MD15G1096700.v1.1

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0009536
Physical Location & Seq
Forward (+)
6748593 .. 6753049
4457 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1096700.v1.1.491

Sequence Viewer

Length: 1824 bp
ATGTTCTGCCACGATTTACATATCAAAGATCTAATACTATTTTACTTAGTGAACAATGCTGAGAAACTCAAGGCATGTTTACATGCTACTATGTTGCAAGTAATGGTAACTGAAGGGTGTAAAACCCTAATCTCTCTTCTTCTCTCATCGTTTCTCTGCAGTGGCTGGGCTGAACGGCACATCCCTTCTCGACTCTCTCGACACTCGAATTCCCAACCAGCAGCAACCACAATGGCAGCATACGACTACGACGACGCAGGCACATACGACGAGACATCGGCGACGCAGCGCCAAACTTCGTCCGGAGCCCCGCCGTCTTCAGACCTCGGATACGACCCCAACTTCGTCCCCGACTCCGTAAAATCCTTCGTCGTCCACCTCTACCGCCACATCCGCGAGAAGAATGTCTATGAGATCCACCAGATGTACGAGACCTCGTTCCAGACCCTCTCCGATCGGCTCTTCAAGGACACCCCCTGGCCCTCCGTCGACGCCGTCGCCCATTACGTCGACAATGACCACGTCTTCTGCCTCCTTTATCGCGAGATGTGGTTCCGCCACCTCTACGCCCGCCTGTCCCCGACGCTGAAGCAGCGAATCGACTCCTGGGATAATTACTGCAGCCTCTTCCAGGTTGTCCTCCATGGCGTCGTTAATATGCAGCTGCCGAACCAGTGGCTTTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAGTACAGAGCTAAGATAAAGAACAAAACCGAGCAGGAGATTGCTCTGCTCAGGCAATTTGATCAGGCTTGGAATGTGTATGGTGTGCTTAACTTCTTGCAAGCTCTGGTTGAGAAGTCGATGATCATTCAGATTCTCGAGCAAGAGAAGGAAGGGCTCGAGCAGTTTACCGCCACTGATGGGTATGATTATAATGGTGGCAGTAATGTGTTGAAGGTGTTGGGGTATTTCAGCATGGTGGGTTTGCTTCGAGTTCATTGTCTTTTGGGCGATTATCATACCGGTCTGAAGTGCTTGCAGCCCATTGACATTACCCAACAAGGTGTTTTTACCACTGTTATTGGAAGCCACATTACCACCGTTTATCATTATGGTTTCGCCAATCTTATGCTGCGGAGGTATGTGGAAGCGATTCGGGAATTTAATAAGATTCTGTTATACATCTACAAGACCAAGCAGTACCATCAGAAATCTCCACAGTATGAGCAGATTCTGAAGAAGAATGAGCAGATGTATGCCCTGTTGGCAATTGCTCTTTCGCTATGCCCCCAAGTGAAGCTTGTTGAGGAAACTGTGAACTCTCAGTTGCGCGAGAAGTATGGTGAGAAAATGAACAGAATGCAGAGATACGACGATGAAGCCTTTGCTATTTATGATGAGCTCTTCTCCTACGCATGCCCTAAGTTCATTACCCCCTCCCCTCCAAGTTTTGAGGAGCCCCTTGTTAACTACAACCAGGACGCTTATAGACTTCAATTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAGTTATTATCAGGCGTCAGGACATTCTTAAAAGTCTATTCATCCATCTCCGTAGGAAAGCTCGCAAGCTACATGGAAGTGGATGAATCCAAGTTGAGGACAATCTTGTTGACATACAAGCACAAGACACATGCTGTTGATACTGAGGGAAAAGTTATCTCCAATGCTGATGTGGATTTCTATATTGACGATGACTTGATTTCTGTCGTCGAATCAAAACCAATAAAACGATATGGGGATTACTTCTTGCGACAAATCGTTAAGCTTGAAGGGGTGATCAATGATATGGACAGGGTAAAGCTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Paf67

Protein Analysis

608

Amino Acids

70.64

Weight (kDa)

6.11

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Paf67 PF10255 198 - 593 2.1e-152 RNA polymerase I-associated factor PAF67
