Rorug06G0344500

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
49573935 .. 49576398
2464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0344500.1

Sequence Viewer

Length: 2274 bp
ATGGGAATGCGTATGAGGGTTCATAGAGAAACTGCATTAGTGCCGCCGCCAGTGCATGGACACCAACTCCTTCGAGTACTTGTAGAGGTGATGATCATGATGAATATCACCATCTATGAAAACACATCACAAGCCAAAGCAGATGCATCATCCCCTAAACTCCGATCTAAGGGATGCTCAGCCACTTGTGGGTCTCTTAGCATCCCTTTTCCTTTCGGCACATCCCCGGGTTGTTACTTTGACGACAACTTTTTCGTCTCCTGTAATACCACTACAAATAAAGCATTTCTCCGAGGAAGAAACAATGATTTAGCTATCCTCCACATATCACTGGAGGATCACGAACTGCGTGTGTCCAGCCCCGTGACGAAAGCCTGCTTTGATGAGCAGGGGAGTCCTCTCAAAAGGTGGATTACAGGGGAAGATGGAAGGGTAGAAACTCCCATGGTGACACCCTCCGACTACTTTTACATCTCAAGTACACGAAACAAGTTCACTACTATTGGTTGCAATACAAGCGCGATAATCGTGACCAGCACCCCTAGAGATTTGGGCAACAACAATGCAGATTTGGGATCGACGTACCTGGACTCTTGTGCATCTTTGTGTCTTCCAGGAGTCAAGAAGGTGAAGAATGGAACTTGCGACCACCTTAGTGGATGTTGCCAGAAATCTATCACAATCAAAGGCCTGACAAATTATGCGATTTCATATGGGAGTAGGAAGGAAGTAATTCGAAACAGAAATAGGTCAATATTAGCAATGGTACCACCTACATGTGCTTATGCTTTTGTTGTAGAAGCAGATACCTTTGAGTTTTCCTCTTTAGATCTTCAACAAGGCATACACAACCGTGACGCTGTCCCTATGGTGCTCAATTGGGTTGTTGGGAATTACAATACATGTCAAGAGGCTCAGTCATCGTCGTCTACTCCCAGTAGTAACATAACTTATGCATGTCGCGCAAAGAATAGCGAATGTCACAACTCAACCAGCGGACCTGGCTATCTCTGCAAATGCCGCGAAGGTTACCAAGGGAACCCTTACATCCTTGATGGTTGTCAAGACATTGACGAGTGTGAGCGTGAGCGCGAGCTCATAAACCCGTGTCAGCTCAGCAAAATGCATCAACAATCCTCTAAGTGTTTATTGCATTTGTCCAGATGGATGCAAAGGAAATGGCAAGAAAAGCGGAACTGGTTGCAGCATCAATATCTACAACTTATTCTTGCATTTGGTATTTGCATAAGCATCTTGGTGCTCCTTGGAGTAGGTTTTCGGATTTGCTGGGCATCAAAGAAAAGAAAACTCGTCCAACTCAAAATGAAGTTCCTTAAACAAAATGGTGGAATTTTGTCGCAACAACTGCTCTCTGGTGAGAGAGCCCTTGAGATGATAAAAAATTTTAGTGCAGAGGAGCTCAAAAAGGCGACAAATAGTTACAACGAGGGTGTGGTTCTTGGCAAAGGAGGCAACGGAAGAGTTTACAAGGGACTTTTACGAGGTAAGAAAGTGGTTGCCATTAAGAAGTCTAAGGTTTGTGACAGGAGCCAAATCGAGCAGTTCATTAACGAGTTGATTATTCTTTTCCAAGTCAATCACCCCAATGTTGTCAAGTTATTGGGTTGCTGCTTGGAGACTGAAGTCCCCATACTTGTTTACGAGTTCATCACGAAAGGTACTCTTTCAAGCCATCTTCACTCGTCCTCAATTAGACTGTCATGGCAAATCCGCCTTAAAATTGCGAAGGAAGTTGCAGCAGCACTTGCATACTTGCACTCCGAGACTTCTATCCCTATCATACATAGAGATGTAAAGTCAGCCAATGTACTACTGGATGACAACTTCACGGCAAAGATTTCCGACTTTGGAGCTTCGAAGCTAACTCCTATCGGTCAAACTCAAATAACCACACTGGTGCAGGGCACGTACGGTTACTTAGATCCAGAATACTTCTGTAGTGGCATACTAACAGAAAAGAGTGATGTCTATGGTTATGGAGTCGTGCTGGCAGAGCTACTCACAGCCAAGGAGGCACTGTTTTGGAATAGTTCAGGGAGTAGAATAAACCTAGCATTCTACTTTGTTTCTTCAGTGAAAGAGGATCGCTTGGTCGAAATTCTTGATGATCAAGTAGGTGTCGACCAAGAAATCATTGAGTTACTAACGGAAGTTGCTAGCCTTGCAGTAACGTGTTTAAGGGAGCGAGGAGATGAAAGACCTACTATGAAGGAAGTCCAAACAGAGCTAGAAGGACTAAGCCCACTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

