RchiOBHm_Chr6g0305871

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0009536
Physical Location & Seq
Reverse (-)
64696334 .. 64700378
4045 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27489

Sequence Viewer

Length: 1578 bp
ATGGCGGCCTACGACTACGACGAGCCCTCGGCGACTCACCGCCCAGCCTCCTCCGACGCGCCGTCGCAGGAGCCCGGGTACGACCCGAACCACGTCCCTGACTCCGTCAAATCCTTCGTCGTCCATCTGTACCGCCACATCCGCGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGACTTCCTTCCAGGGCATATCGGAGCGCCTCTTCAAGGACACGCCGTGGCCCTCCGTCGACGCCGTCGCGCACCACGTCGACAACGACCACGTGTTCTGCCTCCTGTACCGTGAGATGTGGTTCCGCCACCTCTACGCCAGGCTCCAGCCGACGCTGAAGCAGAGAATCGACTCCTGGGACAATTACTGTAGCCTTTTTCAGGTGGTTCTGCACGGCGTGGTCAATATGCAGCTGCCGAATCAGTGGCTGTGGGACATGGTGGATGAGTTTGTGTACCAGTTTCAGAGCTTCTGTCAGTATCGGGCTAAGATGAAGAACAAGACTGAGCAGGAGATTGCTCTTCTCAGGCAGTTTGATCAAGCTTGGAATGTGTACGGTGTGCTTAACTTTTTGCAAGCTCTGGTGGAGAAGTCTGCGATTATTCAGATTCTCGAGCATGAGAAGGAAGGGCTGGAGCAATTTACTGCCACGGATGGGTATGATTATAGTGGCGGCAGTAATGTCTTGAAGGTGTTGGGGTATTTCAGTATGGTGGGGTTGCTGCGAGTGCATTGTCTTTTGGGTGATTATCATACTGGTCTGAAATGCTTGCAACCCATTGACATTACTCAGCAAGGTGTTTACACCAGTGTGATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGCGGAGGTATGTGGAGGCAATTCGTGAATTCAATAAGATTCTACTGTACATCTATAAGACCAAGCAATATCATCAGAAATCTCCTCAGTATGAGCAGATACTAAAGAAGAATGAGCAGATGTATGCATTGTTGGCAATTAGCCTTTCACTATGTCCCCAGGTTAAGCTTGTTGAAGAAACAGTGAATTCTCAGTTGCGTGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAAGCATTTGCTATCTATGATGAGCTCTTCTCCTATGCATGTCCTAAGTTCATTACTCCATCTGCTCCAAGTTTTGAGGAGCCTCTTGTTAATTACAACCAGATATGTGATGCATATAGACTTCAGTTGAAACTTTTCCTTTATGAAGTGAAGCAGCAACAGTTATTATCAGGTGTTAGGACCTTCTTAAAAGTCTATTCATCCATCTCTCTTGGGAACCTTGCGAAGTACATGGAAGTGGATGAATCCAAGTTGAGGACTATCTTGCTGACATACAAACACAAGACACATGCGGTTGACACTGATGGAAAAACCATTTCCAATGCTGATGTGGATTTTTATATGAACGATGATTGGGTTTATGTTGTTGACTCGAAACCACCAAAACGATATGGGGATTACTTCTTGCGTCAGATAGTGAAGCTTGAAGGGGCAATCAACGATCTGGACAGGATAAAGCTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Paf67

Protein Analysis

525

Amino Acids

61.58

Weight (kDa)

6.07

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Paf67 PF10255 114 - 511 2.2e-148 RNA polymerase I-associated factor PAF67
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 237, 258
AccII CGCG 3 cut(s) 59, 144, 248
AciI CCGC 8 cut(s) 5, 40, 133, 142, 304, 672, 868, 1403
AclWI GGATC 1 cut(s) 157
AcsI RAATTY 2 cut(s) 893, 1051
AcuI CTGAAG 2 cut(s) 356, 1217
AcvI CACGTG 1 cut(s) 271
AcyI GRCGYC 1 cut(s) 240