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 918
AasI GACNNNNNNGTC 1 cut(s) 701
AccI GTMKAC 4 cut(s) 489, 510, 693, 705
AccII CGCG 3 cut(s) 396, 543, 1317
AccIII TCCGGA 1 cut(s) 302
AciI CCGC 7 cut(s) 311, 385, 394, 556, 571, 897, 1120
AclWI GGATC 1 cut(s) 409
AcsI RAATTY 2 cut(s) 208, 1145
AcuI CTGAAG 5 cut(s) 132, 303, 608, 1034, 1241
AcyI GRCGYC 3 cut(s) 492, 648, 1530
AfaI GTAC 3 cut(s) 428, 731, 1187
AfiI CCNNNNNNNGG 3 cut(s) 631, 906, 1611
AgeI ACCGGT 1 cut(s) 1007
AgsI TTSAA 5 cut(s) 466, 940, 1481, 1486, 1784
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 4 cut(s) 476, 605, 630, 1461
AloI GAACNNNNNNTCC 2 cut(s) 165, 197
Alw21I GWGCWC 1 cut(s) 1389
Alw26I GTCTC 2 cut(s) 266, 425
AlwI GGATC 1 cut(s) 409
AlwNI CAGNNNCTG 2 cut(s) 165, 1219
Ama87I CYCGRG 2 cut(s) 863, 884
Aor13HI TCCGGA 1 cut(s) 302
AoxI GGCC 1 cut(s) 479
ApoI RAATTY 2 cut(s) 208, 1145
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
AsiGI ACCGGT 1 cut(s) 1007
Asp700I GAANNNNTTC 2 cut(s) 1137, 1490
AspLEI GCGC 2 cut(s) 291, 1317
AspS9I GGNCC 1 cut(s) 480
AsuHPI GGTGA 2 cut(s) 1340, 1801
AvaI CYCGRG 2 cut(s) 863, 884
BanII GRGCYC 4 cut(s) 310, 885, 1389, 1446
BarI GAAGNNNNNNTAC 2 cut(s) 1063, 1095
BbsI GAAGAC 2 cut(s) 309, 517
Bbv12I GWGCWC 1 cut(s) 1389
BccI CCATC 3 cut(s) 899, 1197, 1568
BceAI ACGGC 3 cut(s) 191, 298, 479
BciT130I CCWGG 4 cut(s) 478, 607, 632, 1463
BciVI GTATCC 1 cut(s) 323
BclI TGATCA 3 cut(s) 787, 849, 1791
BcoDI GTCTC 2 cut(s) 266, 425
BfmI CTRYAG 2 cut(s) 157, 619
BfoI RGCGCY 1 cut(s) 292
BfuI GTATCC 1 cut(s) 323
BglI GCCNNNNNGGC 1 cut(s) 1250
BglII AGATCT 1 cut(s) 28
Bme1390I CCNGG 4 cut(s) 478, 607, 632, 1463
BmeT110I CYCGRG 2 cut(s) 863, 884
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 1 cut(s) 480
BmiI GGNNCC 3 cut(s) 307, 554, 1443
BmrFI CCNGG 4 cut(s) 478, 607, 632, 1463
BpiI GAAGAC 2 cut(s) 309, 517
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
Bpu10I CCTNAGC 1 cut(s) 776
BpuEI CTTGAG 1 cut(s) 53
BsaHI GRCGYC 3 cut(s) 492, 648, 1530
BsaI GGTCTC 1 cut(s) 425
BsaJI CCNNGG 4 cut(s) 325, 476, 606, 643
BsaWI WCCGGW 2 cut(s) 302, 1007
Bsc4I CCNNNNNNNGG 3 cut(s) 631, 906, 1611
Bse118I RCCGGY 1 cut(s) 1007
Bse1I ACTGG 3 cut(s) 673, 709, 727
BseAI TCCGGA 1 cut(s) 302
BseBI CCWGG 4 cut(s) 478, 607, 632, 1463
BseDI CCNNGG 4 cut(s) 325, 476, 606, 643
BseGI GGATG 4 cut(s) 180, 390, 1556, 1603
