Rroxscaffold_7G00162260

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0009536
Physical Location & Seq
Forward (+)
4858535 .. 4861975
3441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00162260.1

Sequence Viewer

Length: 1572 bp
ATGGCGGCTTACGACTACGACGAGCCCTCGGCGACTCACCGCCCAGCCTCCTCCGACGCGCCGCCGCAGGAGCCCGGGTACGACCCGAACCACGTCCCTGACTCCGTCAAATCCTTCGTCGTCCATCTCTACCGCCACATCCGCGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGACTTCCTTCCAGGGCATATCGGAGCGCCTCTTCAAGGACACGCCGTGGCCCTCCGTGGACGCCGTCGCGCACCACGTCGACAACGACCACGTGTTCTGCCTCCTCTACCGTGAGATGTGGTTCCGCCACCTGTACGCCAGGCTCCAGCCGACGCTGAAGCAGAGAATCGACTCCTGGGATAATTACTGTAGCCTTTTTCAGGTGGTTCTGCACGGCGTGGTCAATATGCAGCTGCCGAATCAGTGGCTGTGGGACATGGTCGATGAGTTTGTGTACCAGTTTCAGAGCTTCTGTCAGTATCGGGCTAAGATGAAGAACAAGACTGAGCAGGAGATTGCTCTTCTCAGGCAGTTTGATCAAGCTTGGAATGTGTACGGTGTGCTTAACTTTTTGCAAGCTCTGGTGGAGAAGTCTGCGATTATTCAGATTCTCGAGCATGAGAAGGAAGGGCTGGAGCAATTTACTGCCACGGATGGGTATGATTATAGTGGCGGCAGTAATGTCTTGAAGGTGTTGGGGTATTTCAGTATGGTGGGGTTGCTGCGAGTGCATTGTCTTTTGGGTGATTATCATACTGGTCTGAAATGCTTGCAACCCATTGACATTACTCAGCAAGGTGTTTACACCAGTGTGATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGCGGAGGTATGTGGAGGCAATTCGTGAATTCAATAAGATTCTACTGTACATCTATAAGACCAAGCAATATCATCAGAAATCTCCTCAGTATGAGCAGATACTAAAGAAGAATGAGCAGATGTATGCATTGTTGGCAATTAGCCTTTCACTATGTCCCCAGGTTAAGCTTGTTGAAGAAACAGTGAATTCTCAGTTGCGTGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAAGCATTTGCTATCTATGATGAGCTCTTCTCCTATGCATGTCCTAAGTTCATTACTCCATCTGCTCCAAGTTTTGAGGAGCCTCTTGTTAATTACAACCAGGATGCATATAGACTTCAGTTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAGTTATTGTCAGGTGTTAGGACCTTTTTAAAAGTCTATTCATCCATCTCTCTTGGGAACCTTGCGAAGTACATGGAAGTGGATGAATCCAAGTTGAGGACTATCTTGCTGACATACAAACACAAGACACATGCAGTTGACACTGATGGAAAAACCATTTCCAATGCTGATGTGGATTTTTATATGAATGATGATTGGGTTTATGTTGTTGACTCGAAACCACCAAAACGATATGGGGATTACTTCTTGCGTCAGATAGTGAAGCTTGAAGGGGCAATCAACGATCTGGACAGGATAAAGCTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Paf67

Protein Analysis

523

Amino Acids

61.37

Weight (kDa)

6.07

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Paf67 PF10255 114 - 509 2.9e-149 RNA polymerase I-associated factor PAF67
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 258
AccII CGCG 3 cut(s) 59, 144, 248
AciI CCGC 9 cut(s) 5, 40, 62, 65, 133, 142, 304, 672, 868
AclWI GGATC 1 cut(s) 157
AcsI RAATTY 2 cut(s) 893, 1051
AcuI CTGAAG 2 cut(s) 356, 1211
AcvI CACGTG 1 cut(s) 271