757

Amino Acids

84.25

Weight (kDa)

8.45

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 59 - 119 5.3e-10 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 481 - 747 1.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 486 - 750 5.7e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 766
AccB1I GGYRCC 1 cut(s) 766
AccB7I CCANNNNNTGG 1 cut(s) 56
AccI GTMKAC 2 cut(s) 929, 2142
AccII CGCG 4 cut(s) 521, 963, 1023, 1092
AciI CCGC 6 cut(s) 44, 47, 996, 1021, 1192, 1732
AclWI GGATC 4 cut(s) 345, 583, 1937, 2112
AcsI RAATTY 3 cut(s) 1350, 1402, 2118
AcuI CTGAAG 2 cut(s) 1662, 2076
AfaI GTAC 7 cut(s) 78, 481, 584, 768, 1681, 1830, 1931
AfiI CCNNNNNNNGG 3 cut(s) 56, 169, 189
AflIII ACRYGT 3 cut(s) 776, 902, 2192
AgsI TTSAA 2 cut(s) 836, 1689
AjnI CCWGG 3 cut(s) 585, 613, 1000
AleI CACNNNNGTG 3 cut(s) 654, 852, 1916
AluBI AGCT 8 cut(s) 314, 1096, 1114, 1420, 1874, 1882, 2017, 2248
AluI AGCT 8 cut(s) 314, 1096, 1114, 1420, 1874, 1882, 2017, 2248
Alw21I GWGCWC 4 cut(s) 876, 1098, 1263, 1422
Alw26I GTCTC 4 cut(s) 198, 262, 1631, 1778
AlwI GGATC 4 cut(s) 345, 583, 1937, 2112
Ama87I CYCGRG 1 cut(s) 226
AoxI GGCC 1 cut(s) 688
ApeKI GCWGC 4 cut(s) 1204, 1629, 1757, 1760
ApoI RAATTY 3 cut(s) 1350, 1402, 2118
ArsI GACNNNNNNTTYG 2 cut(s) 236, 268
Asp700I GAANNNNTTC 1 cut(s) 732
Asp718I GGTACC 1 cut(s) 766
AspLEI GCGC 3 cut(s) 521, 965, 1092
AspS9I GGNCC 1 cut(s) 998
AsuC2I CCSGG 2 cut(s) 227, 228
AsuHPI GGTGA 6 cut(s) 100, 100, 460, 640, 1388, 1592
AsuII TTCGAA 2 cut(s) 736, 1877
AsuNHI GCTAGC 1 cut(s) 2177
AvaI CYCGRG 1 cut(s) 226
AvaII GGWCC 1 cut(s) 998
BaeGI GKGCMC 1 cut(s) 1928
BanI GGYRCC 1 cut(s) 766
BanII GRGCYC 3 cut(s) 1098, 1387, 1422
BarI GAAGNNNNNNTAC 2 cut(s) 1635, 1667
BbsI GAAGAC 1 cut(s) 602
Bbv12I GWGCWC 4 cut(s) 876, 1098, 1263, 1422
BbvI GCAGC 4 cut(s) 1216, 1616, 1769, 1772
BccI CCATC 5 cut(s) 119, 419, 1049, 1158, 1701
BceAI ACGGC 1 cut(s) 1866
BciT130I CCWGG 3 cut(s) 587, 615, 1002
BclI TGATCA 2 cut(s) 93, 2128
BcnI CCSGG 2 cut(s) 227, 228
BcoDI GTCTC 4 cut(s) 198, 262, 1631, 1778
BfaI CTAG 4 cut(s) 543, 2072, 2178, 2249
BfmI CTRYAG 1 cut(s) 1957
BglI GCCNNNNNGGC 1 cut(s) 2033
