component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25754 AT5G25757 |
| fragaria_vesca | FvH4_2g36000 FvH4_2g36000 FvH4_2g36000 FvH4_2g36000 |
| malus_domestica | MD08G1117100.v1.1 MD15G1096700.v1.1 |
| prunus_persica | Prupe.1G451600_v2.0.a1 |
| pyrus_communis | pycom08g09770 pycom15g08880 |
| rosa_chinensis | RchiOBHm_Chr6g0305871 |
| rosa_laevigata | RLG00000010851 |
| rosa_multiflora | Rmu_sc0001809.1_g000044 Rmu_sc0032608.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00162260 |
| rosa_rugosa | Rorug06G0344500 |
| rosa_samantha | Rh6AG456300 Rh6BG444900 Rh6CG470300 Rh6DG457000 |
| rosa_wichuraiana | Rw6G039810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 846 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 629 |
| AccI | GTMKAC | 4 cut(s) | 417, 438, 621, 633 |
| AccII | CGCG | 2 cut(s) | 324, 471 |
| AccIII | TCCGGA | 1 cut(s) | 230 |
| AciI | CCGC | 8 cut(s) | 239, 313, 322, 469, 484, 499, 825, 1048 |
| AclWI | GGATC | 1 cut(s) | 337 |
| AcsI | RAATTY | 2 cut(s) | 136, 1073 |
| AcuI | CTGAAG | 4 cut(s) | 231, 536, 962, 1169 |
| AcyI | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| AfaI | GTAC | 2 cut(s) | 356, 659 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 559, 834, 1539 |
| AflIII | ACRYGT | 1 cut(s) | 35 |
| AgeI | ACCGGT | 1 cut(s) | 935 |
| AgsI | TTSAA | 4 cut(s) | 394, 868, 1409, 1414 |
| AjiI | CACGTC | 2 cut(s) | 451, 1615 |
| AjnI | CCWGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| AluBI | AGCT | 8 cut(s) | 592, 648, 665, 758, 1213, 1315, 1504, 1512 |
| AluI | AGCT | 8 cut(s) | 592, 648, 665, 758, 1213, 1315, 1504, 1512 |
| Alw21I | GWGCWC | 1 cut(s) | 1317 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AlwI | GGATC | 1 cut(s) | 337 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 84, 1147 |
| Ama87I | CYCGRG | 1 cut(s) | 812 |
| Aor13HI | TCCGGA | 1 cut(s) | 230 |
| AoxI | GGCC | 1 cut(s) | 407 |
| ApoI | RAATTY | 2 cut(s) | 136, 1073 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 254, 286 |
| AsiGI | ACCGGT | 1 cut(s) | 935 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 10, 1065, 1418 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| AspS9I | GGNCC | 2 cut(s) | 408, 1464 |
| AsuHPI | GGTGA | 2 cut(s) | 1219, 1268 |
| AvaI | CYCGRG | 1 cut(s) | 812 |
| AvaII | GGWCC | 1 cut(s) | 1464 |
| BanII | GRGCYC | 4 cut(s) | 238, 813, 1317, 1374 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 991, 1023 |
| BbsI | GAAGAC | 2 cut(s) | 237, 445 |
| Bbv12I | GWGCWC | 1 cut(s) | 1317 |
| BccI | CCATC | 4 cut(s) | 383, 827, 1125, 1496 |
| BceAI | ACGGC | 3 cut(s) | 110, 226, 407 |