AcyI GRCGYC 1 cut(s) 240
AdeI CACNNNGTG 2 cut(s) 225, 397
AfaI GTAC 8 cut(s) 80, 158, 176, 314, 455, 554, 914, 1334
AfiI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1359
AflIII ACRYGT 2 cut(s) 153, 270
AgsI TTSAA 6 cut(s) 214, 688, 898, 1040, 1234, 1532
AjiI CACGTC 2 cut(s) 94, 256
AjnI CCWGG 5 cut(s) 189, 317, 353, 1023, 1209
AleI CACNNNNGTG 1 cut(s) 809
AluBI AGCT 8 cut(s) 412, 468, 542, 578, 1033, 1135, 1528, 1564
AluI AGCT 8 cut(s) 412, 468, 542, 578, 1033, 1135, 1528, 1564
Alw21I GWGCWC 1 cut(s) 1137
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 1 cut(s) 157
AlwNI CAGNNNCTG 1 cut(s) 427
Ama87I CYCGRG 2 cut(s) 74, 611
AoxI GGCC 1 cut(s) 227
ApeKI GCWGC 4 cut(s) 409, 412, 721, 1258
ApoI RAATTY 2 cut(s) 893, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 102, 134
Asp700I GAANNNNTTC 1 cut(s) 1238
AspLEI GCGC 3 cut(s) 61, 207, 250
AspS9I GGNCC 2 cut(s) 228, 1284
AsuC2I CCSGG 2 cut(s) 75, 76
AsuHPI GGTGA 3 cut(s) 29, 755, 1088
AvaI CYCGRG 2 cut(s) 74, 611
AvaII GGWCC 1 cut(s) 1284
BanII GRGCYC 3 cut(s) 27, 75, 1137
BarI GAAGNNNNNNTAC 4 cut(s) 140, 172, 811, 843
BbrPI CACGTG 1 cut(s) 271
Bbv12I GWGCWC 1 cut(s) 1137
BbvI GCAGC 4 cut(s) 399, 421, 708, 1270
BccI CCATC 5 cut(s) 132, 647, 1177, 1316, 1403
BceAI ACGGC 3 cut(s) 208, 227, 409
BciT130I CCWGG 5 cut(s) 191, 319, 355, 1025, 1211
BclI TGATCA 1 cut(s) 535
BcnI CCSGG 2 cut(s) 75, 76
BcoDI GTCTC 1 cut(s) 173
BfmI CTRYAG 1 cut(s) 367
BfoI RGCGCY 1 cut(s) 208
BisI GCNGC 8 cut(s) 6, 62, 65, 410, 413, 673, 722, 1259
BlsI GCNGC 8 cut(s) 7, 63, 66, 411, 414, 674, 723, 1260
Bme1390I CCNGG 7 cut(s) 75, 76, 191, 319, 355, 1025, 1211
Bme18I GGWCC 1 cut(s) 1284
BmeT110I CYCGRG 2 cut(s) 74, 611
BmgBI CACGTC 2 cut(s) 94, 256
BmgT120I GGNCC 2 cut(s) 228, 1284
BmiI GGNNCC 5 cut(s) 72, 302, 323, 1191, 1322
BmrFI CCNGG 7 cut(s) 75, 76, 191, 319, 355, 1025, 1211
BmsI GCATC 1 cut(s) 1204
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 2 cut(s) 308, 653
BpuMI CCSGG 2 cut(s) 75, 76
BsaAI YACGTR 1 cut(s) 271
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 8 cut(s) 27, 74, 190, 224, 234, 354, 648, 1023
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1359
Bse1I ACTGG 3 cut(s) 457, 760, 807
BseBI CCWGG 5 cut(s) 191, 319, 355, 1025, 1211
BseDI CCNNGG 8 cut(s) 27, 74, 190, 224, 234, 354, 648, 1023
BseGI GGATG 5 cut(s) 138, 658, 1219, 1304, 1351