BseLI CCNNNNNNNGG 3 cut(s) 631, 906, 1611
BseMII CTCAG 4 cut(s) 51, 790, 1322, 1650
BseNI ACTGG 3 cut(s) 673, 709, 727
BseRI GAGGAG 1 cut(s) 1454
BseYI CCCAGC 1 cut(s) 165
Bsh1236I CGCG 3 cut(s) 396, 543, 1317
Bsh1285I CGRYCG 1 cut(s) 457
BshFI GGCC 1 cut(s) 481
BshTI ACCGGT 1 cut(s) 1007
BsiEI CGRYCG 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 1389
BsiHKCI CYCGRG 2 cut(s) 863, 884
BsiSI CCGG 2 cut(s) 303, 1008
BslFI GGGAC 3 cut(s) 332, 562, 698
BslI CCNNNNNNNGG 3 cut(s) 631, 906, 1611
BsmAI GTCTC 2 cut(s) 266, 425
BsmFI GGGAC 3 cut(s) 332, 562, 698
BsmI GAATGC 1 cut(s) 1350
BsnI GGCC 1 cut(s) 481
Bso31I GGTCTC 1 cut(s) 425
BsoBI CYCGRG 2 cut(s) 863, 884
Bsp1286I GDGCHC 4 cut(s) 310, 885, 1389, 1446
Bsp13I TCCGGA 1 cut(s) 302
Bsp143I GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
Bsp19I CCATGG 1 cut(s) 643
Bsp68I TCGCGA 1 cut(s) 543
BspACI CCGC 7 cut(s) 311, 385, 394, 556, 571, 897, 1120
BspANI GGCC 1 cut(s) 481
BspCNI CTCAG 4 cut(s) 52, 789, 1321, 1651
BspEI TCCGGA 1 cut(s) 302
BspFNI CGCG 3 cut(s) 396, 543, 1317
BspLI GGNNCC 3 cut(s) 307, 554, 1443
BspMAI CTGCAG 2 cut(s) 161, 623
BspPI GGATC 1 cut(s) 409
BspQI GCTCTTC 2 cut(s) 467, 1394
BspTNI GGTCTC 1 cut(s) 425
BsrFI RCCGGY 1 cut(s) 1007
BsrI ACTGG 3 cut(s) 673, 709, 727
BssAI RCCGGY 1 cut(s) 1007
BssECI CCNNGG 4 cut(s) 325, 476, 606, 643
BssMI GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
BssNI GRCGYC 3 cut(s) 492, 648, 1530
BssT1I CCWWGG 1 cut(s) 643
Bst2UI CCWGG 4 cut(s) 478, 607, 632, 1463
Bst4CI ACNGT 6 cut(s) 1063, 1087, 1206, 1300, 1491, 1518
Bst6I CTCTTC 4 cut(s) 141, 467, 632, 1394
BstACI GRCGYC 3 cut(s) 492, 648, 1530
BstC8I GCNNGC 7 cut(s) 259, 571, 828, 1022, 1402, 1578, 1582
BstDEI CTNAG 7 cut(s) 46, 60, 738, 776, 1308, 1407, 1659
BstDSI CCRYGG 1 cut(s) 643
BstENI CCTNNNNNAGG 1 cut(s) 629
BstF5I GGATG 4 cut(s) 180, 390, 1556, 1603
BstFNI CGCG 3 cut(s) 396, 543, 1317
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 2 cut(s) 291, 1317
BstKTI GATC 6 cut(s) 31, 417, 457, 790, 852, 1794
BstMAI GTCTC 2 cut(s) 266, 425
BstMBI GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
BstMCI CGRYCG 1 cut(s) 457
BstMWI GCNNNNNNNGC 3 cut(s) 393, 592, 1250
BstNI CCWGG 4 cut(s) 478, 607, 632, 1463
BstNSI RCATGY 4 cut(s) 78, 86, 1404, 1649
BstSCI CCNGG 4 cut(s) 476, 605, 630, 1461
BstSFI CTRYAG 2 cut(s) 157, 619
BstUI CGCG 3 cut(s) 396, 543, 1317