| BciT130I | CCWGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| BciVI | GTATCC | 1 cut(s) | 251 |
| BclI | TGATCA | 2 cut(s) | 715, 777 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfmI | CTRYAG | 2 cut(s) | 76, 547 |
| BfoI | RGCGCY | 1 cut(s) | 220 |
| BfuI | GTATCC | 1 cut(s) | 251 |
| Bme1390I | CCNGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| Bme18I | GGWCC | 1 cut(s) | 1464 |
| BmeT110I | CYCGRG | 1 cut(s) | 812 |
| BmgBI | CACGTC | 2 cut(s) | 451, 1615 |
| BmgT120I | GGNCC | 2 cut(s) | 408, 1464 |
| BmiI | GGNNCC | 3 cut(s) | 235, 482, 1371 |
| BmrFI | CCNGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| BpiI | GAAGAC | 2 cut(s) | 237, 445 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1304, 1336 |
| Bpu10I | CCTNAGC | 1 cut(s) | 704 |
| BpuEI | CTTGAG | 1 cut(s) | 812 |
| BsaHI | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| BsaJI | CCNNGG | 5 cut(s) | 253, 404, 534, 571, 1203 |
| BsaWI | WCCGGW | 2 cut(s) | 230, 935 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 559, 834, 1539 |
| Bse118I | RCCGGY | 1 cut(s) | 935 |
| Bse1I | ACTGG | 3 cut(s) | 601, 637, 655 |
| BseAI | TCCGGA | 1 cut(s) | 230 |
| BseBI | CCWGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| BseDI | CCNNGG | 5 cut(s) | 253, 404, 534, 571, 1203 |
| BseGI | GGATG | 2 cut(s) | 1484, 1531 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 559, 834, 1539 |
| BseMII | CTCAG | 3 cut(s) | 718, 1250, 1578 |
| BseNI | ACTGG | 3 cut(s) | 601, 637, 655 |
| BseRI | GAGGAG | 4 cut(s) | 47, 50, 452, 1382 |
| BseYI | CCCAGC | 1 cut(s) | 84 |
| Bsh1236I | CGCG | 2 cut(s) | 324, 471 |
| Bsh1285I | CGRYCG | 1 cut(s) | 385 |
| BshFI | GGCC | 1 cut(s) | 409 |
| BshTI | ACCGGT | 1 cut(s) | 935 |
| BsiEI | CGRYCG | 1 cut(s) | 385 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1317 |
| BsiHKCI | CYCGRG | 1 cut(s) | 812 |
| BsiSI | CCGG | 2 cut(s) | 231, 936 |
| BslFI | GGGAC | 4 cut(s) | 260, 490, 551, 626 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 559, 834, 1539 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsmFI | GGGAC | 4 cut(s) | 260, 490, 551, 626 |
| BsmI | GAATGC | 1 cut(s) | 1278 |
| BsnI | GGCC | 1 cut(s) | 409 |
| BsoBI | CYCGRG | 1 cut(s) | 812 |
| Bsp1286I | GDGCHC | 4 cut(s) | 238, 813, 1317, 1374 |
| Bsp13I | TCCGGA | 1 cut(s) | 230 |
| Bsp143I | GATC | 4 cut(s) | 342, 382, 715, 777 |
| Bsp19I | CCATGG | 1 cut(s) | 571 |
| BspACI | CCGC | 8 cut(s) | 239, 313, 322, 469, 484, 499, 825, 1048 |
| BspANI | GGCC | 1 cut(s) | 409 |
| BspCNI | CTCAG | 3 cut(s) | 717, 1249, 1579 |
| BspEI | TCCGGA | 1 cut(s) | 230 |
| BspFNI | CGCG | 2 cut(s) | 324, 471 |
| BspLI | GGNNCC | 3 cut(s) | 235, 482, 1371 |