BseLI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1359
BseMII CTCAG 5 cut(s) 495, 538, 803, 965, 1070
BseNI ACTGG 3 cut(s) 457, 760, 807
BseRI GAGGAG 4 cut(s) 40, 272, 939, 1202
BseXI GCAGC 4 cut(s) 399, 421, 708, 1270
BseYI CCCAGC 1 cut(s) 43
BsgI GTGCAG 1 cut(s) 374
Bsh1236I CGCG 3 cut(s) 59, 144, 248
BshFI GGCC 1 cut(s) 229
BsiHKAI GWGCWC 1 cut(s) 1137
BsiHKCI CYCGRG 2 cut(s) 74, 611
BsiSI CCGG 1 cut(s) 75
BslFI GGGAC 3 cut(s) 80, 446, 1005
BslI CCNNNNNNNGG 4 cut(s) 214, 379, 654, 1359
BsmAI GTCTC 1 cut(s) 173
BsmFI GGGAC 3 cut(s) 80, 446, 1005
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 1 cut(s) 229
BsoBI CYCGRG 2 cut(s) 74, 611
Bsp1286I GDGCHC 3 cut(s) 27, 75, 1137
Bsp1407I TGTACA 1 cut(s) 912
Bsp143I GATC 3 cut(s) 162, 535, 1546
BspACI CCGC 9 cut(s) 5, 40, 62, 65, 133, 142, 304, 672, 868
BspANI GGCC 1 cut(s) 229
BspCNI CTCAG 5 cut(s) 496, 537, 802, 964, 1069
BspFNI CGCG 3 cut(s) 59, 144, 248
BspLI GGNNCC 5 cut(s) 72, 302, 323, 1191, 1322
BspPI GGATC 1 cut(s) 157
BspQI GCTCTTC 2 cut(s) 525, 1142
BsrGI TGTACA 1 cut(s) 912
BsrI ACTGG 3 cut(s) 457, 760, 807
BssECI CCNNGG 8 cut(s) 27, 74, 190, 224, 234, 354, 648, 1023
BssMI GATC 3 cut(s) 162, 535, 1546
BssNI GRCGYC 1 cut(s) 240
Bst2UI CCWGG 5 cut(s) 191, 319, 355, 1025, 1211
Bst4CI ACNGT 7 cut(s) 290, 368, 557, 912, 1048, 1239, 1266
Bst6I CTCTTC 3 cut(s) 215, 525, 1142
BstACI GRCGYC 1 cut(s) 240
BstAUI TGTACA 1 cut(s) 912
BstBAI YACGTR 1 cut(s) 271
BstC8I GCNNGC 2 cut(s) 576, 770
BstDEI CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
BstDSI CCRYGG 3 cut(s) 224, 234, 648
BstENI CCTNNNNNAGG 2 cut(s) 212, 377
BstF5I GGATG 5 cut(s) 138, 658, 1219, 1304, 1351
BstFNI CGCG 3 cut(s) 59, 144, 248
BstH2I RGCGCY 1 cut(s) 208
BstHHI GCGC 3 cut(s) 61, 207, 250
BstKTI GATC 3 cut(s) 165, 538, 1549
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 3 cut(s) 162, 535, 1546
BstMWI GCNNNNNNNGC 4 cut(s) 70, 141, 727, 998
BstNI CCWGG 5 cut(s) 191, 319, 355, 1025, 1211
BstNSI RCATGY 2 cut(s) 1152, 1397
BstSCI CCNGG 7 cut(s) 73, 74, 189, 317, 353, 1023, 1209
BstSFI CTRYAG 1 cut(s) 367
BstUI CGCG 3 cut(s) 59, 144, 248
BstV1I GCAGC 4 cut(s) 399, 421, 708, 1270
BstX2I RGATCY 1 cut(s) 162
BstYI RGATCY 1 cut(s) 162
BsuRI GGCC 1 cut(s) 229
BtgI CCRYGG 3 cut(s) 224, 234, 648
BtrI CACGTC 2 cut(s) 94, 256
BtsCI GGATG 5 cut(s) 138, 658, 1219, 1304, 1351
BtsIMutI CAGTG 4 cut(s) 428, 814, 1053, 1404