AdeI CACNNNGTG 2 cut(s) 225, 397
AfaI GTAC 9 cut(s) 80, 131, 158, 176, 287, 455, 554, 914, 1340
AfiI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1365
AflIII ACRYGT 2 cut(s) 153, 270
AgsI TTSAA 6 cut(s) 214, 688, 898, 1040, 1240, 1538
AhdI GACNNNNNGTC 1 cut(s) 61
AjiI CACGTC 2 cut(s) 94, 256
AjnI CCWGG 4 cut(s) 189, 317, 353, 1023
AleI CACNNNNGTG 1 cut(s) 809
AluBI AGCT 8 cut(s) 412, 468, 542, 578, 1033, 1135, 1534, 1570
AluI AGCT 8 cut(s) 412, 468, 542, 578, 1033, 1135, 1534, 1570
Alw21I GWGCWC 1 cut(s) 1137
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 1 cut(s) 157
AlwNI CAGNNNCTG 1 cut(s) 427
Ama87I CYCGRG 2 cut(s) 74, 611
AoxI GGCC 2 cut(s) 6, 227
ApeKI GCWGC 4 cut(s) 409, 412, 721, 1264
ApoI RAATTY 2 cut(s) 893, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
Asp700I GAANNNNTTC 1 cut(s) 1244
AspLEI GCGC 3 cut(s) 61, 207, 250
AspS9I GGNCC 2 cut(s) 228, 1290
AsuC2I CCSGG 2 cut(s) 75, 76
AsuHPI GGTGA 3 cut(s) 29, 755, 1088
AvaI CYCGRG 2 cut(s) 74, 611
AvaII GGWCC 1 cut(s) 1290
BanII GRGCYC 3 cut(s) 27, 75, 1137
BarI GAAGNNNNNNTAC 4 cut(s) 140, 172, 811, 843
BbrPI CACGTG 1 cut(s) 271
Bbv12I GWGCWC 1 cut(s) 1137
BbvI GCAGC 4 cut(s) 399, 421, 708, 1276
BccI CCATC 5 cut(s) 132, 647, 1177, 1322, 1409
BceAI ACGGC 4 cut(s) 46, 208, 227, 409
BciT130I CCWGG 4 cut(s) 191, 319, 355, 1025
BclI TGATCA 1 cut(s) 535
BcnI CCSGG 2 cut(s) 75, 76
BcoDI GTCTC 1 cut(s) 173
BfmI CTRYAG 1 cut(s) 367
BfoI RGCGCY 1 cut(s) 208
BisI GCNGC 6 cut(s) 6, 410, 413, 673, 722, 1265
BlsI GCNGC 6 cut(s) 7, 411, 414, 674, 723, 1266
Bme1390I CCNGG 6 cut(s) 75, 76, 191, 319, 355, 1025
Bme18I GGWCC 1 cut(s) 1290
BmeRI GACNNNNNGTC 1 cut(s) 61
BmeT110I CYCGRG 2 cut(s) 74, 611
BmgBI CACGTC 2 cut(s) 94, 256
BmgT120I GGNCC 2 cut(s) 228, 1290
BmiI GGNNCC 5 cut(s) 72, 302, 323, 1191, 1328
BmrFI CCNGG 6 cut(s) 75, 76, 191, 319, 355, 1025
BmsI GCATC 1 cut(s) 1210
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 2 cut(s) 308, 653
BpuMI CCSGG 2 cut(s) 75, 76
BsaAI YACGTR 1 cut(s) 271
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 7 cut(s) 27, 74, 190, 224, 354, 648, 1023
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1365
Bse1I ACTGG 3 cut(s) 457, 760, 807
BseBI CCWGG 4 cut(s) 191, 319, 355, 1025
BseDI CCNNGG 7 cut(s) 27, 74, 190, 224, 354, 648, 1023
BseGI GGATG 5 cut(s) 138, 448, 658, 1310, 1357
BseLI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1365