| BspMAI | CTGCAG | 2 cut(s) | 80, 551 |
| BspPI | GGATC | 1 cut(s) | 337 |
| BspQI | GCTCTTC | 2 cut(s) | 395, 1322 |
| BsrFI | RCCGGY | 1 cut(s) | 935 |
| BsrI | ACTGG | 3 cut(s) | 601, 637, 655 |
| BssAI | RCCGGY | 1 cut(s) | 935 |
| BssECI | CCNNGG | 5 cut(s) | 253, 404, 534, 571, 1203 |
| BssMI | GATC | 4 cut(s) | 342, 382, 715, 777 |
| BssNI | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| BssT1I | CCWWGG | 1 cut(s) | 571 |
| Bst2UI | CCWGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| Bst4CI | ACNGT | 6 cut(s) | 991, 1134, 1176, 1228, 1419, 1446 |
| Bst6I | CTCTTC | 3 cut(s) | 395, 560, 1322 |
| BstACI | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| BstC8I | GCNNGC | 7 cut(s) | 187, 499, 756, 950, 1330, 1506, 1510 |
| BstDEI | CTNAG | 5 cut(s) | 666, 704, 1236, 1335, 1587 |
| BstDSI | CCRYGG | 1 cut(s) | 571 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 557 |
| BstF5I | GGATG | 2 cut(s) | 1484, 1531 |
| BstFNI | CGCG | 2 cut(s) | 324, 471 |
| BstH2I | RGCGCY | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstKTI | GATC | 4 cut(s) | 345, 385, 718, 780 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstMBI | GATC | 4 cut(s) | 342, 382, 715, 777 |
| BstMCI | CGRYCG | 1 cut(s) | 385 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 321, 520, 1178 |
| BstNI | CCWGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| BstNSI | RCATGY | 2 cut(s) | 1332, 1577 |
| BstSCI | CCNGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| BstSFI | CTRYAG | 2 cut(s) | 76, 547 |
| BstUI | CGCG | 2 cut(s) | 324, 471 |
| BstV2I | GAAGAC | 2 cut(s) | 237, 445 |
| BstX2I | RGATCY | 1 cut(s) | 342 |
| BstYI | RGATCY | 1 cut(s) | 342 |
| BsuI | GTATCC | 1 cut(s) | 251 |
| BsuRI | GGCC | 1 cut(s) | 409 |
| BtgI | CCRYGG | 1 cut(s) | 571 |
| BtrI | CACGTC | 2 cut(s) | 451, 1615 |
| BtsCI | GGATG | 2 cut(s) | 1484, 1531 |
| BtsI | GCAGTG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 5 cut(s) | 85, 608, 828, 987, 1172 |
| Cac8I | GCNNGC | 7 cut(s) | 187, 499, 756, 950, 1330, 1506, 1510 |
| CaiI | CAGNNNCTG | 2 cut(s) | 84, 1147 |
| CfoI | GCGC | 1 cut(s) | 219 |
| Cfr10I | RCCGGY | 1 cut(s) | 935 |
| Cfr13I | GGNCC | 2 cut(s) | 408, 1464 |
| CseI | GACGC | 7 cut(s) | 191, 220, 428, 520, 565, 1403, 1447 |
| Csp6I | GTAC | 2 cut(s) | 355, 658 |
| CspAI | ACCGGT | 1 cut(s) | 935 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 976, 1011 |
| CviAII | CATG | 6 cut(s) | 572, 616, 889, 1329, 1516, 1574 |
| CviQI | GTAC | 2 cut(s) | 355, 658 |
| DdeI | CTNAG | 5 cut(s) | 666, 704, 1236, 1335, 1587 |
| DpnI | GATC | 4 cut(s) | 344, 384, 717, 779 |
| DpnII | GATC | 4 cut(s) | 342, 382, 715, 777 |
