Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001809.1

Orthogroup ID

OG0009660

Physical Location & Seq

Genomic Coordinates Reverse (-)

254599 .. 259352

Gene Structure 4754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001809.1_g000050.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

atggagcagagcgaaacggtttccagtacggcgccgaagaaattggccaggcaattggatttcacggcgccggttcagccgtccgttaactctgcgttgccggagcggtctggaccggcggcggttcaagtacagtcgcagccacagccgcatctgcgggcgcatccacagacgcagccgtggtcacagccacagccacagctacagtcacagtcacagtcacagtcacagccacagcagctgcataactcgccggcacagttggcgttacagtcacaacagcaggggacggtggcgcaatcgccgaagccgtatctgacgcaggcggtcttgcactttcaggcgaggccggtggggccgacgatgcccgtgaacggccggattgcgcacttgccaccgaaattgggaaaacacgagtctcctaaaccacgcgcacgcagcgaagcgaaagaaagtactccaaagaaacaaaagctgtgcaattgtaaaaattcacggtgcctcaagttgtactgtgagtgctttgcagctggaatttattgtaaaggatgcaactgcataaattgtcataataatgtggacaacgaagctgctaggcaggatgctgttggagcaattttagagcgtaacccaaaagcattcagaccaaagattgctagcagtccacatgaatctcgcgattcttgggaagatgctggggaggttcaaaagcaccacaaaggatgtgcttgcaggaagtctgggtgtctcaagaagtactgtgagtgcttccaagccaatgttctgtgttctgaaaactgtaaatgcatggactgcaagaactttgatggaagtgaagaaagaagggctatctttcatgaagatcacaatacgatagccaacatgcaacaggcaaatgccgccattagtggggccattggatcctctgggtttgggcctctagtgtccagacaaagaccgagcgatgaacttttttctggcattgccagagatcaatcagttcaccggattacacaggctcagcaggaaaatcacttaagacctcctatggcctcttcttctctgttatctgttcctacttttggtattcctaatgctgcagtatcaggatcttcaaaacccacatacagatctatgttggcaaatatcatccaacctgagaacataaaggatctgtgttcacgtctggttgtagtttcaggagaagctgcaaaggcacttgcagaaaataggcaaaaagagatgattgataagactactaccatctcagccactcgagaggggaaagaaagtaaaagggaacaagttcaaaatcctgcgcatggtgaccgtttgggaatgaatcaagcagatagagatggcagcagtggttctggatcagatggaggcgatgtgcaaaatagtaggccaatgtcccctggaacacttgccctgatgtgtgatgaacaagataagatgtttatggcagctgagctgccaaatgggataacaacaaatagtcaaagcacaactcagaatccatctcaggaaataggttgcacggaggtttatgaagagcaggaaagagttatcctcacaggattcagggatttcctaaacctgcttattactcgtggtagtataaaagaaacaatgtgttctcccatagccaaaagggagagggaaatccaaaaggattctgtagagggtggaaccccaaagaaacccaggtgcgagaaagcaacatatagcaatgacattgggaaatctcctgcttcaacaaatggtaaagtgcttcagtcagtagtcacttatgtctctgaagttggattgcccttgaaaaataatactgggcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

612

Amino Acids

66.71

Weight (kDa)

8.76

Isoelectric Point (pI)