BseMII CTCAG 5 cut(s) 495, 538, 803, 965, 1070
BseNI ACTGG 3 cut(s) 457, 760, 807
BseRI GAGGAG 3 cut(s) 40, 939, 1202
BseXI GCAGC 4 cut(s) 399, 421, 708, 1276
BseYI CCCAGC 1 cut(s) 43
BsgI GTGCAG 1 cut(s) 374
Bsh1236I CGCG 3 cut(s) 59, 144, 248
BshFI GGCC 2 cut(s) 8, 229
BsiHKAI GWGCWC 1 cut(s) 1137
BsiHKCI CYCGRG 2 cut(s) 74, 611
BsiSI CCGG 1 cut(s) 75
BslFI GGGAC 4 cut(s) 80, 371, 446, 1005
BslI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1365
BsmAI GTCTC 1 cut(s) 173
BsmFI GGGAC 4 cut(s) 80, 371, 446, 1005
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 2 cut(s) 8, 229
BsoBI CYCGRG 2 cut(s) 74, 611
Bsp1286I GDGCHC 3 cut(s) 27, 75, 1137
Bsp1407I TGTACA 1 cut(s) 912
Bsp143I GATC 3 cut(s) 162, 535, 1552
BspACI CCGC 8 cut(s) 5, 40, 133, 142, 304, 672, 868, 1403
BspANI GGCC 2 cut(s) 8, 229
BspCNI CTCAG 5 cut(s) 496, 537, 802, 964, 1069
BspFNI CGCG 3 cut(s) 59, 144, 248
BspLI GGNNCC 5 cut(s) 72, 302, 323, 1191, 1328
BspPI GGATC 1 cut(s) 157
BspQI GCTCTTC 2 cut(s) 525, 1142
BsrGI TGTACA 1 cut(s) 912
BsrI ACTGG 3 cut(s) 457, 760, 807
BssECI CCNNGG 7 cut(s) 27, 74, 190, 224, 354, 648, 1023
BssMI GATC 3 cut(s) 162, 535, 1552
BssNI GRCGYC 1 cut(s) 240
Bst2UI CCWGG 4 cut(s) 191, 319, 355, 1025
Bst4CI ACNGT 6 cut(s) 290, 368, 557, 912, 1048, 1272
Bst6I CTCTTC 3 cut(s) 215, 525, 1142
BstACI GRCGYC 1 cut(s) 240
BstAUI TGTACA 1 cut(s) 912
BstBAI YACGTR 1 cut(s) 271
BstC8I GCNNGC 2 cut(s) 576, 770
BstDEI CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
BstDSI CCRYGG 2 cut(s) 224, 648
BstENI CCTNNNNNAGG 2 cut(s) 212, 377
BstF5I GGATG 5 cut(s) 138, 448, 658, 1310, 1357
BstFNI CGCG 3 cut(s) 59, 144, 248
BstH2I RGCGCY 1 cut(s) 208
BstHHI GCGC 3 cut(s) 61, 207, 250
BstKTI GATC 3 cut(s) 165, 538, 1555
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 3 cut(s) 162, 535, 1552
BstMWI GCNNNNNNNGC 3 cut(s) 141, 727, 998
BstNI CCWGG 4 cut(s) 191, 319, 355, 1025
BstNSI RCATGY 2 cut(s) 1152, 1403
BstSCI CCNGG 6 cut(s) 73, 74, 189, 317, 353, 1023
BstSFI CTRYAG 1 cut(s) 367
BstUI CGCG 3 cut(s) 59, 144, 248
BstV1I GCAGC 4 cut(s) 399, 421, 708, 1276
BstX2I RGATCY 1 cut(s) 162
BstYI RGATCY 1 cut(s) 162
BsuRI GGCC 2 cut(s) 8, 229
BtgI CCRYGG 2 cut(s) 224, 648
BtrI CACGTC 2 cut(s) 94, 256
BtsCI GGATG 5 cut(s) 138, 448, 658, 1310, 1357
BtsIMutI CAGTG 4 cut(s) 428, 814, 1053, 1410
Cac8I GCNNGC 2 cut(s) 576, 770
CaiI CAGNNNCTG 1 cut(s) 427