| DraI | TTTAAA | 1 cut(s) | 1738 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 629 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 629 |
| Eam1104I | CTCTTC | 3 cut(s) | 395, 560, 1322 |
| EarI | CTCTTC | 3 cut(s) | 395, 560, 1322 |
| EciI | GGCGGA | 1 cut(s) | 473 |
| Ecl136II | GAGCTC | 1 cut(s) | 1315 |
| Eco130I | CCWWGG | 1 cut(s) | 571 |
| Eco24I | GRGCYC | 4 cut(s) | 238, 813, 1317, 1374 |
| Eco47I | GGWCC | 1 cut(s) | 1464 |
| Eco53kI | GAGCTC | 1 cut(s) | 1315 |
| Eco57I | CTGAAG | 4 cut(s) | 231, 536, 962, 1169 |
| Eco88I | CYCGRG | 1 cut(s) | 812 |
| EcoICRI | GAGCTC | 1 cut(s) | 1315 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 557 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1464 |
| EcoRI | GAATTC | 1 cut(s) | 136 |
| EcoRII | CCWGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| EcoT14I | CCWWGG | 1 cut(s) | 571 |
| EcoT38I | GRGCYC | 4 cut(s) | 238, 813, 1317, 1374 |
| ErhI | CCWWGG | 1 cut(s) | 571 |
| FaeI | CATG | 6 cut(s) | 575, 619, 892, 1332, 1519, 1577 |
| FaqI | GGGAC | 4 cut(s) | 260, 490, 551, 626 |
| FatI | CATG | 6 cut(s) | 571, 615, 888, 1328, 1515, 1573 |
| FauI | CCCGC | 2 cut(s) | 246, 506 |
| FbaI | TGATCA | 2 cut(s) | 715, 777 |
| FblI | GTMKAC | 4 cut(s) | 417, 438, 621, 633 |
| FokI | GGATG | 2 cut(s) | 1471, 1538 |
| FriOI | GRGCYC | 4 cut(s) | 238, 813, 1317, 1374 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GsaI | CCCAGC | 1 cut(s) | 88 |
| HaeII | RGCGCY | 1 cut(s) | 220 |
| HaeIII | GGCC | 1 cut(s) | 409 |
| HapII | CCGG | 2 cut(s) | 231, 936 |
| HgaI | GACGC | 7 cut(s) | 191, 220, 428, 520, 565, 1403, 1447 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1I | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| Hin1II | CATG | 6 cut(s) | 575, 619, 892, 1332, 1519, 1577 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| HincII | GTYRAC | 4 cut(s) | 418, 439, 622, 1381 |
| HindII | GTYRAC | 4 cut(s) | 418, 439, 622, 1381 |
| HindIII | AAGCTT | 1 cut(s) | 1211 |
| HpaI | GTTAAC | 1 cut(s) | 1381 |
| HpaII | CCGG | 2 cut(s) | 231, 936 |
| HphI | GGTGA | 2 cut(s) | 1219, 1268 |
| Hpy166II | GTNNAC | 8 cut(s) | 304, 418, 439, 622, 634, 822, 1231, 1381 |
| Hpy188I | TCNGA | 7 cut(s) | 250, 257, 382, 786, 942, 1122, 1149 |
| Hpy188III | TCNNGA | 9 cut(s) | 108, 117, 126, 231, 370, 643, 791, 1070, 1462 |
| Hpy8I | GTNNAC | 8 cut(s) | 304, 418, 439, 622, 634, 822, 1231, 1381 |
| HpyAV | CCTTC | 7 cut(s) | 114, 304, 796, 800, 862, 1359, 1477 |
| HpyCH4III | ACNGT | 6 cut(s) | 991, 1134, 1176, 1228, 1419, 1446 |
| HpyCH4IV | ACGT | 4 cut(s) | 35, 435, 450, 1614 |