BglII AGATCT 1 cut(s) 829
BisI GCNGC 7 cut(s) 44, 47, 1021, 1205, 1630, 1758, 1761
BlpI GCTNAGC 2 cut(s) 178, 1115
BlsI GCNGC 7 cut(s) 45, 48, 1022, 1206, 1631, 1759, 1762
BmcAI AGTACT 1 cut(s) 78
Bme1390I CCNGG 5 cut(s) 227, 228, 587, 615, 1002
Bme18I GGWCC 1 cut(s) 998
BmeT110I CYCGRG 1 cut(s) 226
BmgT120I GGNCC 1 cut(s) 998
BmiI GGNNCC 3 cut(s) 768, 1040, 1550
BmrFI CCNGG 5 cut(s) 227, 228, 587, 615, 1002
BmrI ACTGGG 1 cut(s) 930
BmtI GCTAGC 1 cut(s) 2181
BmuI ACTGGG 1 cut(s) 930
BoxI GACNNNNGTC 1 cut(s) 1643
BpiI GAAGAC 1 cut(s) 602
BplI GAGNNNNNCTC 2 cut(s) 806, 838
BpmI CTGGAG 1 cut(s) 353
Bpu1102I GCTNAGC 2 cut(s) 178, 1115
Bpu14I TTCGAA 2 cut(s) 736, 1877
BpuEI CTTGAG 2 cut(s) 460, 1409
BpuMI CCSGG 2 cut(s) 227, 228
BsaAI YACGTR 1 cut(s) 1929
BsaBI GATNNNNATC 1 cut(s) 104
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 7 cut(s) 225, 226, 292, 444, 1033, 1264, 2028
BsaXI ACNNNNNCTCC 6 cut(s) 51, 81, 1763, 1793, 2024, 2054
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 169, 189
Bse1I ACTGG 6 cut(s) 50, 336, 936, 1202, 1839, 1920
Bse3DI GCAATG 1 cut(s) 768
Bse8I GATNNNNATC 1 cut(s) 104
BseBI CCWGG 3 cut(s) 587, 615, 1002
BseDI CCNNGG 7 cut(s) 225, 226, 292, 444, 1033, 1264, 2028
BseGI GGATG 8 cut(s) 149, 179, 201, 221, 665, 1047, 1173, 1843
BseJI GATNNNNATC 1 cut(s) 104
BseLI CCNNNNNNNGG 3 cut(s) 56, 169, 189
BseMI GCAATG 1 cut(s) 768
BseMII CTCAG 3 cut(s) 192, 929, 1129
BseNI ACTGG 6 cut(s) 50, 336, 936, 1202, 1839, 1920
BseRI GAGGAG 2 cut(s) 1430, 2223
BseSI GKGCMC 1 cut(s) 1928
BseXI GCAGC 4 cut(s) 1216, 1616, 1769, 1772
BseYI CCCAGC 1 cut(s) 1287
BsgI GTGCAG 2 cut(s) 1431, 1940
Bsh1236I CGCG 4 cut(s) 521, 963, 1023, 1092
BshFI GGCC 1 cut(s) 690
BshNI GGYRCC 1 cut(s) 766
BsiHKAI GWGCWC 4 cut(s) 876, 1098, 1263, 1422
BsiHKCI CYCGRG 1 cut(s) 226
BsiSI CCGG 1 cut(s) 227
BsiWI CGTACG 1 cut(s) 1929
BslFI GGGAC 3 cut(s) 848, 1506, 1631
BslI CCNNNNNNNGG 3 cut(s) 56, 169, 189
BsmAI GTCTC 4 cut(s) 198, 262, 1631, 1778
BsmBI CGTCTC 1 cut(s) 262
BsmFI GGGAC 3 cut(s) 848, 1506, 1631
BsmI GAATGC 2 cut(s) 12, 2075
BsnI GGCC 1 cut(s) 690
Bso31I GGTCTC 1 cut(s) 198
BsoBI CYCGRG 1 cut(s) 226
Bsp119I TTCGAA 2 cut(s) 736, 1877
Bsp1286I GDGCHC 6 cut(s) 876, 1098, 1263, 1387, 1422, 1928
Bsp143I GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
Bsp1720I GCTNAGC 2 cut(s) 178, 1115