60.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009660)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g35890 FvH4_2g35890 FvH4_2g35890 FvH4_2g35890
malus_domestica	MD08G1116500.v1.1 MD15G1096100.v1.1
prunus_persica	Prupe.1G451000_v2.0.a1 Prupe.1G451000_v2.0.a1
pyrus_communis	pycom08g09710 pycom15g08830
rosa_chinensis	RchiOBHm_Chr6g0305931
rosa_laevigata	RLG00000010845
rosa_multiflora	Rmu_sc0001809.1_g000050 Rmu_sc0039000.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162210
rosa_rugosa	Rorug06G0345400
rosa_samantha	Rh6AG457000 Rh6AG457100 Rh6BG444300 Rh6CG470900 Rh6DG457600
rosa_wichuraiana	Rw6G039870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	387, 1320
Acc36I	ACCTGC	1 cut(s)	1608
AccB1I	GGYRCC	3 cut(s)	31, 67, 498
AccBSI	CCGCTC	1 cut(s)	106
AccII	CGCG	2 cut(s)	432, 678
AciI	CCGC	7 cut(s)	106, 119, 122, 149, 157, 326, 900
AclWI	GGATC	5 cut(s)	915, 928, 1117, 1179, 1384
AcoI	YGGCCR	2 cut(s)	45, 376
AcsI	RAATTY	2 cut(s)	490, 534
AcuI	CTGAAG	2 cut(s)	1760, 1821
AcyI	GRCGYC	2 cut(s)	32, 68
AfaI	GTAC	5 cut(s)	28, 132, 457, 512, 758
AfiI	CCNNNNNNNGG	5 cut(s)	374, 404, 909, 1082, 1322
AflII	CTTAAG	1 cut(s)	1036
AgsI	TTSAA	6 cut(s)	128, 707, 1116, 1310, 1758, 1819
AjiI	CACGTC	1 cut(s)	1184
AjnI	CCWGG	3 cut(s)	47, 1417, 1706
AjuI	GAANNNNNNNTTGG	2 cut(s)	765, 797
AluBI	AGCT	8 cut(s)	202, 241, 475, 530, 590, 1208, 1469, 1474
AluI	AGCT	8 cut(s)	202, 241, 475, 530, 590, 1208, 1469, 1474
Alw26I	GTCTC	3 cut(s)	423, 752, 1801
AlwI	GGATC	5 cut(s)	915, 928, 1117, 1179, 1384
AlwNI	CAGNNNCTG	1 cut(s)	241
Ama87I	CYCGRG	1 cut(s)	1275
AoxI	GGCC	8 cut(s)	45, 347, 356, 376, 912, 935, 1050, 1406
ApoI	RAATTY	2 cut(s)	490, 534
Asp700I	GAANNNNTTC	1 cut(s)	1305
AspLEI	GCGC	7 cut(s)	34, 70, 163, 298, 388, 434, 1321
AspS9I	GGNCC	4 cut(s)	113, 356, 912, 935
AsuHPI	GGTGA	2 cut(s)	995, 1337
AsuNHI	GCTAGC	1 cut(s)	656
AvaI	CYCGRG	1 cut(s)	1275
AvaII	GGWCC	1 cut(s)	113
BalI	TGGCCA	1 cut(s)	47
BamHI	GGATCC	1 cut(s)	920
BanI	GGYRCC	3 cut(s)	31, 67, 498
BauI	CACGAG	2 cut(s)	413, 1611
BccI	CCATC	5 cut(s)	821, 1271, 1352, 1376, 1528
BceAI	ACGGC	6 cut(s)	45, 64, 81, 163, 295, 391
BciT130I	CCWGG	3 cut(s)	49, 1419, 1708
BcoDI	GTCTC	3 cut(s)	423, 752, 1801
BfaI	CTAG	3 cut(s)	594, 657, 941
