCTTC	1 cut(s)	1533
LmnI	GCTCC	5 cut(s)	4, 103, 593, 968, 1695
LweI	GCATC	6 cut(s)	160, 172, 336, 521, 574, 664
MaeI	CTAG	2 cut(s)	576, 639
MaeII	ACGT	1 cut(s)	1168
MaeIII	GTNAC	8 cut(s)	183, 201, 207, 249, 255, 608, 1310, 1771
MalI	GATC	8 cut(s)	846, 904, 978, 1096, 1117, 1158, 1293, 1363
MboI	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
MboII	GAAGA	8 cut(s)	49, 683, 830, 854, 1032, 1035, 1089, 1550
MfeI	CAATTG	2 cut(s)	53, 463
MflI	RGATCY	4 cut(s)	902, 1094, 1115, 1156
MluCI	AATT	9 cut(s)	41, 53, 383, 463, 472, 516, 544, 597, 1297
Mly113I	GGCGCC	1 cut(s)	68
MlyI	GAGTC	1 cut(s)	407
MmeI	TCCRAC	3 cut(s)	571, 1162, 1771
Mph1103I	ATGCAT	1 cut(s)	791
MroNI	GCCGGC	1 cut(s)	235
MseI	TTAA	2 cut(s)	87, 1022
MslI	CAYNNNNRTG	1 cut(s)	555
MspA1I	CMGCKG	3 cut(s)	223, 512, 1454
MspCI	CTTAAG	1 cut(s)	1021
MspI	CCGG	8 cut(s)	24, 71, 101, 116, 236, 332, 361, 991
MspR9I	CCNGG	2 cut(s)	1404, 1693
MunI	CAATTG	2 cut(s)	53, 463
MvaI	CCWGG	2 cut(s)	1404, 1693
MvnI	CGCG	2 cut(s)	32, 414
NaeI	GCCGGC	1 cut(s)	237
NarI	GGCGCC	1 cut(s)	68
NdeII	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
NgoMIV	GCCGGC	1 cut(s)	235
NheI	GCTAGC	1 cut(s)	638
NlaIII	CATG	5 cut(s)	653, 793, 842, 868, 1310
NlaIV	GGNNCC	8 cut(s)	28, 69, 339, 482, 895, 904, 970, 1678
NmuCI	GTSAC	5 cut(s)	183, 201, 207, 255, 1771
NsbI	TGCGCA	2 cut(s)	369, 1305
NsiI	ATGCAT	1 cut(s)	791
NspI	RCATGY	1 cut(s)	868
PaeR7I	CTCGAG	1 cut(s)	1260
PagI	TCATGA	1 cut(s)	838
PciSI	GCTCTTC	1 cut(s)	1533
PcsI	WCGNNNNNNNCGW	1 cut(s)	290
PdiI	GCCGGC	1 cut(s)	237
PfeI	GAWTC	6 cut(s)	653, 662, 1327, 1501, 1566, 1661
PleI	GAGTC	1 cut(s)	406
PluTI	GGCGCC	1 cut(s)	71
PpsI	GAGTC	1 cut(s)	406
Psp6I	CCWGG	2 cut(s)	1402, 1691
PspEI	GGTNACC	1 cut(s)	1310
PspFI	CCCAGC	1 cut(s)	677
PspGI	CCWGG	2 cut(s)	1402, 1691
PspN4I	GGNNCC	8 cut(s)	28, 69, 339, 482, 895, 904, 970, 1678
PspPI	GGNCC	4 cut(s)	113, 338, 894, 917
PstI	CTGCAG	1 cut(s)	1087
PstNI	CAGNNNCTG	1 cut(s)	223
PsuI	RGATCY	4 cut(s)	902, 1094, 1115, 1156
PvuII	CAGCTG	3 cut(s)	223, 512, 1454
RsaI	GTAC	6 cut(s)	28, 132, 439, 494, 740, 1072
RsaNI	GTAC	6 cut(s)	27, 131, 438, 493, 739, 1071
RseI	CAYNNNNRTG	1 cut(s)	555
SapI	GCTCTTC	1 cut(s)	1533
SaqAI	TTAA	2 cut(s)	87, 1022
Sau3AI	GATC	8 cut(s)	844, 902, 976, 1094, 1115, 1156, 1291, 1361
Sau96I	GGNCC	4 cut(s)	113, 338, 894, 917
ScaI	AGTACT	2 cut(s)	439, 740
SchI	GAGTC	1 cut(s)	407
ScrFI	CCNGG	2 cut(s)	1404, 1693
SfaNI	GCATC	6 cut(s)	160, 172, 336, 521, 574, 664
SfcI	CTRYAG	3 cut(s)	197, 1083, 1665
SfiI	GGCCNNNNNGGCC	1 cut(s)	337
SfoI	GGCGCC	1 cut(s)	69
Sfr274I	CTCGAG	1 cut(s)	1260
SinI	GGWCC	1 cut(s)	113
SlaI	CTCGAG	1 cut(s)	1260
SmiMI	CAYNNNNRTG	1 cut(s)	555
SmlI	CTYRAG	4 cut(s)	485, 731, 1021, 1260
SmoI	CTYRAG	4 cut(s)	485, 731, 1021, 1260
Sse9I	AATT	9 cut(s)	41, 53, 383, 463, 472, 516, 544, 597, 1297
SsiI	CCGC	6 cut(s)	30, 119, 122, 149, 157, 308
SspDI	GGCGCC	1 cut(s)	67
SspMI	CTAG	2 cut(s)	576, 639
StyD4I	CCNGG	2 cut(s)	1402, 1691
TaiI	ACGT	1 cut(s)	1171
TaqI	TCGA	1 cut(s)	1261
TaqII	GACCGA	1 cut(s)	955
TasI	AATT	9 cut(s)	41, 53, 383, 463, 472, 516, 544, 597, 1297
TatI	WGTACW	4 cut(s)	130, 437, 492, 738
TauI	GCSGC	2 cut(s)	122, 151
TfiI	GAWTC	6 cut(s)	653, 662, 1327, 1501, 1566, 1661
Tru1I	TTAA	2 cut(s)	87, 1022
Tru9I	TTAA	2 cut(s)	87, 1022
TscAI	CASTG	1 cut(s)	1357
TseFI	GTSAC	5 cut(s)	183, 201, 207, 255, 1771
Tsp45I	GTSAC	5 cut(s)	183, 201, 207, 255, 1771
TspDTI	ATGAA	8 cut(s)	582, 666, 827, 855, 963, 1340, 1443, 1551
TspGWI	ACGGA	2 cut(s)	73, 1541
TspRI	CASTG	1 cut(s)	1357
Vha464I	CTTAAG	1 cut(s)	1021
VpaK11BI	GGWCC	1 cut(s)	113
XapI	RAATTY	3 cut(s)	472, 516, 1297
XceI	RCATGY	1 cut(s)	868
XhoI	CTCGAG	1 cut(s)	1260
XspI	CTAG	2 cut(s)	576, 639
ZrmI	AGTACT	2 cut(s)	439, 740
Zsp2I	ATGCAT	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.