BstV2I GAAGAC 2 cut(s) 309, 517
BstX2I RGATCY 2 cut(s) 28, 414
BstYI RGATCY 2 cut(s) 28, 414
BsuI GTATCC 1 cut(s) 323
BsuRI GGCC 1 cut(s) 481
BtgI CCRYGG 1 cut(s) 643
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 4 cut(s) 180, 390, 1556, 1603
BtsI GCAGTG 1 cut(s) 166
BtsIMutI CAGTG 4 cut(s) 166, 680, 900, 1059
BtuMI TCGCGA 1 cut(s) 543
Cac8I GCNNGC 7 cut(s) 259, 571, 828, 1022, 1402, 1578, 1582
CaiI CAGNNNCTG 2 cut(s) 165, 1219
CfoI GCGC 2 cut(s) 291, 1317
Cfr10I RCCGGY 1 cut(s) 1007
Cfr13I GGNCC 1 cut(s) 480
CseI GACGC 7 cut(s) 263, 292, 500, 592, 637, 1475, 1519
Csp6I GTAC 3 cut(s) 427, 730, 1186
CspAI ACCGGT 1 cut(s) 1007
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviAII CATG 8 cut(s) 75, 83, 644, 688, 961, 1401, 1588, 1646
CviQI GTAC 3 cut(s) 427, 730, 1186
DdeI CTNAG 7 cut(s) 46, 60, 738, 776, 1308, 1407, 1659
DpnI GATC 6 cut(s) 30, 416, 456, 789, 851, 1793
DpnII GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
DrdI GACNNNNNNGTC 1 cut(s) 701
DseDI GACNNNNNNGTC 1 cut(s) 701
Eam1104I CTCTTC 4 cut(s) 141, 467, 632, 1394
EarI CTCTTC 4 cut(s) 141, 467, 632, 1394
EciI GGCGGA 1 cut(s) 545
Ecl136II GAGCTC 1 cut(s) 1387
Eco130I CCWWGG 1 cut(s) 643
Eco24I GRGCYC 4 cut(s) 310, 885, 1389, 1446
Eco31I GGTCTC 1 cut(s) 425
Eco53kI GAGCTC 1 cut(s) 1387
Eco57I CTGAAG 5 cut(s) 132, 303, 608, 1034, 1241
Eco88I CYCGRG 2 cut(s) 863, 884
EcoICRI GAGCTC 1 cut(s) 1387
EcoNI CCTNNNNNAGG 1 cut(s) 629
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 4 cut(s) 476, 605, 630, 1461
EcoT14I CCWWGG 1 cut(s) 643
EcoT38I GRGCYC 4 cut(s) 310, 885, 1389, 1446
ErhI CCWWGG 1 cut(s) 643
FaeI CATG 8 cut(s) 78, 86, 647, 691, 964, 1404, 1591, 1649
FalI AAGNNNNNCTT 2 cut(s) 1269, 1301
FaqI GGGAC 3 cut(s) 332, 562, 698
FatI CATG 8 cut(s) 74, 82, 643, 687, 960, 1400, 1587, 1645
FauI CCCGC 2 cut(s) 318, 578
FbaI TGATCA 3 cut(s) 787, 849, 1791
FblI GTMKAC 4 cut(s) 489, 510, 693, 705
FokI GGATG 4 cut(s) 167, 377, 1543, 1610
FriOI GRGCYC 4 cut(s) 310, 885, 1389, 1446
GlaI GCGC 2 cut(s) 290, 1316
GsaI CCCAGC 1 cut(s) 169
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 1 cut(s) 481
HapII CCGG 2 cut(s) 303, 1008
HgaI GACGC 7 cut(s) 263, 292, 500, 592, 637, 1475, 1519
HhaI GCGC 2 cut(s) 291, 1317
Hin1I GRCGYC 3 cut(s) 492, 648, 1530
Hin1II CATG 8 cut(s) 78, 86, 647, 691, 964, 1404, 1591, 1649
Hin6I GCGC 2 cut(s) 289, 1315