BfmI	CTRYAG	3 cut(s)	203, 1098, 1680
BfoI	RGCGCY	2 cut(s)	35, 71
BfrI	CTTAAG	1 cut(s)	1036
BfuAI	ACCTGC	1 cut(s)	1608
BglI	GCCNNNNNGGC	1 cut(s)	355
BglII	AGATCT	1 cut(s)	1130
BlpI	GCTNAGC	2 cut(s)	1020, 1470
BmcAI	AGTACT	2 cut(s)	457, 758
Bme1390I	CCNGG	3 cut(s)	49, 1419, 1708
Bme18I	GGWCC	1 cut(s)	113
BmeT110I	CYCGRG	1 cut(s)	1275
BmgBI	CACGTC	1 cut(s)	1184
BmgT120I	GGNCC	4 cut(s)	113, 356, 912, 935
BmiI	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 922, 1693
BmrFI	CCNGG	3 cut(s)	49, 1419, 1708
BmrI	ACTGGG	1 cut(s)	1839
BmsI	GCATC	6 cut(s)	160, 172, 354, 539, 592, 682
BmtI	GCTAGC	1 cut(s)	660
BmuI	ACTGGG	1 cut(s)	1839
BplI	GAGNNNNNCTC	2 cut(s)	1557, 1589
Bpu1102I	GCTNAGC	2 cut(s)	1020, 1470
BpuEI	CTTGAG	2 cut(s)	488, 734
BsaHI	GRCGYC	2 cut(s)	32, 68
BsaJI	CCNNGG	3 cut(s)	179, 1417, 1706
BsaWI	WCCGGW	1 cut(s)	1005
BsaXI	ACNNNNNCTCC	2 cut(s)	1377, 1407
Bsc4I	CCNNNNNNNGG	5 cut(s)	374, 404, 909, 1082, 1322
Bse118I	RCCGGY	4 cut(s)	70, 115, 253, 349
Bse1I	ACTGG	2 cut(s)	24, 1834
Bse3DI	GCAATG	2 cut(s)	981, 1738
BseBI	CCWGG	3 cut(s)	49, 1419, 1708
BseDI	CCNNGG	3 cut(s)	179, 1417, 1706
BseGI	GGATG	5 cut(s)	163, 554, 607, 728, 1149
BseLI	CCNNNNNNNGG	5 cut(s)	374, 404, 909, 1082, 1322
BseMI	GCAATG	2 cut(s)	981, 1738
BseMII	CTCAG	6 cut(s)	1034, 1149, 1281, 1461, 1526, 1538
BseNI	ACTGG	2 cut(s)	24, 1834
BseX3I	CGGCCG	1 cut(s)	376
BseYI	CCCAGC	1 cut(s)	695
Bsh1236I	CGCG	2 cut(s)	432, 678
Bsh1285I	CGRYCG	1 cut(s)	379
BshFI	GGCC	8 cut(s)	47, 349, 358, 378, 914, 937, 1052, 1408
BshNI	GGYRCC	3 cut(s)	31, 67, 498
BsiEI	CGRYCG	1 cut(s)	379
BsiHKCI	CYCGRG	1 cut(s)	1275
BsiSI	CCGG	7 cut(s)	71, 101, 116, 254, 350, 379, 1006
BslFI	GGGAC	2 cut(s)	301, 1399
BslI	CCNNNNNNNGG	5 cut(s)	374, 404, 909, 1082, 1322
BsmAI	GTCTC	3 cut(s)	423, 752, 1801
BsmFI	GGGAC	2 cut(s)	301, 1399
BsmI	GAATGC	1 cut(s)	638
BsnI	GGCC	8 cut(s)	47, 349, 358, 378, 914, 937, 1052, 1408
BsoBI	CYCGRG	1 cut(s)	1275
Bsp143I	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
Bsp1720I	GCTNAGC	2 cut(s)	1020, 1470
Bsp68I	TCGCGA	1 cut(s)	678
BspACI	CCGC	7 cut(s)	106, 119, 122, 149, 157, 326, 900
BspANI	GGCC	8 cut(s)	47, 349, 358, 378, 914, 937, 1052, 1408
BspCNI	CTCAG	6 cut(s)	1033, 1150, 1280, 1462, 1525, 1537