Bsp19I CCATGG 1 cut(s) 444
BspACI CCGC 6 cut(s) 44, 47, 996, 1021, 1192, 1732
BspANI GGCC 1 cut(s) 690
BspCNI CTCAG 3 cut(s) 191, 928, 1128
BspFNI CGCG 4 cut(s) 521, 963, 1023, 1092
BspHI TCATGA 1 cut(s) 96
BspLI GGNNCC 3 cut(s) 768, 1040, 1550
BspOI GCTAGC 1 cut(s) 2181
BspPI GGATC 4 cut(s) 345, 583, 1937, 2112
BspT104I TTCGAA 2 cut(s) 736, 1877
BspT107I GGYRCC 1 cut(s) 766
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 768
BsrI ACTGG 6 cut(s) 50, 336, 936, 1202, 1839, 1920
BssECI CCNNGG 7 cut(s) 225, 226, 292, 444, 1033, 1264, 2028
BssMI GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
BssT1I CCWWGG 4 cut(s) 444, 1033, 1264, 2028
Bst2UI CCWGG 3 cut(s) 587, 615, 1002
Bst4CI ACNGT 4 cut(s) 854, 1719, 1934, 2040
Bst6I CTCTTC 1 cut(s) 1474
BstAPI GCANNNNNTGC 2 cut(s) 1366, 1766
BstBAI YACGTR 1 cut(s) 1929
BstBI TTCGAA 2 cut(s) 736, 1877
BstC8I GCNNGC 4 cut(s) 376, 1094, 2010, 2179
BstDSI CCRYGG 1 cut(s) 444
BstEII GGTNACC 1 cut(s) 1028
BstF5I GGATG 8 cut(s) 149, 179, 201, 221, 665, 1047, 1173, 1843
BstFNI CGCG 4 cut(s) 521, 963, 1023, 1092
BstHHI GCGC 3 cut(s) 521, 965, 1092
BstKTI GATC 8 cut(s) 96, 167, 340, 578, 832, 1945, 2107, 2131
BstMAI GTCTC 4 cut(s) 198, 262, 1631, 1778
BstMBI GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
BstNI CCWGG 3 cut(s) 587, 615, 1002
BstNSI RCATGY 3 cut(s) 780, 906, 960
BstPAI GACNNNNGTC 1 cut(s) 1643
BstPI GGTNACC 1 cut(s) 1028
BstSCI CCNGG 5 cut(s) 225, 226, 585, 613, 1000
BstSFI CTRYAG 1 cut(s) 1957
BstSLI GKGCMC 1 cut(s) 1928
BstUI CGCG 4 cut(s) 521, 963, 1023, 1092
BstV1I GCAGC 4 cut(s) 1216, 1616, 1769, 1772
BstV2I GAAGAC 1 cut(s) 602
BstX2I RGATCY 2 cut(s) 829, 1942
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 2 cut(s) 829, 1942
BsuRI GGCC 1 cut(s) 690
BtgI CCRYGG 1 cut(s) 444
BtsCI GGATG 8 cut(s) 149, 179, 201, 221, 665, 1047, 1173, 1843
BtsIMutI CAGTG 5 cut(s) 57, 329, 1913, 2036, 2100
Cac8I GCNNGC 4 cut(s) 376, 1094, 2010, 2179
CciI TCATGA 1 cut(s) 96
CfoI GCGC 3 cut(s) 521, 965, 1092
Cfr13I GGNCC 1 cut(s) 998
Cfr9I CCCGGG 1 cut(s) 226
CseI GACGC 1 cut(s) 866
Csp6I GTAC 7 cut(s) 77, 480, 583, 767, 1680, 1829, 1930
CviAII CATG 7 cut(s) 56, 97, 445, 777, 903, 957, 1722
CviQI GTAC 7 cut(s) 77, 480, 583, 767, 1680, 1829, 1930
DpnI GATC 8 cut(s) 95, 166, 339, 577, 831, 1944, 2106, 2130