CfoI GCGC 3 cut(s) 61, 207, 250
Cfr13I GGNCC 2 cut(s) 228, 1290
Cfr9I CCCGGG 1 cut(s) 74
CseI GACGC 4 cut(s) 65, 248, 340, 1508
Csp6I GTAC 9 cut(s) 79, 130, 157, 175, 286, 454, 553, 913, 1339
CviAII CATG 5 cut(s) 436, 617, 1149, 1342, 1400
CviQI GTAC 9 cut(s) 79, 130, 157, 175, 286, 454, 553, 913, 1339
DdeI CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
DpnI GATC 3 cut(s) 164, 537, 1554
DpnII GATC 3 cut(s) 162, 535, 1552
DraIII CACNNNGTG 2 cut(s) 225, 397
DriI GACNNNNNGTC 1 cut(s) 61
Eam1104I CTCTTC 3 cut(s) 215, 525, 1142
Eam1105I GACNNNNNGTC 1 cut(s) 61
EarI CTCTTC 3 cut(s) 215, 525, 1142
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 1135
Eco24I GRGCYC 3 cut(s) 27, 75, 1137
Eco47I GGWCC 1 cut(s) 1290
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 2 cut(s) 356, 1217
Eco72I CACGTG 1 cut(s) 271
Eco88I CYCGRG 2 cut(s) 74, 611
EcoICRI GAGCTC 1 cut(s) 1135
EcoNI CCTNNNNNAGG 2 cut(s) 212, 377
EcoO109I RGGNCCY 1 cut(s) 1290
EcoRI GAATTC 2 cut(s) 893, 1051
EcoRII CCWGG 4 cut(s) 189, 317, 353, 1023
EcoT22I ATGCAT 3 cut(s) 994, 1150, 1225
EcoT38I GRGCYC 3 cut(s) 27, 75, 1137
FaeI CATG 5 cut(s) 439, 620, 1152, 1345, 1403
FaqI GGGAC 4 cut(s) 80, 371, 446, 1005
FatI CATG 5 cut(s) 435, 616, 1148, 1341, 1399
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 2 cut(s) 237, 258
Fnu4HI GCNGC 6 cut(s) 6, 410, 413, 673, 722, 1265
FokI GGATG 5 cut(s) 125, 455, 665, 1297, 1364
FriOI GRGCYC 3 cut(s) 27, 75, 1137
Fsp4HI GCNGC 6 cut(s) 6, 410, 413, 673, 722, 1265
GlaI GCGC 3 cut(s) 60, 206, 249
GluI GCNGC 6 cut(s) 6, 410, 413, 673, 722, 1265
GsaI CCCAGC 1 cut(s) 47
GsuI CTGGAG 2 cut(s) 308, 653
HaeII RGCGCY 1 cut(s) 208
HaeIII GGCC 2 cut(s) 8, 229
HapII CCGG 1 cut(s) 75
HgaI GACGC 4 cut(s) 65, 248, 340, 1508
HhaI GCGC 3 cut(s) 61, 207, 250
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 5 cut(s) 439, 620, 1152, 1345, 1403
Hin6I GCGC 3 cut(s) 59, 205, 248
HinP1I GCGC 3 cut(s) 59, 205, 248
HincII GTYRAC 4 cut(s) 238, 259, 1408, 1480
HindII GTYRAC 4 cut(s) 238, 259, 1408, 1480
HindIII AAGCTT 3 cut(s) 540, 1031, 1532
HinfI GANTC 9 cut(s) 34, 101, 345, 350, 418, 607, 904, 1355, 1481
HpaII CCGG 1 cut(s) 75
HphI GGTGA 3 cut(s) 29, 755, 1088
Hpy166II GTNNAC 8 cut(s) 157, 238, 259, 454, 553, 802, 1408, 1480
Hpy188I TCNGA 7 cut(s) 55, 202, 465, 606, 762, 942, 1524
Hpy188III TCNNGA 4 cut(s) 611, 685, 890, 1556
Hpy8I GTNNAC 8 cut(s) 157, 238, 259, 454, 553, 802, 1408, 1480