BspFNI	CGCG	2 cut(s)	432, 678
BspHI	TCATGA	1 cut(s)	856
BspLI	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 922, 1693
BspMAI	CTGCAG	1 cut(s)	1102
BspMI	ACCTGC	1 cut(s)	1608
BspOI	GCTAGC	1 cut(s)	660
BspPI	GGATC	5 cut(s)	915, 928, 1117, 1179, 1384
BspQI	GCTCTTC	1 cut(s)	1548
BspT107I	GGYRCC	3 cut(s)	31, 67, 498
BspTI	CTTAAG	1 cut(s)	1036
BsrBI	CCGCTC	1 cut(s)	106
BsrDI	GCAATG	2 cut(s)	981, 1738
BsrFI	RCCGGY	4 cut(s)	70, 115, 253, 349
BsrI	ACTGG	2 cut(s)	24, 1834
BssAI	RCCGGY	4 cut(s)	70, 115, 253, 349
BssECI	CCNNGG	3 cut(s)	179, 1417, 1706
BssMI	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
BssNI	GRCGYC	2 cut(s)	32, 68
BssSI	CACGAG	2 cut(s)	413, 1611
Bst2BI	CACGAG	2 cut(s)	413, 1611
Bst2UI	CCWGG	3 cut(s)	49, 1419, 1708
Bst6I	CTCTTC	2 cut(s)	1060, 1548
BstACI	GRCGYC	2 cut(s)	32, 68
BstAFI	CTTAAG	1 cut(s)	1036
BstAPI	GCANNNNNTGC	1 cut(s)	813
BstC8I	GCNNGC	6 cut(s)	159, 255, 324, 436, 658, 730
BstDEI	CTNAG	6 cut(s)	1020, 1158, 1267, 1470, 1512, 1524
BstDSI	CCRYGG	1 cut(s)	179
BstEII	GGTNACC	1 cut(s)	1325
BstF5I	GGATG	5 cut(s)	163, 554, 607, 728, 1149
BstFNI	CGCG	2 cut(s)	432, 678
BstH2I	RGCGCY	2 cut(s)	35, 71
BstHHI	GCGC	7 cut(s)	34, 70, 163, 298, 388, 434, 1321
BstKTI	GATC	7 cut(s)	865, 923, 994, 1112, 1133, 1174, 1379
BstMAI	GTCTC	3 cut(s)	423, 752, 1801
BstMBI	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
BstMCI	CGRYCG	1 cut(s)	379
BstNI	CCWGG	3 cut(s)	49, 1419, 1708
BstNSI	RCATGY	1 cut(s)	886
BstPI	GGTNACC	1 cut(s)	1325
BstSCI	CCNGG	3 cut(s)	47, 1417, 1706
BstSFI	CTRYAG	3 cut(s)	203, 1098, 1680
BstUI	CGCG	2 cut(s)	432, 678
BstX2I	RGATCY	4 cut(s)	920, 1109, 1130, 1171
BstXI	CCANNNNNNTGG	1 cut(s)	55
BstYI	RGATCY	4 cut(s)	920, 1109, 1130, 1171
BstZI	CGGCCG	1 cut(s)	376
BsuRI	GGCC	8 cut(s)	47, 349, 358, 378, 914, 937, 1052, 1408
BtgI	CCRYGG	1 cut(s)	179
BtgZI	GCGATG	2 cut(s)	978, 1404
BtrI	CACGTC	1 cut(s)	1184
BtsCI	GGATG	5 cut(s)	163, 554, 607, 728, 1149
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	1 cut(s)	1372
BtuMI	TCGCGA	1 cut(s)	678
BveI	ACCTGC	1 cut(s)	1608
Cac8I	GCNNGC	6 cut(s)	159, 255, 324, 436, 658, 730
CaiI	CAGNNNCTG	1 cut(s)	241
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	7 cut(s)	34, 70, 163, 298, 388, 434, 1321