DpnII GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
Eam1104I CTCTTC 1 cut(s) 1474
EarI CTCTTC 1 cut(s) 1474
EciI GGCGGA 1 cut(s) 1721
Ecl136II GAGCTC 2 cut(s) 1096, 1420
Eco130I CCWWGG 4 cut(s) 444, 1033, 1264, 2028
Eco147I AGGCCT 1 cut(s) 690
Eco24I GRGCYC 3 cut(s) 1098, 1387, 1422
Eco31I GGTCTC 1 cut(s) 198
Eco47I GGWCC 1 cut(s) 998
Eco53kI GAGCTC 2 cut(s) 1096, 1420
Eco57I CTGAAG 2 cut(s) 1662, 2076
Eco88I CYCGRG 1 cut(s) 226
Eco91I GGTNACC 1 cut(s) 1028
EcoICRI GAGCTC 2 cut(s) 1096, 1420
EcoO65I GGTNACC 1 cut(s) 1028
EcoRII CCWGG 3 cut(s) 585, 613, 1000
EcoT14I CCWWGG 4 cut(s) 444, 1033, 1264, 2028
EcoT22I ATGCAT 3 cut(s) 148, 958, 1128
EcoT38I GRGCYC 3 cut(s) 1098, 1387, 1422
ErhI CCWWGG 4 cut(s) 444, 1033, 1264, 2028
Esp3I CGTCTC 1 cut(s) 262
FaeI CATG 7 cut(s) 59, 100, 448, 780, 906, 960, 1725
FalI AAGNNNNNCTT 2 cut(s) 1668, 1700
FaqI GGGAC 3 cut(s) 848, 1506, 1631
FatI CATG 7 cut(s) 55, 96, 444, 776, 902, 956, 1721
FauNDI CATATG 1 cut(s) 712
FbaI TGATCA 2 cut(s) 93, 2128
FblI GTMKAC 2 cut(s) 929, 2142
Fnu4HI GCNGC 7 cut(s) 44, 47, 1021, 1205, 1630, 1758, 1761
FokI GGATG 8 cut(s) 136, 186, 188, 208, 672, 1034, 1180, 1850
FriOI GRGCYC 3 cut(s) 1098, 1387, 1422
Fsp4HI GCNGC 7 cut(s) 44, 47, 1021, 1205, 1630, 1758, 1761
FspBI CTAG 4 cut(s) 543, 2072, 2178, 2249
GlaI GCGC 3 cut(s) 520, 964, 1091
GluI GCNGC 7 cut(s) 44, 47, 1021, 1205, 1630, 1758, 1761
GsaI CCCAGC 1 cut(s) 1291
GsuI CTGGAG 1 cut(s) 353
HaeIII GGCC 1 cut(s) 690
HapII CCGG 1 cut(s) 227
HgaI GACGC 1 cut(s) 866
HhaI GCGC 3 cut(s) 521, 965, 1092
Hin1II CATG 7 cut(s) 59, 100, 448, 780, 906, 960, 1725
Hin6I GCGC 3 cut(s) 519, 963, 1090
HinP1I GCGC 3 cut(s) 519, 963, 1090
HincII GTYRAC 1 cut(s) 2143
HindII GTYRAC 1 cut(s) 2143
HinfI GANTC 4 cut(s) 394, 590, 618, 2001
HpaII CCGG 1 cut(s) 227
HphI GGTGA 6 cut(s) 100, 100, 460, 640, 1388, 1592
Hpy166II GTNNAC 6 cut(s) 482, 495, 930, 1486, 1660, 2143
Hpy188I TCNGA 6 cut(s) 164, 293, 460, 1281, 1783, 1864
Hpy8I GTNNAC 6 cut(s) 482, 495, 930, 1486, 1660, 2143
Hpy99I CGWCG 2 cut(s) 583, 928
HpyAV CCTTC 8 cut(s) 80, 423, 619, 718, 1019, 1741, 2224, 2246
HpyCH4III ACNGT 4 cut(s) 854, 1719, 1934, 2040
HpyCH4IV ACGT 3 cut(s) 581, 1928, 2192
HpySE526I ACGT 3 cut(s) 581, 1928, 2192
Hsp92II CATG 7 cut(s) 59, 100, 448, 780, 906, 960, 1725
HspAI GCGC 3 cut(s) 519, 963, 1090
KpnI GGTACC 1 cut(s) 770