Hpy99I CGWCG 9 cut(s) 23, 59, 67, 122, 239, 242, 248, 260, 334
HpyAV CCTTC 7 cut(s) 124, 196, 616, 620, 682, 1303, 1532
HpyCH4III ACNGT 6 cut(s) 290, 368, 557, 912, 1048, 1272
HpyCH4IV ACGT 4 cut(s) 93, 153, 255, 270
HpyCH4V TGCA 9 cut(s) 391, 409, 574, 730, 772, 992, 1096, 1148, 1223
HpyF10VI GCNNNNNNNGC 3 cut(s) 141, 727, 998
HpyF3I CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
HpySE526I ACGT 4 cut(s) 93, 153, 255, 270
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 5 cut(s) 439, 620, 1152, 1345, 1403
HspAI GCGC 3 cut(s) 59, 205, 248
Ksp22I TGATCA 1 cut(s) 535
Kzo9I GATC 3 cut(s) 162, 535, 1552
LguI GCTCTTC 2 cut(s) 525, 1142
LmnI GCTCC 6 cut(s) 70, 202, 327, 634, 1180, 1189
Lsp1109I GCAGC 4 cut(s) 399, 421, 708, 1276
LweI GCATC 1 cut(s) 1210
MaeII ACGT 4 cut(s) 93, 153, 255, 270
MalI GATC 3 cut(s) 164, 537, 1554
MboI GATC 3 cut(s) 162, 535, 1552
MboII GAAGA 7 cut(s) 160, 202, 505, 512, 985, 1052, 1129
MflI RGATCY 1 cut(s) 162
MhlI GDGCHC 3 cut(s) 27, 75, 1137
MluCI AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
MlyI GAGTC 4 cut(s) 28, 95, 344, 1475
MmeI TCCRAC 1 cut(s) 78
Mph1103I ATGCAT 3 cut(s) 994, 1150, 1225
MroXI GAANNNNTTC 1 cut(s) 1244
MseI TTAA 4 cut(s) 564, 1029, 1200, 1298
MslI CAYNNNNRTG 2 cut(s) 809, 1346
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 1 cut(s) 75
MspR9I CCNGG 6 cut(s) 75, 76, 191, 319, 355, 1025
Mva1269I GAATGC 1 cut(s) 1098
MvaI CCWGG 4 cut(s) 191, 319, 355, 1025
MvnI CGCG 3 cut(s) 59, 144, 248
MwoI GCNNNNNNNGC 3 cut(s) 141, 727, 998
NciI CCSGG 2 cut(s) 75, 76
NdeII GATC 3 cut(s) 162, 535, 1552
NlaIII CATG 5 cut(s) 439, 620, 1152, 1345, 1403
NlaIV GGNNCC 5 cut(s) 72, 302, 323, 1191, 1328
NmeAIII GCCGAG 1 cut(s) 8
NsiI ATGCAT 3 cut(s) 994, 1150, 1225
NspI RCATGY 2 cut(s) 1152, 1403
OliI CACNNNNGTG 1 cut(s) 809
PaeR7I CTCGAG 1 cut(s) 611
PciSI GCTCTTC 2 cut(s) 525, 1142
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 252, 261
PctI GAATGC 1 cut(s) 1098
PdmI GAANNNNTTC 1 cut(s) 1244
PfeI GAWTC 5 cut(s) 345, 418, 607, 904, 1355
PflFI GACNNNGTC 2 cut(s) 104, 242
PkrI GCNGC 6 cut(s) 7, 411, 414, 674, 723, 1266
PleI GAGTC 4 cut(s) 28, 95, 344, 1475
PmaCI CACGTG 1 cut(s) 271
PmlI CACGTG 1 cut(s) 271
PpsI GAGTC 4 cut(s) 28, 95, 344, 1475
Ppu21I YACGTR 1 cut(s) 271
PpuMI RGGWCCY 1 cut(s) 1290
Psp124BI GAGCTC 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 1290