Cfr10I	RCCGGY	4 cut(s)	70, 115, 253, 349
Cfr13I	GGNCC	4 cut(s)	113, 356, 912, 935
CseI	GACGC	2 cut(s)	181, 328
Csp6I	GTAC	5 cut(s)	27, 131, 456, 511, 757
CspCI	CAANNNNNGTGG	2 cut(s)	384, 419
CviAII	CATG	5 cut(s)	668, 808, 857, 883, 1322
CviQI	GTAC	5 cut(s)	27, 131, 456, 511, 757
DdeI	CTNAG	6 cut(s)	1020, 1158, 1267, 1470, 1512, 1524
DinI	GGCGCC	2 cut(s)	33, 69
DpnI	GATC	7 cut(s)	864, 922, 993, 1111, 1132, 1173, 1378
DpnII	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
EaeI	YGGCCR	2 cut(s)	45, 376
EagI	CGGCCG	1 cut(s)	376
Eam1104I	CTCTTC	2 cut(s)	1060, 1548
EarI	CTCTTC	2 cut(s)	1060, 1548
EclXI	CGGCCG	1 cut(s)	376
Eco47I	GGWCC	1 cut(s)	113
Eco52I	CGGCCG	1 cut(s)	376
Eco57I	CTGAAG	2 cut(s)	1760, 1821
Eco88I	CYCGRG	1 cut(s)	1275
Eco91I	GGTNACC	1 cut(s)	1325
EcoO65I	GGTNACC	1 cut(s)	1325
EcoRII	CCWGG	3 cut(s)	47, 1417, 1706
EcoT22I	ATGCAT	1 cut(s)	809
EgeI	GGCGCC	2 cut(s)	33, 69
EheI	GGCGCC	2 cut(s)	33, 69
FaeI	CATG	5 cut(s)	671, 811, 860, 886, 1325
FaqI	GGGAC	2 cut(s)	301, 1399
FatI	CATG	5 cut(s)	667, 807, 856, 882, 1321
FauI	CCCGC	1 cut(s)	150
FokI	GGATG	5 cut(s)	150, 561, 614, 735, 1136
FspBI	CTAG	3 cut(s)	594, 657, 941
FspI	TGCGCA	2 cut(s)	387, 1320
GlaI	GCGC	7 cut(s)	33, 69, 162, 297, 387, 433, 1320
GsaI	CCCAGC	1 cut(s)	699
HaeII	RGCGCY	2 cut(s)	35, 71
HaeIII	GGCC	8 cut(s)	47, 349, 358, 378, 914, 937, 1052, 1408
HapII	CCGG	7 cut(s)	71, 101, 116, 254, 350, 379, 1006
HgaI	GACGC	2 cut(s)	181, 328
HhaI	GCGC	7 cut(s)	34, 70, 163, 298, 388, 434, 1321
Hin1I	GRCGYC	2 cut(s)	32, 68
Hin1II	CATG	5 cut(s)	671, 811, 860, 886, 1325
Hin6I	GCGC	7 cut(s)	32, 68, 161, 296, 386, 432, 1319
HinP1I	GCGC	7 cut(s)	32, 68, 161, 296, 386, 432, 1319
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HinfI	GANTC	7 cut(s)	416, 671, 680, 1342, 1516, 1581, 1676
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	7 cut(s)	71, 101, 116, 254, 350, 379, 1006
HphI	GGTGA	2 cut(s)	995, 1337
Hpy166II	GTNNAC	6 cut(s)	88, 373, 580, 665, 1003, 1181
Hpy188I	TCNGA	6 cut(s)	318, 644, 793, 1381, 1515, 1801
Hpy8I	GTNNAC	6 cut(s)	88, 373, 580, 665, 1003, 1181
Hpy99I	CGWCG	1 cut(s)	364
HpyAV	CCTTC	1 cut(s)	837
HpyCH4IV	ACGT	1 cut(s)	1183
HpyF3I	CTNAG	6 cut(s)	1020, 1158, 1267, 1470, 1512, 1524