Ksp22I TGATCA 2 cut(s) 93, 2128
Kzo9I GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
LmnI GCTCC 5 cut(s) 1266, 1417, 1548, 1871, 2203
Lsp1109I GCAGC 4 cut(s) 1216, 1616, 1769, 1772
MaeI CTAG 4 cut(s) 543, 2072, 2178, 2249
MaeII ACGT 3 cut(s) 581, 1928, 2192
MalI GATC 8 cut(s) 95, 166, 339, 577, 831, 1944, 2106, 2130
MboI GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
MboII GAAGA 8 cut(s) 309, 434, 602, 643, 824, 1491, 1688, 2082
MfeI CAATTG 1 cut(s) 877
MflI RGATCY 2 cut(s) 829, 1942
MhlI GDGCHC 6 cut(s) 876, 1098, 1263, 1387, 1422, 1928
MlyI GAGTC 4 cut(s) 403, 584, 627, 2010
MmeI TCCRAC 3 cut(s) 483, 1339, 1887
Mph1103I ATGCAT 3 cut(s) 148, 958, 1128
MroXI GAANNNNTTC 1 cut(s) 732
MseI TTAA 7 cut(s) 1335, 1524, 1569, 1737, 2198, 2268, 2272
MslI CAYNNNNRTG 8 cut(s) 604, 654, 775, 852, 1256, 1605, 1809, 1916
MspA1I CMGCKG 1 cut(s) 996
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 5 cut(s) 227, 228, 587, 615, 1002
MunI CAATTG 1 cut(s) 877
Mva1269I GAATGC 2 cut(s) 12, 2075
MvaI CCWGG 3 cut(s) 587, 615, 1002
MvnI CGCG 4 cut(s) 521, 963, 1023, 1092
NciI CCSGG 2 cut(s) 227, 228
NcoI CCATGG 1 cut(s) 444
NdeI CATATG 1 cut(s) 712
NdeII GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
NheI GCTAGC 1 cut(s) 2177
NlaIII CATG 7 cut(s) 59, 100, 448, 780, 906, 960, 1725
NlaIV GGNNCC 3 cut(s) 768, 1040, 1550
NmuCI GTSAC 6 cut(s) 364, 448, 529, 854, 980, 1541
NsiI ATGCAT 3 cut(s) 148, 958, 1128
NspI RCATGY 3 cut(s) 780, 906, 960
NspV TTCGAA 2 cut(s) 736, 1877
OliI CACNNNNGTG 3 cut(s) 654, 852, 1916
PacI TTAATTAA 1 cut(s) 2272
PagI TCATGA 1 cut(s) 96
PceI AGGCCT 1 cut(s) 690
PciI ACATGT 2 cut(s) 776, 902
PctI GAATGC 2 cut(s) 12, 2075
PdmI GAANNNNTTC 1 cut(s) 732
Pfl23II CGTACG 1 cut(s) 1929
PflFI GACNNNGTC 1 cut(s) 860
PflMI CCANNNNNTGG 1 cut(s) 56
PfoI TCCNGGA 1 cut(s) 613
PkrI GCNGC 7 cut(s) 45, 48, 1022, 1206, 1631, 1759, 1762
PleI GAGTC 4 cut(s) 402, 584, 626, 2009
PpsI GAGTC 4 cut(s) 402, 584, 626, 2009
Ppu21I YACGTR 1 cut(s) 1929
PscI ACATGT 2 cut(s) 776, 902
PshAI GACNNNNGTC 1 cut(s) 1643
Psp124BI GAGCTC 2 cut(s) 1098, 1422
Psp6I CCWGG 3 cut(s) 585, 613, 1000
PspEI GGTNACC 1 cut(s) 1028
PspFI CCCAGC 1 cut(s) 1287
PspGI CCWGG 3 cut(s) 585, 613, 1000
PspLI CGTACG 1 cut(s) 1929
PspN4I GGNNCC 3 cut(s) 768, 1040, 1550
PspPI GGNCC 1 cut(s) 998
PsuI RGATCY 2 cut(s) 829, 1942