| HpyCH4V | TGCA | 9 cut(s) | 32, 78, 549, 589, 754, 952, 1172, 1276, 1713 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 321, 520, 1178 |
| HpyF3I | CTNAG | 5 cut(s) | 666, 704, 1236, 1335, 1587 |
| HpySE526I | ACGT | 4 cut(s) | 35, 435, 450, 1614 |
| Hsp92I | GRCGYC | 3 cut(s) | 420, 576, 1458 |
| Hsp92II | CATG | 6 cut(s) | 575, 619, 892, 1332, 1519, 1577 |
| HspAI | GCGC | 1 cut(s) | 217 |
| Kpn2I | TCCGGA | 1 cut(s) | 230 |
| Ksp22I | TGATCA | 2 cut(s) | 715, 777 |
| KspAI | GTTAAC | 1 cut(s) | 1381 |
| Kzo9I | GATC | 4 cut(s) | 342, 382, 715, 777 |
| LguI | GCTCTTC | 2 cut(s) | 395, 1322 |
| LmnI | GCTCC | 2 cut(s) | 233, 1369 |
| MaeII | ACGT | 4 cut(s) | 35, 435, 450, 1614 |
| MalI | GATC | 4 cut(s) | 344, 384, 717, 779 |
| MboI | GATC | 4 cut(s) | 342, 382, 715, 777 |
| MboII | GAAGA | 9 cut(s) | 237, 340, 382, 445, 547, 685, 1162, 1165, 1309 |
| MfeI | CAATTG | 2 cut(s) | 1182, 1409 |
| MflI | RGATCY | 1 cut(s) | 342 |
| MhlI | GDGCHC | 4 cut(s) | 238, 813, 1317, 1374 |
| MlyI | GAGTC | 5 cut(s) | 105, 114, 275, 368, 524 |
| MroI | TCCGGA | 1 cut(s) | 230 |
| MroXI | GAANNNNTTC | 3 cut(s) | 10, 1065, 1418 |
| MseI | TTAA | 7 cut(s) | 582, 744, 1077, 1380, 1704, 1737, 1748 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1520 |
| MspA1I | CMGCKG | 1 cut(s) | 592 |
| MspI | CCGG | 2 cut(s) | 231, 936 |
| MspR9I | CCNGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| MunI | CAATTG | 2 cut(s) | 1182, 1409 |
| Mva1269I | GAATGC | 1 cut(s) | 1278 |
| MvaI | CCWGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| MvnI | CGCG | 2 cut(s) | 324, 471 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 321, 520, 1178 |
| NcoI | CCATGG | 1 cut(s) | 571 |
| NdeII | GATC | 4 cut(s) | 342, 382, 715, 777 |
| NlaIII | CATG | 6 cut(s) | 575, 619, 892, 1332, 1519, 1577 |
| NlaIV | GGNNCC | 3 cut(s) | 235, 482, 1371 |
| NspI | RCATGY | 2 cut(s) | 1332, 1577 |
| PaeI | GCATGC | 1 cut(s) | 1332 |
| PaeR7I | CTCGAG | 1 cut(s) | 812 |
| PciSI | GCTCTTC | 2 cut(s) | 395, 1322 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 115, 124, 432, 627 |
| PctI | GAATGC | 1 cut(s) | 1278 |
| PdmI | GAANNNNTTC | 3 cut(s) | 10, 1065, 1418 |
| PfeI | GAWTC | 6 cut(s) | 525, 787, 1084, 1144, 1529, 1655 |
| PflFI | GACNNNGTC | 3 cut(s) | 422, 449, 617 |
| PinAI | ACCGGT | 1 cut(s) | 935 |
| Ple19I | CGATCG | 1 cut(s) | 385 |
| PleI | GAGTC | 5 cut(s) | 105, 114, 275, 367, 524 |
| PpsI | GAGTC | 5 cut(s) | 105, 114, 275, 367, 524 |
| PpuMI | RGGWCCY | 1 cut(s) | 1464 |
| PsiI | TTATAA | 1 cut(s) | 846 |
| Psp124BI | GAGCTC | 1 cut(s) | 1317 |
| Psp5II | RGGWCCY | 1 cut(s) | 1464 |
| Psp6I | CCWGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| PspFI | CCCAGC | 1 cut(s) | 84 |