Cac8I GCNNGC 2 cut(s) 576, 770
CaiI CAGNNNCTG 1 cut(s) 427
CfoI GCGC 3 cut(s) 61, 207, 250
Cfr13I GGNCC 2 cut(s) 228, 1284
Cfr9I CCCGGG 1 cut(s) 74
CseI GACGC 4 cut(s) 65, 248, 340, 1502
Csp6I GTAC 8 cut(s) 79, 157, 175, 313, 454, 553, 913, 1333
CviAII CATG 5 cut(s) 436, 617, 1149, 1336, 1394
CviQI GTAC 8 cut(s) 79, 157, 175, 313, 454, 553, 913, 1333
DdeI CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
DpnI GATC 3 cut(s) 164, 537, 1548
DpnII GATC 3 cut(s) 162, 535, 1546
DraI TTTAAA 1 cut(s) 1293
DraIII CACNNNGTG 2 cut(s) 225, 397
Eam1104I CTCTTC 3 cut(s) 215, 525, 1142
EarI CTCTTC 3 cut(s) 215, 525, 1142
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 1135
Eco24I GRGCYC 3 cut(s) 27, 75, 1137
Eco47I GGWCC 1 cut(s) 1284
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 2 cut(s) 356, 1211
Eco72I CACGTG 1 cut(s) 271
Eco88I CYCGRG 2 cut(s) 74, 611
EcoICRI GAGCTC 1 cut(s) 1135
EcoNI CCTNNNNNAGG 2 cut(s) 212, 377
EcoO109I RGGNCCY 1 cut(s) 1284
EcoRI GAATTC 2 cut(s) 893, 1051
EcoRII CCWGG 5 cut(s) 189, 317, 353, 1023, 1209
EcoT22I ATGCAT 3 cut(s) 994, 1150, 1219
EcoT38I GRGCYC 3 cut(s) 27, 75, 1137
FaeI CATG 5 cut(s) 439, 620, 1152, 1339, 1397
FaqI GGGAC 3 cut(s) 80, 446, 1005
FatI CATG 5 cut(s) 435, 616, 1148, 1335, 1393
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 8 cut(s) 6, 62, 65, 410, 413, 673, 722, 1259
FokI GGATG 5 cut(s) 125, 665, 1226, 1291, 1358
FriOI GRGCYC 3 cut(s) 27, 75, 1137
Fsp4HI GCNGC 8 cut(s) 6, 62, 65, 410, 413, 673, 722, 1259
GlaI GCGC 3 cut(s) 60, 206, 249
GluI GCNGC 8 cut(s) 6, 62, 65, 410, 413, 673, 722, 1259
GsaI CCCAGC 1 cut(s) 47
GsuI CTGGAG 2 cut(s) 308, 653
HaeII RGCGCY 1 cut(s) 208
HaeIII GGCC 1 cut(s) 229
HapII CCGG 1 cut(s) 75
HgaI GACGC 4 cut(s) 65, 248, 340, 1502
HhaI GCGC 3 cut(s) 61, 207, 250
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 5 cut(s) 439, 620, 1152, 1339, 1397
Hin6I GCGC 3 cut(s) 59, 205, 248
HinP1I GCGC 3 cut(s) 59, 205, 248
HincII GTYRAC 3 cut(s) 259, 1402, 1474
HindII GTYRAC 3 cut(s) 259, 1402, 1474
HindIII AAGCTT 3 cut(s) 540, 1031, 1526
HinfI GANTC 9 cut(s) 34, 101, 345, 350, 418, 607, 904, 1349, 1475
HpaII CCGG 1 cut(s) 75
HphI GGTGA 3 cut(s) 29, 755, 1088
Hpy166II GTNNAC 8 cut(s) 157, 238, 259, 454, 553, 802, 1402, 1474
Hpy188I TCNGA 7 cut(s) 55, 202, 465, 606, 762, 942, 1518
Hpy188III TCNNGA 4 cut(s) 611, 685, 890, 1550
Hpy8I GTNNAC 8 cut(s) 157, 238, 259, 454, 553, 802, 1402, 1474