PsyI GACNNNGTC 1 cut(s) 860
RsaI GTAC 7 cut(s) 78, 481, 584, 768, 1681, 1830, 1931
RsaNI GTAC 7 cut(s) 77, 480, 583, 767, 1680, 1829, 1930
RseI CAYNNNNRTG 8 cut(s) 604, 654, 775, 852, 1256, 1605, 1809, 1916
SacI GAGCTC 2 cut(s) 1098, 1422
SalI GTCGAC 1 cut(s) 2141
SaqAI TTAA 7 cut(s) 1335, 1524, 1569, 1737, 2198, 2268, 2272
SatI GCNGC 7 cut(s) 44, 47, 1021, 1205, 1630, 1758, 1761
Sau3AI GATC 8 cut(s) 93, 164, 337, 575, 829, 1942, 2104, 2128
Sau96I GGNCC 1 cut(s) 998
ScaI AGTACT 1 cut(s) 78
SchI GAGTC 4 cut(s) 403, 584, 627, 2010
ScrFI CCNGG 5 cut(s) 227, 228, 587, 615, 1002
SduI GDGCHC 6 cut(s) 876, 1098, 1263, 1387, 1422, 1928
SfcI CTRYAG 1 cut(s) 1957
SfuI TTCGAA 2 cut(s) 736, 1877
SinI GGWCC 1 cut(s) 998
SmaI CCCGGG 1 cut(s) 228
SmiMI CAYNNNNRTG 8 cut(s) 604, 654, 775, 852, 1256, 1605, 1809, 1916
SmlI CTYRAG 2 cut(s) 475, 1388
SmoI CTYRAG 2 cut(s) 475, 1388
SseBI AGGCCT 1 cut(s) 690
SsiI CCGC 6 cut(s) 44, 47, 996, 1021, 1192, 1732
SspI AATATT 1 cut(s) 756
SspMI CTAG 4 cut(s) 543, 2072, 2178, 2249
SstI GAGCTC 2 cut(s) 1098, 1422
StuI AGGCCT 1 cut(s) 690
StyD4I CCNGG 5 cut(s) 225, 226, 585, 613, 1000
StyI CCWWGG 4 cut(s) 444, 1033, 1264, 2028
TaaI ACNGT 4 cut(s) 854, 1719, 1934, 2040
TaiI ACGT 3 cut(s) 584, 1931, 2195
TaqI TCGA 7 cut(s) 73, 578, 736, 1557, 1877, 2115, 2142
TaqII GACCGA 1 cut(s) 1883
TatI WGTACW 3 cut(s) 76, 479, 1828
TauI GCSGC 3 cut(s) 46, 49, 1023
Tru1I TTAA 7 cut(s) 1335, 1524, 1569, 1737, 2198, 2268, 2272
Tru9I TTAA 7 cut(s) 1335, 1524, 1569, 1737, 2198, 2268, 2272
TscAI CASTG 5 cut(s) 57, 336, 1920, 2043, 2100
TseFI GTSAC 6 cut(s) 364, 448, 529, 854, 980, 1541
TseI GCWGC 4 cut(s) 1204, 1629, 1757, 1760
Tsp45I GTSAC 6 cut(s) 364, 448, 529, 854, 980, 1541
TspDTI ATGAA 9 cut(s) 11, 116, 132, 699, 1340, 1555, 1657, 2229, 2243
TspGWI ACGGA 2 cut(s) 1491, 2183
TspMI CCCGGG 1 cut(s) 226
TspRI CASTG 5 cut(s) 57, 336, 1920, 2043, 2100
Tth111I GACNNNGTC 1 cut(s) 860
Van91I CCANNNNNTGG 1 cut(s) 56
VpaK11BI GGWCC 1 cut(s) 998
XapI RAATTY 3 cut(s) 1350, 1402, 2118
XceI RCATGY 3 cut(s) 780, 906, 960
XcmI CCANNNNNNNNNTGG 1 cut(s) 1831
XmaI CCCGGG 1 cut(s) 226
XmiI GTMKAC 2 cut(s) 929, 2142
XmnI GAANNNNTTC 1 cut(s) 732
XspI CTAG 4 cut(s) 543, 2072, 2178, 2249
ZrmI AGTACT 1 cut(s) 78
Zsp2I ATGCAT 3 cut(s) 148, 958, 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.