HpySE526I	ACGT	1 cut(s)	1183
Hsp92I	GRCGYC	2 cut(s)	32, 68
Hsp92II	CATG	5 cut(s)	671, 811, 860, 886, 1325
HspAI	GCGC	7 cut(s)	32, 68, 161, 296, 386, 432, 1319
KasI	GGCGCC	2 cut(s)	31, 67
KroI	GCCGGC	1 cut(s)	253
KroNI	GCCGGC	1 cut(s)	255
KspAI	GTTAAC	1 cut(s)	88
Kzo9I	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
LguI	GCTCTTC	1 cut(s)	1548
LmnI	GCTCC	3 cut(s)	4, 103, 611
LweI	GCATC	6 cut(s)	160, 172, 354, 539, 592, 682
MaeI	CTAG	3 cut(s)	594, 657, 941
MaeII	ACGT	1 cut(s)	1183
MalI	GATC	7 cut(s)	864, 922, 993, 1111, 1132, 1173, 1378
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
MboII	GAAGA	8 cut(s)	49, 701, 848, 872, 1047, 1050, 1104, 1565
MfeI	CAATTG	2 cut(s)	53, 481
MflI	RGATCY	4 cut(s)	920, 1109, 1130, 1171
MlsI	TGGCCA	1 cut(s)	47
MluCI	AATT	8 cut(s)	41, 53, 401, 481, 490, 534, 562, 615
MluNI	TGGCCA	1 cut(s)	47
Mly113I	GGCGCC	2 cut(s)	32, 68
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	3 cut(s)	589, 1177, 1786
Mox20I	TGGCCA	1 cut(s)	47
Mph1103I	ATGCAT	1 cut(s)	809
MroNI	GCCGGC	1 cut(s)	253
MroXI	GAANNNNTTC	1 cut(s)	1305
MscI	TGGCCA	1 cut(s)	47
MseI	TTAA	2 cut(s)	87, 1037
MslI	CAYNNNNRTG	1 cut(s)	573
Msp20I	TGGCCA	1 cut(s)	47
MspA1I	CMGCKG	3 cut(s)	241, 530, 1469
MspCI	CTTAAG	1 cut(s)	1036
MspI	CCGG	7 cut(s)	71, 101, 116, 254, 350, 379, 1006
MspR9I	CCNGG	3 cut(s)	49, 1419, 1708
MunI	CAATTG	2 cut(s)	53, 481
Mva1269I	GAATGC	1 cut(s)	638
MvaI	CCWGG	3 cut(s)	49, 1419, 1708
MvnI	CGCG	2 cut(s)	432, 678
NaeI	GCCGGC	1 cut(s)	255
NarI	GGCGCC	2 cut(s)	32, 68
NdeII	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
NgoMIV	GCCGGC	1 cut(s)	253
NheI	GCTAGC	1 cut(s)	656
NlaIII	CATG	5 cut(s)	671, 811, 860, 886, 1325
NlaIV	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 922, 1693
NmuCI	GTSAC	8 cut(s)	183, 207, 213, 219, 225, 273, 1325, 1786
NruI	TCGCGA	1 cut(s)	678
NsbI	TGCGCA	2 cut(s)	387, 1320
NsiI	ATGCAT	1 cut(s)	809
NspI	RCATGY	1 cut(s)	886
PaeR7I	CTCGAG	1 cut(s)	1275
PagI	TCATGA	1 cut(s)	856
PciSI	GCTCTTC	1 cut(s)	1548
PcsI	WCGNNNNNNNCGW	1 cut(s)	308
PctI	GAATGC	1 cut(s)	638
PdiI	GCCGGC	1 cut(s)	255
PdmI	GAANNNNTTC	1 cut(s)	1305
PfeI	GAWTC	6 cut(s)	671, 680, 1342, 1516, 1581, 1676
PleI	GAGTC	1 cut(s)	424
PluTI	GGCGCC	2 cut(s)	35, 71
PpsI	GAGTC	1 cut(s)	424