Hpy99I CGWCG 6 cut(s) 23, 59, 122, 248, 260, 334
HpyAV CCTTC 6 cut(s) 124, 196, 616, 620, 682, 1526
HpyCH4III ACNGT 7 cut(s) 290, 368, 557, 912, 1048, 1239, 1266
HpyCH4IV ACGT 4 cut(s) 93, 153, 255, 270
HpyF10VI GCNNNNNNNGC 4 cut(s) 70, 141, 727, 998
HpyF3I CTNAG 7 cut(s) 486, 504, 524, 789, 951, 1056, 1155
HpySE526I ACGT 4 cut(s) 93, 153, 255, 270
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 5 cut(s) 439, 620, 1152, 1339, 1397
HspAI GCGC 3 cut(s) 59, 205, 248
Ksp22I TGATCA 1 cut(s) 535
Kzo9I GATC 3 cut(s) 162, 535, 1546
LguI GCTCTTC 2 cut(s) 525, 1142
LmnI GCTCC 6 cut(s) 70, 202, 327, 634, 1180, 1189
Lsp1109I GCAGC 4 cut(s) 399, 421, 708, 1270
LweI GCATC 1 cut(s) 1204
MaeII ACGT 4 cut(s) 93, 153, 255, 270
MalI GATC 3 cut(s) 164, 537, 1548
MboI GATC 3 cut(s) 162, 535, 1546
MboII GAAGA 7 cut(s) 160, 202, 505, 512, 985, 1052, 1129
MflI RGATCY 1 cut(s) 162
MhlI GDGCHC 3 cut(s) 27, 75, 1137
MluCI AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
MlyI GAGTC 4 cut(s) 28, 95, 344, 1469
MmeI TCCRAC 1 cut(s) 78
Mph1103I ATGCAT 3 cut(s) 994, 1150, 1219
MroXI GAANNNNTTC 1 cut(s) 1238
MseI TTAA 4 cut(s) 564, 1029, 1200, 1292
MslI CAYNNNNRTG 2 cut(s) 809, 1340
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 1 cut(s) 75
MspR9I CCNGG 7 cut(s) 75, 76, 191, 319, 355, 1025, 1211
Mva1269I GAATGC 1 cut(s) 1098
MvaI CCWGG 5 cut(s) 191, 319, 355, 1025, 1211
MvnI CGCG 3 cut(s) 59, 144, 248
MwoI GCNNNNNNNGC 4 cut(s) 70, 141, 727, 998
NciI CCSGG 2 cut(s) 75, 76
NdeII GATC 3 cut(s) 162, 535, 1546
NlaIII CATG 5 cut(s) 439, 620, 1152, 1339, 1397
NlaIV GGNNCC 5 cut(s) 72, 302, 323, 1191, 1322
NmeAIII GCCGAG 1 cut(s) 8
NsiI ATGCAT 3 cut(s) 994, 1150, 1219
NspI RCATGY 2 cut(s) 1152, 1397
OliI CACNNNNGTG 1 cut(s) 809
PaeR7I CTCGAG 1 cut(s) 611
PciSI GCTCTTC 2 cut(s) 525, 1142
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 252, 261
PctI GAATGC 1 cut(s) 1098
PdmI GAANNNNTTC 1 cut(s) 1238
PfeI GAWTC 5 cut(s) 345, 418, 607, 904, 1349
PflFI GACNNNGTC 3 cut(s) 104, 242, 437
PkrI GCNGC 8 cut(s) 7, 63, 66, 411, 414, 674, 723, 1260
PleI GAGTC 4 cut(s) 28, 95, 344, 1469
PmaCI CACGTG 1 cut(s) 271
PmlI CACGTG 1 cut(s) 271
PpsI GAGTC 4 cut(s) 28, 95, 344, 1469
Ppu21I YACGTR 1 cut(s) 271
PpuMI RGGWCCY 1 cut(s) 1284
Psp124BI GAGCTC 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 1284
Psp6I CCWGG 5 cut(s) 189, 317, 353, 1023, 1209