| PspGI | CCWGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| PspN4I | GGNNCC | 3 cut(s) | 235, 482, 1371 |
| PspPI | GGNCC | 2 cut(s) | 408, 1464 |
| PspPPI | RGGWCCY | 1 cut(s) | 1464 |
| PspXI | VCTCGAGB | 1 cut(s) | 812 |
| PstI | CTGCAG | 2 cut(s) | 80, 551 |
| PstNI | CAGNNNCTG | 2 cut(s) | 84, 1147 |
| PsuI | RGATCY | 1 cut(s) | 342 |
| PsyI | GACNNNGTC | 3 cut(s) | 422, 449, 617 |
| PvuI | CGATCG | 1 cut(s) | 385 |
| PvuII | CAGCTG | 1 cut(s) | 592 |
| RsaI | GTAC | 2 cut(s) | 356, 659 |
| RsaNI | GTAC | 2 cut(s) | 355, 658 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1520 |
| SacI | GAGCTC | 1 cut(s) | 1317 |
| SalI | GTCGAC | 3 cut(s) | 416, 437, 620 |
| SapI | GCTCTTC | 2 cut(s) | 395, 1322 |
| SaqAI | TTAA | 7 cut(s) | 582, 744, 1077, 1380, 1704, 1737, 1748 |
| Sau3AI | GATC | 4 cut(s) | 342, 382, 715, 777 |
| Sau96I | GGNCC | 2 cut(s) | 408, 1464 |
| SchI | GAGTC | 5 cut(s) | 105, 114, 275, 368, 524 |
| ScrFI | CCNGG | 5 cut(s) | 406, 535, 560, 1205, 1391 |
| SduI | GDGCHC | 4 cut(s) | 238, 813, 1317, 1374 |
| SfcI | CTRYAG | 2 cut(s) | 76, 547 |
| Sfr274I | CTCGAG | 1 cut(s) | 812 |
| SgrDI | CGTCGACG | 1 cut(s) | 416 |
| SinI | GGWCC | 1 cut(s) | 1464 |
| SlaI | CTCGAG | 1 cut(s) | 812 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1520 |
| SmlI | CTYRAG | 2 cut(s) | 791, 812 |
| SmoI | CTYRAG | 2 cut(s) | 791, 812 |
| SphI | GCATGC | 1 cut(s) | 1332 |
| SsiI | CCGC | 8 cut(s) | 239, 313, 322, 469, 484, 499, 825, 1048 |
| SstI | GAGCTC | 1 cut(s) | 1317 |
| StyD4I | CCNGG | 5 cut(s) | 404, 533, 558, 1203, 1389 |
| StyI | CCWWGG | 1 cut(s) | 571 |
| TaaI | ACNGT | 6 cut(s) | 991, 1134, 1176, 1228, 1419, 1446 |
| TaiI | ACGT | 4 cut(s) | 38, 438, 453, 1617 |
| TatI | WGTACW | 1 cut(s) | 657 |
| TfiI | GAWTC | 6 cut(s) | 525, 787, 1084, 1144, 1529, 1655 |
| Tru1I | TTAA | 7 cut(s) | 582, 744, 1077, 1380, 1704, 1737, 1748 |
| Tru9I | TTAA | 7 cut(s) | 582, 744, 1077, 1380, 1704, 1737, 1748 |
| TscAI | CASTG | 5 cut(s) | 85, 608, 835, 994, 1179 |
| TspDTI | ATGAA | 8 cut(s) | 686, 899, 1280, 1305, 1330, 1443, 1473, 1542 |
| TspGWI | ACGGA | 3 cut(s) | 274, 403, 1483 |
| TspRI | CASTG | 5 cut(s) | 85, 608, 835, 994, 1179 |
| Tth111I | GACNNNGTC | 3 cut(s) | 422, 449, 617 |
| VpaK11BI | GGWCC | 1 cut(s) | 1464 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 557 |
| XapI | RAATTY | 2 cut(s) | 136, 1073 |
| XceI | RCATGY | 2 cut(s) | 1332, 1577 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1612 |
| XhoI | CTCGAG | 1 cut(s) | 812 |
| XmiI | GTMKAC | 4 cut(s) | 417, 438, 621, 633 |
| XmnI | GAANNNNTTC | 3 cut(s) | 10, 1065, 1418 |