HinP1I GCGC 2 cut(s) 289, 1315
HincII GTYRAC 5 cut(s) 490, 511, 694, 1453, 1626
HindII GTYRAC 5 cut(s) 490, 511, 694, 1453, 1626
HindIII AAGCTT 3 cut(s) 1283, 1778, 1814
HpaI GTTAAC 1 cut(s) 1453
HpaII CCGG 2 cut(s) 303, 1008
HphI GGTGA 2 cut(s) 1340, 1801
Hpy188I TCNGA 7 cut(s) 322, 329, 454, 858, 1014, 1194, 1221
Hpy188III TCNNGA 9 cut(s) 189, 198, 303, 442, 542, 715, 863, 1142, 1534
HpyAV CCTTC 7 cut(s) 107, 195, 376, 868, 872, 934, 1778
HpyCH4III ACNGT 6 cut(s) 1063, 1087, 1206, 1300, 1491, 1518
HpyCH4IV ACGT 2 cut(s) 507, 522
HpyCH4V TGCA 7 cut(s) 97, 159, 621, 661, 826, 1024, 1348
HpyF10VI GCNNNNNNNGC 3 cut(s) 393, 592, 1250
HpyF3I CTNAG 7 cut(s) 46, 60, 738, 776, 1308, 1407, 1659
HpySE526I ACGT 2 cut(s) 507, 522
Hsp92I GRCGYC 3 cut(s) 492, 648, 1530
Hsp92II CATG 8 cut(s) 78, 86, 647, 691, 964, 1404, 1591, 1649
HspAI GCGC 2 cut(s) 289, 1315
Kpn2I TCCGGA 1 cut(s) 302
Ksp22I TGATCA 3 cut(s) 787, 849, 1791
KspAI GTTAAC 1 cut(s) 1453
Kzo9I GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
LguI GCTCTTC 2 cut(s) 467, 1394
LmnI GCTCC 2 cut(s) 305, 1441
MaeII ACGT 2 cut(s) 507, 522
MaeIII GTNAC 1 cut(s) 106
MalI GATC 6 cut(s) 30, 416, 456, 789, 851, 1793
MboI GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
MfeI CAATTG 2 cut(s) 1254, 1481
MflI RGATCY 2 cut(s) 28, 414
MhlI GDGCHC 4 cut(s) 310, 885, 1389, 1446
MluCI AATT 6 cut(s) 208, 613, 782, 1145, 1254, 1481
MlyI GAGTC 3 cut(s) 186, 347, 596
MroI TCCGGA 1 cut(s) 302
MroXI GAANNNNTTC 2 cut(s) 1137, 1490
MseI TTAA 6 cut(s) 654, 816, 1149, 1452, 1544, 1776
MslI CAYNNNNRTG 1 cut(s) 1592
MspA1I CMGCKG 1 cut(s) 664
MspI CCGG 2 cut(s) 303, 1008
MspR9I CCNGG 4 cut(s) 478, 607, 632, 1463
MunI CAATTG 2 cut(s) 1254, 1481
Mva1269I GAATGC 1 cut(s) 1350
MvaI CCWGG 4 cut(s) 478, 607, 632, 1463
MvnI CGCG 3 cut(s) 396, 543, 1317
MwoI GCNNNNNNNGC 3 cut(s) 393, 592, 1250
NcoI CCATGG 1 cut(s) 643
NdeII GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
NlaIII CATG 8 cut(s) 78, 86, 647, 691, 964, 1404, 1591, 1649
NlaIV GGNNCC 3 cut(s) 307, 554, 1443
NruI TCGCGA 1 cut(s) 543
NspI RCATGY 4 cut(s) 78, 86, 1404, 1649
PaeI GCATGC 1 cut(s) 1404
PaeR7I CTCGAG 2 cut(s) 863, 884
PciSI GCTCTTC 2 cut(s) 467, 1394
PcsI WCGNNNNNNNCGW 4 cut(s) 196, 249, 504, 699
PctI GAATGC 1 cut(s) 1350
PdmI GAANNNNTTC 2 cut(s) 1137, 1490
PfeI GAWTC 7 cut(s) 597, 859, 1138, 1156, 1216, 1601, 1727