PspCI CACGTG 1 cut(s) 271
PspFI CCCAGC 1 cut(s) 43
PspGI CCWGG 5 cut(s) 189, 317, 353, 1023, 1209
PspN4I GGNNCC 5 cut(s) 72, 302, 323, 1191, 1322
PspPI GGNCC 2 cut(s) 228, 1284
PspPPI RGGWCCY 1 cut(s) 1284
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 1 cut(s) 162
PsyI GACNNNGTC 3 cut(s) 104, 242, 437
PvuII CAGCTG 1 cut(s) 412
RsaI GTAC 8 cut(s) 80, 158, 176, 314, 455, 554, 914, 1334
RsaNI GTAC 8 cut(s) 79, 157, 175, 313, 454, 553, 913, 1333
RseI CAYNNNNRTG 2 cut(s) 809, 1340
SacI GAGCTC 1 cut(s) 1137
SalI GTCGAC 1 cut(s) 257
SapI GCTCTTC 2 cut(s) 525, 1142
SaqAI TTAA 4 cut(s) 564, 1029, 1200, 1292
SatI GCNGC 8 cut(s) 6, 62, 65, 410, 413, 673, 722, 1259
Sau3AI GATC 3 cut(s) 162, 535, 1546
Sau96I GGNCC 2 cut(s) 228, 1284
SchI GAGTC 4 cut(s) 28, 95, 344, 1469
ScrFI CCNGG 7 cut(s) 75, 76, 191, 319, 355, 1025, 1211
SduI GDGCHC 3 cut(s) 27, 75, 1137
SfaNI GCATC 1 cut(s) 1204
SfcI CTRYAG 1 cut(s) 367
Sfr274I CTCGAG 1 cut(s) 611
SinI GGWCC 1 cut(s) 1284
SlaI CTCGAG 1 cut(s) 611
SmaI CCCGGG 1 cut(s) 76
SmiMI CAYNNNNRTG 2 cut(s) 809, 1340
SmlI CTYRAG 1 cut(s) 611
SmoI CTYRAG 1 cut(s) 611
Sse9I AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
SsiI CCGC 9 cut(s) 5, 40, 62, 65, 133, 142, 304, 672, 868
SstI GAGCTC 1 cut(s) 1137
StyD4I CCNGG 7 cut(s) 73, 74, 189, 317, 353, 1023, 1209
TaaI ACNGT 7 cut(s) 290, 368, 557, 912, 1048, 1239, 1266
TaiI ACGT 4 cut(s) 96, 156, 258, 273
TaqI TCGA 5 cut(s) 258, 348, 441, 612, 1478
TasI AATT 7 cut(s) 361, 638, 885, 893, 1002, 1051, 1201
TatI WGTACW 2 cut(s) 912, 1332
TauI GCSGC 4 cut(s) 8, 64, 67, 675
TfiI GAWTC 5 cut(s) 345, 418, 607, 904, 1349
Tru1I TTAA 4 cut(s) 564, 1029, 1200, 1292
Tru9I TTAA 4 cut(s) 564, 1029, 1200, 1292
TscAI CASTG 4 cut(s) 428, 814, 1053, 1411
TseI GCWGC 4 cut(s) 409, 412, 721, 1258
TspDTI ATGAA 7 cut(s) 506, 1125, 1150, 1263, 1293, 1362, 1463
TspGWI ACGGA 3 cut(s) 94, 223, 665
TspMI CCCGGG 1 cut(s) 74
TspRI CASTG 4 cut(s) 428, 814, 1053, 1411
Tth111I GACNNNGTC 3 cut(s) 104, 242, 437
VpaK11BI GGWCC 1 cut(s) 1284
XagI CCTNNNNNAGG 2 cut(s) 212, 377
XapI RAATTY 2 cut(s) 893, 1051
XceI RCATGY 2 cut(s) 1152, 1397
XcmI CCANNNNNNNNNTGG 1 cut(s) 1432
XhoI CTCGAG 1 cut(s) 611
XmaI CCCGGG 1 cut(s) 74
XmiI GTMKAC 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 1238
Zsp2I ATGCAT 3 cut(s) 994, 1150, 1219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.