Psp6I CCWGG 4 cut(s) 189, 317, 353, 1023
PspCI CACGTG 1 cut(s) 271
PspFI CCCAGC 1 cut(s) 43
PspGI CCWGG 4 cut(s) 189, 317, 353, 1023
PspN4I GGNNCC 5 cut(s) 72, 302, 323, 1191, 1328
PspPI GGNCC 2 cut(s) 228, 1290
PspPPI RGGWCCY 1 cut(s) 1290
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 1 cut(s) 162
PsyI GACNNNGTC 2 cut(s) 104, 242
PvuII CAGCTG 1 cut(s) 412
RsaI GTAC 9 cut(s) 80, 131, 158, 176, 287, 455, 554, 914, 1340
RsaNI GTAC 9 cut(s) 79, 130, 157, 175, 286, 454, 553, 913, 1339
RseI CAYNNNNRTG 2 cut(s) 809, 1346
SacI GAGCTC 1 cut(s) 1137
SalI GTCGAC 2 cut(s) 236, 257
SapI GCTCTTC 2 cut(s) 525, 1142
SaqAI TTAA 4 cut(s) 564, 1029, 1200, 1298
SatI GCNGC 6 cut(s) 6, 410, 413, 673, 722, 1265
Sau3AI GATC 3 cut(s) 162, 535, 1552
Sau96I GGNCC 2 cut(s) 228, 1290
SchI GAGTC 4 cut(s) 28, 95, 344, 1475
ScrFI CCNGG 6 cut(s) 75, 76, 191, 319, 355, 1025
SduI GDGCHC 3 cut(s) 27, 75, 1137
SfaNI GCATC 1 cut(s) 1210
SfcI CTRYAG 1 cut(s) 367
Sfr274I CTCGAG 1 cut(s) 611
SgrDI CGTCGACG 1 cut(s) 236
SinI GGWCC 1 cut(s) 1290
SlaI CTCGAG 1 cut(s) 611
SmaI CCCGGG 1 cut(s) 76
SmiMI CAYNNNNRTG 2 cut(s) 809, 1346
SmlI CTYRAG 1 cut(s) 611
SmoI CTYRAG 1 cut(s) 611
Sse9I AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
SsiI CCGC 8 cut(s) 5, 40, 133, 142, 304, 672, 868, 1403
SstI GAGCTC 1 cut(s) 1137
StyD4I CCNGG 6 cut(s) 73, 74, 189, 317, 353, 1023
TaaI ACNGT 6 cut(s) 290, 368, 557, 912, 1048, 1272
TaiI ACGT 4 cut(s) 96, 156, 258, 273
TaqI TCGA 5 cut(s) 237, 258, 348, 612, 1484
TasI AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
TatI WGTACW 2 cut(s) 912, 1338
TauI GCSGC 2 cut(s) 8, 675
TfiI GAWTC 5 cut(s) 345, 418, 607, 904, 1355
Tru1I TTAA 4 cut(s) 564, 1029, 1200, 1298
Tru9I TTAA 4 cut(s) 564, 1029, 1200, 1298
TscAI CASTG 4 cut(s) 428, 814, 1053, 1417
TseI GCWGC 4 cut(s) 409, 412, 721, 1264
TspDTI ATGAA 7 cut(s) 506, 1125, 1150, 1269, 1299, 1368, 1469
TspGWI ACGGA 3 cut(s) 94, 223, 665
TspMI CCCGGG 1 cut(s) 74
TspRI CASTG 4 cut(s) 428, 814, 1053, 1417
Tth111I GACNNNGTC 2 cut(s) 104, 242
VpaK11BI GGWCC 1 cut(s) 1290
XagI CCTNNNNNAGG 2 cut(s) 212, 377
XapI RAATTY 2 cut(s) 893, 1051
XceI RCATGY 2 cut(s) 1152, 1403
XcmI CCANNNNNNNNNTGG 1 cut(s) 1438
XhoI CTCGAG 1 cut(s) 611
XmaI CCCGGG 1 cut(s) 74
XmiI GTMKAC 2 cut(s) 237, 258
XmnI GAANNNNTTC 1 cut(s) 1244
Zsp2I ATGCAT 3 cut(s) 994, 1150, 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.