PflFI GACNNNGTC 3 cut(s) 494, 521, 689
PinAI ACCGGT 1 cut(s) 1007
Ple19I CGATCG 1 cut(s) 457
PleI GAGTC 3 cut(s) 186, 347, 596
PpsI GAGTC 3 cut(s) 186, 347, 596
PsiI TTATAA 1 cut(s) 918
Psp124BI GAGCTC 1 cut(s) 1389
Psp6I CCWGG 4 cut(s) 476, 605, 630, 1461
PspFI CCCAGC 1 cut(s) 165
PspGI CCWGG 4 cut(s) 476, 605, 630, 1461
PspN4I GGNNCC 3 cut(s) 307, 554, 1443
PspPI GGNCC 1 cut(s) 480
PspXI VCTCGAGB 1 cut(s) 884
PstI CTGCAG 2 cut(s) 161, 623
PstNI CAGNNNCTG 2 cut(s) 165, 1219
PsuI RGATCY 2 cut(s) 28, 414
PsyI GACNNNGTC 3 cut(s) 494, 521, 689
PvuI CGATCG 1 cut(s) 457
PvuII CAGCTG 1 cut(s) 664
RruI TCGCGA 1 cut(s) 543
RsaI GTAC 3 cut(s) 428, 731, 1187
RsaNI GTAC 3 cut(s) 427, 730, 1186
RseI CAYNNNNRTG 1 cut(s) 1592
SacI GAGCTC 1 cut(s) 1389
SalI GTCGAC 3 cut(s) 488, 509, 692
SapI GCTCTTC 2 cut(s) 467, 1394
SaqAI TTAA 6 cut(s) 654, 816, 1149, 1452, 1544, 1776
Sau3AI GATC 6 cut(s) 28, 414, 454, 787, 849, 1791
Sau96I GGNCC 1 cut(s) 480
SchI GAGTC 3 cut(s) 186, 347, 596
ScrFI CCNGG 4 cut(s) 478, 607, 632, 1463
SduI GDGCHC 4 cut(s) 310, 885, 1389, 1446
SfcI CTRYAG 2 cut(s) 157, 619
Sfr274I CTCGAG 2 cut(s) 863, 884
SgrDI CGTCGACG 1 cut(s) 488
SlaI CTCGAG 2 cut(s) 863, 884
SmiMI CAYNNNNRTG 1 cut(s) 1592
SmlI CTYRAG 3 cut(s) 68, 863, 884
SmoI CTYRAG 3 cut(s) 68, 863, 884
SphI GCATGC 1 cut(s) 1404
Sse9I AATT 6 cut(s) 208, 613, 782, 1145, 1254, 1481
SsiI CCGC 7 cut(s) 311, 385, 394, 556, 571, 897, 1120
SstI GAGCTC 1 cut(s) 1389
StyD4I CCNGG 4 cut(s) 476, 605, 630, 1461
StyI CCWWGG 1 cut(s) 643
TaaI ACNGT 6 cut(s) 1063, 1087, 1206, 1300, 1491, 1518
TaiI ACGT 2 cut(s) 510, 525
TasI AATT 6 cut(s) 208, 613, 782, 1145, 1254, 1481
TatI WGTACW 1 cut(s) 729
TfiI GAWTC 7 cut(s) 597, 859, 1138, 1156, 1216, 1601, 1727
Tru1I TTAA 6 cut(s) 654, 816, 1149, 1452, 1544, 1776
Tru9I TTAA 6 cut(s) 654, 816, 1149, 1452, 1544, 1776
TscAI CASTG 4 cut(s) 166, 680, 907, 1066
TspDTI ATGAA 7 cut(s) 971, 1352, 1377, 1402, 1515, 1545, 1614
TspGWI ACGGA 3 cut(s) 346, 475, 1555
TspRI CASTG 4 cut(s) 166, 680, 907, 1066
Tth111I GACNNNGTC 3 cut(s) 494, 521, 689
XagI CCTNNNNNAGG 1 cut(s) 629
XapI RAATTY 2 cut(s) 208, 1145
XceI RCATGY 4 cut(s) 78, 86, 1404, 1649
XcmI CCANNNNNNNNNTGG 1 cut(s) 1684
XhoI CTCGAG 2 cut(s) 863, 884
XmiI GTMKAC 4 cut(s) 489, 510, 693, 705
XmnI GAANNNNTTC 2 cut(s) 1137, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.