Psp6I	CCWGG	3 cut(s)	47, 1417, 1706
PspEI	GGTNACC	1 cut(s)	1325
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	3 cut(s)	47, 1417, 1706
PspN4I	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 922, 1693
PspPI	GGNCC	4 cut(s)	113, 356, 912, 935
PstI	CTGCAG	1 cut(s)	1102
PstNI	CAGNNNCTG	1 cut(s)	241
PsuI	RGATCY	4 cut(s)	920, 1109, 1130, 1171
PvuII	CAGCTG	3 cut(s)	241, 530, 1469
RruI	TCGCGA	1 cut(s)	678
RsaI	GTAC	5 cut(s)	28, 132, 457, 512, 758
RsaNI	GTAC	5 cut(s)	27, 131, 456, 511, 757
RseI	CAYNNNNRTG	1 cut(s)	573
SapI	GCTCTTC	1 cut(s)	1548
SaqAI	TTAA	2 cut(s)	87, 1037
Sau3AI	GATC	7 cut(s)	862, 920, 991, 1109, 1130, 1171, 1376
Sau96I	GGNCC	4 cut(s)	113, 356, 912, 935
ScaI	AGTACT	2 cut(s)	457, 758
SchI	GAGTC	1 cut(s)	425
ScrFI	CCNGG	3 cut(s)	49, 1419, 1708
SfaNI	GCATC	6 cut(s)	160, 172, 354, 539, 592, 682
SfcI	CTRYAG	3 cut(s)	203, 1098, 1680
SfiI	GGCCNNNNNGGCC	1 cut(s)	355
SfoI	GGCGCC	2 cut(s)	33, 69
Sfr274I	CTCGAG	1 cut(s)	1275
SinI	GGWCC	1 cut(s)	113
SlaI	CTCGAG	1 cut(s)	1275
SmiMI	CAYNNNNRTG	1 cut(s)	573
SmlI	CTYRAG	4 cut(s)	503, 749, 1036, 1275
SmoI	CTYRAG	4 cut(s)	503, 749, 1036, 1275
Sse9I	AATT	8 cut(s)	41, 53, 401, 481, 490, 534, 562, 615
SsiI	CCGC	7 cut(s)	106, 119, 122, 149, 157, 326, 900
SspDI	GGCGCC	2 cut(s)	31, 67
SspMI	CTAG	3 cut(s)	594, 657, 941
StyD4I	CCNGG	3 cut(s)	47, 1417, 1706
TaiI	ACGT	1 cut(s)	1186
TaqI	TCGA	1 cut(s)	1276
TaqII	GACCGA	1 cut(s)	973
TasI	AATT	8 cut(s)	41, 53, 401, 481, 490, 534, 562, 615
TatI	WGTACW	4 cut(s)	130, 455, 510, 756
TauI	GCSGC	3 cut(s)	122, 151, 902
TfiI	GAWTC	6 cut(s)	671, 680, 1342, 1516, 1581, 1676
Tru1I	TTAA	2 cut(s)	87, 1037
Tru9I	TTAA	2 cut(s)	87, 1037
TscAI	CASTG	1 cut(s)	1372
TseFI	GTSAC	8 cut(s)	183, 207, 213, 219, 225, 273, 1325, 1786
Tsp45I	GTSAC	8 cut(s)	183, 207, 213, 219, 225, 273, 1325, 1786
TspDTI	ATGAA	7 cut(s)	684, 845, 873, 981, 1355, 1458, 1566
TspGWI	ACGGA	2 cut(s)	73, 1556
TspRI	CASTG	1 cut(s)	1372
Vha464I	CTTAAG	1 cut(s)	1036
VpaK11BI	GGWCC	1 cut(s)	113
XapI	RAATTY	2 cut(s)	490, 534
XceI	RCATGY	1 cut(s)	886
XhoI	CTCGAG	1 cut(s)	1275
XmnI	GAANNNNTTC	1 cut(s)	1305
XspI	CTAG	3 cut(s)	594, 657, 941
ZrmI	AGTACT	2 cut(s)	457, 758
Zsp2I	ATGCAT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.